View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11880_high_31 (Length: 204)

Name: NF11880_high_31
Description: NF11880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11880_high_31
NF11880_high_31
[»] chr6 (37 HSPs)
chr6 (83-188)||(16578996-16579101)
chr6 (83-188)||(16616279-16616384)
chr6 (83-188)||(16554454-16554559)
chr6 (83-188)||(16631010-16631115)
chr6 (91-188)||(27647476-27647573)
chr6 (83-185)||(30125018-30125120)
chr6 (81-186)||(25420795-25420900)
chr6 (83-186)||(6136444-6136547)
chr6 (83-188)||(411685-411791)
chr6 (83-188)||(6097880-6097986)
chr6 (83-185)||(11857465-11857567)
chr6 (83-175)||(3073250-3073343)
chr6 (83-185)||(14741926-14742028)
chr6 (83-160)||(22010189-22010266)
chr6 (83-186)||(33342585-33342688)
chr6 (83-186)||(34166666-34166769)
chr6 (96-188)||(2171998-2172090)
chr6 (83-167)||(6026834-6026918)
chr6 (95-188)||(5674242-5674335)
chr6 (83-140)||(16652716-16652773)
chr6 (91-186)||(13150857-13150952)
chr6 (83-186)||(34151828-34151931)
chr6 (83-186)||(34164444-34164547)
chr6 (82-188)||(22709539-22709646)
chr6 (83-188)||(26253589-26253695)
chr6 (81-140)||(5266596-5266655)
chr6 (83-158)||(6439008-6439083)
chr6 (82-140)||(14737084-14737142)
chr6 (95-159)||(23896880-23896944)
chr6 (90-138)||(28155097-28155145)
chr6 (90-157)||(5343990-5344057)
chr6 (77-140)||(5571743-5571806)
chr6 (145-188)||(16652759-16652802)
chr6 (90-140)||(5016976-5017026)
chr6 (90-140)||(31085953-31086003)
chr6 (90-135)||(21272469-21272514)
chr6 (145-185)||(5266570-5266610)
[»] chr5 (42 HSPs)
chr5 (83-188)||(22536747-22536852)
chr5 (83-188)||(29752284-29752390)
chr5 (83-188)||(10592844-10592948)
chr5 (82-188)||(29719964-29720071)
chr5 (83-188)||(9789703-9789809)
chr5 (83-188)||(29751618-29751724)
chr5 (83-185)||(30631846-30631948)
chr5 (83-177)||(29722152-29722247)
chr5 (83-188)||(18442127-18442233)
chr5 (83-188)||(26177466-26177572)
chr5 (83-185)||(27450307-27450409)
chr5 (83-188)||(40379678-40379783)
chr5 (83-177)||(1456638-1456732)
chr5 (83-188)||(16546216-16546321)
chr5 (83-185)||(27445464-27445566)
chr5 (83-185)||(29402550-29402652)
chr5 (83-188)||(40381889-40381994)
chr5 (82-185)||(43599215-43599319)
chr5 (82-185)||(43604707-43604811)
chr5 (82-185)||(43610199-43610303)
chr5 (83-178)||(25077706-25077800)
chr5 (83-178)||(25135675-25135769)
chr5 (96-188)||(24136378-24136470)
chr5 (83-158)||(16543994-16544069)
chr5 (83-188)||(16407641-16407747)
chr5 (95-188)||(36931856-36931949)
chr5 (83-188)||(15465019-15465125)
chr5 (95-188)||(26170370-26170463)
chr5 (83-185)||(15045178-15045279)
chr5 (83-188)||(16409077-16409183)
chr5 (82-188)||(9352806-9352913)
chr5 (83-140)||(31180773-31180830)
chr5 (83-140)||(43592797-43592854)
chr5 (90-140)||(14520796-14520846)
chr5 (95-157)||(37556137-37556199)
chr5 (95-140)||(37560959-37561004)
chr5 (90-157)||(28807083-28807150)
chr5 (83-132)||(35388196-35388246)
chr5 (83-126)||(43625605-43625648)
chr5 (125-159)||(5057451-5057485)
chr5 (90-140)||(12083658-12083708)
chr5 (95-140)||(11916457-11916502)
[»] chr1 (29 HSPs)
chr1 (83-188)||(9036003-9036108)
chr1 (83-188)||(20622715-20622821)
chr1 (83-177)||(21053540-21053634)
chr1 (83-188)||(40281958-40282064)
chr1 (83-186)||(44203218-44203321)
chr1 (83-188)||(24202251-24202357)
chr1 (83-175)||(9986785-9986878)
chr1 (82-188)||(19365767-19365874)
chr1 (83-188)||(51764990-51765096)
chr1 (83-159)||(39446006-39446082)
chr1 (83-158)||(44023377-44023452)
chr1 (83-184)||(13604095-13604197)
chr1 (83-188)||(19360912-19361018)
chr1 (95-185)||(41391084-41391173)
chr1 (83-150)||(1054514-1054581)
chr1 (82-140)||(24793665-24793723)
chr1 (90-159)||(25439406-25439475)
chr1 (90-159)||(25444599-25444668)
chr1 (90-140)||(13598967-13599017)
chr1 (95-140)||(21536125-21536170)
chr1 (95-140)||(41398764-41398809)
chr1 (96-140)||(37070334-37070378)
chr1 (90-159)||(26644381-26644450)
chr1 (125-159)||(13549711-13549745)
chr1 (125-159)||(19754007-19754041)
chr1 (95-140)||(3282273-3282318)
chr1 (83-140)||(13659840-13659897)
chr1 (99-140)||(16124197-16124238)
chr1 (145-185)||(24793709-24793749)
[»] chr3 (63 HSPs)
chr3 (80-188)||(54634707-54634815)
chr3 (83-188)||(6716085-6716190)
chr3 (83-185)||(40372256-40372358)
chr3 (83-186)||(3617034-3617137)
chr3 (83-185)||(22172662-22172764)
chr3 (83-182)||(8477903-8478002)
chr3 (82-186)||(4601225-4601329)
chr3 (83-186)||(4599004-4599107)
chr3 (83-167)||(25637013-25637097)
chr3 (83-188)||(800685-800791)
chr3 (83-185)||(7167780-7167882)
chr3 (83-185)||(28501152-28501254)
chr3 (83-182)||(28503319-28503418)
chr3 (83-188)||(7782606-7782712)
chr3 (82-186)||(10208777-10208881)
chr3 (83-172)||(18656940-18657029)
chr3 (83-186)||(10055805-10055908)
chr3 (83-186)||(10058027-10058130)
chr3 (83-186)||(10060249-10060352)
