View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11876_low_9 (Length: 303)

Name: NF11876_low_9
Description: NF11876
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11876_low_9
NF11876_low_9
[»] chr5 (36 HSPs)
chr5 (7-300)||(23338898-23339190)
chr5 (217-303)||(25400746-25400832)
chr5 (217-300)||(23387555-23387638)
chr5 (221-303)||(19003777-19003859)
chr5 (209-300)||(29987962-29988054)
chr5 (209-300)||(20860345-20860436)
chr5 (218-297)||(34132095-34132174)
chr5 (219-294)||(28666504-28666579)
chr5 (220-278)||(17469569-17469627)
chr5 (210-299)||(24320522-24320612)
chr5 (209-267)||(19761581-19761639)
chr5 (209-259)||(23214825-23214875)
chr5 (212-278)||(24162014-24162080)
chr5 (211-300)||(22797422-22797511)
chr5 (217-278)||(34488885-34488946)
chr5 (218-270)||(15691304-15691356)
chr5 (217-292)||(24658307-24658383)
chr5 (209-269)||(25572478-25572538)
chr5 (209-300)||(19053107-19053198)
chr5 (218-269)||(26117474-26117525)
chr5 (209-249)||(17831750-17831790)
chr5 (217-269)||(18832259-18832311)
chr5 (209-249)||(18939577-18939617)
chr5 (209-249)||(20548453-20548493)
chr5 (209-249)||(21352972-21353012)
chr5 (209-269)||(23266853-23266913)
chr5 (217-249)||(24263758-24263790)
chr5 (217-249)||(24513204-24513236)
chr5 (209-269)||(31600075-31600135)
chr5 (207-278)||(23110194-23110265)
chr5 (219-293)||(25920844-25920918)
chr5 (211-269)||(26348479-26348537)
chr5 (208-249)||(24142464-24142505)
chr5 (205-269)||(24188935-24189000)
chr5 (218-259)||(26253539-26253580)
chr5 (221-269)||(26069286-26069334)
[»] chr2 (27 HSPs)
chr2 (209-303)||(25886191-25886285)
chr2 (208-298)||(26313186-26313276)
chr2 (209-294)||(21905738-21905823)
chr2 (221-300)||(18758307-18758386)
chr2 (218-293)||(23010052-23010127)
chr2 (217-299)||(22569061-22569143)
chr2 (219-300)||(28918194-28918275)
chr2 (209-268)||(16157084-16157143)
chr2 (209-303)||(17350981-17351075)
chr2 (209-303)||(35680100-35680194)
chr2 (209-278)||(17891759-17891828)
chr2 (218-299)||(27540274-27540355)
chr2 (217-300)||(24086314-24086397)
chr2 (209-272)||(29144669-29144732)
chr2 (217-297)||(34574522-34574603)
chr2 (209-249)||(25537613-25537653)
chr2 (217-272)||(27907530-27907585)
chr2 (221-269)||(29717369-29717418)
chr2 (211-251)||(28766907-28766947)
chr2 (209-257)||(32130699-32130747)
chr2 (209-269)||(32137912-32137972)
chr2 (209-257)||(32139334-32139382)
chr2 (218-249)||(18120554-18120585)
chr2 (209-251)||(25922660-25922702)
chr2 (218-268)||(29892228-29892278)
chr2 (220-268)||(25882581-25882629)
chr2 (209-249)||(34369380-34369420)
[»] chr8 (49 HSPs)
chr8 (209-300)||(28621610-28621701)
chr8 (209-299)||(20400341-20400431)
chr8 (208-300)||(13313270-13313362)
chr8 (223-300)||(24090892-24090969)
chr8 (209-300)||(29765391-29765483)
chr8 (217-300)||(15176440-15176523)
chr8 (217-300)||(17510910-17510993)
chr8 (209-300)||(19704992-19705083)
chr8 (206-300)||(24583168-24583262)
chr8 (209-300)||(29380960-29381052)
chr8 (209-280)||(17100206-17100277)
chr8 (209-269)||(14271878-14271938)
chr8 (209-300)||(23867829-23867920)
chr8 (208-300)||(24389762-24389854)
chr8 (206-278)||(30117655-30117727)
chr8 (209-268)||(21695413-21695472)
chr8 (218-269)||(24380362-24380413)
chr8 (217-295)||(18446867-18446945)
chr8 (209-251)||(21316838-21316880)
chr8 (209-303)||(26888489-26888583)
chr8 (208-249)||(19265879-19265920)
chr8 (209-269)||(6286319-6286379)
chr8 (209-257)||(18836841-18836889)
chr8 (206-278)||(22501861-22501933)
chr8 (209-269)||(24908941-24909001)
chr8 (209-269)||(24911162-24911222)
chr8 (208-300)||(25481504-25481596)
chr8 (217-300)||(26139794-26139877)
chr8 (226-300)||(24520019-24520093)
chr8 (223-293)||(34499241-34499311)
chr8 (208-249)||(6886727-6886768)
chr8 (206-251)||(18829379-18829424)
chr8 (217-270)||(24381994-24382047)
chr8 (217-261)||(17976276-17976320)
chr8 (221-269)||(28903979-28904027)
chr8 (209-268)||(5151957-5152016)
chr8 (209-264)||(25227301-25227356)
chr8 (218-249)||(26829475-26829506)
chr8 (209-267)||(4007151-4007209)
chr8 (221-259)||(13833615-13833653)
chr8 (209-259)||(17650008-17650058)
chr8 (208-270)||(24105515-24105577)
chr8 (209-247)||(24381325-24381363)
chr8 (219-249)||(28275334-28275364)
chr8 (224-269)||(15058519-15058564)
chr8 (217-269)||(17835580-17835632)
chr8 (221-269)||(18007573-18007620)
chr8 (209-249)||(18570549-18570589)
chr8 (209-269)||(28858873-28858932)
[»] chr1 (44 HSPs)
chr1 (208-303)||(729139-729234)
chr1 (208-300)||(15542307-15542399)
chr1 (209-300)||(21663090-21663181)
chr1 (217-303)||(12210268-12210354)
chr1 (206-300)||(18527493-18527587)
chr1 (209-297)||(14782539-14782627)
chr1 (209-290)||(27973319-27973400)
chr1 (209-300)||(18827402-18827493)
chr1 (209-299)||(18832222-18832312)
chr1 (221-300)||(22507393-22507473)
chr1 (209-300)||(21450773-21450864)
chr1 (209-300)||(26611331-26611422)
chr1 (209-294)||(15158788-15158873)
chr1 (209-301)||(25402435-25402527)
chr1 (209-269)||(26647357-26647417)
chr1 (218-293)||(27116232-27116307)
chr1 (218-293)||(28009759-28009834)
chr1 (221-259)||(16114847-16114885)
chr1 (218-278)||(24901237-24901297)
chr1 (209-269)||(33192389-33192449)
chr1 (209-300)||(18734585-18734676)
chr1 (209-300)||(22426515-22426606)
chr1 (209-256)||(24464664-24464711)
chr1 (218-268)||(14235293-14235343)
chr1 (209-267)||(22621832-22621890)
chr1 (218-259)||(7221563-7221604)
chr1 (208-269)||(9782978-9783039)
chr1 (209-269)||(11845221-11845281)
chr1 (207-247)||(22626152-22626192)
chr1 (209-257)||(27912113-27912161)
chr1 (224-295)||(16180728-16180799)
chr1 (209-300)||(21333071-21333162)
chr1 (219-269)||(15571698-15571748)
chr1 (219-269)||(16363660-16363710)
chr1 (211-249)||(26022442-26022480)
chr1 (208-269)||(35133921-35133982)
chr1 (209-258)||(44797166-44797215)
chr1 (209-249)||(9403681-9403721)
chr1 (209-249)||(15526806-15526846)
chr1 (209-257)||(15630933-15630981)
chr1 (220-300)||(16785612-16785692)
chr1 (209-249)||(16817108-16817148)
chr1 (217-257)||(21536914-21536954)
chr1 (219-259)||(26581620-26581660)
[»] chr7 (47 HSPs)
chr7 (209-301)||(26249075-26249167)
chr7 (218-295)||(8977479-8977556)
chr7 (208-300)||(13280765-13280857)
chr7 (208-300)||(4450677-4450769)
chr7 (208-303)||(2565909-2566004)
chr7 (209-300)||(3585522-3585613)
chr7 (209-300)||(11804704-11804795)
chr7 (219-297)||(18986754-18986832)
chr7 (219-297)||(19001382-19001460)
chr7 (209-303)||(23173685-23173779)
chr7 (218-295)||(5236875-5236952)
chr7 (209-300)||(3173716-3173807)
chr7 (209-303)||(9078881-9078976)
chr7 (209-300)||(39270273-39270363)
chr7 (208-278)||(9767813-9767883)
chr7 (219-300)||(8052439-8052519)
chr7 (219-300)||(10611719-10611800)
chr7 (209-279)||(19201322-19201392)
chr7 (65-206)||(8314767-8314908)
chr7 (209-269)||(10332441-10332501)
chr7 (209-300)||(19201464-19201555)
chr7 (218-269)||(21707346-21707397)
chr7 (219-269)||(9722478-9722528)
chr7 (209-249)||(2927931-2927971)
chr7 (209-249)||(19154875-19154915)
chr7 (209-249)||(20754274-20754314)
chr7 (211-278)||(3692762-3692829)
chr7 (206-249)||(4900336-4900379)
chr7 (212-278)||(14195776-14195842)
chr7 (207-268)||(1254694-1254754)
chr7 (209-249)||(1767433-1767473)
chr7 (209-257)||(1810953-1811001)
chr7 (209-249)||(2506820-2506860)
chr7 (217-269)||(3736373-3736425)
chr7 (217-249)||(13252715-13252747)
chr7 (209-257)||(17887730-17887778)
chr7 (208-247)||(4994786-4994825)
chr7 (218-269)||(6039306-6039357)
chr7 (209-248)||(10414279-10414318)
chr7 (219-257)||(2505892-2505930)
chr7 (219-269)||(9288947-9288997)
chr7 (219-269)||(9298739-9298789)
chr7 (219-257)||(44192371-44192409)
chr7 (209-269)||(1589276-1589337)
chr7 (218-250)||(10584116-10584148)
chr7 (209-249)||(13287710-13287750)
chr7 (217-249)||(16055264-16055296)
[»] chr6 (43 HSPs)
chr6 (207-303)||(24480027-24480123)
chr6 (209-295)||(14641643-14641729)
chr6 (210-300)||(24469804-24469894)
chr6 (209-300)||(17384029-17384120)
chr6 (218-300)||(17822032-17822115)
chr6 (209-303)||(22404254-22404348)
chr6 (219-303)||(14723687-14723771)
chr6 (209-300)||(1636640-1636730)
chr6 (211-270)||(26820896-26820955)
chr6 (209-303)||(17847783-17847877)
chr6 (218-268)||(27961252-27961302)
chr6 (217-278)||(22564557-22564618)
chr6 (209-293)||(8038050-8038134)
chr6 (209-293)||(14076409-14076493)
chr6 (228-303)||(21152510-21152585)
chr6 (209-291)||(4340679-4340761)
chr6 (234-300)||(19577562-19577628)
chr6 (209-299)||(21760407-21760497)
chr6 (209-278)||(21687129-21687198)
chr6 (209-269)||(14727171-14727231)
chr6 (220-300)||(22845862-22845942)
chr6 (210-278)||(23644318-23644386)
chr6 (209-269)||(30356300-30356360)
chr6 (219-293)||(9519745-9519819)
chr6 (219-293)||(9841032-9841106)
chr6 (217-259)||(23087115-23087157)
chr6 (208-293)||(9848176-9848261)
chr6 (209-293)||(21932487-21932572)
chr6 (217-300)||(21845736-21845820)
chr6 (218-265)||(9338987-9339034)
chr6 (207-249)||(9387605-9387647)
chr6 (219-268)||(13216314-13216364)
chr6 (219-249)||(17379470-17379500)
chr6 (218-303)||(2588299-2588384)
chr6 (209-293)||(14078050-14078135)
chr6 (209-278)||(19246304-19246373)
chr6 (208-249)||(20080770-20080811)
chr6 (219-272)||(21036964-21037017)
chr6 (208-249)||(24389169-24389210)
chr6 (209-269)||(17295704-17295764)
chr6 (209-249)||(18171253-18171293)
chr6 (209-300)||(19593975-19594067)
chr6 (217-249)||(31878856-31878888)
[»] chr3 (38 HSPs)
chr3 (209-301)||(19912585-19912677)
chr3 (208-300)||(12517296-12517388)
chr3 (209-300)||(16242194-16242284)
chr3 (209-300)||(34276437-34276528)
chr3 (217-299)||(12771210-12771292)
chr3 (217-278)||(52935541-52935602)
chr3 (209-269)||(7805779-7805839)
chr3 (212-300)||(8145254-8145342)
chr3 (219-299)||(8765681-8765761)
chr3 (219-299)||(8770571-8770651)
chr3 (209-269)||(20886905-20886965)
chr3 (209-300)||(13938846-13938937)
chr3 (209-300)||(18457111-18457202)
chr3 (221-295)||(12372344-12372418)
chr3 (209-278)||(22470402-22470471)
chr3 (217-269)||(819854-819906)
chr3 (220-300)||(8115305-8115385)
chr3 (217-269)||(22450486-22450538)
chr3 (208-300)||(25850947-25851039)
chr3 (209-269)||(31283903-31283963)
chr3 (209-300)||(1096761-1096851)
chr3 (209-269)||(18535807-18535867)
chr3 (217-269)||(20891653-20891705)
chr3 (218-278)||(22247025-22247084)
chr3 (209-300)||(2166035-2166125)
chr3 (218-269)||(2508728-2508779)
chr3 (209-249)||(16228344-16228384)
chr3 (209-243)||(18735301-18735335)
chr3 (219-269)||(21740516-21740566)
chr3 (209-259)||(26092952-26093002)
chr3 (217-278)||(3114717-3114778)
chr3 (230-279)||(19170162-19170211)
chr3 (209-249)||(19533829-19533869)
chr3 (209-249)||(20021817-20021857)
chr3 (221-257)||(25530743-25530779)
chr3 (217-249)||(27074009-27074041)
chr3 (209-249)||(27412658-27412698)
chr3 (209-269)||(27852603-27852663)
[»] chr4 (34 HSPs)
chr4 (209-300)||(15166474-15166565)
chr4 (222-300)||(7583798-7583876)
chr4 (209-300)||(17335355-17335446)
chr4 (209-300)||(22171754-22171845)
chr4 (217-303)||(11782495-11782581)
chr4 (218-299)||(8968080-8968161)
chr4 (210-291)||(9536756-9536837)
chr4 (205-272)||(19556537-19556603)
chr4 (209-295)||(12616725-12616811)
chr4 (209-278)||(25025134-25025203)
chr4 (220-303)||(10106298-10106381)
chr4 (209-300)||(17711312-17711403)
chr4 (209-269)||(9849707-9849767)
chr4 (209-269)||(17434471-17434531)
chr4 (209-300)||(11252129-11252220)
chr4 (217-300)||(17218535-17218617)
chr4 (219-269)||(13588745-13588795)
chr4 (221-269)||(16669733-16669781)
chr4 (219-257)||(12836080-12836118)
chr4 (237-303)||(16928927-16928993)
chr4 (219-269)||(19883522-19883572)
chr4 (221-269)||(9054042-9054090)
chr4 (209-249)||(17277902-17277942)
chr4 (209-249)||(19666949-19666989)
chr4 (222-278)||(20828152-20828208)
chr4 (209-247)||(4617153-4617191)
chr4 (221-303)||(9263362-9263444)
chr4 (219-269)||(15047804-15047854)
chr4 (219-269)||(15106570-15106620)
chr4 (238-303)||(10432181-10432246)
chr4 (208-257)||(19335224-19335273)
chr4 (209-257)||(8928313-8928361)
chr4 (207-247)||(10239725-10239765)
chr4 (209-249)||(19919139-19919179)
[»] scaffold0016 (1 HSPs)
scaffold0016 (217-300)||(4830-4913)
[»] scaffold0043 (1 HSPs)
scaffold0043 (209-278)||(88436-88505)
[»] scaffold0014 (1 HSPs)
scaffold0014 (209-300)||(192128-192219)
[»] scaffold0056 (1 HSPs)
scaffold0056 (209-300)||(23042-23133)
[»] scaffold0555 (1 HSPs)
scaffold0555 (221-303)||(6456-6538)
[»] scaffold0258 (1 HSPs)
scaffold0258 (209-300)||(20252-20343)
[»] scaffold0115 (1 HSPs)
scaffold0115 (221-269)||(36143-36191)
[»] scaffold0019 (2 HSPs)
scaffold0019 (221-269)||(35215-35263)
scaffold0019 (218-269)||(24839-24890)
[»] scaffold0451 (1 HSPs)
scaffold0451 (208-303)||(5733-5828)
[»] scaffold0386 (2 HSPs)
scaffold0386 (218-269)||(4881-4932)
scaffold0386 (218-269)||(13483-13534)
[»] scaffold0111 (1 HSPs)
scaffold0111 (209-300)||(21446-21537)
[»] scaffold0032 (1 HSPs)
scaffold0032 (221-279)||(92840-92898)
[»] scaffold0072 (1 HSPs)
scaffold0072 (209-268)||(38329-38388)
[»] scaffold0094 (1 HSPs)
scaffold0094 (227-269)||(12267-12309)
[»] scaffold0871 (1 HSPs)
scaffold0871 (210-247)||(4017-4054)
[»] scaffold0024 (1 HSPs)
scaffold0024 (209-278)||(41367-41435)
[»] scaffold0637 (1 HSPs)
scaffold0637 (205-269)||(7423-7487)
[»] scaffold0002 (1 HSPs)
scaffold0002 (240-300)||(95630-95690)


