View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11873_low_8 (Length: 462)
Name: NF11873_low_8
Description: NF11873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11873_low_8 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 397; Significance: 0; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 1 - 452
Target Start/End: Complemental strand, 55082946 - 55082478
Alignment:
| Q |
1 |
attctgttgtgaagaaataaaacaagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaagtatatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55082946 |
attctgttgtgaagaaataaaacaagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaagtatatt |
55082847 |
T |
 |
| Q |
101 |
gctgtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttagccaagcagaagaggagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55082846 |
gctgtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttagccaagcagaagaggagt |
55082747 |
T |
 |
| Q |
201 |
ttggttactgtcatccatgggtggtcttacatacaacttctcgcttgaacggtcaataattaattaattagtgataacatatagcacaataggattgact |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55082746 |
ttggttactgtcatccatgggtggtcttacatacaacttctcgcttgaacggccaataattaattaattagtgataacatatagcacaataggattgact |
55082647 |
T |
 |
| Q |
301 |
agctgagacaacattcgtacatcaggaatttctttgtccattttgatctttcctcttaagtggaaatctga-----------------aatggaactata |
383 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
55082646 |
agttgagacaacattcgtacatcaggaatttctttgtccattttgatctttcctcttaagtggaaatctgaaatgagaacctaacttcaatgaaactata |
55082547 |
T |
 |
| Q |
384 |
ttcttttgaatctatctgttgttttttgcgtcgtcttagatgaccgtgtgatgaatcaaacgtcctatg |
452 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55082546 |
ttcttttgaatttatctgttgttttttgcgtcgtcttagatgaccgtgtgatgaatcaaacgtcctatg |
55082478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 38032163 - 38032412
Alignment:
| Q |
1 |
attctgttgtgaagaaataaaa-caagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaag----- |
94 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38032163 |
attctgttgtgaagaaacaaaaacaagaatgggttttcgcttacctggtattagacgatcatcatttagtgcaagtcaatcatctatcaaacaagtggaa |
38032262 |
T |
 |
| Q |
95 |
------------tatattgctgtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgctta |
182 |
Q |
| |
|
||| |||| || ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
38032263 |
gttccaaaaggctatcttgcagtgtatgttggagagaaaatgagaaggtttatgattccagtatcattcttgaatgagcctttatttcaagaattgctta |
38032362 |
T |
 |
| Q |
183 |
gccaagcagaagaggagtttggttactgtcatcc-atgggtggtcttaca |
231 |
Q |
| |
|
||||| | |||||||| || ||||| |||||||| ||||| ||||||||| |
|
|
| T |
38032363 |
gccaatctgaagaggaattcggttattgtcatccaatgggcggtcttaca |
38032412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 38038429 - 38038677
Alignment:
| Q |
1 |
attctgttgtgaagaaataaaacaagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaagt----- |
95 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
38038429 |
attctgttgtgaagaagcaaaaaaagaatgggttttcgcttacctggtattagacgatcatcatttagtgcaagtcaatcatctagcaaacaagtggaag |
38038528 |
T |
 |
| Q |
96 |
------------atattgctgtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttag |
183 |
Q |
| |
|
|| |||| || ||||||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38038529 |
tcccaaaaggccatcttgcagtgtatgttggagagaaaatgagaaggttcatgattccaatatcattcttgaatgagcctttatttcaagaattgcttag |
38038628 |
T |
 |
| Q |
184 |
ccaagcagaagaggagtttggttactgtcatcc-atgggtggtcttaca |
231 |
Q |
| |
|
|||||| |||||||| || ||||| |||||||| ||||| ||||||||| |
|
|
| T |
38038629 |
ccaagctgaagaggaattcggttattgtcatccaatgggaggtcttaca |
38038677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 38027336 - 38027585