chr3 (83-186)||(10062471-10062574)
chr3 (83-186)||(10064693-10064796)
chr3 (83-186)||(10066915-10067018)
chr3 (83-188)||(1306498-1306604)
chr3 (83-188)||(23198424-23198530)
chr3 (83-188)||(23200623-23200729)
chr3 (83-188)||(26928080-26928186)
chr3 (83-140)||(6718288-6718345)
chr3 (83-140)||(45282585-45282642)
chr3 (83-159)||(10210978-10211054)
chr3 (82-188)||(33386136-33386243)
chr3 (83-188)||(37408036-37408142)
chr3 (99-184)||(27352097-27352182)
chr3 (83-188)||(37726193-37726299)
chr3 (82-188)||(27453475-27453582)
chr3 (82-140)||(8738541-8738599)
chr3 (82-140)||(9090779-9090837)
chr3 (90-159)||(36029640-36029709)
chr3 (83-142)||(32143868-32143928)
chr3 (92-140)||(40734084-40734132)
chr3 (95-142)||(27974446-27974493)
chr3 (95-157)||(2672431-2672493)
chr3 (95-157)||(2676587-2676649)
chr3 (90-140)||(16264896-16264946)
chr3 (90-140)||(21711768-21711818)
chr3 (90-140)||(30709266-30709316)
chr3 (95-140)||(27027273-27027318)
chr3 (129-185)||(2671111-2671167)
chr3 (152-188)||(6718338-6718374)
chr3 (152-188)||(45282635-45282671)
chr3 (79-141)||(40845220-40845283)
chr3 (96-142)||(27985971-27986017)
chr3 (90-140)||(39032025-39032075)
chr3 (88-157)||(32475997-32476066)
chr3 (88-157)||(32480855-32480924)
chr3 (92-140)||(40735015-40735063)
chr3 (90-133)||(1730916-1730959)
chr3 (125-159)||(4569353-4569387)
chr3 (90-140)||(27038608-27038658)
chr3 (90-140)||(35926057-35926106)
chr3 (90-140)||(40592252-40592302)
chr3 (90-140)||(48438782-48438832)
chr3 (125-159)||(55302696-55302730)
chr3 (83-140)||(16498637-16498694)
[»] chr8 (29 HSPs)
chr8 (83-188)||(3439088-3439193)
chr8 (83-185)||(33037287-33037389)
chr8 (83-185)||(36979912-36980014)
chr8 (80-185)||(30656180-30656285)
chr8 (83-185)||(4759534-4759636)
chr8 (83-185)||(10683739-10683841)
chr8 (83-185)||(18852627-18852729)
chr8 (90-185)||(6311833-6311928)
chr8 (83-185)||(18870021-18870123)
chr8 (83-188)||(31042908-31043014)
chr8 (81-188)||(2627316-2627424)
chr8 (83-186)||(42575806-42575909)
chr8 (83-185)||(25327664-25327766)
chr8 (82-186)||(15290142-15290246)
chr8 (82-186)||(15470511-15470615)
chr8 (83-185)||(7289427-7289530)
chr8 (83-188)||(26288411-26288517)
chr8 (83-188)||(26301668-26301774)
chr8 (83-188)||(26313662-26313768)
chr8 (96-188)||(1261428-1261520)
chr8 (83-158)||(39784325-39784400)
chr8 (95-188)||(7412846-7412939)
chr8 (83-140)||(25689561-25689618)
chr8 (83-140)||(10688618-10688675)
chr8 (90-140)||(5701959-5702009)
chr8 (125-159)||(11383406-11383440)
chr8 (95-140)||(4456575-4456620)
chr8 (145-188)||(25689604-25689646)
chr8 (96-140)||(23799105-23799149)
[»] chr7 (37 HSPs)
chr7 (83-182)||(20343500-20343599)
chr7 (80-188)||(24789423-24789532)
chr7 (83-185)||(21640321-21640423)
chr7 (83-186)||(6592818-6592921)
chr7 (83-186)||(32060785-32060888)
chr7 (82-185)||(20357027-20357130)
chr7 (83-186)||(6595034-6595137)
chr7 (82-185)||(2058503-2058605)
chr7 (83-161)||(1562509-1562587)
chr7 (95-188)||(43504615-43504708)
chr7 (83-188)||(18392675-18392780)
chr7 (83-183)||(12406757-12406857)
chr7 (83-186)||(18414171-18414275)
chr7 (81-160)||(4873644-4873723)
chr7 (82-188)||(39730932-39731039)
chr7 (83-160)||(31109070-31109147)
chr7 (83-185)||(12397390-12397492)
chr7 (83-188)||(18409293-18409399)
chr7 (83-188)||(48408398-48408504)
chr7 (95-188)||(21646537-21646630)
chr7 (95-160)||(24023831-24023896)
chr7 (95-156)||(1532897-1532958)
chr7 (95-159)||(47264190-47264254)
chr7 (95-188)||(2479854-2479947)
chr7 (83-139)||(18390506-18390562)
chr7 (95-159)||(44847632-44847696)
chr7 (90-189)||(21983760-21983859)
chr7 (95-157)||(21811751-21811813)
chr7 (95-188)||(25767440-25767527)
chr7 (95-159)||(21989454-21989518)
chr7 (90-140)||(79955-80005)
chr7 (126-188)||(1532947-1533009)
chr7 (125-159)||(14070348-14070382)
chr7 (125-159)||(14380376-14380410)
chr7 (90-157)||(24260828-24260895)
chr7 (125-159)||(30814271-30814305)
chr7 (96-141)||(49092237-49092282)
[»] scaffold0565 (1 HSPs)
scaffold0565 (81-186)||(3082-3187)
[»] chr4 (45 HSPs)
chr4 (83-185)||(24742475-24742577)
chr4 (83-186)||(8392982-8393085)
chr4 (83-186)||(8395191-8395294)
chr4 (83-188)||(31495796-31495902)
chr4 (81-185)||(51520948-51521052)
chr4 (83-186)||(7122267-7122370)
chr4 (83-186)||(7124489-7124592)
chr4 (83-185)||(9223899-9224001)
chr4 (83-185)||(56141511-56141613)
chr4 (83-185)||(9228686-9228788)
chr4 (83-188)||(13992773-13992879)
chr4 (83-160)||(3814528-3814605)
chr4 (83-172)||(5733158-5733247)
chr4 (83-186)||(5135649-5135752)
chr4 (83-186)||(5137875-5137978)
chr4 (80-188)||(28467974-28468083)
chr4 (83-158)||(18856234-18856309)
chr4 (83-158)||(18860446-18860521)
chr4 (18-82)||(7716051-7716115)
chr4 (83-188)||(31985127-31985233)
chr4 (90-158)||(45347324-45347392)
chr4 (90-189)||(5148195-5148294)