Alignment Details
Target: chr5 (Bit Score: 250; Significance: 1e-139; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 7 - 300
Target Start/End: Complemental strand, 23339190 - 23338898
Alignment:
Q  7 actatgtccgtcaagagtttgaaattttgcacctcgacttgtacattgaataacactccttccggttcatgtagtgttccatcagccacccccacaagct 106  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23339190 actatgtccgtcaagagtttgaaattttccacctcgacttgcacattgaataacactccttccggttcgtgtagtgttccatcagccacccccacaagct 23339091  T
Q  107 ttttagctggagtcgtccttaatcctccgatcttttttaacgtttctattgacatcaggatgatgttggaccctaaattacataaagcgtccccaagaaa 206  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  23339090 ttttagctggagtcgtccttaatccttcgatcttttttaacgtttctattgacatcaggatgatgttggaccctaaattacataaagcgtccccaataag 23338991  T
Q  207 tatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
     |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23338990 catgatgacaggtcatcttaggttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaaga-tattagaacgattg 23338898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 25400746 - 25400832
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | || |||||||||||||||||    
T  25400746 ggtcattttacgttattcttagcatgtttttcagtcattttcattaggttttagcaggaaaaaggaggaatattagaacgattgtct 25400832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 23387555 - 23387638
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||| ||||| ||||||| |||||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||||||||    
T  23387555 ggtcgtcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattg 23387638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 19003777 - 19003859
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||||||||||| |||||||||||| | ||||||| ||||||||||||| |||||| | |||||||||||| |||||||    
T  19003777 atcttacgttattcttggcatgtttttcagttattttcagtaggttttagcagcaaaaaggatgagtattagaacaattgtct 19003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 29988054 - 29987962
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcag-aaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||||| | ||| ||||||||| |||||||   |||||||||||||||||    
T  29988054 tgatgacaggtcatcttacgttatttttagcatgtttttcagtcatttttagtagattttagcagcaaaaaaggtggagtattagaacgattg 29987962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 20860436 - 20860345
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||||| | ||||||||||||||| | ||||||| ||||||||||||| |||||| |  ||||||||||| ||||    
T  20860436 tgatgacaggtcatcttacgttactgttagcatgtttttcattaattttcagtaggttttagcagcaaaaaggagaagtattagaacaattg 20860345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 34132174 - 34132095
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacga 297  Q
    |||||||||| |||||||||||||||||||||   ||||||||||||||||||||| |||||| |  |||||||||||||    
T  34132174 gtcatcttactttattcttagcatgtttttcagctattttcattaggttttagcagcaaaaaggagaagtattagaacga 34132095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 28666579 - 28666504
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaa 294  Q
    |||||||| |||||||||| ||||||||||| ||||||||| ||||||||||||| |||||| |  ||||||||||    
T  28666579 tcatcttatgttattcttatcatgtttttcattcattttcagtaggttttagcagcaaaaaggagaagtattagaa 28666504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 278
Target Start/End: Original strand, 17469569 - 17469627
Alignment:
Q  220 catcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||    
T  17469569 catcttacgttattcttagcatgtttttcaatcattttcagcaggttttaccagcaaaa 17469627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 24320522 - 24320612
Alignment:
Q  210 gatgaccggtcatcttacgttattcttagcatg-tttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    |||||| ||||||||||||||||||||| |||| ||||| | ||||||||| ||||||||||||| ||||||   ||||||||| ||||||    
T  24320522 gatgacaggtcatcttacgttattcttaacatgtttttttattcattttcagtaggttttagcagcaaaaaggcggagtattagcacgatt 24320612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 19761581 - 19761639
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttt 267  Q
    ||||||| ||||||||||||||||| |||||||||| |||| ||||||||| |||||||    
T  19761581 tgatgacaggtcatcttacgttattattagcatgttattcagtcattttcagtaggttt 19761639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 23214825 - 23214875
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttca 259  Q
    ||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  23214825 tgatgacaggtcatcttacgttattcttagcatgtttttcagttattttca 23214875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 24162014 - 24162080
Alignment:
Q  212 tgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||||| ||| ||||| ||| ||||    
T  24162014 tgacaggtcattttacgttattcttagcatgtttttcagtcattttcaatagattttaccagcaaaa 24162080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 22797422 - 22797511
Alignment:
Q  211 atgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||| ||||||||||||||||| || |||||||||||| ||||||||  |||||||||  || |||||| |  ||||||||| ||||||    
T  22797422 atgacaggtcatcttacgttattattcgcatgtttttcagtcattttcgataggttttattagcaaaaaggagaagtattagagcgattg 22797511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 34488946 - 34488885
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||||||||||||||||||||||||||||||| ||||||| | |||| |||| ||| ||||    
T  34488946 ggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggatttaccagcaaaa 34488885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 15691356 - 15691304
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttag 270  Q
    |||||||||||||||||||||||| ||||| | ||||||||| ||||||||||    
T  15691356 gtcatcttacgttattcttagcatattttttagtcattttcagtaggttttag 15691304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 24658307 - 24658383
Alignment:
Q  217 ggtcatcttacgttattcttagcat-gtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattag 292  Q
    ||||||||||||||||| ||| | | |||||||||||||||| | ||||||||||||| |||||| | |||||||||    
T  24658307 ggtcatcttacgttatttttaactttgtttttcaatcatttttagtaggttttagcagcaaaaaggaggagtattag 24658383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 25572478 - 25572538
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||  |||||| ||||||||||||||||||||||||| ||| ||||| |||||||||    
T  25572478 tgatgacaagtcatcctacgttattcttagcatgtttttcagtcaatttcagtaggtttta 25572538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 19053198 - 19053107
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||  ||||| |||||||||||||||||||||| ||| | ||||||| ||| ||||  ||| |||||| | |||||||||||| ||||    
T  19053198 tgatgacatgtcattttacgttattcttagcatgtttatcagttattttcagtagatttttacagcaaaaaggaggagtattagaacaattg 19053107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 26117525 - 26117474
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||| ||||||||||||||||||| |||||||||||  ||||||||    
T  26117525 gtcatcttacattattcttagcatgttttttaatcattttcagcaggtttta 26117474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 17831790 - 17831750
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  17831790 tgatgacatgtcatcttacgttattcttagcatgtttttca 17831750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 18832311 - 18832259
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||| ||||| ||||||||||||||| || |||||| |||||||||    
T  18832311 ggtcatcttacattatttttagcatgtttttcagtctttttcaataggtttta 18832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 18939617 - 18939577
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  18939617 tgatgacaggtcatcttacgttattcttaacatgtttttca 18939577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 20548453 - 20548493
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  20548453 tgatgacaggtcatcttacgttattcctagcatgtttttca 20548493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 21353012 - 21352972
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  21353012 tgatgacaggtcatcttatgttattcttagcatgtttttca 21352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 23266913 - 23266853
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| ||||||||||| ||||| || |||||||||| | ||||||||| |||||||||    
T  23266913 tgatgacaggtcatcttacattatttttggcatgttttttagtcattttcagtaggtttta 23266853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 24263758 - 24263790
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||||||||||||||||||||||||||||    
T  24263758 ggtcatcttacgttattcttagcatgtttttca 24263790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 24513204 - 24513236
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||||||||||||||||||||||||||||    
T  24513204 ggtcatcttacgttattcttagcatgtttttca 24513236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 31600075 - 31600135
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| |||| |||||||||||||||||||||||||| | || |||||  |||||||||    
T  31600075 tgatgacaggtcctcttacgttattcttagcatgtttttaagtctttttccgtaggtttta 31600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 23110194 - 23110265
Alignment:
Q  207 tatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||||||  |||||||||||||||||||| ||||||||| | ||||| ||  ||||||||| ||| ||||    
T  23110194 tatgatgacgtgtcatcttacgttattcttaacatgttttttagtcattatcggtaggttttaacagcaaaa 23110265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 25920918 - 25920844
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||||||||||||||||||| |||||   ||||||||| |||| |||| ||| |||| | | ||||||||||    
T  25920918 tcatcttacgttattcttagcatatttttttgtcattttcagtaggatttaccagcaaaacggatgagtattaga 25920844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 26348537 - 26348479
Alignment:
Q  211 atgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||| |||||| ||||||||||||||| |||||||||| |||||| || ||| |||||    
T  26348537 atgacaggtcattttacgttattcttagtatgtttttcagtcatttccagtagatttta 26348479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 24142505 - 24142464
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||||  ||||||||| ||||||||||||||||||||||    
T  24142505 atgatgacatgtcatcttatgttattcttagcatgtttttca 24142464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 24189000 - 24188935
Alignment:
Q  205 aatatgatgaccggtcatcttacgttattcttagcatgt-ttttcaatcattttcattaggtttta 269  Q
    ||||||||||| ||| | ||||| ||||||||||||||| |||||| ||||||| | |||||||||    
T  24189000 aatatgatgacaggtaaacttacattattcttagcatgttttttcactcatttttagtaggtttta 24188935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 26253580 - 26253539
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttca 259  Q
    ||||| ||| |||||||||| |||||||||||||||||||||    
T  26253580 gtcattttatgttattcttaacatgtttttcaatcattttca 26253539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 26069334 - 26069286
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||||| ||||||||| | ||||||||| ||| |||||    
T  26069334 atcttacgttattcttaacatgttttttagtcattttcagtagatttta 26069286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 9e-30; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 25886191 - 25886285
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||| ||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  25886191 tgatgacaggtcatcttacgttatttttatcatgtttttctgtcattttcattaggttttagcataaaaaaggaagagtattagaacgattgtct 25886285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 298
Target Start/End: Complemental strand, 26313276 - 26313186
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgat 298  Q
    ||||||||  |||||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||| |||||| | |||||||||||||||    
T  26313276 atgatgacaagtcatcttacattattcttagcatgttttttaatcaatttcagtaggttttagcagcaaaaagaatgagtattagaacgat 26313186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 21905823 - 21905738
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaa 294  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||||||||  || |||||||||| |||||| | |||||||||||    
T  21905823 tgatgacaggtcatcttatgttattcttagcatgtttttcagtcattttctgtatgttttagcaggaaaaaggaggagtattagaa 21905738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 18758386 - 18758307
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||||||| ||||||||||||| ||| ||||||| |||||||||| || |||||| | |||||||||||||||||    
T  18758386 atcttacgttatttttagcatgttttttaattattttcagtaggttttagtagcaaaaaggaggagtattagaacgattg 18758307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 23010052 - 23010127
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| |||| | | ||||||||||    
T  23010052 gtcatcttacgttattcttagcatgtttttcagtcattttcaataggttttaccagcaaaacgaaggagtattaga 23010127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 22569143 - 22569061
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    |||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||||||||||  |  |||||||||||||||    
T  22569143 ggtcatcttatgttattcttaccatgtttttcagtcaatttcagtaggttttagcagaaaaaatgagaagtattagaacgatt 22569061  T

