View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11874_low_9 (Length: 523)
Name: NF11874_low_9
Description: NF11874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11874_low_9 |
 |  |
|
| [»] scaffold0084 (1 HSPs) |
 |  |  |
|
| [»] scaffold0302 (1 HSPs) |
 |  |  |
|
| [»] scaffold0211 (1 HSPs) |
 |  |  |
|
| [»] scaffold0100 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0084 (Bit Score: 425; Significance: 0; HSPs: 1)
Name: scaffold0084
Description:
Target: scaffold0084; HSP #1
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 1 - 512
Target Start/End: Original strand, 17135 - 17645
Alignment:
| Q |
1 |
acaacactgaagggacacttggagcgcctgtgacgttcattccttttgcttctcatcatgatgatttcaatgttgggcttaacagagacttgagagttac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17135 |
acaacactgaagggacacttggagcgcctgtgaagttcattccttttgcttctcatcatgatgatttcaatgttgggcttaacagagacttgagagttac |
17234 |
T |
 |
| Q |
101 |
attccaaacatccacaagttgtgggcaatcaagagattggagattaggtgagaaagatgcaacaagtggaaggagattgattgtcgctggaggagataat |
200 |
Q |
| |
|
||||| ||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
17235 |
attcctaacatccacaagttgtgggaattcaagagattggacattaggtgagaaagatgcaacaagtggaaggagattgattgtcactggaggagataat |
17334 |
T |
 |
| Q |
201 |
agtgcaggatcacaacaacaaggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctaaagaggtgtgcccta |
300 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17335 |
ggtgcaggatcacaa---caaggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctaaagaggtgtgcccta |
17431 |
T |
 |
| Q |
301 |
gttgtaatattcaatgtgggactgttggtgttattcgtgagaatgggaagattttgttggcccttgatggtggtgcccttccagtcgttttccagaaaga |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |
|
|
| T |
17432 |
gttgtaatattcaatgtgggactgttggtgttattcgtgagaatggcaagattttgttggccctcgatggtcgtgcccttccagtcgtgttccagaaaga |
17531 |
T |
 |
| Q |
401 |
atgagtattagtgtgttggtgaagtttgttttttaatgtaataatgtttccttgttgctcactttt--aagtataaacctaatttcaataaataaacgtg |
498 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |
|
|
| T |
17532 |
atgaccattagtgtgttggtgaagtttgttttttaatgtagtaatgtttccttgttgctcacttttaaaagtagaaacctaatgtcaataaataaacgtg |
17631 |
T |
 |
| Q |
499 |
gagctattgttcat |
512 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
17632 |
gagctattgttcat |
17645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 1 - 512
Target Start/End: Complemental strand, 15177 - 14668
Alignment:
| Q |
1 |
acaacactgaagggacacttggagcgcctgtgacgttcattccttttgcttctcatcatgatgatttcaatgttgggcttaacagagacttgagagttac |
100 |
Q |
| |
|
|||||| ||||||||||||||||| | |||||| ||||| |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
15177 |
acaacagtgaagggacacttggagtggctgtgaagttcactccttttgctcctcatcatgatgatgacaatgttaggcttaacagagacttgagagttac |
15078 |
T |
 |
| Q |
101 |
attccaaacatccacaagttgtgggcaatcaagagattggagattaggtgagaaagatgcaacaagtggaaggagattgattgtcgctggaggagataat |
200 |
Q |
| |
|
||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
15077 |
attcctaacatccacaagttgtgggcagtcaacagactggagattaggtgagaaagatgctacaagtggaaggagattgattgtcactggaagagataat |
14978 |
T |
 |
| Q |
201 |
agtgcaggatcacaacaacaaggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctaaagaggtgtgcccta |
