View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11877_low_1 (Length: 790)

Name: NF11877_low_1
Description: NF11877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11877_low_1
NF11877_low_1
[»] chr3 (31 HSPs)
chr3 (12-610)||(21092349-21092951)
chr3 (159-302)||(31500307-31500450)
chr3 (720-774)||(21092185-21092239)
chr3 (720-774)||(14899620-14899674)
chr3 (720-773)||(2368758-2368811)
chr3 (80-129)||(31500239-31500288)
chr3 (721-774)||(45702258-45702311)
chr3 (720-772)||(22102235-22102287)
chr3 (720-772)||(22177183-22177235)
chr3 (720-763)||(51834103-51834146)
chr3 (720-774)||(35863893-35863947)
chr3 (720-774)||(41923155-41923209)
chr3 (721-774)||(28391113-28391166)
chr3 (721-774)||(35378893-35378946)
chr3 (720-772)||(17438954-17439006)
chr3 (730-774)||(21824628-21824672)
chr3 (722-774)||(32560000-32560052)
chr3 (720-767)||(39904150-39904197)
chr3 (720-774)||(15569549-15569603)
chr3 (720-758)||(18722374-18722412)
chr3 (720-774)||(21789943-21789997)
chr3 (720-774)||(27400255-27400309)
chr3 (721-767)||(28213093-28213139)
chr3 (720-774)||(38602032-38602086)
chr3 (720-774)||(42897004-42897058)
chr3 (720-758)||(51834000-51834038)
chr3 (721-758)||(4617373-4617410)
chr3 (721-758)||(21030808-21030845)
chr3 (733-774)||(44822123-44822164)
chr3 (721-774)||(50650657-50650710)
chr3 (721-774)||(51005990-51006043)
[»] chr7 (16 HSPs)
chr7 (720-774)||(21093818-21093872)
chr7 (720-774)||(48525737-48525791)
chr7 (720-774)||(21094216-21094270)
chr7 (720-774)||(21635172-21635226)
chr7 (720-774)||(27724977-27725031)
chr7 (720-774)||(39434743-39434797)
chr7 (720-772)||(23050288-23050340)
chr7 (720-767)||(20034767-20034814)
chr7 (720-767)||(27241322-27241369)
chr7 (720-774)||(34729006-34729060)
chr7 (720-774)||(37546601-37546655)
chr7 (720-765)||(2275911-2275956)
chr7 (721-774)||(6474978-6475031)
chr7 (721-774)||(12170348-12170401)
chr7 (720-765)||(20045178-20045223)
chr7 (733-774)||(25801645-25801686)
[»] chr4 (27 HSPs)
chr4 (721-774)||(26005871-26005924)
chr4 (720-774)||(43317427-43317481)
chr4 (720-774)||(5661906-5661960)
chr4 (720-774)||(12214770-12214824)
chr4 (720-774)||(13204572-13204625)
chr4 (720-774)||(19438034-19438088)
chr4 (720-774)||(27104081-27104135)
chr4 (720-774)||(34857814-34857868)
chr4 (720-774)||(49358036-49358090)
chr4 (721-774)||(29096854-29096907)
chr4 (721-774)||(50412741-50412794)
chr4 (721-772)||(15742567-15742618)
chr4 (720-767)||(15849358-15849405)
chr4 (720-767)||(34658384-34658431)
chr4 (720-774)||(143652-143706)
chr4 (720-774)||(4959108-4959162)
chr4 (720-774)||(6385220-6385274)
chr4 (720-774)||(20702172-20702226)
chr4 (720-774)||(42713304-42713358)
chr4 (720-774)||(43491287-43491341)
chr4 (720-774)||(54162533-54162587)
chr4 (733-774)||(9162760-9162801)
chr4 (720-765)||(9162900-9162945)
chr4 (721-774)||(13265376-13265429)
chr4 (729-774)||(20714086-20714131)
chr4 (721-774)||(27551255-27551308)
chr4 (721-774)||(37830721-37830774)
[»] chr8 (16 HSPs)
chr8 (720-774)||(16822943-16822997)
chr8 (720-767)||(36343452-36343499)
chr8 (720-758)||(19369037-19369075)
chr8 (720-774)||(28773456-28773510)
chr8 (721-767)||(33099979-33100025)
chr8 (722-774)||(34966513-34966565)
chr8 (720-767)||(21307339-21307386)
chr8 (731-774)||(43922052-43922095)
chr8 (720-773)||(2692245-2692299)
chr8 (721-767)||(4856414-4856460)
chr8 (720-774)||(9280059-9280113)
chr8 (720-774)||(15898638-15898692)
chr8 (720-758)||(24023601-24023639)
chr8 (720-774)||(26527891-26527945)
chr8 (720-774)||(28969848-28969902)
chr8 (721-774)||(9884939-9884992)
[»] chr5 (11 HSPs)
chr5 (720-774)||(24007317-24007371)
chr5 (721-774)||(32904662-32904715)
chr5 (721-774)||(43369951-43370004)
chr5 (720-767)||(15988484-15988531)
chr5 (720-767)||(28868012-28868059)
chr5 (720-774)||(16539110-16539164)
chr5 (720-774)||(17065126-17065180)
chr5 (720-774)||(38938741-38938795)
chr5 (720-749)||(19126424-19126453)
chr5 (721-774)||(19650521-19650574)
chr5 (721-766)||(28002508-28002553)
[»] chr1 (26 HSPs)
chr1 (720-774)||(37706232-37706286)
chr1 (720-774)||(4972532-4972586)
chr1 (720-774)||(16424293-16424347)
chr1 (720-774)||(34969547-34969601)
chr1 (721-767)||(40402444-40402490)
chr1 (720-774)||(48995644-48995698)
chr1 (721-774)||(22094166-22094219)
chr1 (721-774)||(25172314-25172367)
chr1 (720-765)||(27307887-27307932)
chr1 (720-774)||(8007255-8007310)
chr1 (720-767)||(8096019-8096066)
chr1 (720-763)||(50231416-50231459)
chr1 (720-774)||(773568-773622)
chr1 (721-767)||(4967330-4967376)
chr1 (720-774)||(10172179-10172233)
chr1 (720-766)||(12264791-12264837)
chr1 (720-774)||(17605576-17605630)
chr1 (720-774)||(21335973-21336027)
chr1 (724-774)||(24162647-24162697)
chr1 (728-774)||(33193699-33193745)
chr1 (724-774)||(49162506-49162556)
chr1 (725-774)||(1570443-1570491)
chr1 (721-774)||(2665991-2666044)
chr1 (721-774)||(10844463-10844516)
chr1 (720-765)||(11408803-11408848)
chr1 (721-774)||(14245813-14245866)
[»] chr2 (18 HSPs)
chr2 (721-774)||(33312780-33312833)
chr2 (720-767)||(24005299-24005346)
chr2 (720-774)||(3357919-3357973)
chr2 (720-774)||(7061752-7061806)
chr2 (721-767)||(8063218-8063264)
chr2 (720-774)||(13596259-13596313)
chr2 (720-774)||(19901584-19901638)
chr2 (720-774)||(21956550-21956603)
chr2 (720-774)||(24004782-24004835)
chr2 (720-774)||(27649139-27649193)
chr2 (720-774)||(35156082-35156136)
chr2 (720-767)||(629424-629471)
chr2 (720-774)||(38702431-38702485)
chr2 (720-774)||(40499549-40499603)
chr2 (733-774)||(309750-309791)
chr2 (733-774)||(13594417-13594458)
chr2 (721-758)||(24896341-24896378)
chr2 (721-774)||(33676934-33676987)
[»] scaffold0014 (1 HSPs)
scaffold0014 (720-774)||(21309-21363)
[»] chr6 (7 HSPs)
chr6 (720-774)||(2485690-2485744)
chr6 (720-774)||(11323145-11323199)
chr6 (721-774)||(20730161-20730214)
chr6 (720-774)||(927757-927811)
chr6 (720-774)||(14894667-14894721)
chr6 (720-758)||(14910073-14910111)
chr6 (720-774)||(35219426-35219480)
[»] scaffold0031 (1 HSPs)
scaffold0031 (720-767)||(47416-47463)
[»] scaffold0086 (1 HSPs)
scaffold0086 (721-774)||(48348-48401)


Alignment Details
Target: chr3 (Bit Score: 511; Significance: 0; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 511; E-Value: 0