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Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 28918275 - 28918194
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||| |||||||||||||||||||||||||| ||||||||| |||||||||||   |||||| | |||||||||||| ||||    
T  28918275 tcattttacgttattcttagcatgtttttcagtcattttcagtaggttttagctacaaaaaggaggagtattagaacaattg 28918194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 16157084 - 16157143
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttt 268  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  16157084 tgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggtttt 16157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 303
Target Start/End: Complemental strand, 17351075 - 17350981
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||  |||||||||||||||||||| ||| ||||||| | ||||||| ||||||||||||  |||||  | |||||||||||| |||||||    
T  17351075 tgatgacaagtcatcttacgttattcttaacatatttttcagttattttcagtaggttttagcaacaaaaatgaggagtattagaacaattgtct 17350981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 35680100 - 35680194
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||| || |||||||||||||||||||||||||||| | ||||||||| ||||||||| ||| ||||   | |||||||||| | |||||||    
T  35680100 tgatgacaggccatcttacgttattcttagcatgtttttaagtcattttcagtaggttttaccagcaaaacagaggagtattagagcaattgtct 35680194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 17891828 - 17891759
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||||  |||||||||||||||||||| ||||||||||| ||||||||| ||||||||| ||| ||||    
T  17891828 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttaccagcaaaa 17891759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 27540274 - 27540355
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    ||||| |||||||| ||||||||| ||||||| ||||||||| |||||||||||| ||||||  | || |||||||||||||    
T  27540274 gtcatattacgttactcttagcatatttttcagtcattttcagtaggttttagcataaaaaatgaggaatattagaacgatt 27540355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 24086314 - 24086397
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||| ||||||||||||||||||||||||||| |   ||| | |||| |||||||| |||||| | |||||||||||||||||    
T  24086314 ggtcaacttacgttattcttagcatgtttttcagtttattttagtaggatttagcagcaaaaaggaggagtattagaacgattg 24086397  T

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Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 29144732 - 29144669
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagca 272  Q
    ||||||| ||||||||||||||||||||||||||||||| | |||||  || ||||||||||||    
T  29144732 tgatgacaggtcatcttacgttattcttagcatgttttttagtcattaccaataggttttagca 29144669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 34574603 - 34574522
Alignment:
Q  217 ggtcatcttacgttattcttagcatgt-ttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacga 297  Q
    ||||||||||||||||||||||||||| |||| | | ||||||| |||||||||  |||||| || | ||||||||||||||    
T  34574603 ggtcatcttacgttattcttagcatgtttttttagttattttcagtaggttttaatagaaaataggaggagtattagaacga 34574522  T