Alignment:
| Q |
1 |
attctgttgtgaagaaataaaa-caagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaagt---- |
95 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
38027336 |
attctgttgtgaagaaacaaaaacaagaatgggttttcgcttacctgttattagaagatcatcacttagtgcaagtcaatcatctagcaaacaagtggaa |
38027435 |
T |
 |
| Q |
96 |
-------------atattgctgtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgctta |
182 |
Q |
| |
|
|| |||| || ||||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
38027436 |
gttccaaaaggccatcttgcagtgtatgttggagagaaaatgagaaggtttatgattcccgtatcattcttgaatgagcctttatttcaagaattgctta |
38027535 |
T |
 |
| Q |
183 |
gccaagcagaagaggagtttggttactgtcatcc-atgggtggtcttaca |
231 |
Q |
| |
|
||||| | |||||||| || ||||| |||||||| ||||||||||||||| |
|
|
| T |
38027536 |
gccaatctgaagaggaattcggttattgtcatccaatgggtggtcttaca |
38027585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 50913418 - 50913626
Alignment:
| Q |
41 |
tacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaagt-----------------atattgctgtttatgttggagagaaaat |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || |||| || ||||||||||||||||| |
|
|
| T |
50913418 |
tacctggtattagaagatcatcatttagtgcaagtcaatcatctagcaaagaagtggaagtcccaaaaggctatcttgcagtgtatgttggagagaaaat |
50913517 |
T |
 |
| Q |
124 |
gaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttagccaagcagaagaggagtttggttactgtcatcc-atgggt |
222 |
Q |
| |
|
|||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||| |
|
|
| T |
50913518 |
gaagaggttcttgattccaatatcattcttgaatgagcctttatttcaagaattgcttagccaagctgaagaggaatttggctactgtcatccaatgggt |
50913617 |
T |
 |
| Q |
223 |
ggtcttaca |
231 |
Q |
| |
|
||||||||| |
|
|
| T |
50913618 |
ggtcttaca |
50913626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 38034937 - 38035181
Alignment:
| Q |
1 |
attctgttgtgaagaaataaaacaagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaagt----- |
95 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||| || ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
38034937 |
attctgttctgaagaagcaaaacaagaatgggttttcgtttacctgctattagacgatcatcatttagtgcaagtcaatcatctaacaaacaagtggaag |
38035036 |
T |
 |
| Q |
96 |
------------atattgctgtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttag |
183 |
Q |
| |
|
|| |||| || |||||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38035037 |
tcccaaaaggccatcttgcggtgtatgttggagagaaaatgcgaaggttcatgattccaatatcattcttgaatgagcctttatttcaagaattgcttag |
38035136 |
T |
 |
| Q |
184 |
ccaagcagaagaggagtttggttactgtcatcc-atgggtggtct |
227 |
Q |
| |
|
|||||| |||||||| || ||||| |||||||| ||||||||||| |
|
|
| T |
38035137 |
ccaagctgaagaggaattcggttattgtcatccaatgggtggtct |
38035181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 38041830 - 38042070
Alignment:
| Q |
9 |
gtgaagaaataaaacaagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaagt------------- |
95 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| |||| |||| ||||| | ||||||| | |
|
|
| T |
38041830 |
gtgaagaaacaaaacaagaatgggttttcgcttacctggtattagacgatcatcatttactgcaggtcagtcatccagcaaacaaatggaagtcccaaaa |
38041929 |
T |
 |
| Q |
96 |
----atattgctgtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttagccaagcag |
191 |
Q |
| |
|
|| | || || |||||||||||| |||||||||||||| ||||||||||| |||| |||||||||||||| |||||||||||| | |||||||| | |
|
|
| T |
38041930 |
ggctatttagcggtgtatgttggagaggaaatgaagaggttcttgattccagtagcattcttgaatgagcctttgtttcaagaattgttgagccaagctg |
38042029 |
T |
 |
| Q |
192 |
aagaggagtttggttactgtcatc-catgggtggtcttaca |
231 |
Q |
| |
|
||||||| || ||||||||||||| ||||||||||||||| |
|
|
| T |
38042030 |
aagaggaattcggttactgtcatcaaatgggtggtcttaca |