chr4 (90-143)||(8689044-8689097)
chr4 (95-140)||(29761182-29761227)
chr4 (90-142)||(5143807-5143859)
chr4 (27-82)||(7126614-7126669)
chr4 (27-82)||(7503061-7503116)
chr4 (27-82)||(7719880-7719935)
chr4 (24-82)||(7522526-7522584)
chr4 (90-140)||(16628353-16628403)
chr4 (123-185)||(18712295-18712357)
chr4 (90-140)||(38151918-38151968)
chr4 (90-139)||(3778116-3778165)
chr4 (37-82)||(10477662-10477707)
chr4 (90-141)||(5268699-5268750)
chr4 (90-140)||(6742896-6742946)
chr4 (90-140)||(10047932-10047982)
chr4 (90-140)||(16622774-16622824)
chr4 (27-82)||(7484472-7484527)
chr4 (27-74)||(7530597-7530644)
chr4 (90-140)||(54867745-54867795)
chr4 (27-72)||(7496871-7496916)
chr4 (95-140)||(36314716-36314761)
chr4 (95-140)||(36328925-36328970)
chr4 (145-185)||(29761156-29761196)
[»] chr2 (25 HSPs)
chr2 (83-186)||(12647864-12647967)
chr2 (83-185)||(9295862-9295964)
chr2 (83-185)||(14292023-14292125)
chr2 (83-185)||(11098387-11098489)
chr2 (83-188)||(4484817-4484923)
chr2 (83-188)||(6266274-6266380)
chr2 (83-188)||(32289148-32289254)
chr2 (83-160)||(39811477-39811554)
chr2 (83-160)||(44310471-44310548)
chr2 (83-188)||(30832921-30833027)
chr2 (95-188)||(25410160-25410253)
chr2 (83-159)||(32247276-32247352)
chr2 (83-188)||(3492271-3492377)
chr2 (83-188)||(40739351-40739457)
chr2 (90-140)||(8389631-8389681)
chr2 (90-142)||(36757425-36757477)
chr2 (95-142)||(28258682-28258729)
chr2 (90-140)||(10706733-10706783)
chr2 (90-140)||(21630511-21630561)
chr2 (90-140)||(33528105-33528155)
chr2 (90-140)||(39483443-39483493)
chr2 (90-134)||(20522794-20522838)
chr2 (125-159)||(7450797-7450831)
chr2 (125-159)||(17863812-17863846)
chr2 (90-140)||(23077952-23078002)
[»] scaffold0674 (1 HSPs)
scaffold0674 (83-186)||(4207-4310)
[»] scaffold0491 (2 HSPs)
scaffold0491 (83-188)||(9202-9308)
scaffold0491 (83-188)||(11647-11753)
[»] scaffold0188 (1 HSPs)
scaffold0188 (83-188)||(17431-17537)
[»] scaffold0137 (1 HSPs)
scaffold0137 (83-188)||(5859-5964)
[»] scaffold0286 (1 HSPs)
scaffold0286 (96-185)||(21953-22042)
[»] scaffold0135 (1 HSPs)
scaffold0135 (83-160)||(34554-34631)
[»] scaffold1455 (1 HSPs)
scaffold1455 (82-158)||(1708-1784)
[»] scaffold0140 (1 HSPs)
scaffold0140 (82-188)||(7910-8017)
[»] scaffold0355 (1 HSPs)
scaffold0355 (83-177)||(3337-3431)
[»] scaffold0006 (4 HSPs)
scaffold0006 (83-184)||(132752-132854)
scaffold0006 (90-140)||(6252-6302)
scaffold0006 (90-140)||(3060-3110)
scaffold0006 (83-140)||(149601-149658)
[»] scaffold0464 (1 HSPs)
scaffold0464 (83-158)||(870-945)
[»] scaffold0665 (1 HSPs)
scaffold0665 (82-140)||(8216-8274)
[»] scaffold1519 (1 HSPs)
scaffold1519 (123-188)||(523-588)
[»] scaffold0510 (1 HSPs)
scaffold0510 (95-159)||(1096-1160)
[»] scaffold0087 (2 HSPs)
scaffold0087 (95-159)||(43447-43511)
scaffold0087 (90-142)||(36332-36384)
[»] scaffold0098 (1 HSPs)
scaffold0098 (83-142)||(45744-45804)
[»] scaffold0466 (1 HSPs)
scaffold0466 (125-159)||(6750-6784)
[»] scaffold0014 (1 HSPs)
scaffold0014 (125-159)||(81015-81049)


Alignment Details
Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 16579101 - 16578996
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  16579101 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 16579002  T
Q  183 agggtg 188  Q
    ||||||    
T  16579001 agggtg 16578996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 16616279 - 16616384
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  16616279 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 16616378  T
Q  183 agggtg 188  Q
    ||||||    
T  16616379 agggtg 16616384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 16554454 - 16554559
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| |    
T  16554454 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggttac 16554553  T
Q  183 agggtg 188  Q
    ||||||    
T  16554554 agggtg 16554559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 16631010 - 16631115
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| |    
T  16631010 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggttac 16631109  T
Q  183 agggtg 188  Q
    ||||||    
T  16631110 agggtg 16631115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 27647476 - 27647573
Alignment:
Q  91 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  27647476 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggtg 27647573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 30125018 - 30125120
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  30125018 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 30125117  T
Q  183 agg 185  Q
    |||    
T  30125118 agg 30125120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 25420795 - 25420900
Alignment:
Q  81 agtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggt 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||||| || |||||||||||| |||    
T  25420795 agtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttc-ggatgccgtgagctagggt 25420893  T
Q  180 tgcaggg 186  Q
    |||||||    
T  25420894 tgcaggg 25420900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 6136547 - 6136444
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||| || |||||||||||| |||||    
T  6136547 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttc-ggatgccgtgagctagggttg 6136449  T
Q  182 caggg 186  Q
    |||||    
T  6136448 caggg 6136444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 411685 - 411791
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||| ||| |||||| |||||||||||||||  ||    
T  411685 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtctg 411784  T
Q  182 cagggtg 188  Q
    |||||||    
T  411785 cagggtg 411791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 6097986 - 6097880
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||| |||||||||| | ||||||||||| | |||    
T  6097986 tgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 6097887  T
Q  182 cagggtg 188  Q
    |||||||    
T  6097886 cagggtg 6097880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 11857567 - 11857465
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  |  |||||||||||| ||||    
T  11857567 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 11857468  T
Q  183 agg 185  Q
    |||    
T  11857467 agg 11857465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 3073343 - 3073250
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagct 175  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||| | |||||||||||    
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct 3073250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 14741926 - 14742028
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  |  | |||||||||| ||||    
T  14741926 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagctagtttgc 14742025  T
Q  183 agg 185  Q
    |||    
T  14742026 agg 14742028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 22010189 - 22010266
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc 160  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  22010189 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 22010266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 33342688 - 33342585
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| | | ||||||| || |||||||||||| |||||    
T  33342688 tgttgagattgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttc-ggatgccgtgagctagggttg 33342590  T
Q  182 caggg 186  Q
    |||||    
T  33342589 caggg 33342585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 34166666 - 34166769
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || |||||    
T  34166666 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 34166764  T
Q  182 caggg 186  Q
    |||||    
T  34166765 caggg 34166769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 2172090 - 2171998
Alignment:
Q  96 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||||||||||||||||||||||| ||||||| |||| || |||||||||||| |||||||||| | ||||||||||| | ||||||||||    
T  2172090 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtg 2171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 6026834 - 6026918
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgc 167  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  ||||| ||| |||||||||| |||||    
T  6026834 tgttgagattgtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttcgaggtgc 6026918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 5674242 - 5674335
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    ||||||||||||||||||||||||||| |||||||||||| || |||||||||||| || ||||| | | ||||||||||| | ||||||||||    
T  5674242 cttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttgcagggtg 5674335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 16652716 - 16652773
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16652716 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 13150857 - 13150952
Alignment:
Q  91 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttgcaggg 186  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || ||||||||||    
T  13150857 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttgcaggg 13150952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 34151828 - 34151931
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||| | ||||||| || ||||||||| || |||||    
T  34151828 tgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttc-ggatgccgtgagttagggttg 34151926  T
Q  182 caggg 186  Q
    |||||    