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Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 25537653 - 25537613
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  25537653 tgatgacaggtcatcttacgttattcttagcatgtttttca 25537613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 27907530 - 27907585
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagca 272  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||| || |||||||||    
T  27907530 ggtcaccttacattattcttagcatgtttttcagtcattttcagtaagttttagca 27907585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 29717369 - 29717418
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatca-ttttcattaggtttta 269  Q
    |||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  29717369 atcttaggttattcttagcatgtttttcaatcatttttcagtaggtttta 29717418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 28766947 - 28766907
Alignment:
Q  211 atgaccggtcatcttacgttattcttagcatgtttttcaat 251  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  28766947 atgacaggtcatcttacgttattcttaacatgtttttcaat 28766907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 32130699 - 32130747
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||| |||||||||||||||||||||| |||||| ||| |||||||    
T  32130699 tgatgacaggtcatcttacgttattcttagtatgtttatcagtcatttt 32130747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 32137912 - 32137972
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| |||||||||||||||||||||  |||||| ||| ||||||| | |||||||||    
T  32137912 tgatgacaggtcatcttacgttattcttattatgtttatcagtcatttttagtaggtttta 32137972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 32139334 - 32139382
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||| |||||||||||||||||||||| |||||| ||| |||||||    
T  32139334 tgatgacaggtcatcttacgttattcttagtatgtttatcagtcatttt 32139382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 249
Target Start/End: Original strand, 18120554 - 18120585
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||||||||||||||||||||||||||||    
T  18120554 gtcatcttacgttattcttagcatgtttttca 18120585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 25922702 - 25922660
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaat 251  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||    
T  25922702 tgatgacaggttatcttacgttatttttagcatgtttttcaat 25922660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 29892278 - 29892228
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttt 268  Q
    |||||||||||||||||||| ||| ||||||| | ||||||| ||||||||    
T  29892278 gtcatcttacgttattcttaacatatttttcagttattttcaataggtttt 29892228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 25882581 - 25882629
Alignment:
Q  220 catcttacgttattcttagcatgtttttcaatcattttcattaggtttt 268  Q
    |||||||||||||| ||||||||||||||| ||| ||| | ||||||||    
T  25882581 catcttacgttatttttagcatgtttttcagtcaattttagtaggtttt 25882629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 34369420 - 34369380
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| | |||||||| ||||||||||||||||||||||    
T  34369420 tgatgacagatcatcttatgttattcttagcatgtttttca 34369380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 5e-28; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 28621701 - 28621610
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||||| |||||||||||||||||||||||| | |||||||||||||||||||| ||||||| | |||||||||||||||||    
T  28621701 tgatgacaggtcatctaacgttattcttagcatgtttttcagttattttcattaggttttagcataaaaaagaatgagtattagaacgattg 28621610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 20400431 - 20400341
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||| |||||| | ||||||||||||||||    
T  20400431 tgatgacaggtcatcttacgttattcttagcatgcttttcagtcattttcagtgggttttagcagcaaaaaggaggagtattagaacgatt 20400341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 13313270 - 13313362
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||  ||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||| ||||    
T  13313270 atgatgacatgtcgtcttacgttattcttagcatgtttttcagtcattttcaataggttttagcagcaaaaaggaggagtattagaacaattg 13313362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 24090892 - 24090969
Alignment:
Q  223 cttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||||| |||||| |||||||||||||| ||||    
T  24090892 cttacgttattcttagcatgtttttcagttattttaattaggttttagcagcaaaaaggaagagtattagaacaattg 24090969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 29765391 - 29765483
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatg-tttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||||||||||||||||||||||| ||||| | | ||||||| ||||||||||||| |||||| ||| |||||||||||||||    
T  29765391 tgatgacaggtcatcttacgttattcttagcatgtttttttagttattttcagtaggttttagcagcaaaaaggaagtgtattagaacgattg 29765483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 15176440 - 15176523
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||||| ||||||||||||||| ||||| ||| ||||| ||||||||||||| |||||| | |||||||||||||||||    
T  15176440 ggtcatcttacattattcttagcatgtgtttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattagaacgattg 15176523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 17510993 - 17510910
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| | |||||| | |||||||||||||||||    
T  17510993 ggtcatcttacattattcttagcatgtttttcagtcactttcagtaggttttagctgcaaaaaggaggagtattagaacgattg 17510910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 19705083 - 19704992
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||  ||||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||| | |||| | |||||||||||||||||    
T  19705083 tgatgacatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaggttttaacagcataaagaaggagtattagaacgattg 19704992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 24583168 - 24583262
Alignment:
Q  206 atatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||| ||||| |||||| ||| |||||||||||||||||||||| ||||||| | ||| ||||||||| |||||| | |||||||||||||||||    
T  24583168 atataatgacaggtcattttatgttattcttagcatgtttttcagtcatttttagtagattttagcagcaaaaaggaggagtattagaacgattg 24583262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 29380960 - 29381052
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatg-tttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||||||||||||||||||||||| ||||| | ||| ||||| |||||||||| || |||||| | |||||||||||||||||    
T  29380960 tgatgacaggtcatcttacgttattcttagcatgtttttttattcaatttcaataggttttagtagcaaaaaggaggagtattagaacgattg 29381052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 17100206 - 17100277
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaag 280  Q
    ||||||| |||||||| | |||||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  17100206 tgatgacaggtcatctcaagttattcttagcatgtttttcaattattttcataaggttttagcagcaaaaag 17100277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 14271938 - 14271878
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| |||||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  14271938 tgatgacaggtcatcttacgttattcttagcatgtttttcaacctttttcagtaggtttta 14271878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 23867829 - 23867920
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||| |||||||| ||||||||||  |||||| | ||||||||||||| ||| |  | |||||||||||||||||    
T  23867829 tgatgacaggtcatcttacgtaattcttagtatgtttttcaggcatttttagtaggttttagcagcaaagacgaggagtattagaacgattg 23867920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 24389854 - 24389762
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||| |||||||||||||||||||||| | |||||| | | ||||||| ||||||||||||  |||||  | |||||||||||| ||||    
T  24389854 atgatgacaggtcatcttacgttattcttagtaagttttttagttattttcagtaggttttagcaacaaaaatgaggagtattagaacaattg 24389762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 30117655 - 30117727
Alignment:
Q  206 atatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||| |||| ||| ||||||||||||| ||||||||||||||| ||||||||| ||||||||| ||| ||||    
T  30117655 atatggtgacaggttatcttacgttatttttagcatgtttttcattcattttcagtaggttttaccagcaaaa 30117727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 21695413 - 21695472
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttt 268  Q
    |||||||  |||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  21695413 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggtttt 21695472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 24380362 - 24380413
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  24380362 gtcatcttacgttattcttagcatgtttttcactcaatttcagtaggtttta 24380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 18446867 - 18446945
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaac 295  Q
    ||||||||||||||||| ||| ||||||||||| | |||| || |||| |||||||| |||||| | ||||||||||||    
T  18446867 ggtcatcttacgttatttttaccatgtttttcagttatttccagtaggatttagcagcaaaaaggaggagtattagaac 18446945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 21316880 - 21316838
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaat 251  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  21316880 tgatgacaggtcatcttacgttattcttagcatgtttttcaat 21316838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 303
Target Start/End: Complemental strand, 26888583 - 26888489
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||| | |||| |||||||||| ||||||| ||||||| | ||||| | ||||||||||||  |||||| | ||||||| ||||||||||||    
T  26888583 tgatgacagatcattttacgttatttttagcatatttttcatttatttttagtaggttttagcaacaaaaaggaggagtattggaacgattgtct 26888489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 19265920 - 19265879
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19265920 atgatgacaggtcatcttacgttattcttagcatgtttttca 19265879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 6286379 - 6286319
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| ||||||||||||||||||||||||||| |||| |||| ||| | |||||||||    
T  6286379 tgatgacaggtcatcttacgttattcttagcatgtctttctatcaattttagtaggtttta 6286319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 18836889 - 18836841
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  18836889 tgatgacagatcatcttacattattcttagcatgtttttcaatcatttt 18836841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 22501933 - 22501861
Alignment:
Q  206 atatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||||||||   ||||||||||||||||||| |||||||||||||| |||||| | ||||||| ||| ||||    
T  22501933 atatgatgacatatcatcttacgttattcttatcatgtttttcaatctttttcagttggttttaccagcaaaa 22501861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 24909001 - 24908941
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| |||||  |||||||||| ||||||||||||||||||| ||||| |||||||||    
T  24909001 tgatgacaggtcaaattacgttatttttagcatgtttttcaatcaatttcaataggtttta 24908941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 24911222 - 24911162
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| |||||  |||||||||| ||||||||||||||||||| ||||| |||||||||    
T  24911222 tgatgacaggtcaaattacgttatttttagcatgtttttcaatcaatttcaataggtttta 24911162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 25481504 - 25481596
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||| |||||||||||||||||||||||||| ||| |||| | ||| | ||||   |||||| |||| | | |||||||||||||||||    
T  25481504 atgatgacaggtcatcttacgttattcttagcatgctttacaattaattttagtaggaaatagcagcaaaatggaggagtattagaacgattg 25481596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 26139877 - 26139794
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||||||||||||||||||||||||||||||   ||| | ||||   |||||  |||||| | |||||||||||||||||    
T  26139877 ggtcatcttacgttattcttagcatgtttttcaatttattttagtaggaaatagcatcaaaaaggaggagtattagaacgattg 26139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 24520019 - 24520093
Alignment:
Q  226 acgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||||||||||||||||||| | ||||||| |||| ||||| || |||||| |  ||||||||||| ||||    
T  24520019 acgttattcttagcatgtttttcagttattttcagtaggatttagtagcaaaaaggataagtattagaacaattg 24520093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 34499311 - 34499241
Alignment:
Q  223 cttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||||||| ||||||||| ||||| ||||||| ||||| ||||| ||| |||||| | ||||||||||    
T  34499311 cttacgttatttttagcatgtctttcagtcatttttattagattttaccagcaaaaaggatgagtattaga 34499241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 6886768 - 6886727
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  6886768 atgatgacaagtcatcttacgttattcttagcatgtttttca 6886727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 18829424 - 18829379
Alignment:
Q  206 atatgatgaccggtcatcttacgttattcttagcatgtttttcaat 251  Q
    |||||||||| | |||||||| ||||||||||||||||||||||||    
T  18829424 atatgatgacagttcatcttatgttattcttagcatgtttttcaat 18829379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 24381994 - 24382047
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttag 270  Q
    ||||||||| ||||||||||||||||| ||| | ||||||||| ||||||||||    
T  24381994 ggtcatctttcgttattcttagcatgtattttagtcattttcagtaggttttag 24382047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 17976320 - 17976276
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcatt 261  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||    
T  17976320 ggtcatcttacgttatttttagcatgttttttagtcattttcatt 17976276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 28903979 - 28904027
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||||||||||| |||||  ||||||||||||| |||||||||    
T  28903979 atcttacgttattcttagtatgttcatcaatcattttcagtaggtttta 28904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 5152016 - 5151957
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttt 268  Q
    |||||||  |||||||||||||||||||| ||||||||||| | ||||||| | ||||||    
T  5152016 tgatgacaagtcatcttacgttattcttaacatgtttttcagtaattttcagttggtttt 5151957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 25227356 - 25227301
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattagg 264  Q
    ||||||| ||||||||||| |||||||||||| |||||||| | ||||||| ||||    
T  25227356 tgatgacaggtcatcttacattattcttagcaggtttttcagttattttcagtagg 25227301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 249
Target Start/End: Original strand, 26829475 - 26829506
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||||||||||||||||||||||||||||    
T  26829475 gtcatcttacgttattcttagcatgtttttca 26829506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 4007151 - 4007209
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttt 267  Q
    ||||||| |||||||||| |||| | ||||||||||||||| ||||||| | |||||||    
T  4007151 tgatgacaggtcatcttatgttaatattagcatgtttttcagtcatttttagtaggttt 4007209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 13833615 - 13833653
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttca 259  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  13833615 atcttacgttattctttgcatgtttttcagtcattttca 13833653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 17650058 - 17650008
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttca 259  Q
    |||||||  |||||||||||||||||||| ||||||||||| || ||||||    
T  17650058 tgatgacaagtcatcttacgttattcttaacatgtttttcagtcgttttca 17650008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 24105515 - 24105577
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttag 270  Q
    |||| ||| |||||||||||||||| |||||||||||||||| | ||| ||| |||| |||||    
T  24105515 atgaggacaggtcatcttacgttatgcttagcatgtttttcagttattctcagtaggatttag 24105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 24381325 - 24381363
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgttttt 247  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  24381325 tgatgacaggtcatcttaagttattcttagcatgttttt 24381363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Original strand, 28275334 - 28275364
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttca 249  Q
    |||||||||||||||||||||||||||||||    
T  28275334 tcatcttacgttattcttagcatgtttttca 28275364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 15058519 - 15058564
Alignment:
Q  224 ttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||||||||||||||||| | ||||||| | |||||||||    
T  15058519 ttacgttattcttagcatgttttttagtcatttttagtaggtttta 15058564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 17835632 - 17835580
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||||||||||||||| || ||||||| | | ||||| |||||||||    
T  17835632 ggtcatcttacgttattcttagtatatttttcagttaatttcagtaggtttta 17835580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 18007620 - 18007573
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||| ||||||| ||||||| ||||||||| |||||||||    
T  18007620 atcttacgttattgttagcat-tttttcagtcattttcagtaggtttta 18007573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 18570589 - 18570549
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| | ||||||||||||||||||||||| |||||||    
T  18570589 tgatgacagatcatcttacgttattcttagcatatttttca 18570549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 28858932 - 28858873
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| || |||||||| |||||||||||||| |||||| ||||||| | |||||||||    
T  28858932 tgatgacaggccatcttacattattcttagcatg-ttttcagtcatttttagtaggtttta 28858873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 208 - 303
Target Start/End: Complemental strand, 729234 - 729139