Query Start/End: Original strand, 12 - 610
Target Start/End: Complemental strand, 21092951 - 21092349
Alignment:
Q  12 atcaccaaacaccaaaaatgttattgagaagaagcaccgattgaacaaccaacaatgattcaattccaatgaaagaattggcacgatggaaattaaaata 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21092951 atcaccagacaccaaaaatgttattgagaagaagcaccgattgaacaaccaacaatgattcaattccaatgaaagaattggcacgatggaaattaaa-ta 21092853  T
Q  112 attggaacaatggcttggtaaccgattgga-gataatagatcaaaaattgtaattgaagctactagatccaaaattagtgtgaaacgtaaagccaaatgg 210  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21092852 attggaacaatggcttggtaaccaattggatgataatagatcaaaaattgtaattgaagctactagatccaaaattagtgtgaaacgtaaagccaaatgg 21092753  T
Q  211 aatatatttgaataagctgtgttggatttgtgaattgaaatggttaaatttagttggtagatggcgcacatgctagaaaccctagcacaacggaaaatgt 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  21092752 aatatatttgaataagctgtgttggatttgtgaattgaaatggttaaatttagttggtagacggcgcacatgctagaaaccctagcacaatggaaaatgt 21092653  T
Q  311 ttattgccgcattatatttgttgatgaactatgttgttctacgacctagtatgtcttgtgcaagggaaaatgttttttcggtaataatatatttcatttt 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21092652 ttattgccgcattatatttgttgatgaactatgttgttctacgacctagtatgtcttgtgcaagggaaaatgttttttcggtaataatatatttcatttt 21092553  T
Q  411 gcattgctcagaaaaaatatataatccttattatcgggtaaaataatatttctttataatacatgataatattatgacaattcaagttaatttga---nn 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||         
T  21092552 gcattgctcagaaaaaatatataatccttattatcgggtaaaataatatttttttataatacatgataatattatgacaagtcaagttaatttgattttt 21092453  T
Q  508 nnnnnnngttgagagaatagtaatattagtga-ttgatttaccaatacaattttataaagggataatgttgggtattcaactattttcttttattgattt 606  Q
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21092452 tttttttgttgagagaatagtaatattagtgatttgatttaccaatacaattttataaagggataatgttgggtattcaactattttcttttattaattt 21092353  T
Q  607 agtg 610  Q
    ||||    
T  21092352 agtg 21092349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 159 - 302
Target Start/End: Original strand, 31500307 - 31500450
Alignment:
Q  159 tgtaattgaagctactagatccaaaattagtgtgaaacgtaaagccaaatggaatatatttgaataagctgtgttggatttgtgaattgaaatggttaaa 258  Q
    ||||||||||| |||| ||||||||||||  |||||||||||| ||||||||| |||| ||||||||   ||| || ||||||||||||||||||| |||    
T  31500307 tgtaattgaagttactggatccaaaattaaagtgaaacgtaaaaccaaatggattataattgaataaatggtgctgaatttgtgaattgaaatggtaaaa 31500406  T
Q  259 tttagttggtagatggcgcacatgctagaaaccctagcacaacg 302  Q
    ||| ||| ||  | |||||||||||||| | |||||||||||||    
T  31500407 tttggttagtgaacggcgcacatgctaggagccctagcacaacg 31500450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 21092239 - 21092185
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21092239 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 21092185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 14899620 - 14899674
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  14899620 caaaaataccctcaattttgaatacaaataacacatgtaacaaatagataagaat 14899674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 720 - 773
Target Start/End: Complemental strand, 2368811 - 2368758
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaa 773  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| |||||    
T  2368811 caaaaataccctcaattttcaatacaaataacacatgtaacaaatagataagaa 2368758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 31500239 - 31500288
Alignment:
Q  80 atgaaagaattggcacgatggaaattaaaataattggaacaatggcttgg 129  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  31500239 atgaaagaattggcacggtgaaaattaaaacaattggaacaatggcttgg 31500288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 721 - 774
Target Start/End: Complemental strand, 45702311 - 45702258
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||| ||||||    
T  45702311 aaaaatatcctcaattttaaatacaaataacacatgtaacaaatagataagaat 45702258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 720 - 772
Target Start/End: Original strand, 22102235 - 22102287
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaaga 772  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| ||||    
T  22102235 caaaaataccctcaattttcaatacaaataacacatgtaacaaatagataaga 22102287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 720 - 772
Target Start/End: Original strand, 22177183 - 22177235
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaaga 772  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| ||||    
T  22177183 caaaaataccctcaattttcaatacaaataacacatgtaacaaatagataaga 22177235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 720 - 763
Target Start/End: Complemental strand, 51834146 - 51834103
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaa 763  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  51834146 caaaaataccctcaattttcaatacaaatagcacatgtaacaaa 51834103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 35863947 - 35863893
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| |||| ||||||||||||||||| |||||||| |||||||| ||||||    
T  35863947 caaaaatgcccttaattttaaatacaaataacacatgtaacaaatagataagaat 35863893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 41923155 - 41923209
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||| || |||||||||| |||||||| |||||||| ||||||    
T  41923155 caaaaataccctcaatattcaatacaaataacacatgtaacaaatagataagaat 41923209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 28391113 - 28391166
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||| |||||||||| ||||| ||  ||||||||||||||    
T  28391113 aaaaataccctcaatttttaatacaaataacacatataataaatagacaagaat 28391166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 35378893 - 35378946
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||| |||||||||| |||||||| |||||| | ||||||    
T  35378893 aaaaataccctcaattttcaatacaaataacacatgtaacaaataaataagaat 35378946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 720 - 772
Target Start/End: Complemental strand, 17439006 - 17438954
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaaga 772  Q
    ||||| ||||||||||||| |||||||||| |||||||| |||||||| ||||    
T  17439006 caaaattaccctcaattttcaatacaaataacacatgtaacaaatagataaga 17438954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 730 - 774