T  34151927 caggg 34151931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 34164444 - 34164547
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||| | ||||||| || ||||||||| || |||||    
T  34164444 tgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttc-ggatgccgtgagttagggttg 34164542  T
Q  182 caggg 186  Q
    |||||    
T  34164543 caggg 34164547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 22709646 - 22709539
Alignment:
Q  82 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggtt 180  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||| |||||||| ||||||| |||| |||||||| | | |||| |||||| | ||    
T  22709646 gtgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagctggttt 22709547  T
Q  181 gcagggtg 188  Q
    ||||||||    
T  22709546 gcagggtg 22709539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 26253589 - 26253695
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| || ||||| | | | ||||||| ||| | |    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattttgtgataccgtgagatagttag 26253688  T
Q  182 cagggtg 188  Q
    |||||||    
T  26253689 cagggtg 26253695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 5266655 - 5266596
Alignment:
Q  81 agtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  5266655 agtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 6439083 - 6439008
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatt 158  Q
    |||||| |||| |||||||||| |||||||||||||||  ||||||||||||||||||||| |||||| |||||||    
T  6439083 tgttgaaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgatt 6439008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 14737084 - 14737142
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14737084 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 23896944 - 23896880
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||| || ||||||||  ||||||||||||||||||||||||||| ||||||||    
T  23896944 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 23896880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 28155097 - 28155145
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgat 138  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  28155097 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 5344057 - 5343990
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgat 157  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||| |||||||| | ||||||| ||||||    
T  5344057 attggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 5571743 - 5571806
Alignment:
Q  77 tcaaagtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||  ||||||||||||||||| | ||| |||| || ||||||||||||||||||    
T  5571743 tcaaagtgttgaatttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacgattt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 16652759 - 16652802
Alignment:
Q  145 atcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||| |||||||||||||||||||||||||||||| ||||||    
T  16652759 atcgtgacacgatttcggggtgccgtgagctaggttgtagggtg 16652802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 5016976 - 5017026
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  5016976 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 31085953 - 31086003
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| | ||||||||| ||||||||||||||||||    
T  31085953 attggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 21272469 - 21272514
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 135  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||    
T  21272469 attggcttcaaatttgtgttttggaggaacagggaaatcgtgacac 21272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 5266610 - 5266570
Alignment:
Q  145 atcgtggcacgatttcggggtgccgtgagctaggttgcagg 185  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagtttgcagg 5266570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 22536852 - 22536747
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  22536852 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 22536753  T
Q  183 agggtg 188  Q
    ||||||    
T  22536752 agggtg 22536747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 29752390 - 29752284
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||||||||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagctaggttg 29752291  T
Q  182 cagggtg 188  Q
    |||||||    
T  29752290 cagggtg 29752284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 10592844 - 10592948
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||||| ||||||||    
T  10592844 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacga-ttccgggtgccgtgagataggttgc 10592942  T
Q  183 agggtg 188  Q
    ||||||    
T  10592943 agggtg 10592948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 29719964 - 29720071