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||  |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| |||||| | ||||||||||||||||||||    
T  729234 atgatgaaaggtcatcttacgttattcttagcatgcttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgtct 729139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 15542307 - 15542399
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||  |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||||||||    
T  15542307 atgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttagcagcaaaaagtaggagtattagaacgattg 15542399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 21663090 - 21663181
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||  |||||| |  ||||||||||||||||    
T  21663090 tgatgacaggtcatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacatcaaaaaggagaagtattagaacgattg 21663181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 303
Target Start/End: Complemental strand, 12210354 - 12210268
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||| |||||| | ||||||||||| ||||||||    
T  12210354 ggtcatcttacattattcttagcatgtttttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattagaaagattgtct 12210268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 18527493 - 18527587
Alignment:
Q  206 atatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||||  |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| | |||||| | ||||||||||| |||||    
T  18527493 atatgatgacaagtcatcttacgttattcttagcatctttttcactcattttcaataggttttagcggcaaaaaggaggagtattagaatgattg 18527587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 14782627 - 14782539
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacga 297  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||| | || |||||| ||||    
T  14782627 tgatgacaggtcatcttacgttattcttagcatgtttttcactcaatttcaataggttttagcagcaaaaaggaggactattaggacga 14782539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 27973400 - 27973319
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtatt 290  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||| |||||| | |||||||    
T  27973400 tgatgaccagttatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacagcaaaaaggaggagtatt 27973319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 18827493 - 18827402
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||||||||||| ||||||||||| | ||||| ||||||| ||||||| | |||| | ||||||||||| |||||    
T  18827493 tgatgactggtcatcttacgttattcttaacatgtttttcagttattttaattaggtcttagcaggagaaaggatgagtattagaatgattg 18827402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 18832312 - 18832222
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    ||||||| |||||||||| ||| |||||||||||||||||| | | ||| ||||||| ||||||| |||||| | ||||||||||||||||    
T  18832312 tgatgacaggtcatcttaggttcttcttagcatgtttttcagttactttaattaggtcttagcagcaaaaaggaggagtattagaacgatt 18832222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 22507393 - 22507473
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaa-tcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||||||||||||||||||||||  | | ||||||||||||||||||| | |||||| | |||||||||||||||||    
T  22507393 atcttacgttattcttagcatgtttttttagttattttcattaggttttagcggcaaaaaggaggagtattagaacgattg 22507473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 21450864 - 21450773
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||||||| |||||  ||||||||||| ||| ||||||||| ||||||||||||| |||||| | ||||||| ||| |||||    
T  21450864 tgatgacaggtcatcttaagttatctttagcatgtttctcagtcattttcagtaggttttagcagcaaaaaggaggagtattggaaagattg 21450773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 26611331 - 26611422
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | | | | |||| |||||||| |||||| | ||||||| ||| |||||    
T  26611331 tgatgacaggtcatcttacgttattcttagcatgtttttcaattaatattagtaggatttagcagcaaaaaggaggagtattggaatgattg 26611422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 15158788 - 15158873
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaa 294  Q
    ||||||| |||||  |||||||||||||||||||||||||| | ||||| | |||| |||||||| |||||| | |||||||||||    
T  15158788 tgatgacaggtcaaattacgttattcttagcatgtttttcagttattttaagtaggatttagcagcaaaaaggaggagtattagaa 15158873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 25402435 - 25402527
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgt 301  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |   ||| | |||| |||||||| |||||  | ||||||||||||||||||    
T  25402435 tgatgacaggtcatcttgcgttattcttagcatgtttttcagtttattttagtaggatttagcagcaaaaaagaggagtattagaacgattgt 25402527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 26647357 - 26647417
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| ||||||||||||||||||||||||| ||||||| || |||||| |||||||||    
T  26647357 tgatgacaggtcatcttacgttattcttagcatatttttcagtctttttcagtaggtttta 26647417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 27116232 - 27116307
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||||||||| |||||| ||||||||||||||||||| | ||||||||| || ||||| | | ||||||||||    
T  27116232 gtcatcttacgtttttcttaacatgtttttcaatcatttttagtaggttttaccataaaaacggatgagtattaga 27116307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 28009834 - 28009759
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    |||||||||| ||||||||||||||||||||| ||||||||  || |||||||||| |||||| | ||| ||||||    
T  28009834 gtcatcttacattattcttagcatgtttttcagtcattttcgctaagttttagcagcaaaaaggaggagcattaga 28009759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 16114885 - 16114847
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttca 259  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16114885 atcttacgttattcttagcatgtttttcaatcattttca 16114847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 24901297 - 24901237
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||| ||||| ||| ||||    
T  24901297 gtcatcttacgttatttttagcatatttttcaatcattttcagtagattttaccagcaaaa 24901237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 33192449 - 33192389
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||  ||||||||||| |||||||||||||||||||| ||| ||||| |||||||||    
T  33192449 tgatgacaagtcatcttacgctattcttagcatgtttttcagtcaatttcagtaggtttta 33192389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 18734585 - 18734676
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |    || | |||| |||| ||| |||||| | |||||||||||||||||    
T  18734585 tgatgacaggttatcttacgttattcttagcatgtttttcagtttactttagtaggatttaacagcaaaaaggaggagtattagaacgattg 18734676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 22426515 - 22426606
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |   ||| | ||||   |||||| |||||| | |||||||||||||||||    
T  22426515 tgatgacaggtcatcttacgtcattcttagcatgtttttcagtttattttagtaggaaatagcagcaaaaaggaggagtattagaacgattg 22426606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 24464711 - 24464664
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattt 256  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||    
T  24464711 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattt 24464664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 14235293 - 14235343
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttt 268  Q
    |||||||||||||| ||||||||||||||||| ||||||| | ||||||||    
T  14235293 gtcatcttacgttactcttagcatgtttttcagtcatttttagtaggtttt 14235343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 22621890 - 22621832
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttt 267  Q
    ||||||| ||| ||||||||| ||||||||||||||||||| ||||||| | |||||||    
T  22621890 tgatgacaggttatcttacgtaattcttagcatgtttttcagtcatttttagtaggttt 22621832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 7221604 - 7221563
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttca 259  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  7221604 gtcatcttacgttattcttaacatgtttttcagtcattttca 7221563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 9782978 - 9783039
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||  ||| | |||||||||    
T  9782978 atgatgacagatcatcttacgttattattagcatgtttttcaatctattttagtaggtttta 9783039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 11845221 - 11845281
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| | ||||||||||||||||||||||| ||||||| | ||||| | |||||||||    
T  11845221 tgatgacagatcatcttacgttattcttagcatatttttcagttatttttagtaggtttta 11845281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 22626152 - 22626192
Alignment:
Q  207 tatgatgaccggtcatcttacgttattcttagcatgttttt 247  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  22626152 tatgacgacaggtcatcttacgttattcttagcatgttttt 22626192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 27912161 - 27912113
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    |||||||  |||||||||||||||||||| ||||||||||| |||||||    
T  27912161 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcatttt 27912113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 295
Target Start/End: Complemental strand, 16180799 - 16180728
Alignment:
Q  224 ttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaac 295  Q
    |||| ||||||||||||||||||||| | ||||||| |||  |||||||  |||||| | ||||||||||||    
T  16180799 ttacattattcttagcatgtttttcagttattttcagtagagtttagcaacaaaaaggaggagtattagaac 16180728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 21333071 - 21333162
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||  ||||||||| ||||||||||  ||||||| || | | ||||| ||||||||||||| |||||| |  ||||||| ||||||||    
T  21333071 tgatgacatgtcatcttatgttattcttaatatgttttgcacttagtttcaataggttttagcaggaaaaaggagaagtattaaaacgattg 21333162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 15571698 - 15571748
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||| ||||||||||||||| ||| ||| | |||||||||    
T  15571698 tcatcttacgttatttttagcatgtttttcagtcaattttagtaggtttta 15571748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 16363710 - 16363660
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||| |||||||||||| || ||||||||| ||| |||||    
T  16363710 tcatcttacgttatttttagcatgttttccagtcattttcagtagttttta 16363660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 249
Target Start/End: Complemental strand, 26022480 - 26022442
Alignment:
Q  211 atgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  26022480 atgacaggtgatcttacgttattcttagcatgtttttca 26022442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 35133982 - 35133921
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||| ||||||||||||||||   |||||||||||||| || |||| | |||||||||    
T  35133982 atgatgacaggtcatcttacgttatctgtagcatgtttttcagtcttttttagtaggtttta 35133921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 44797215 - 44797166
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttc 258  Q
    ||||||| | ||||||||| ||||||||||||||||||||| || |||||    
T  44797215 tgatgacagatcatcttacattattcttagcatgtttttcagtctttttc 44797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 9403721 - 9403681
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| | ||||||||| |||||||||||||||||||||    
T  9403721 tgatgacagatcatcttacattattcttagcatgtttttca 9403681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 15526806 - 15526846
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||  |||||||||||||||||||| |||||||||||    
T  15526806 tgatgacatgtcatcttacgttattcttatcatgtttttca 15526846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 15630933 - 15630981
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||| ||| |||||| |||||||||||||||||||| | |||||||    
T  15630933 tgatgacaggttatcttatgttattcttagcatgttttttagtcatttt 15630981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 16785612 - 16785692
Alignment:
Q  220 catcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||| |||| |||||||||| || ||| ||||||| | ||||||| ||| |||| | | |||||||||||| ||||    
T  16785612 catcttacgctatttttagcatgttcttaaataattttcaatgggttttaccagtaaaacggaggagtattagaacaattg 16785692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 16817108 - 16817148
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||  |||||||||||||||||||| |||||||||||    
T  16817108 tgatgacaagtcatcttacgttattcttaacatgtttttca 16817148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 21536914 - 21536954
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||||||||||||| ||||||| ||||||| |||||||    
T  21536914 ggtcatcttacgttatttttagcatatttttcagtcatttt 21536954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 26581660 - 26581620
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttca 259  Q
    ||||||||| ||||||||||||||||||||| | |||||||    
T  26581660 tcatcttacattattcttagcatgtttttcagttattttca 26581620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 26249075 - 26249167
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgt 301  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||| |||||    
T  26249075 tgatgacaggtcatcttacgttattcatagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggatgagtattagaacaattgt 26249167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 8977479 - 8977556
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaac 295  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| | ||||||||||||    
T  8977479 gtcatcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaac 8977556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 13280857 - 13280765
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||  |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |||||| | ||||||||||| |||||    
T  13280857 atgatgacatgtcatcttacgttattcttagcatgtttttcaattaatttcagtaggttttagcagcaaaaagaacgagtattagaatgattg 13280765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 4450769 - 4450677
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||| | |||||||||||||||||||||||||||| || ||||||||| ||||||||||||  |||| | | |||||||||||||||||    
T  4450769 atgatgacagatcatcttacgttattcttagcatgttttccagtcattttcagtaggttttagcaacaaaatggaggagtattagaacgattg 4450677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 208 - 303
Target Start/End: Complemental strand, 2566004 - 2565909
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||||  ||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||  |||||| | |||||||| |||||||||||    
T  2566004 atgatgacaagtcatcttacgatattcttagcatgtttttcagtcattttcagtaggttttggcaagaaaaaggaggagtattataacgattgtct 2565909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 3585522 - 3585613
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||  |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||| | | |||||||| || |||||    
T  3585522 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtattaaaatgattg 3585613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 11804795 - 11804704
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| | |||||||||||||||| || ||||||||||| ||||||||| ||||||||||||| |||||| |  ||||||||||||||||    
T  11804795 tgatgacagatcatcttacgttattcataacatgtttttcagtcattttcagtaggttttagcagcaaaaaggagcagtattagaacgattg 11804704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 18986754 - 18986832
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacga 297  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |||||| | ||||||||||||||    
T  18986754 tcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacga 18986832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 297
Target Start/End: Original strand, 19001382 - 19001460
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacga 297  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||| |||||| | ||||||||||||||    
T  19001382 tcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacga 19001460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 23173685 - 23173779
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||  |||||||||||||||||||||||||||||||| | ||||| | ||||||||||| | |||||| | |||||||||||| |||||||    
T  23173685 tgatgacatgtcatcttacgttattcttagcatgtttttcagttatttttaataggttttagctgcaaaaaggaggagtattagaacaattgtct 23173779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 5236875 - 5236952
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaac 295  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| |||||| | ||| ||||||||    
T  5236875 gtcatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggaggattagaac 5236952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 3173807 - 3173716
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||  | | ||||||||||| |||||    
T  3173807 tgatgacagatcatcttgcgttattcttagcatgtttttcagtcattttcattaggtttcagcagtaaatgggaggagtattagaaagattg 3173716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 9078881 - 9078976
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatg-tttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||  ||||||||||||||||||||||||| ||||||| | ||||||| ||||||| ||||| |||||| | ||||||| ||||||||||||    
T  9078881 tgatgacatgtcatcttacgttattcttagcatgttttttcagttattttcagtaggtttcagcagcaaaaaggaggagtattggaacgattgtct 9078976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 39270273 - 39270363
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||  ||||||||||||||| |||||||||||||||| ||||||| | || |||||||||| |||||| | |||||||||||||||||    
T  39270273 tgatgacatgtcatcttacgttat-cttagcatgtttttcagtcatttttagtaagttttagcagtaaaaaggaggagtattagaacgattg 39270363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 9767883 - 9767813