Target Start/End: Complemental strand, 21824672 - 21824628
Alignment:
Q  730 ctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||    
T  21824672 ctcaattttaaatacaaataacacatgtaacaaatagataagaat 21824628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 774
Target Start/End: Original strand, 32560000 - 32560052
Alignment:
Q  722 aaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||| |||||||||| |||||||| ||| |||| ||||||    
T  32560000 aaaataccctcaattttcaatacaaataacacatgtaacaattagataagaat 32560052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Complemental strand, 39904197 - 39904150
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||||||| ||||||| |||||||||| |||||||| ||||||||    
T  39904197 caaaaatacccacaattttcaatacaaataacacatgtaacaaataga 39904150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 15569549 - 15569603
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||| ||||| |||||||| |||||| | ||||||    
T  15569549 caaaaataccctcaatttttaatataaataacacatgtaacaaataaataagaat 15569603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 758
Target Start/End: Complemental strand, 18722412 - 18722374
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgta 758  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  18722412 caaaaataccctcaattttcaatacaaataacacatgta 18722374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 21789997 - 21789943
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| ||||||||||| |||||||||| |||||||| |||||| | ||||||    
T  21789997 caaaaatgccctcaattttcaatacaaataacacatgtaacaaatacataagaat 21789943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 27400309 - 27400255
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| | |||||||| |||||||| |||||||| ||||||    
T  27400309 caaaaataccctaaatttttactacaaataacacatgtaacaaatagataagaat 27400255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 721 - 767
Target Start/End: Complemental strand, 28213139 - 28213093
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    |||||||| || ||||||||||||||||| ||||| |||||||||||    
T  28213139 aaaaatactcttaattttaaatacaaataacacatatagcaaataga 28213093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 38602086 - 38602032
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| ||||||||||| |||| ||||| |||||||| |||||||| ||||||    
T  38602086 caaaaatgccctcaattttcaatataaataacacatgtaacaaatagataagaat 38602032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 42897058 - 42897004
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| ||||||||||||||||  |||||||| |||||| | ||||||    
T  42897058 caaaaatacccttaattttaaatacaaatcacacatgtaacaaatatataagaat 42897004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 758
Target Start/End: Complemental strand, 51834038 - 51834000
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgta 758  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  51834038 caaaaataccctcaattttcaatacaaataacacatgta 51834000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 758
Target Start/End: Complemental strand, 4617410 - 4617373
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgta 758  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  4617410 aaaaataccctcaattttcaatacaaataacacatgta 4617373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 758
Target Start/End: Complemental strand, 21030845 - 21030808
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgta 758  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  21030845 aaaaataccttcaattttcaatacaaatagcacatgta 21030808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 774
Target Start/End: Original strand, 44822123 - 44822164
Alignment:
Q  733 aattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||| |||||||| |||||||| ||||||    
T  44822123 aattttaaatacaaataacacatgtaacaaatagataagaat 44822164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 50650657 - 50650710
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||| |||||| |||||||||  |||||||| |||||| ||||||||    
T  50650657 aaaaatacccttaattttcaatacaaattacacatgtaacaaatatacaagaat 50650710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 51005990 - 51006043
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||| |||||||||||| |||||||||| ||||| || |||||||| ||||||    
T  51005990 aaaaagaccctcaatttttaatacaaataacacatataacaaatagataagaat 51006043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 21093872 - 21093818
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  21093872 caaaaataccctcaattttaaatacaaataacacatgtaacaaatagacaagaat 21093818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 48525737 - 48525791
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  48525737 caaaaataccctcaattttcaatacaaataacacatgtaacaaatagataagaat 48525791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 21094270 - 21094216
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||| ||| ||||||    
T  21094270 caaaaataccctcaattttcaatacaaatagtacatgtaacaaacagataagaat 21094216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 21635172 - 21635226
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| |||||||||| |||||||| |||||||| ||||||    
T  21635172 caaaaatacccttaattttcaatacaaataacacatgtaacaaatagataagaat 21635226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 27725031 - 27724977
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| || ||||| |||||||| ||||||    
T  27725031 caaaaataccctcaatttttaatacaaataacatatgtaacaaatagataagaat 27724977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 39434743 - 39434797
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||| | ||||||    
T  39434743 caaaaataccctcaattttcaatacaaataacacatgtaacaaataaataagaat 39434797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 720 - 772
Target Start/End: Original strand, 23050288 - 23050340
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaaga 772  Q
    |||||||| |||||||||||||||||||||  ||||||| |||||||| ||||    
T  23050288 caaaaatatcctcaattttaaatacaaataatacatgtaacaaatagaaaaga 23050340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Original strand, 20034767 - 20034814