38042070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 231
Target Start/End: Complemental strand, 50907073 - 50906835
Alignment:
| Q |
12 |
aagaaataaaacaagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaag----------------- |
94 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
50907073 |
aagaaacaaaacaagaatgggttttcgcttacctggtattagacagtcatcatttagtgcaagtcaatcgtctagcaaacaagtggacgtcccaaaaggc |
50906974 |
T |
 |
| Q |
95 |
tatattgctgtttatgtt-ggaga-gaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttagccaagcaga |
192 |
Q |
| |
|
||| |||| || |||||| ||||| ||||||| ||||||| |||||||||| ||||| ||||||||||||| ||||||||||||| | | ||||| || |
|
|
| T |
50906973 |
tattttgcggtgtatgttaggagaggaaaatg-agaggtttttgattccagtgtcattcttgaatgagccttcatttcaagaattgttgcgtcaagccga |
50906875 |
T |
 |
| Q |
193 |
agaggagtttggttactgtcatcc-atgggtggtcttaca |
231 |
Q |
| |
|
|||||| || ||||||||||||| ||||||||||||||| |
|
|
| T |
50906874 |
agaggaattccgttactgtcatccaatgggtggtcttaca |
50906835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 279 - 375
Target Start/End: Original strand, 38035286 - 38035382
Alignment:
| Q |
279 |
atatagcacaataggattgactagctgagacaacattcgtacatcaggaatttctttgtccattttgatctttcctcttaagtggaaatctgaaatg |
375 |
Q |
| |
|
|||||| |||||||||||||| | |||||||| || ||||||||| ||||| |||||| |||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
38035286 |
atataggacaataggattgaccaattgagacaatttttgtacatcagcaatttttttgtcaattttgatgtttcctcttaagtggaaatcttaaatg |
38035382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 375
Target Start/End: Original strand, 50913649 - 50913797
Alignment:
| Q |
225 |
tcttacatacaacttctcgcttgaacggtcaataattaattaattagtgataacatatagcacaataggattgactagctgagacaacattcgtacatca |
324 |
Q |
| |
|
||||||||||| |||||| ||||||| | | |||||| || || |||||||||||| | | | ||||| ||||||| |||||||| || ||||||| |
|
|
| T |
50913649 |
tcttacatacagcttctcacttgaacagactataattcatgtatgagtgataacata--ggatagtaggactgactagttgagacaagttttgtacatcg |
50913746 |
T |
 |
| Q |
325 |
ggaatttctttgtccattttgatctttcctcttaagtggaaatctgaaatg |
375 |
Q |
| |
|
| |||||||||||| |||||||| |||||||||||||||||||| ||||| |
|
|
| T |
50913747 |
gaaatttctttgtcaattttgatgcttcctcttaagtggaaatcttaaatg |
50913797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 368
Target Start/End: Original strand, 38032518 - 38032596
Alignment:
| Q |
290 |
taggattgactagctgagacaacattcgtacatcaggaatttctttgtccattttgatctttcctcttaagtggaaatc |
368 |
Q |
| |
|
|||||||||| || |||||||| || ||||||||| |||||||||||| |||||||| |||||||||| ||||||||| |
|
|
| T |
38032518 |
taggattgaccagttgagacaatttttgtacatcagaaatttctttgtcaattttgatgtttcctcttaggtggaaatc |
38032596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 368
Target Start/End: Original strand, 38038783 - 38038861
Alignment:
| Q |
290 |
taggattgactagctgagacaacattcgtacatcaggaatttctttgtccattttgatctttcctcttaagtggaaatc |
368 |
Q |
| |
|
|||||||||| || |||||||| || ||||||||| || ||||||||| |||||||| ||||||||||||| |||||| |
|
|
| T |
38038783 |
taggattgaccagttgagacaatttttgtacatcagcaacttctttgtcaattttgatgtttcctcttaagttgaaatc |
38038861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 366
Target Start/End: Original strand, 38027691 - 38027767
Alignment:
| Q |
290 |
taggattgactagctgagacaacattcgtacatcaggaatttctttgtccattttgatctttcctcttaagtggaaa |
366 |
Q |
| |
|
|||||||||| || ||||| || |||||||||||| ||||||||| || |||||||| |||||||||| ||||||| |
|
|
| T |
38027691 |
taggattgaccagttgagataattttcgtacatcagcaatttctttatcaattttgatgtttcctcttatgtggaaa |
38027767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 38035208 - 38035248
Alignment:
| Q |
225 |
tcttacatacaacttctcgcttgaacggtcaataattaatt |