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||||| |||||||| ||||||||||||||||||||||||  |||||||| ||||||||| ||||||||    
T  9767883 atgatgacaggtcatctcacgttattcttagcatgtttttcagccattttcagtaggttttaccagaaaaa 9767813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 8052439 - 8052519
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||  | ||||||||||| |||||    
T  8052439 tcatcttacgttattcttagcatgtttt-cagtcattttcagtaggttttagcagcaaaaatgaggagtattagaatgattg 8052519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 10611800 - 10611719
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||||||||| ||| | ||||| | ||||||||||||| |||||| | |||||||||||||||||    
T  10611800 tcatcttgcgttattcttagcatgtttctcagtgattttaaataggttttagcagcaaaaaggatgagtattagaacgattg 10611719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 19201322 - 19201392
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaa 279  Q
    ||||||| | ||||||||||||||||||||||||||||||| | ||||| |||||| |||||||| |||||    
T  19201322 tgatgacagatcatcttacgttattcttagcatgtttttcagtaatttttattaggctttagcagcaaaaa 19201392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 8314908 - 8314767
Alignment:
Q  65 cttccggttcatgtagtgttccatcagccacccccacaagctttttagctggagtcgtccttaatcctccgatcttttttaacgtttctattgacatcag 164  Q
    |||| |||||||||||||| |||||||| || |||||||| |||| ||||||  |  || | | ||||  ||| ||||| || ||||| ||||||||||     
T  8314908 cttctggttcatgtagtgtcccatcagctactcccacaagtttttcagctggtatgatcatcagtcctttgatatttttgaatgtttccattgacatcaa 8314809  T
Q  165 gatgatgttggaccctaaattacataaagcgtccccaagaaa 206  Q
    | ||||||||  |||||||| |||||||| ||||||||||||    
T  8314808 gttgatgttgacccctaaatcacataaagtgtccccaagaaa 8314767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 10332501 - 10332441
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||| || ||||||    
T  10332501 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgtttta 10332441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 19201555 - 19201464
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||||||| |||||||||| ||||||||||  | ||||||| |||| |||||||| ||||||   || ||||||||||||||    
T  19201555 tgatgacaggtcatcttatgttattcttaacatgtttttctgttattttcagtaggatttagcagcaaaaaggtggactattagaacgattg 19201464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 21707346 - 21707397
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  21707346 gtcatcttacgttattcttagcatatttttcaatcatttttagtaggtttta 21707397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 9722528 - 9722478
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| |||||    
T  9722528 tcatcttacgttattattagcatgtttttcaatcattttcagtagatttta 9722478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 2927971 - 2927931
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  2927971 tgatgacaggtcatcttacgttattcttagcatgtttttca 2927931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 19154915 - 19154875
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  19154915 tgatgacaggtcatcttacgttattcttagcatgtttttca 19154875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 20754314 - 20754274
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  20754314 tgatgacaggtcatcttacgttattcttagcatgtttttca 20754274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 3692762 - 3692829
Alignment:
Q  211 atgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||| |||||||||||||||||| |||||| ||||||| ||||||||  ||||||||| ||| ||||    
T  3692762 atgacaggtcatcttacgttattcatagcatatttttcattcattttctgtaggttttaccagcaaaa 3692829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 4900336 - 4900379
Alignment:
Q  206 atatgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  4900336 atatgatgatcggtcatcttacgttattcttagcatatttttca 4900379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 14195842 - 14195776
Alignment:
Q  212 tgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||| ||| |||||| |||||||||||||||||||||| ||||||| | ||||||||| ||| ||||    
T  14195842 tgacaggtgatcttatgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaa 14195776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 1254694 - 1254754
Alignment:
Q  207 tatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttt 268  Q
    |||||||||  |||||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  1254694 tatgatgacaagtcatcttacgttatt-ttagcatgtttttcagtcattttcagttggtttt 1254754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 1767473 - 1767433
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  1767473 tgatgacaggtcatcttacgttattcttagcatatttttca 1767433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 1811001 - 1810953
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    |||||||  ||||||||||||||||| |||||||||||||| |||||||    
T  1811001 tgatgacatgtcatcttacgttattcgtagcatgtttttcagtcatttt 1810953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 2506820 - 2506860
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  2506820 tgatgacaggtcatcttacgttattctcagcatgtttttca 2506860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 3736425 - 3736373
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||||||||||||||||||| | ||  ||||| |||||||||    
T  3736425 ggtcatcttacgttattcttagcatgttttttagtctatttcagtaggtttta 3736373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 13252715 - 13252747
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||||||||||||||||||||||||||||    
T  13252715 ggtcatcttacgttattcttagcatgtttttca 13252747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 17887730 - 17887778
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||| ||||||| ||||||||||||||||| ||||||| |||||||    
T  17887730 tgatgacaggtcatcctacgttattcttagcatatttttcagtcatttt 17887778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 4994825 - 4994786
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgttttt 247  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  4994825 atgatgacaggtcatcttacgttatttttagcatgttttt 4994786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 6039306 - 6039357
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||| ||||||||| ||||||||||| ||||||||| ||| |||||    
T  6039306 gtcatcttacattattcttaacatgtttttcagtcattttcagtagatttta 6039357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 10414279 - 10414318
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttc 248  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  10414279 tgatgacaggtcatcttacattattcttagcatgtttttc 10414318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 2505930 - 2505892
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  2505930 tcatcttacgttattcttagcatatttttcagtcatttt 2505892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 9288997 - 9288947
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||| |||||||| |||||||||||| ||| ||||| |||||||||    
T  9288997 tcatcttacattattcttggcatgtttttcagtcaatttcagtaggtttta 9288947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 9298789 - 9298739
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||| |||||||| |||||||||||| ||| ||||| |||||||||    
T  9298789 tcatcttacattattcttggcatgtttttcagtcaatttcagtaggtttta 9298739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 44192371 - 44192409
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  44192371 tcatcttacgttattttcagcatgtttttcaatcatttt 44192409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 1589337 - 1589276
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatca-ttttcattaggtttta 269  Q
    ||||||| |||||||||| | ||||||||||||||||||||  || |||||| |||||||||    
T  1589337 tgatgacaggtcatcttatgctattcttagcatgtttttcagccatttttcagtaggtttta 1589276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 10584116 - 10584148
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaa 250  Q
    |||||||||||||||| ||||||||||||||||    
T  10584116 gtcatcttacgttattattagcatgtttttcaa 10584148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 13287710 - 13287750
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||  |||||||||||||||||||| |||||||||||    
T  13287710 tgatgacaagtcatcttacgttattcttaacatgtttttca 13287750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 16055264 - 16055296
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||||||| |||||||||||||||||||||    
T  16055264 ggtcatcttacattattcttagcatgtttttca 16055296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 207 - 303
Target Start/End: Complemental strand, 24480123 - 24480027
Alignment:
Q  207 tatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||| |||||| | ||||||| ||||||||||||    
T  24480123 tatgatgataggtcatcttacgttattcttagcatgtatttcaatcattttcagtaggttttggcagcaaaaaggaggagtattggaacgattgtct 24480027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 14641729 - 14641643
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaac 295  Q
    ||||||| ||| ||||||||||||||||||||||||||||| | ||||||| ||||||||||||| |||||| | ||||||||||||    
T  14641729 tgatgacaggttatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggagtattagaac 14641643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 24469894 - 24469804
Alignment:
Q  210 gatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||||  ||| |||||| | |||||||||||||||||    
T  24469894 gatgacaggtcatcttacgttatttttagtatgtttttcaatcattttcagtaggttttgacagcaaaaaggaggagtattagaacgattg 24469804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 17384120 - 17384029
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| | ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| |||||| | |||||||| || |||||    
T  17384120 tgatgacagatcatcttacattattcttagcatgtttttcagttattttcattaggttttagcagcaaaaaggaggagtattacaatgattg 17384029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 17822032 - 17822115
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttc-aatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||||||||||||||||||||||||| | | ||||||| |||| |||||||| |||||| | |||||||||||||||||    
T  17822032 gtcatcttacgttattcttagcatgtttttctagttattttcaataggatttagcagcaaaaaggaggagtattagaacgattg 17822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 22404254 - 22404348
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||  |||||||| ||||||||||| ||||||||||| | | ||||| ||||||||||||| |||||| | |||||||| |||||||||||    
T  22404254 tgatgacatgtcatctttcgttattcttatcatgtttttcagtaaatttcagtaggttttagcagcaaaaaggaggagtattaaaacgattgtct 22404348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 303
Target Start/End: Complemental strand, 14723771 - 14723687
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||||||||||||||||||| |||||| | ||||||| |||| ||||| || |||||| | ||||||||||| ||||||||    
T  14723771 tcatcttacgttattcttagcatgcttttcagttattttcaataggatttaggagcaaaaaggaggagtattagaatgattgtct 14723687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 1636730 - 1636640
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| | ||||||||||||||||||||||||||||||| | ||||| | ||||||||||| | ||||||  ||||||||||||| ||||    
T  1636730 tgatgacagatcatcttacgttattcttagcatgtttttcagttatttttagtaggttttagcggcaaaaag-gagagtattagaacaattg 1636640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 26820955 - 26820896
Alignment:
Q  211 atgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttag 270  Q
    ||||| ||||||||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  26820955 atgacaggtcatcttacgttactcttagcatgtttttcagttattttcattaggttttag 26820896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 303
Target Start/End: Complemental strand, 17847877 - 17847783
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||| | || ||||| |||||||||||||||||||| | | ||||| | || |||||||||| |||||  ||||||||||||||||||||||    
T  17847877 tgatgacagatcctcttatgttattcttagcatgttttttagttattttaagtaagttttagcagcaaaaatgaagagtattagaacgattgtct 17847783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 27961302 - 27961252
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttt 268  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  27961302 gtcatcttacgttattcttaacatgtttttcaatcattttcagtaggtttt 27961252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 22564557 - 22564618
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||| ||||    
T  22564557 ggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaa 22564618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 8038050 - 8038134
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| |||||| || ||| || ||| || ||| | ||||||||||    
T  8038050 tgatgacaggtcatcttacgttattcttagcctgtttttcaatctttttcactaagttataccagcaataaggaggagtattaga 8038134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 14076493 - 14076409
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||| |||||||||||||||||||||||||| |||||| | ||||||| || | |||||||| ||| || | ||||||||||    
T  14076493 tgatgacaggtcatcttacgttattcttagcatggttttcagttattttcagtatgatttagcagcaaagaggaggagtattaga 14076409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 21152510 - 21152585
Alignment:
Q  228 gttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||| ||||||||||||||||| ||||| | |||| || ||||| |||||| | ||||||||||||||||||||    
T  21152510 gttatttttagcatgtttttcaattatttttagtaggattaagcagcaaaaaggaggagtattagaacgattgtct 21152585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 4340761 - 4340679
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtatta 291  Q
    ||||||| | ||||||||||||||| |||| ||||||||||   ||||||| ||||||||||||| |||||| | ||||||||    
T  4340761 tgatgacagatcatcttacgttatttttagtatgtttttcagatattttcagtaggttttagcagtaaaaaggaggagtatta 4340679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 19577562 - 19577628
Alignment:
Q  234 cttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||||||||| | | ||||||| ||||||||||||| |||||| | |||||||||||||||||    
T  19577562 cttagcatgttttttagttattttcagtaggttttagcagcaaaaaggaggagtattagaacgattg 19577628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 21760407 - 21760497
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    ||||||| ||||| |||| |||||||||||||| ||||||| ||||||||| |||  |||||||| |||||| | || |||||||| ||||    
T  21760407 tgatgacaggtcaccttaagttattcttagcatatttttcagtcattttcaatagaatttagcagcaaaaaggaggattattagaatgatt 21760497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 21687129 - 21687198
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||||  |||||||||||||||||||||||||||||||| ||| ||| | ||||||||| ||| ||||    
T  21687129 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaaa 21687198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 14727231 - 14727171
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| ||||||| | |||||||||    
T  14727231 tgatgacaggtcatcttacgttattattaccatgtttttcagtcatttttagtaggtttta 14727171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 22845862 - 22845942
Alignment:
Q  220 catcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||||||| ||||||||||||||||| | ||||||| || |||||| ||  |||||| | |||||||||||| ||||    
T  22845862 catcttacgttactcttagcatgtttttcagttattttcagtatgttttaacaacaaaaaggaggagtattagaacaattg 22845942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 23644318 - 23644386
Alignment:
Q  210 gatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||| ||| |||||||||||||||||||||||||||||||  |||| | ||||||||| ||| ||||    
T  23644318 gatgacaggttatcttacgttattcttagcatgtttttcaattgtttttagtaggttttaccagcaaaa 23644386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 30356360 - 30356300
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| |||||| || ||||||||||| ||||||||| | |||||||||||||||||||    
T  30356360 tgatgacaggtcattttgcgttattcttaacatgttttttagtcattttcattaggtttta 30356300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 9519819 - 9519745
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||||||||||| ||||||||||||| | | ||||||| |||  |||||||| |||||| | ||||||||||    
T  9519819 tcatcttacgttatttttagcatgttttttagttattttcagtagtatttagcagcaaaaaggaggagtattaga 9519745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 9841106 - 9841032
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||||||||||||||| ||||| ||| | ||||||||| ||||||||| ||| | |||| | ||||||||||    
T  9841106 tcatcttacgttattcttaacatgtgttttagtcattttcagtaggttttaccagcagaaaggaggagtattaga 9841032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 23087115 - 23087157
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttca 259  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  23087115 ggtcatcttacattattcttagtatgtttttcaatcattttca 23087157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 9848261 - 9848176
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||||  ||||| | |||||||||||| ||||||||||| ||||||| | |||||||||  || |||||| | ||||||||||    
T  9848261 atgatgacatgtcatttgacgttattcttaacatgtttttcagtcatttttagtaggttttattagcaaaaaggatgagtattaga 9848176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 21932572 - 21932487
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcat-taggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||| | |||||||| |||||||||||||||||||| || ||||||||| | |||||||  || |||||| | ||||||||||    
T  21932572 tgatgacggatcatcttaagttattcttagcatgttttttaaacattttcatgtgggttttaatagcaaaaaggaggagtattaga 21932487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 21845736 - 21845820
Alignment:
Q  217 ggtcatcttacgttattcttagcatg-tttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||  || |||||| |||||| || | || ||||| ||||||||    
T  21845736 ggtcatcttacgttattcttaacatgttttttcagtcattttcaaaagtttttagaagaaaagaggaggattattataacgattg 21845820  T