300 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14977 |
agtgcaggatcaca---acaaggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctacagaggtgtgcccta |
14881 |
T |
 |
| Q |
301 |
gttgtaatattcaatgtgggactgttggtgttattcgtgagaatgggaagattttgttggcccttgatggtggtgcccttccagtcgttttccagaaaga |
400 |
Q |
| |
|
|||||| | ||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
14880 |
attgtaagaatcaatgtggaactgttggtcttattcgcgagaatggaaagattttgttggccctcgatggtggtgcccttccagtcgtgttccagaaaga |
14781 |
T |
 |
| Q |
401 |
atga-gtattagtgtgttggtgaagtttgttttttaatgtaataatgtttccttgttgctcacttttaagtataaacctaatttcaataaataaacgtgg |
499 |
Q |
| |
|
|||| ||||| || | |||||||| |||||||| ||||||||||||||||||||||||| | ||||| ||||||| |||| | ||||||||||||||| |
|
|
| T |
14780 |
atgacctattattgggatggtgaagcttgtttttcaatgtaataatgtttccttgttgcttgcctttaattataaacataatgttaataaataaacgtgg |
14681 |
T |
 |
| Q |
500 |
agctattgttcat |
512 |
Q |
| |
|
||||||||||||| |
|
|
| T |
14680 |
agctattgttcat |
14668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0211 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: scaffold0211
Description:
Target: scaffold0211; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 510
Target Start/End: Complemental strand, 26182 - 25687
Alignment:
| Q |
1 |
acaacactgaagggacacttggagcgcctgtgacgttcattccttttgcttctcatcatgatgatttcaatgttgggcttaacagagacttgagagttac |
100 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| ||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
26182 |
acaacactgaagggacacttggagtggctgtgaagttcactccttttgctcctcatcatgatgatgacaatgttgggcttaacagagacttgagagttac |
26083 |
T |
 |
| Q |
101 |
attccaaacatccacaagttgtgggcaatcaagagattggagattaggtgagaaagatgcaacaagtggaaggagattgattgtcgctggaggagataat |
200 |
Q |
| |
|
||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| | ||| |||||||| |
|
|
| T |
26082 |
attcctaacatccacaagttgtgggcagtcaacagactggagattaggtgagaaagatgctacaagtggaaggaggttgattgtcaccggaagagataat |
25983 |
T |
 |
| Q |
201 |
agtgcaggatcacaacaacaaggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctaaagaggtgtgcccta |
300 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
25982 |
gctg---------------aaggtaacttttttaggattgtgcagacccaaactggaggtaactataacattcaatggtgtcctaaagaggtgtgcccta |
25898 |
T |
 |
| Q |
301 |
gttgtaatattcaatgtgggactgttggtgttattcgtgagaatgggaagattttgttggcccttgatggtggtgcccttccagtcgttttccagaaaga |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||| |
|
|
| T |
25897 |
gttgtaatattcaatgtgggactgttggtgttattcgtgagaatggcaagattttgttggccctcgacggtggtgcccttccagtcgtgttccagaaaga |
25798 |
T |
 |
| Q |
401 |
atga-gtattagtgtgttggtgaagtttgttttttaatgtaataatgtttccttgttgctcacttttaagtataaacctaatttcaataaataaacgtgg |
499 |
Q |
| |
|
|||| ||||| || | |||||||| |||||||| ||||||||||||||||||||||||| | ||||| |||||||||||| | ||||||||||||||| |
|
|
| T |
25797 |
atgacctattattgggatggtgaagcttgtttttcaatgtaataatgtttccttgttgcttgcctttaattataaacctaatgttaataaataaacgtgg |
25698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0100 (Bit Score: 208; Significance: 1e-113; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 1 - 431
Target Start/End: Original strand, 33925 - 34349
Alignment:
| Q |
1 |