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  20034767 caaaaattccctcaattttcaatacaaataacacatgtaacaaataga 20034814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Complemental strand, 27241369 - 27241322
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  27241369 caaaaatgccctcaattttcaatacaaataacacatgtaacaaataga 27241322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 34729006 - 34729060
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| ||||||||||| |||| ||||| |||||||| |||||||| ||||||    
T  34729006 caaaaatgccctcaattttcaatataaataacacatgtaacaaatagataagaat 34729060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 37546655 - 37546601
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| || ||||||||||||||||||| ||||||||  ||||||| ||||||    
T  37546655 caaaaatgccatcaattttaaatacaaataacacatgtaaaaaatagataagaat 37546601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 765
Target Start/End: Complemental strand, 2275956 - 2275911
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaata 765  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||||||    
T  2275956 caaaaatgccctcaattttcaatacaaataacacatgtaacaaata 2275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Complemental strand, 6475031 - 6474978
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||| ||||||||||||||||||  ||||||||  ||||||| ||||||    
T  6475031 aaaaataccttcaattttaaatacaaatgacacatgtaataaatagataagaat 6474978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 12170348 - 12170401
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||| ||||||||||| ||| |||||| |||||||| |||||||| ||||||    
T  12170348 aaaaatgccctcaattttcaatgcaaataacacatgtaacaaatagataagaat 12170401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 765
Target Start/End: Original strand, 20045178 - 20045223
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaata 765  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||||||    
T  20045178 caaaaattccctcaattttcaatacaaataacacatgtaacaaata 20045223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 774
Target Start/End: Complemental strand, 25801686 - 25801645
Alignment:
Q  733 aattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||| |||||||| |||||||| ||||||    
T  25801686 aattttaaatacaaataacacatgtaacaaatagataagaat 25801645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 26005871 - 26005924
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  26005871 aaaaataccctcaattttcaatacaaataacacatgtaacaaatagacaagaat 26005924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 43317427 - 43317481
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  43317427 caaaaataccctcaattttcaatacaaataacacatgtaacaaatagataagaat 43317481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 5661906 - 5661960
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| |||||||||| |||||||| |||||||| ||||||    
T  5661906 caaaaatacccttaatttttaatacaaataacacatgtaacaaatagataagaat 5661960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 12214824 - 12214770
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| | |||||||| |||||||| |||||||| ||||||    
T  12214824 caaaaataccctcaattttcagtacaaataacacatgtaacaaatagataagaat 12214770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 13204625 - 13204572
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  13204625 caaaaataccctcaatttt-aatacaaataacacatgtaacaaatagataagaat 13204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 19438088 - 19438034
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| ||||||||  ||||||| ||||||    
T  19438088 caaaaataccctcaatttttaatacaaataacacatgtaataaatagataagaat 19438034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 27104135 - 27104081
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| ||| |||| ||||||    
T  27104135 caaaaataccctcaattttcaatacaaataacacatgtaacaattagataagaat 27104081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 34857814 - 34857868
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| |||||||||| |||||||| |||||||| ||||||    
T  34857814 caaaaatacccttaattttcaatacaaataacacatgtaacaaatagataagaat 34857868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 49358036 - 49358090
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||||||||||| || |||||||| |||||||| ||||||    
T  49358036 caaaaatacccttaattttaaatacaattaacacatgtaacaaatagataagaat 49358090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 29096854 - 29096907
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||| |||||||||| || ||||| |||||||| ||||||    
T  29096854 aaaaataccctcaattttcaatacaaataacatatgtaacaaatagataagaat 29096907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 50412741 - 50412794
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||| |||||||||| ||||||||  ||||||| ||||||    
T  50412741 aaaaataccctcaattttcaatacaaataacacatgtaataaatagataagaat 50412794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 721 - 772
Target Start/End: Original strand, 15742567 - 15742618
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaaga 772  Q
    |||||||||||||||||| |||||||||| |||||||| |||| ||| ||||    
T  15742567 aaaaataccctcaattttcaatacaaataacacatgtaacaaacagataaga 15742618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Original strand, 15849358 - 15849405
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  15849358 caaaaatgccctcaattttgaatacaaataacacatgtaacaaataga 15849405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Original strand, 34658384 - 34658431
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||||||||||||||| |||||||||| ||| |||| ||||||||    
T  34658384 caaaaataccctcaattttgaatacaaataacacttgtaacaaataga 34658431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 143706 - 143652
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||| ||||| ||||| || |||||||| ||||||    
T  143706 caaaaataccctcaattttcaatataaataacacatataacaaatagataagaat 143652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 4959162 - 4959108
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||| ||||| |||||||||| |||||||  |||||||| ||||||    
T  4959162 caaaaataccctctattttcaatacaaataacacatgttacaaatagataagaat 4959108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 6385220 - 6385274