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Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 9338987 - 9339034
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggt 265  Q
    |||||||||||| ||||||| ||||||||||| ||||||||| |||||    
T  9338987 gtcatcttacgtcattcttaacatgtttttcagtcattttcaataggt 9339034  T

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Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 9387647 - 9387605
Alignment:
Q  207 tatgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||| || ||||||| |||||||||||||||||||||||||    
T  9387647 tatgataacaggtcatcctacgttattcttagcatgtttttca 9387605  T

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Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 13216314 - 13216364
Alignment:
Q  219 tcatcttacgttattcttagcatg-tttttcaatcattttcattaggtttt 268  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||||||||    
T  13216314 tcatcttacgttattcttagcatgttttttcagtcatttttaataggtttt 13216364  T

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Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Original strand, 17379470 - 17379500
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttca 249  Q
    |||||||||||||||||||||||||||||||    
T  17379470 tcatcttacgttattcttagcatgtttttca 17379500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 2588384 - 2588299
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||||||||| || ||||||| ||||||| ||||||||| | ||||||| ||  | |||  | |||||||||||| |||||||    
T  2588384 gtcatcttacgttgtttttagcatatttttcagtcattttcaattggttttaccaacataaaagatgagtattagaacaattgtct 2588299  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 14078135 - 14078050
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatca-ttttcattaggttttagcagaaaaaagcaagagtattaga 293  Q
    ||||||| ||||||||||| |||||||||||||| |||| | | | |||||| |||| |||||||| ||| || | ||||||||||    
T  14078135 tgatgacaggtcatcttacattattcttagcatggtttttagttatttttcagtaggatttagcagcaaagaggaggagtattaga 14078050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 19246373 - 19246304
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||||| |||||||| |||||||||| ||||||||||||| ||  ||| | ||||||||| ||| ||||    
T  19246373 tgatgacaggtcatctaacgttattctaagcatgtttttcagtctattttagtaggttttaacagcaaaa 19246304  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Complemental strand, 20080811 - 20080770
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||| |||||||||||||||||||||  ||||||||||    
T  20080811 atgatgacaggtcatcttacgttattcttataatgtttttca 20080770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 21037017 - 21036964
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagca 272  Q
    ||||||||||| ||||||| ||||||||||| | ||||| | ||||||||||||    
T  21037017 tcatcttacgtcattcttatcatgtttttcagttatttttagtaggttttagca 21036964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 24389169 - 24389210
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||| |||||||||||||||||||||  ||||||||||    
T  24389169 atgatgacaggtcatcttacgttattcttataatgtttttca 24389210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 17295704 - 17295764
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| || |||||||||||||||  |  |||||||||||| ||||||| |||||||||    
T  17295704 tgatgacaggacatcttacgttattcaaaatatgtttttcaataattttcaataggtttta 17295764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 18171253 - 18171293
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| ||||||||| | |||||||||||||||||||||    
T  18171253 tgatgacaggtcatcttgcattattcttagcatgtttttca 18171293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 19593975 - 19594067
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaa-tcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||  ||| ||||| |||| |||||||||||||||  | | ||||||| ||||||||||| | |||||| | |||||||||||| ||||    
T  19593975 tgatgacaagtcgtcttatgttaatcttagcatgtttttttagttattttcagtaggttttagctgcaaaaaggaggagtattagaacaattg 19594067  T

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Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 249
Target Start/End: Original strand, 31878856 - 31878888
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||||||| |||||||||||||||||||||    
T  31878856 ggtcatcttactttattcttagcatgtttttca 31878888  T

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Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 19912677 - 19912585
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgt 301  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||  | ||||||||||||||||||    
T  19912677 tgatgacaggtcatcttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaagaggagtattagaacgattgt 19912585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 300
Target Start/End: Complemental strand, 12517388 - 12517296
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||| ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| || |||||| | ||||||||||| |||||    
T  12517388 atgatgacaggtcatcttacgttattcttagcatctttttcagtcattttcagtaggttttagtagcaaaaaggaggagtattagaatgattg 12517296  T

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Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 16242194 - 16242284
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||| | || ||||||||||||||||| | |||||||||||||||||    
T  16242194 tgatgacaggtcatcttacgttattcttagcatatttttcactcatttttagta-gttttagcagaaaaaagaaggagtattagaacgattg 16242284  T

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Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 34276437 - 34276528
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||| |||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||| | |||||||| ||||||||    
T  34276437 tgatgacaggtcattttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattataacgattg 34276528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 12771210 - 12771292
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||| |||||  | ||||||||||||||||    
T  12771210 ggtcatcttacgttattcttagcatgtttttcagtcattttcagtatattttagcagcaaaaatgatgagtattagaacgatt 12771292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 52935541 - 52935602
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  52935541 ggtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccagcaaaa 52935602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 7805839 - 7805779
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  7805839 tgatgacaggtcatcttacgttattcttagcatgtttttcaatcattttcagtatgtttta 7805779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 8145342 - 8145254
Alignment:
Q  212 tgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| |||||  | |||||||| ||| ||||    
T  8145342 tgacaggtcatcttacattattcttagcatgtttttcaatcaatttcagtaggttttagcagcaaaaatgaggagtattaaaacaattg 8145254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 8765761 - 8765681
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| | |||||  | ||||||||||||||||    
T  8765761 tcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatt 8765681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 299
Target Start/End: Complemental strand, 8770651 - 8770571
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| | |||||  | ||||||||||||||||    
T  8770651 tcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatt 8770571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 20886965 - 20886905
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  20886965 tgatgacaggtcatcttacgttattcttagcatgtttttcaatcgttttcaataggtttta 20886905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 13938846 - 13938937
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||| ||||||||||||||||||||| || || || ||||| ||||||||||||  |||||| | |||||||||||||||||    
T  13938846 tgatgacaggtcattttacgttattcttagcatgttgttaaagcaatttcagtaggttttagcaccaaaaaggaggagtattagaacgattg 13938937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 18457111 - 18457202
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||||||||| ||||||||| ||||| |||| | ||||||| ||||||||||||| |||||| | |||||||||||| ||||    
T  18457111 tgatgacaggtcatcttacgctattcttaggatgttattcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaattg 18457202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 12372344 - 12372418
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaac 295  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||||||||  || |||||| | ||||||||||||    
T  12372344 atcttacgtaattcttagcatttttttcaatcattttcagtaggttttacgagcaaaaaggaggagtattagaac 12372418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 22470402 - 22470471
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||||  |||||||||||||||||||||||||||||||| ||||||||| || |||||| ||| ||||    
T  22470402 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttaccagcaaaa 22470471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 819854 - 819906
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  819854 ggtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggtttta 819906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 8115305 - 8115385
Alignment:
Q  220 catcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||||||||| |||||||||||| || | ||||| | |||||||||| || |||||| | |||||||||||||||||    
T  8115305 catcttacgttatttttagcatgttttccagttattttgagtaggttttagtagcaaaaaggaggagtattagaacgattg 8115385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 22450538 - 22450486
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  22450538 ggtcatcttacgttattcttagcatgcttttcagtcgttttcattaggtttta 22450486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 25850947 - 25851039
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||| ||| |||||||||| |||||||||||||||||||||| | ||||| | |||| |||||||| | |||| | |||||||| ||||||||    
T  25850947 atgaagacaggtcatcttatgttattcttagcatgtttttcagttatttttagtaggatttagcagcagaaaggaggagtattaaaacgattg 25851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 31283903 - 31283963
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| |||||||| |||||||||||| ||||||||||||||||||| | |||||||||    
T  31283903 tgatgacaggtcatctaacgttattcttatcatgtttttcaatcattttaagtaggtttta 31283963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 1096761 - 1096851
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||||||||||||||||| |||||||||| | ||||||||| |  |||||||||| |||||| | || || |||||||||||    
T  1096761 tgatgacaggtcatcttacgttattctttgcatgttttt-agtcattttcagtcagttttagcagcaaaaaggaggattactagaacgattg 1096851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 18535867 - 18535807
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||  |||||||||||||||||||||||||||||||| ||| ||| | |||||||||    
T  18535867 tgatgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggtttta 18535807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 20891653 - 20891705
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||||||||||||| ||||||| || |||||| |||||||||    
T  20891653 ggtcatcttacgttattcttagcatatttttcagtcgttttcagtaggtttta 20891705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 22247084 - 22247025
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||| ||||    
T  22247084 gtcatcttacgttattcttagcat-tttttcagtcattttcagtaggttttaccagcaaaa 22247025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 2166035 - 2166125
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||  |||||||||||| ||||||||||   ||||||||| ||||||||||||  |||||| | |||||||| ||||||||    
T  2166035 tgatgacaggtcatgatacgttattcttggcatgttttttg-tcattttcagtaggttttagcaacaaaaaggaggagtattaaaacgattg 2166125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 2508728 - 2508779
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || ||||||    
T  2508728 gtcatcttacgttattcttagtatgtttttcagtcattttcagtaagtttta 2508779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 16228344 - 16228384
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| |||||||||||||||||||||||||| ||||||    
T  16228344 tgatgacaggtcatcttacgttattcttagcatgcttttca 16228384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 18735301 - 18735335
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgt 243  Q
    ||||||| |||||||||||||||||||||||||||    
T  18735301 tgatgacaggtcatcttacgttattcttagcatgt 18735335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 21740566 - 21740516
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||| | || |||||||||||| ||||||||||| |||||    
T  21740566 tcatcttacgttattttaagtatgtttttcaattattttcattagatttta 21740516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 26093002 - 26092952
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttca 259  Q
    |||||||  |||||||||| ||||||||||||| ||||||||| |||||||    
T  26093002 tgatgacatgtcatcttacattattcttagcatatttttcaattattttca 26092952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 3114717 - 3114778
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||| | |||||||||||||||||||||||| || ||| || ||||||||| ||| ||||    
T  3114717 ggtcatgtgacgttattcttagcatgtttttcagtcttttacagtaggttttaccagcaaaa 3114778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 19170162 - 19170211
Alignment:
Q  230 tattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaa 279  Q
    |||||||||||||||||||  ||| ||||| | |||||||||||||||||    
T  19170162 tattcttagcatgtttttcggtcaatttcagttggttttagcagaaaaaa 19170211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 19533869 - 19533829
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| | ||||||||||||||||||||||| |||||||    
T  19533869 tgatgacagatcatcttacgttattcttagcatatttttca 19533829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 20021817 - 20021857
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||  |||||||||||||| |||||||||||||||||    
T  20021817 tgatgacatgtcatcttacgttactcttagcatgtttttca 20021857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 25530743 - 25530779
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  25530743 atcttacgttattcttagcatatttttcagtcatttt 25530779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 249
Target Start/End: Complemental strand, 27074041 - 27074009
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||||||||||||| |||||||||||||||    
T  27074041 ggtcatcttacgttatttttagcatgtttttca 27074009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 27412658 - 27412698
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||  |||||||||||||||| |||||||||||||||    
T  27412658 tgatgacaagtcatcttacgttatttttagcatgtttttca 27412698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 27852603 - 27852663
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||  ||| |||||||||||| ||||||||| ||| | ||||||||| |||||||||    
T  27852603 tgatgacatgtcgtcttacgttatttttagcatgtcttttagtcattttcagtaggtttta 27852663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 15166565 - 15166474
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| |||||  | |||||||||||||||||    
T  15166565 tgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggttttagcagcaaaaacgaggagtattagaacgattg 15166474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 7583876 - 7583798
Alignment:
Q  222 tcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| | |||||||||||| ||||    
T  7583876 tcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaattg 7583798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 17335355 - 17335446
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||  ||||||||||||||||||| |||||||||||| ||||||||| || ||||||| || |||||| | |||||||||||||||||    
T  17335355 tgatgacatgtcatcttacgttattcttggcatgtttttcagtcattttcagtaagttttagaagcaaaaaggaggagtattagaacgattg 17335446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 22171845 - 22171754
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||| ||||||||||||||||||||    ||||||||||||||||||||| |||||| | ||||||||||| |||||    
T  22171845 tgatgacaggtcatcttacattattcttagcatgtttttctgctattttcattaggttttagcagcaaaaaggaggagtattagaatgattg 22171754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 303
Target Start/End: Complemental strand, 11782581 - 11782495
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||||||||||||||||| ||||||||| | ||||||| | ||||||||  ||| |||||| ||||||||||||||||||||||    
T  11782581 ggtcatcttacgttattcttaacatgttttttagtcattttaagtaggtttttacagcaaaaagtaagagtattagaacgattgtct 11782495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 8968080 - 8968161
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgatt 299  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||||  ||||  |||||||||||    
T  8968080 gtcatcttacgttattcttagcatgtttttcagtcattttaagtaggttttagcagcaaaaagatagagatttagaacgatt 8968161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 291
Target Start/End: Original strand, 9536756 - 9536837
Alignment:
Q  210 gatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtatta 291  Q
    |||||| |||| ||||| |||||||||||||||||||||||| ||||||| ||||||||||||| |||||| | ||||||||    
T  9536756 gatgacaggtcctcttatgttattcttagcatgtttttcaattattttcagtaggttttagcagcaaaaaggaggagtatta 9536837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 19556537 - 19556603
Alignment:
Q  205 aatatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagca 272  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  19556537 aatatgatgacaggtcatcttacgttattcttagcatg-ttttcagtcattttcaataggttttagca 19556603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 12616811 - 12616725
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaac 295  Q
    |||||||  |||||||||||| ||||||| ||||||||||| || |||||| ||||||||||||| |||||| | ||||||||||||    
T  12616811 tgatgacatgtcatcttacgtaattcttaacatgtttttcagtctttttcagtaggttttagcagcaaaaaggatgagtattagaac 12616725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 25025203 - 25025134
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||| ||||    
T  25025203 tgatgacaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaa 25025134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 10106381 - 10106298
Alignment:
Q  220 catcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||| ||||||||||||||||||||  ||||||||| ||||||||||| | |||||| | |||||||| ||| |||||||    
T  10106381 catcttacattattcttagcatgtttttctgtcattttcagtaggttttagctgcaaaaaggaggagtattacaacaattgtct 10106298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 17711403 - 17711312
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||  |||| ||||||||||||||||||| | ||||||||| ||||||||||| | |||||  | |||||||||||||||||    
T  17711403 tgatgacaggtcaaattacattattcttagcatgttttttagtcattttcagtaggttttagctgcaaaaatgaggagtattagaacgattg 17711312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 9849707 - 9849767
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| |||||||||||||||||||||| |||||||||| ||||||| | |||||||||    
T  9849707 tgatgacaggtcatcttacgttattcttagtatgtttttcagtcatttttagtaggtttta 9849767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 17434531 - 17434471
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||| ||||||||||||||||| ||||||||||||| | ||||||||| |||||||||    
T  17434531 tgatgacaggtcatcttacgttatttttagcatgtttttaagtcattttcagtaggtttta 17434471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 11252129 - 11252220
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||||||| ||||||||||||||| |   ||| | |||| ||||||| ||||||  | |||||||||||||||||    
T  11252129 tgatgacaggtcatcttacgttatttttagcatgtttttcagtttattttagtaggatttagcaaaaaaaaaaaggagtattagaacgattg 11252220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 17218617 - 17218535
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||||||||||||||||||||||||||||| |||  |||| || ||||| | || |||||| | |||||||||||||||||    
T  17218617 ggtcatcttacgttattcttagcatgtttttcagtca-attcagtaagttttcgaagcaaaaaggaggagtattagaacgattg 17218535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 13588795 - 13588745
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| |||||    
T  13588795 tcatcttacgttattattagcatgtttttcaatcattttcagtagatttta 13588745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 16669733 - 16669781
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  16669733 atctgacgttattcttagcatgtttttcaatcaatttcagtaggtttta 16669781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 12836080 - 12836118
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  12836080 tcatcttacgttattcttagcatgtttttcagtcatttt 12836118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 16928993 - 16928927
Alignment:
Q  237 agcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||||||||| ||||||||| ||||||||||| | |||||  | ||||||||||| ||||||||    
T  16928993 agcatgtttttcagtcattttcagtaggttttagcggcaaaaatgaggagtattagaatgattgtct 16928927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 19883522 - 19883572
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||| |||||||| ||||||||| |||||||||| |||||||||    
T  19883522 tcatcttacgtaattcttagtatgtttttcgatcattttcagtaggtttta 19883572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 9054090 - 9054042
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||| |||||||||||||| || ||||||||| |||||||||    
T  9054090 atcttacgttaatcttagcatgttttgcagtcattttcagtaggtttta 9054042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 17277942 - 17277902
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  17277942 tgatgacatgtcatcttacgttattcttagcatgtttttca 17277902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 19666949 - 19666989
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  19666949 tgatgaccgatcatcttacgttattcttagcatatttttca 19666989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 20828152 - 20828208
Alignment:
Q  222 tcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||||||||||||||||| ||||||| || |||||| ||||| ||||||| ||||    
T  20828152 tcttacgttattcttagcatctttttcagtctttttcaataggtattagcagcaaaa 20828208  T