acaacactgaagggacacttggagcgcctgtgacgttcattccttttgcttctcatcatgatgatttcaatgttgggcttaacagagacttgagagttac |
100 |
Q |
| |
|
||||||||||||| |||||||||| | |||||| ||||| |||||||||| |||| ||||||||| | ||||| |||||||||||||||||||||| || |
|
|
| T |
33925 |
acaacactgaaggaacacttggagtggctgtgaagttcactccttttgctcctcaacatgatgatgacgatgttaggcttaacagagacttgagagtaac |
34024 |
T |
 |
| Q |
101 |
attccaaacatccacaagttgtgggcaatcaagagattggagattaggtgagaaagatgcaacaagtggaaggagattgattgtcgctggaggagataat |
200 |
Q |
| |
|
||||| ||| ||||||||||||||||| |||| ||| |||||||| || |||||||||||||| ||||||||||| |||||||| | ||| ||||||| |
|
|
| T |
34025 |
attcctaacctccacaagttgtgggcagtcaacagactggagattgggcgagaaagatgcaacgagtggaaggaggttgattgttaccggaagagataac |
34124 |
T |
 |
| Q |
201 |
agtgcaggatcacaacaacaaggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctaaagaggtgtgcccta |
300 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| |||||| |||| | |||||||||||| |||||||||| ||||| || || | |
|
|
| T |
34125 |
ggtgcaggatcacaa------ggtaacttttttaggattgtgcagactcaaactggtggtacctataacattcagtggtgccctacagaggcttgtccaa |
34218 |
T |
 |
| Q |
301 |
gttgtaatattcaatgtgggactgttggtgttattcgtgagaatgggaagattttgttggcccttgatggtggtgcccttccagtcgttttccagaaaga |
400 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||| |||||||| |||| | |||||||||||||||||| |||||||||||| || ||||||||||| |
|
|
| T |
34219 |
gttgtaaggtacaatgtgggactgttggtgttattcgcgagaatggcaagaatctgttggcccttgatggtgatgcccttccagttgtgttccagaaaga |
34318 |
T |
 |
| Q |
401 |
atgagtattagtgtgttggtgaagtttgttt |
431 |
Q |
| |
|
|||| |||||||| | ||||||||||||||| |
|
|
| T |
34319 |
atgattattagtgggatggtgaagtttgttt |
34349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 177; Significance: 4e-95; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 76 - 431
Target Start/End: Original strand, 4286749 - 4287098
Alignment:
| Q |
76 |
ggcttaacagagacttgagagttacattccaaacatccacaagttgtgggcaatcaagagattggagattaggtgagaaagatgcaacaagtggaaggag |
175 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| | |||| |||||||||| || | ||||||||| || |||||||| || ||||| ||||||||||| |
|
|
| T |
4286749 |
ggcttaacagagacttgagagtaacattccaaggtttcacaggttgtgggcagtcgacagattggaggttgggtgagaaggacgcaacgagtggaaggag |
4286848 |
T |
 |
| Q |
176 |
attgattgtcgctggaggagataatagtgcaggatcacaacaacaaggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaa |
275 |
Q |
| |
|
||||||| | ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |
|
|
| T |
4286849 |
gctgattgttaccggaagagataatggtgcaggatcacat------ggtaacttttttaggattgtgcagacccaaactggtggtatctataacattcaa |
4286942 |
T |
 |
| Q |
276 |
tggtgccctaaagaggtgtgccctagttgtaatattcaatgtgggactgttggtgttattcgtgagaatgggaagattttgttggcccttgatggtggtg |
375 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
4286943 |
tggtgccctacagaggcgtgccctagttgtaaggttcaatgtgggactgttggtgttattcgtgagaatggcaagattctgttggcccttgatggtggtg |
4287042 |
T |
 |
| Q |
376 |
cccttccagtcgttttccagaaagaatgagtattagtgtgttggtgaagtttgttt |
431 |
Q |
| |
|
|||||||||| || ||||||||||||||| ||||| | ||||||||||||||| |
|
|
| T |
4287043 |
cccttccagttgtgttccagaaagaatgattattaatacaatggtgaagtttgttt |
4287098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 2 - 412