265 |
Q |
| |
|
||||||||||| |||||| ||||||||||| |||||||||| |
|
|
| T |
38035208 |
tcttacatacagcttctctcttgaacggtctataattaatt |
38035248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 21608138 - 21608387
Alignment:
| Q |
1 |
attctgttgtgaagaaataaaa-caagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaagt---- |
95 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21608138 |
attctgttgtgaagaaacaaaaacaagaatgggttttcgcttacctggtattagacgatcatcatttagtgcaagtcaatcatctatcaaacaagtggaa |
21608237 |
T |
 |
| Q |
96 |
-------------atattgctgtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgctta |
182 |
Q |
| |
|
|| |||| || ||||||||||||||||||| |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21608238 |
gttccaaaaggctatcttgcagtgtatgttggagagaaaatgagaaggttcatgattccaatatcattcttgaatgagcctttatttcaagaattgctta |
21608337 |
T |
 |
| Q |
183 |
gccaagcagaagaggagtttggttactgtcatcc-atgggtggtcttaca |
231 |
Q |
| |
|
||||||| |||||||| || ||||| |||||||| ||||| ||||||||| |
|
|
| T |
21608338 |
gccaagctgaagaggaattcggttattgtcatccaatgggaggtcttaca |
21608387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 368
Target Start/End: Original strand, 21608493 - 21608571
Alignment:
| Q |
290 |
taggattgactagctgagacaacattcgtacatcaggaatttctttgtccattttgatctttcctcttaagtggaaatc |
368 |
Q |
| |
|
|||||||||| || ||||||| || ||||||||| |||||||||||| |||||||| |||||||||| || |||||| |
|
|
| T |
21608493 |
taggattgaccagttgagacattttttgtacatcagtaatttctttgtcaattttgatgtttcctcttatgttgaaatc |
21608571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 3072268 - 3072342
Alignment:
| Q |
20 |
aaacaagaatgggtttccgcttacctggtattagaagatcatcatttagtgcaagtcaatcatctatcaaacaag |
94 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
3072268 |
aaacaagaatgggttttcgcttacctggtattagacgatcatcatttagtgcaagtcaatcatctagcaaacaag |
3072342 |
T |
 |
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Target: chr4 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 204
Target Start/End: Complemental strand, 27422070 - 27421973
Alignment:
| Q |
107 |
tatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttagccaagcagaagaggagtttgg |
204 |
Q |
| |
|
||||||||||| | |||||| ||||| ||||||||||||||| ||||| | || |||||||||||||| || | ||||||||||| || ||||| |
|
|
| T |
27422070 |
tatgttggagatagaatgaaacggttcgtgattccagtatcatacttgaaccaaccattatttcaagaattactaaatcaagcagaagaagaatttgg |
27421973 |
T |
 |
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Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 27446144 - 27446248
Alignment:
| Q |
99 |
ttgctgtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttagccaagcagaagagga |
198 |
Q |
| |
|
|||| |||||||||||||| ||||||||| | || |||||||| ||||| |||||| | |||| ||||||||| | | | |||||| ||||||| || |
|
|
| T |
27446144 |
ttgcggtttatgttggagaaaaaatgaagcgatttgtgattccaacttcattattgaatcaaccttcatttcaagagtcgttaagccaatcagaagaaga |
27446243 |
T |
 |
| Q |
199 |
gtttg |
203 |
Q |
| |
|
||||| |
|
|
| T |
27446244 |
gtttg |
27446248 |
T |
 |
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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 27559378 - 27559278
Alignment:
| Q |
104 |
gtttatgttggagagaaaatgaagaggttcctgattccagtatcatttttgaatgagcctttatttcaagaattgcttagccaagcagaagaggagtttg |
203 |
Q |
| |
|
|||||||||||||| ||||||||||| || |||||||| | ||||| |||||| | ||| ||||||| | || | |||||| ||||||| ||||||| |
|
|
| T |
27559378 |
gtttatgttggagacaaaatgaagagatttctgattcctatttcattattgaatcaatcttcatttcaatagttattaagccaatcagaagaagagtttg |
27559279 |
T |
 |
| Q |
204 |
g |
204 |
Q |
| |
|
| |
|
|
| T |
27559278 |
g |
27559278 |
T |
 |
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