Alignment:
Q  82 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggtt 180  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||  |    
T  29719964 gtgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtct 29720063  T
Q  181 gcagggtg 188  Q
    ||||||||    
T  29720064 gcagggtg 29720071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 9789809 - 9789703
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||| | |||    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9789710  T
Q  182 cagggtg 188  Q
    |||||||    
T  9789709 cagggtg 9789703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 29751724 - 29751618
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||  | |||||||||| |||||||||||||||||||    
T  29751724 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagctaggttg 29751625  T
Q  182 cagggtg 188  Q
    |||||||    
T  29751624 cagggtg 29751618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 30631948 - 30631846
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||    
T  30631948 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgc 30631849  T
Q  183 agg 185  Q
    |||    
T  30631848 agg 30631846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 29722152 - 29722247
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctag 177  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagctag 29722247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 18442233 - 18442127
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  | ||||||||||| | |||    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 18442134  T
Q  182 cagggtg 188  Q
    |||||||    
T  18442133 cagggtg 18442127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 26177466 - 26177572
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||| | |||    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 26177565  T
Q  182 cagggtg 188  Q
    |||||||    
T  26177566 cagggtg 26177572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 27450409 - 27450307
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  || |||||||||||| ||||    
T  27450409 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 27450310  T
Q  183 agg 185  Q
    |||    
T  27450309 agg 27450307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 40379678 - 40379783
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| || | |||||||||||||| |||||    
T  40379678 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttg 40379776  T
Q  182 cagggtg 188  Q
    |||||||    
T  40379777 cagggtg 40379783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 1456638 - 1456732
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctag 177  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  || ||||||||||||    
T  1456638 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctag 1456732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 16546216 - 16546321
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||| || | |||||||||||||| |||||    
T  16546216 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttg 16546314  T
Q  182 cagggtg 188  Q
    |||||||    
T  16546315 cagggtg 16546321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 27445566 - 27445464
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||  || |||||||||||| ||||    
T  27445566 tgttgatattggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 27445467  T
Q  183 agg 185  Q
    |||    
T  27445466 agg 27445464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 29402550 - 29402652
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |  ||| |||||||| ||||    
T  29402550 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagctagtttgc 29402649  T
Q  183 agg 185  Q
    |||    
T  29402650 agg 29402652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 40381889 - 40381994
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||| ||||| || | |||||||||||||| |||||    
T  40381889 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttg 40381987  T
Q  182 cagggtg 188  Q
    |||||||    
T  40381988 cagggtg 40381994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 82 - 185
Target Start/End: Complemental strand, 43599319 - 43599215
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc-ggggtgccgtgagctaggtt 180  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||  ||| |||||||||||| ||    
T  43599319 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagttt 43599220  T
Q  181 gcagg 185  Q
    |||||    
T  43599219 gcagg 43599215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 82 - 185
Target Start/End: Complemental strand, 43604811 - 43604707
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc-ggggtgccgtgagctaggtt 180  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||  ||| |||||||||||| ||    