Target Start/End: Original strand, 4295140 - 4295550
Alignment:
| Q |
2 |
caacactgaagggacacttggagcgcctgtgacgttcattccttttgcttctcatcatgatgatttcaatgttg------ggcttaacagagacttgaga |
95 |
Q |
| |
|
||||| ||||||||||||||||| | |||||| |||| |||||| ||| ||| |||||||||| ||| || |||||||||||||||||||| |
|
|
| T |
4295140 |
caacagtgaagggacacttggagtggctgtgaaattcactcctttcgctcctcgtcatgatgatgatgatgatgatgtgaggcttaacagagacttgaga |
4295239 |
T |
 |
| Q |
96 |
gttacattccaaacatccacaagttgtgggcaatcaagagattggagattaggtgagaaagatgcaacaagtggaaggagattgattgtcgctggaggag |
195 |
Q |
| |
|
|| ||||||||| | |||| |||||||||| || | ||||||||| || |||||||| || ||||| ||||||||||| ||||||| | ||| ||| |
|
|
| T |
4295240 |
gtaacattccaaggtttcacaggttgtgggcagtcgacagattggaggttgggtgagaaggacgcaacgagtggaaggaggctgattgttaccggaagag |
4295339 |
T |
 |
| Q |
196 |
ataatagtgcaggatcacaacaacaaggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctaaagaggtgtg |
295 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||| ||| |
|
|
| T |
4295340 |
ataatggtgcaggatcacat------ggtaacttttttaggattgtgcagacccaaactggtggtatctataacattcaatggtgccctacagaggcgtg |
4295433 |
T |
 |
| Q |
296 |
ccctagttgtaatattcaatgtgggactgttggtgttattcgtgagaatgggaagattttgttggcccttgatggtggtgcccttccagtcgttttccag |
395 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
4295434 |
ccctagttgtaaggttcaatgtgggactgttggtgttattcgtgagaatggcaagattcttttggcgcttgatggtggtgcccttcctgtcgtgttccag |
4295533 |
T |
 |
| Q |
396 |
aaagaatgagtattagt |
412 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
4295534 |
aaagaatgattattagt |
4295550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 411
Target Start/End: Original strand, 44442939 - 44443131
Alignment:
| Q |
222 |
ggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctaaagaggtgtgccctagttgtaatattcaatgtggga |
321 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||| ||| | ||||||||| ||||||||||||| ||| ||||||||||| ||| || ||||||||| |
|
|
| T |
44442939 |
ggtaacttctttaggattgtgcagagccaaactcttggtatctataacatccaatggtgccctagagaagtgtgccctagctgttggtttgaatgtggga |
44443038 |
T |
 |
| Q |
322 |
ctgttggtgttattcgtgagaatgggaagattttgttggcccttgat---ggtggtgcccttccagtcgttttccagaaagaatgagtattag |
411 |
Q |
| |
|
|| ||||| |||||||||||||||| |||| ||| |||||||||||| |||| |||||| || || || ||||||||||||||| |||||| |
|
|
| T |
44443039 |
ctattggtattattcgtgagaatggcaagagtttattggcccttgatgggggtgatgccctccctgttgtgttccagaaagaatgattattag |
44443131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 222 - 382
Target Start/End: Complemental strand, 21403841 - 21403681
Alignment:
| Q |
222 |
ggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctaaagaggtgtgccctagttgtaatattcaatgtggga |
321 |
Q |
| |
|
|||||||| |||||||||||||| || | || ||| || | || |||||| |||||||| |||| ||||||||| || |||||||| || ||||||||| |
|
|
| T |
21403841 |
ggtaacttctttaggattgtgcaaactccaagtagaggtatctttaacatccaatggtgtcctacagaggtgtgtccaagttgtaagtttgaatgtggga |
21403742 |
T |
 |
| Q |
322 |
ctgttggtgttattcgtgagaatgggaagattttgttggcccttgatggtggtgcccttcc |
382 |
Q |
| |
|
|||||||| || ||||||||||||| |||||| |||| || |||||||| |||||||||| |
|
|
| T |
21403741 |
ctgttggtattgttcgtgagaatggtaagattctgttagctcttgatggcagtgcccttcc |