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| |||||||| | |||||||| |||||||| ||||||    
T  6385220 caaaaatacccttaattttcaatacaaacaacacatgtaacaaatagataagaat 6385274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 20702172 - 20702226
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||| |||||||||||| |||| ||||| |||||||| |||||||| ||||||    
T  20702172 caaaaacaccctcaattttgaatataaataacacatgtaacaaatagataagaat 20702226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 42713358 - 42713304
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||  ||||| ||||||||||||| |||||||| |||||||| ||||||    
T  42713358 caaaaatacgttcaatcttaaatacaaataacacatgtaacaaatagataagaat 42713304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 43491287 - 43491341
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||| |||| |||||||||| ||||||||  ||||||| ||||||    
T  43491287 caaaaataccctcatttttcaatacaaataacacatgtaataaatagataagaat 43491341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 54162533 - 54162587
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| |||||||||| |||||||| ||| |||| ||||||    
T  54162533 caaaaatacccttaattttcaatacaaataacacatgtaacaactagataagaat 54162587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 774
Target Start/End: Complemental strand, 9162801 - 9162760
Alignment:
Q  733 aattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||| |||||||| |||||||| ||||||    
T  9162801 aattttaaatacaaataacacatgtaacaaatagataagaat 9162760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 765
Target Start/End: Complemental strand, 9162945 - 9162900
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaata 765  Q
    |||||||||||| ||||||||||||||||| |||||| | ||||||    
T  9162945 caaaaatacccttaattttaaatacaaataacacatgcaacaaata 9162900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 13265376 - 13265429
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||| ||||||||||| |||||||||| || ||||| |||||||| ||||||    
T  13265376 aaaaatgccctcaatttttaatacaaataacatatgtaacaaatagataagaat 13265429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 774
Target Start/End: Complemental strand, 20714131 - 20714086
Alignment:
Q  729 cctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||| |||||||||| | ||||||||||||||| ||||||    
T  20714131 cctcaattttcaatacaaataactcatgtagcaaatagataagaat 20714086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Complemental strand, 27551308 - 27551255
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||| ||||||||||| ||| |||||| |||||||| |||||||| ||||||    
T  27551308 aaaaatgccctcaattttcaatccaaataacacatgtaacaaatagataagaat 27551255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 37830721 - 37830774
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||| ||||||||||| |||| ||||| |||||||| |||||||| ||||||    
T  37830721 aaaaatgccctcaattttcaatataaataacacatgtaacaaatagataagaat 37830774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 16822997 - 16822943
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  16822997 caaaaataccctcaattttcaatacaaataacacatgtaacaaatagataagaat 16822943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 720 - 767
Target Start/End: Complemental strand, 36343499 - 36343452
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  36343499 caaaaataccctcaatttttaatacaaataacacatgtaacaaataga 36343452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 758
Target Start/End: Complemental strand, 19369075 - 19369037
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgta 758  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  19369075 caaaaataccctcaattttaaatacaaataacacatgta 19369037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 28773456 - 28773510
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||| | ||||||    
T  28773456 caaaaataccctcaattttcaatacaaataacacatgtaacaaataaataagaat 28773510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 721 - 767
Target Start/End: Complemental strand, 33100025 - 33099979
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||    
T  33100025 aaaaataccctcaattttgaatacaaataacacatgtaacaaataga 33099979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 774
Target Start/End: Original strand, 34966513 - 34966565
Alignment:
Q  722 aaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||| |||||||||| |||||||| |||||| | ||||||    
T  34966513 aaaataccctcaattttcaatacaaataacacatgtaacaaataaataagaat 34966565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Complemental strand, 21307386 - 21307339
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  21307386 caaaaatgccctcaattttcaatacaaataacacatgtaacaaataga 21307339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 731 - 774
Target Start/End: Original strand, 43922052 - 43922095
Alignment:
Q  731 tcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| ||||| || |||||||||||||||    
T  43922052 tcaattttaaatacaaataacacatataacaaatagacaagaat 43922095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 773
Target Start/End: Complemental strand, 2692299 - 2692245
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcaca-tgtagcaaatagacaagaa 773  Q
    ||||||||||||||||||| |||||||||| |||| |||| |||||||| |||||    
T  2692299 caaaaataccctcaattttcaatacaaataacacattgtaacaaatagataagaa 2692245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 721 - 767
Target Start/End: Complemental strand, 4856460 - 4856414
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||||    
T  4856460 aaaaatatcctcaattttaaatacaaataatacatgtaacaaataga 4856414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 9280059 - 9280113
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| |||||||||| |||||||| |||||| | ||||||    
T  9280059 caaaaatacccttaattttcaatacaaataacacatgtaacaaatatataagaat 9280113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 15898638 - 15898692
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| | |||||| |||||| | ||||||    
T  15898638 caaaaataccctcaatttttaatacaaataacccatgtaacaaataaataagaat 15898692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 758