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Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 4617191 - 4617153
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgttttt 247  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  4617191 tgatgacaggtcatcttacgttattcttagcttgttttt 4617153  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 9263362 - 9263444
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||||||||| ||||||||||||||| |||  |||| ||||||||| ||| | ||   | |||||||||||| |||||||    
T  9263362 atcttacgttatttttagcatgtttttcagtcaaattcaataggttttatcagcagaactgaggagtattagaacaattgtct 9263444  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 15047854 - 15047804
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||| ||||||||||||| |||||||||||| ||| ||||| |||||||||    
T  15047854 tcattttacgttattcttggcatgtttttcagtcaatttcagtaggtttta 15047804  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 15106570 - 15106620
Alignment:
Q  219 tcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||| ||||||||||||| |||||||||||| ||| ||||| |||||||||    
T  15106570 tcattttacgttattcttggcatgtttttcagtcaatttcagtaggtttta 15106620  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 10432246 - 10432181
Alignment:
Q  238 gcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||||||| | ||||| ||||||||| ||||| |||||  | |||||||||||| |||||||    
T  10432246 gcatgtttttcagttattttaattaggtttcagcagcaaaaatgaggagtattagaactattgtct 10432181  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 19335224 - 19335273
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    |||||||| | ||||||||||||||||||||||| ||||| | |||||||    
T  19335224 atgatgacagatcatcttacgttattcttagcatattttttagtcatttt 19335273  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 8928313 - 8928361
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcatttt 257  Q
    |||||||  |||||||||||||||| ||||||| ||||||| |||||||    
T  8928313 tgatgacatgtcatcttacgttatttttagcatatttttcagtcatttt 8928361  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 10239765 - 10239725
Alignment:
Q  207 tatgatgaccggtcatcttacgttattcttagcatgttttt 247  Q
    ||||||||| || |||||||||||||| |||||||||||||    
T  10239765 tatgatgacaggacatcttacgttatttttagcatgttttt 10239725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 19919139 - 19919179
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttca 249  Q
    ||||||| | |||||| ||||||||||||||||||||||||    
T  19919139 tgatgacagatcatctgacgttattcttagcatgtttttca 19919179  T

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Target: scaffold0016 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 4913 - 4830
Alignment:
Q  217 ggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||| ||||| ||||||| |||||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||||||||    
T  4913 ggtcgtcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattg 4830  T

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Target: scaffold0043 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 88436 - 88505
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||    
T  88436 tgatgacatgtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccaaaaaaa 88505  T

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Target: scaffold0014 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 192219 - 192128
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| ||||||||||||||||| |||||||| |||||| ||||||||| ||||||||||||| |||| | | |||| ||||| ||||||    
T  192219 tgatgacaggtcatcttacgttatttttagcatggttttcagtcattttcaataggttttagcagcaaaatgaaggagtgttagagcgattg 192128  T

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Target: scaffold0056 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 23133 - 23042
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| |||||||||| | |||||||||||||| ||||| | ||||| ||||||| ||||||  |||||| | |||||||||||||||||    
T  23133 tgatgacaggtcatcttatgctattcttagcatgtatttcagttattttaattaggtgttagcaccaaaaaggaggagtattagaacgattg 23042  T

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Target: scaffold0555 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 6538 - 6456
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    ||||||||||||||||||||||||||||| | ||||||| |||| |||||||  |||||  | ||||||||||||||| ||||    
T  6538 atcttacgttattcttagcatgtttttcagttattttcaataggatttagcaacaaaaatgaggagtattagaacgatcgtct 6456  T

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Target: scaffold0258 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 20252 - 20343
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||  ||||||||||||||||||||||||||||||||||  | || | ||||   |||||| |||||| | |||||||||||||||||    
T  20252 tgatgacaagtcatcttacgttattcttagcatgtttttcaattttatttagtaggaaatagcagcaaaaaggaggagtattagaacgattg 20343  T

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Target: scaffold0115 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 36143 - 36191
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  36143 atcttacgttattcttatcatgtttttcagtcattttcaataggtttta 36191  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 35263 - 35215
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||    
T  35263 atcttatgttattcttagcatgtttttcagtcattttcaataggtttta 35215  T

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Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 24890 - 24839
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||| |||||||||||||||||||||| ||||||| | |||||||||    
T  24890 gtcatcttatgttattcttagcatgtttttcagtcattttgaataggtttta 24839  T

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Target: scaffold0451 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 303
Target Start/End: Complemental strand, 5828 - 5733
Alignment:
Q  208 atgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattgtct 303  Q
    |||||||  ||||||||| ||||||| ||| ||||||||||| | ||||| | |||| ||||| || |||||| | |||||||||||| |||||||    
T  5828 atgatgaaaggtcatctttcgttatttttaacatgtttttcagttatttttagtaggatttagaagcaaaaaggaggagtattagaacaattgtct 5733  T

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Target: scaffold0386 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 4881 - 4932
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||||||||||||||||||||||||| ||| ||| | |||||||||    
T  4881 gtcatcttacgttattcttagcatgtttttcagtcaattttagtaggtttta 4932  T

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Target: scaffold0386; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 13483 - 13534
Alignment:
Q  218 gtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||  |||||||||||||||||||||||| ||| | |||||||||    
T  13483 gtcatcttacaatattcttagcatgtttttcaatcaattttagtaggtttta 13534  T

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Target: scaffold0111 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 21537 - 21446
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    ||||||| | |||||||||| ||||||||  |||||||||| | | ||||| ||||||||||||| |||||| | ||||| |||||| ||||    
T  21537 tgatgacagatcatcttacgatattcttacgatgtttttcagttaatttcagtaggttttagcagcaaaaaggatgagtagtagaacaattg 21446  T

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Target: scaffold0032 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 92840 - 92898
Alignment:
Q  221 atcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaaa 279  Q
    ||||||||||||||||||||||||||||| | ||||| | |||| |||||||| |||||    
T  92840 atcttacgttattcttagcatgtttttcagttatttttagtagggtttagcagcaaaaa 92898  T

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Target: scaffold0072 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 38388 - 38329
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttt 268  Q
    ||||||| ||||| |||||| |||||||||||||||| ||| | ||||||| ||||||||    
T  38388 tgatgacaggtcaccttacgctattcttagcatgtttgtcagttattttcagtaggtttt 38329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 12309 - 12267
Alignment:
Q  227 cgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    ||||||||||||||||||||||||||| ||| | |||||||||    
T  12309 cgttattcttagcatgtttttcaatcaattttagtaggtttta 12267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0871 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 4054 - 4017
Alignment:
Q  210 gatgaccggtcatcttacgttattcttagcatgttttt 247  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  4054 gatgacaggtcctcttacgttattcttagcatgttttt 4017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 41435 - 41367
Alignment:
Q  209 tgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggttttagcagaaaaa 278  Q
    ||||||| | |||||||| |||||||||||||||||||||| | ||||| | ||||||||| ||| ||||    
T  41435 tgatgacagctcatctta-gttattcttagcatgtttttcagttatttttagtaggttttaccagcaaaa 41367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 7487 - 7423
Alignment:
Q  205 aatatgatgaccggtcatcttacgttattcttagcatgtttttcaatcattttcattaggtttta 269  Q
    |||||||||||  |||| ||||| ||||| | ||||||||||||| ||||||| | |||||||||    
T  7487 aatatgatgacatgtcaacttacattattgtaagcatgtttttcagtcatttttagtaggtttta 7423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 95690 - 95630
Alignment:
Q  240 atgtttttcaatcattttcattaggttttagcagaaaaaagcaagagtattagaacgattg 300  Q
    |||||||||| ||| ||||| | ||||||||||| |||||  | |||||||||||||||||    
T  95690 atgtttttcagtcaatttcaatgggttttagcagcaaaaaagaggagtattagaacgattg 95630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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