21403681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 222 - 382
Target Start/End: Complemental strand, 21798333 - 21798173
Alignment:
| Q |
222 |
ggtaacttttttaggattgtgcagacccaaactagtggcaactataacattcaatggtgccctaaagaggtgtgccctagttgtaatattcaatgtggga |
321 |
Q |
| |
|
|||||||| |||||||||||||| || | || ||| || | || |||||| |||||||| |||| ||||||||| || |||||||| || ||||||||| |
|
|
| T |
21798333 |
ggtaacttctttaggattgtgcaaactccaagtagaggtatctttaacatccaatggtgtcctacagaggtgtgtccaagttgtaagtttgaatgtggga |
21798234 |
T |
 |
| Q |
322 |
ctgttggtgttattcgtgagaatgggaagattttgttggcccttgatggtggtgcccttcc |
382 |
Q |
| |
|
|||||||| || ||||||||||||| |||||| |||| || |||||||| |||||||||| |
|
|
| T |
21798233 |
ctgttggtattgttcgtgagaatggtaagattctgttagctcttgatggcagtgcccttcc |
21798173 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 21370560 - 21370453
Alignment:
| Q |
263 |
ctataacattcaatggtgccctaaagaggtgtgccctagttgtaatattcaatgtgggactgttggtgttattcgtgagaatgggaagattttgttggcc |
362 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||| || | |||||| || ||||||||||||||||| || ||||||||||||| |||||||||||||| |
|
|
| T |
21370560 |
ctataacattcaatggtgccctacagaagtgtgtcccaattgtaagtttgaatgtgggactgttggtattgttcgtgagaatggtaagattttgttggct |
21370461 |
T |
 |
| Q |
363 |
cttgatgg |
370 |
Q |
| |
|
|||||||| |
|
|
| T |
21370460 |
cttgatgg |
21370453 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 157
Target Start/End: Complemental strand, 21934643 - 21934556
Alignment:
| Q |
70 |
atgttgggcttaacagagacttgagagttacattccaaacatccacaagttgtgggcaatcaagagattggagattaggtgagaaaga |
157 |
Q |
| |
|
||||| || ||||||||||||||||| | ||||||||| | || ||||||||| ||||||| ||| |||||||||||||||||||| |
|
|
| T |
21934643 |
atgttagggttaacagagacttgagaataacattccaagcttcatcaagttgtgtacaatcaacagaatggagattaggtgagaaaga |
21934556 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 264 - 402
Target Start/End: Complemental strand, 21934452 - 21934314
Alignment:
| Q |
264 |
tataacattcaatggtgccctaaagaggtgtgccctagttgtaatattcaatgtgggactgttggtgttattcgtgagaatgggaagattttgttggccc |
363 |
Q |
| |
|
||||| || |||||||| |||| |||||| || || |||||||| || ||||||| ||||||| | | | ||||||||| |||||||||||||||| |
|
|
| T |
21934452 |
tataatatacaatggtgtcctacagaggtatgtccaagttgtaaatttgaatgtggaactgttgatatgttgaatgagaatggtaagattttgttggccc |
21934353 |
T |
 |
| Q |
364 |
ttgatggtggtgcccttccagtcgttttccagaaagaat |
402 |
Q |
| |
|
| ||||||||| |||| || | |||||||||||||||| |
|
|
| T |
21934352 |
tagatggtggtcccctccctcttgttttccagaaagaat |
21934314 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 178
Target Start/End: Complemental strand, 21370744 - 21370642
Alignment:
| Q |
76 |
ggcttaacagagacttgagagttacattccaaacatccacaagttgtgggcaatcaagagattggagattaggtgagaaagatgcaacaagtggaaggag |
175 |
Q |
| |
|
|||||||||||||||| | ||| | ||||||| | ||||| |||||| ||||||| ||| |||| ||| ||||||| || ||||||| ||||||||| |
|
|
| T |
21370744 |
ggcttaacagagacttaaaagtgatattccaagcttccacggcttgtggacaatcaacagaatggaaattgggtgagagggacgcaacaactggaaggag |
21370645 |
T |
 |
| Q |
176 |
att |
178 |
Q |
| |
|
||| |
|
|
| T |
21370644 |
att |
21370642 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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