Target Start/End: Complemental strand, 24023639 - 24023601
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgta 758  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  24023639 caaaaataccctcaattttaaatacaaacaacacatgta 24023601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 26527945 - 26527891
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||| ||||||||||||| |||||||| | |||||||| |||||||| ||||||    
T  26527945 caaaattaccctcaattttcaatacaaacaacacatgtaacaaatagataagaat 26527891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 28969902 - 28969848
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| |||||||||| ||||| || |||||||| ||||||    
T  28969902 caaaaataccctaaattttcaatacaaataacacatataacaaatagataagaat 28969848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Complemental strand, 9884992 - 9884939
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||| |||||| |||||||||| |||||||| ||||| || ||||||    
T  9884992 aaaaatacccttaattttcaatacaaataacacatgtaacaaattgataagaat 9884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 24007317 - 24007371
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  24007317 caaaaataccctcaattttgaatacaaataacacatgtaacaaatagataagaat 24007371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 774
Target Start/End: Complemental strand, 32904715 - 32904662
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||| |||||||||| |||||||| |||||| | ||||||    
T  32904715 aaaaataccctcaattttcaatacaaataacacatgtaacaaataaataagaat 32904662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 43369951 - 43370004
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||| |||||||||| ||||||||  ||||||| ||||||    
T  43369951 aaaaataccctcaattttcaatacaaataacacatgtaataaatagataagaat 43370004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Complemental strand, 15988531 - 15988484
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||||||||||||||| |||| ||||| |||||||| ||||||||    
T  15988531 caaaaataccctcaattttgaatataaataacacatgtaacaaataga 15988484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Complemental strand, 28868059 - 28868012
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  28868059 caaaaatgccctcaattttgaatacaaataacacatgtaacaaataga 28868012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 16539110 - 16539164
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| || ||||||| |||||||| ||||| || ||||||    
T  16539110 caaaaataccctcaattttcaacacaaataacacatgtaacaaattgataagaat 16539164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 17065180 - 17065126
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||| |||  ||||||| ||||||    
T  17065180 caaaaataccctcaattttcaatacaaataacacacgtaataaatagataagaat 17065126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 38938795 - 38938741
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| ||||||||||||||| | |||||||| |||||| | ||||||    
T  38938795 caaaaatacccttaattttaaatacaaagaacacatgtaacaaataaataagaat 38938741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 749
Target Start/End: Original strand, 19126424 - 19126453
Alignment:
Q  720 caaaaataccctcaattttaaatacaaata 749  Q
    ||||||||||||||||||||||||||||||    
T  19126424 caaaaataccctcaattttaaatacaaata 19126453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 19650521 - 19650574
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||| |||||||||| |||||||  |||| ||| ||||||    
T  19650521 aaaaataccctcaattttcaatacaaataacacatgttacaaaaagataagaat 19650574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 766
Target Start/End: Original strand, 28002508 - 28002553
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatag 766  Q
    |||||| || ||| |||||||||||||||||||||||| |||||||    
T  28002508 aaaaatgccatcagttttaaatacaaatagcacatgtaacaaatag 28002553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 37706286 - 37706232
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  37706286 caaaaataccctcaattttcaatacaaataacacatgtaacaaatagataagaat 37706232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 4972586 - 4972532
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||| || ||||||||||||||||| |||||||| |||||||| ||||||    
T  4972586 caaaaatactcttaattttaaatacaaataacacatgtaacaaatagataagaat 4972532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 16424293 - 16424347
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||| | ||||||    
T  16424293 caaaaatgccctcaattttaaatacaaataacacatgtaacaaatatataagaat 16424347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 34969601 - 34969547
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||| ||||| |||||||| |||||||| ||||||    
T  34969601 caaaaataccctcaattttcaatataaataacacatgtaacaaatagataagaat 34969547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 721 - 767
Target Start/End: Original strand, 40402444 - 40402490
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    |||||||| |||||||||||||||||||| |||||||| ||||||||    
T  40402444 aaaaatactctcaattttaaatacaaataacacatgtaacaaataga 40402490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 48995698 - 48995644
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||| |||||||| ||| |||||| ||||||||||||||||| ||||||    
T  48995698 caaaaataccatcaattttcaatgcaaataacacatgtagcaaatagataagaat 48995644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 774
Target Start/End: Complemental strand, 22094219 - 22094166
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||| |||||| |||||||||| |||||||| |||||||| ||||||    
T  22094219 aaaaatacccttaattttcaatacaaataacacatgtaacaaatagataagaat 22094166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 25172314 - 25172367
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||| ||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  25172314 aaaaatgccctcaattttgaatacaaataacacatgtaacaaatagataagaat 25172367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 720 - 765
Target Start/End: Complemental strand, 27307932 - 27307887
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaata 765  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||    
T  27307932 caaaaataccctcaattttcaatacaaataacacatgtaacaaata 27307887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 8007255 - 8007310
Alignment:
Q  720 caaaaataccctcaattttaaatac-aaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| ||||| ||||| |||||||| |||||||| ||||||    
T  8007255 caaaaataccctcaattttcaatacaaaataacacatgtaacaaatagataagaat 8007310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Original strand, 8096019 - 8096066
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    |||||||||||| |||||| |||||||||| |||||||| ||||||||    
T  8096019 caaaaataccctaaattttcaatacaaataacacatgtaacaaataga 8096066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 763
Target Start/End: Original strand, 50231416 - 50231459
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaa 763  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||    
T  50231416 caaaaatacccttaattttaaatacaaataacacatgtaacaaa 50231459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 773568 - 773622
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||| ||| ||||| || |||||||| ||||||    
T  773568 caaaaataccctcaattttcaatacagataacacatctaacaaatagataagaat 773622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 721 - 767
Target Start/End: Original strand, 4967330 - 4967376
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    |||||||| || ||||||||||||||||| |||||||| ||||||||    
T  4967330 aaaaatactcttaattttaaatacaaataacacatgtaacaaataga 4967376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 10172179 - 10172233
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| ||||||||||| |||| ||||| |||||||| |||||||| ||||||    
T  10172179 caaaaatgccctcaatttttaatagaaataacacatgtaacaaatagataagaat 10172233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 766
Target Start/End: Original strand, 12264791 - 12264837
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatag 766  Q
    ||||||| ||||||||||| |||||||||| |||||||| |||||||    
T  12264791 caaaaatgccctcaattttgaatacaaataacacatgtaacaaatag 12264837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 17605630 - 17605576
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| |||| ||||||||||||||||| ||||||||  ||||||| ||||||    
T  17605630 caaaaatgcccttaattttaaatacaaataccacatgtaataaatagataagaat 17605576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 21335973 - 21336027
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| ||||||||||  ||||||| |||||| | ||||||    
T  21335973 caaaaataccctcaattttcaatacaaataatacatgtaacaaatatataagaat 21336027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 724 - 774
Target Start/End: Complemental strand, 24162697 - 24162647
Alignment:
Q  724 aataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||| ||||||||||||||||| |||||||| |||||| | ||||||    
T  24162697 aatacccttaattttaaatacaaataacacatgtaacaaatatataagaat 24162647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 728 - 774
Target Start/End: Original strand, 33193699 - 33193745
Alignment:
Q  728 ccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||||| | |||||||| |||||||| ||||||    
T  33193699 ccctcaattttaaatacaaacaacacatgtaacaaatagataagaat 33193745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 724 - 774
Target Start/End: Original strand, 49162506 - 49162556
Alignment:
Q  724 aataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||| ||| |||||| |||||||| |||||||| ||||||    
T  49162506 aataccctcaattttcaatgcaaataacacatgtaacaaatagataagaat 49162556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 725 - 774
Target Start/End: Complemental strand, 1570491 - 1570443
Alignment:
Q  725 ataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||||| |||| |||||||| |||||||| ||||||    
T  1570491 ataccctcaattttaaatac-aataacacatgtaacaaatagataagaat 1570443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 2665991 - 2666044
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||| |||||| || ||||||| |||||||| |||||||| ||||||    
T  2665991 aaaaatacccttaattttcaaaacaaataacacatgtaacaaatagataagaat 2666044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Complemental strand, 10844516 - 10844463
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||| || ||||||||||||||||||| |||||||| |||||| | ||||||    
T  10844516 aaaaatgccttcaattttaaatacaaataacacatgtaacaaataaataagaat 10844463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 765
Target Start/End: Original strand, 11408803 - 11408848
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaata 765  Q
    ||||||||||||||||||| |||| ||||| |||||||| ||||||    
T  11408803 caaaaataccctcaattttcaatagaaataacacatgtaacaaata 11408848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 14245813 - 14245866
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||  |||||||||||||||| || ||||| |||||||| ||||||    
T  14245813 aaaaatacccttgattttaaatacaaataacatatgtaacaaatagataagaat 14245866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000005; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 33312780 - 33312833
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  33312780 aaaaataccctcaatttttaatacaaataacacatgtaacaaatagataagaat 33312833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 720 - 767
Target Start/End: Complemental strand, 24005346 - 24005299
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  24005346 caaaaatatcctcaattttaaatacaaataacacatgtaacaaataga 24005299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 3357973 - 3357919
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| |||||||||| |||||||| |||||||| ||||||    
T  3357973 caaaaatacccttaattttcaatacaaataacacatgtaacaaatagataagaat 3357919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 7061752 - 7061806
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||  |||||||||||||||| |||||||| |||||||| ||||||    
T  7061752 caaaaatacccttgattttaaatacaaataacacatgtaacaaatagataagaat 7061806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 721 - 767
Target Start/End: Complemental strand, 8063264 - 8063218
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||    
T  8063264 aaaaataccctcaattttcaatacaaataacacatgtaacaaataga 8063218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 13596313 - 13596259
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||| ||| ||||||||||||||||| |||||||| |||||||| ||||||    
T  13596313 caaaaatagccttaattttaaatacaaataacacatgtaacaaatagataagaat 13596259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 19901638 - 19901584
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| ||||||||||| ||||| |||||||| |||||||| ||||||    
T  19901638 caaaaatacccttaattttaaataaaaataacacatgtaacaaatagataagaat 19901584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 21956550 - 21956603
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||    
T  21956550 caaaaatacccttaattttaaatacaaata-cacatgtaacaaatagataagaat 21956603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 24004835 - 24004782
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||||| ||||||    
T  24004835 caaaaataccctcaattttcaatacaaatagcaaatgta-caaatagataagaat 24004782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 27649139 - 27649193
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||| ||||||||| ||| ||||||||||||||||||| |||||||| ||||||    
T  27649139 caaaattaccctcaactttcaatacaaatagcacatgtaacaaatagataagaat 27649193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 35156082 - 35156136
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| ||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  35156082 caaaaatgccctcaatttttaatacaaataacacatgtaacaaatagataagaat 35156136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Original strand, 629424 - 629471
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||||||||||||||||| ||| |||||  |||||||||||||||||    
T  629424 caaaaataccctcaattttcaatgcaaatcacacatgtagcaaataga 629471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 38702485 - 38702431
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| ||||||||||| |||||||||| ||| |||| |||||||| ||||||    
T  38702485 caaaaatgccctcaattttcaatacaaataacacgtgtaacaaatagataagaat 38702431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 40499603 - 40499549
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| ||||||||||| ||||||||||  ||||||| |||||||| ||||||    
T  40499603 caaaaatgccctcaattttgaatacaaataatacatgtaacaaatagataagaat 40499549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 774
Target Start/End: Original strand, 309750 - 309791
Alignment:
Q  733 aattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||| |||||||| |||||||| ||||||    
T  309750 aattttaaatacaaataacacatgtaacaaatagataagaat 309791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 774
Target Start/End: Original strand, 13594417 - 13594458
Alignment:
Q  733 aattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||| |||||||| |||||||| ||||||    
T  13594417 aattttaaatacaaataacacatgtaacaaatagataagaat 13594458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 758
Target Start/End: Original strand, 24896341 - 24896378
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgta 758  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  24896341 aaaaataccctcaattttcaatacaaataacacatgta 24896378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Complemental strand, 33676987 - 33676934
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||| ||||||||||| |||||||||| |||||||| |||||| | ||||||    
T  33676987 aaaaatgccctcaattttcaatacaaataacacatgtaacaaatatataagaat 33676934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 21363 - 21309
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||| ||||||||||| |||||||||| |||||||| |||||||| ||||||    
T  21363 caaaaatgccctcaattttcaatacaaataacacatgtaacaaatagataagaat 21309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000003; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 2485690 - 2485744
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| ||| |||| ||||||    
T  2485690 caaaaataccctcaattttcaatacaaataacacatgtaacaattagataagaat 2485744  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 11323145 - 11323199
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||| | ||||||    
T  11323145 caaaaataccctcaattttcaatacaaataacacatgtaacaaatacataagaat 11323199  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 20730161 - 20730214
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||| |||||| |||||||||| |||||||| |||||||| ||||||    
T  20730161 aaaaatacccttaattttcaatacaaataacacatgtaacaaatagataagaat 20730214  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 927757 - 927811
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||| || |||||||||||||| || |||||||| |||||||| ||||||    
T  927757 caaaaatactcttaattttaaatacaagtaacacatgtaacaaatagataagaat 927811  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Original strand, 14894667 - 14894721
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||| |||||||| | |||||||| ||| |||||||||||    
T  14894667 caaaaatacccttaattttcaatacaaacaacacatgtaacaattagacaagaat 14894721  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 758
Target Start/End: Complemental strand, 14910111 - 14910073
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgta 758  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  14910111 caaaaataccctcaattttcaatacaaataacacatgta 14910073  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 720 - 774
Target Start/End: Complemental strand, 35219480 - 35219426
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    |||||||||||| |||||||||||||| || ||||| || |||||||| ||||||    
T  35219480 caaaaatacccttaattttaaatacaagtaacacatctaacaaatagataagaat 35219426  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 720 - 767
Target Start/End: Complemental strand, 47463 - 47416
Alignment:
Q  720 caaaaataccctcaattttaaatacaaatagcacatgtagcaaataga 767  Q
    ||||| ||||||||||||| |||||||||| |||||||| ||||||||    
T  47463 caaaactaccctcaattttcaatacaaataacacatgtatcaaataga 47416  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 721 - 774
Target Start/End: Original strand, 48348 - 48401
Alignment:
Q  721 aaaaataccctcaattttaaatacaaatagcacatgtagcaaatagacaagaat 774  Q
    ||||||||||| ||||||||||||||||| || |||||  ||||||| ||||||    
T  48348 aaaaatacccttaattttaaatacaaataacaaatgtaataaatagataagaat 48401  T

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