T  43604811 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagttt 43604712  T
Q  181 gcagg 185  Q
    |||||    
T  43604711 gcagg 43604707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 82 - 185
Target Start/End: Complemental strand, 43610303 - 43610199
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc-ggggtgccgtgagctaggtt 180  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||  ||| |||||||||||| ||    
T  43610303 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagttt 43610204  T
Q  181 gcagg 185  Q
    |||||    
T  43610203 gcagg 43610199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 83 - 178
Target Start/End: Original strand, 25077706 - 25077800
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctagg 178  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||||||||||||||    
T  25077706 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcga-ttggaggtgccgtgagctagg 25077800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 83 - 178
Target Start/End: Original strand, 25135675 - 25135769
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctagg 178  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||||||||||||||    
T  25135675 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcga-ttggaggtgccgtgagctagg 25135769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 24136470 - 24136378
Alignment:
Q  96 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||| ||| |||||| | ||||||||||||| ||||||||||    
T  24136470 ttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagtttgcagggtg 24136378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 16543994 - 16544069
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatt 158  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| |||||||    
T  16543994 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgatt 16544069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 16407641 - 16407747
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||| | | ||||||||||| | |||    
T  16407641 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 16407740  T
Q  182 cagggtg 188  Q
    |||||||    
T  16407741 cagggtg 16407747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 36931856 - 36931949
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| | | || |||||||| | ||||||||||    
T  36931856 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagctggtttgcagggtg 36931949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 15465125 - 15465019
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||| |||||||| | | ||||||||||| | |||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 15465026  T
Q  182 cagggtg 188  Q
    |||||||    
T  15465025 cagggtg 15465019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 26170370 - 26170463
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||| |||||||| | | ||||||||||| | ||||||||||    
T  26170370 cttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttgcagggtg 26170463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 15045279 - 15045178
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||||||| |||||| |||||||| | | |||||||||| || ||||    
T  15045279 tgttgatattggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgc 15045181  T
Q  183 agg 185  Q
    |||    
T  15045180 agg 15045178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 16409077 - 16409183
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||||| | | || |||||||| | |||    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagctggtttg 16409176  T
Q  182 cagggtg 188  Q
    || ||||    
T  16409177 caaggtg 16409183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 9352806 - 9352913
Alignment:
Q  82 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggtt 180  Q
    ||||||||||| | ||||||||||||||| || |||||||| ||||||||||| ||||| |||||||||| |||||||| |   ||||||||||| | ||    
T  9352806 gtgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagctggttt 9352905  T
Q  181 gcagggtg 188  Q
    ||||||||    
T  9352906 gcagggtg 9352913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 31180830 - 31180773
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  31180830 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 43592854 - 43592797
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  43592854 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 14520846 - 14520796
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14520846 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 37556137 - 37556199
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgat 157  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |  |||||| ||||||    
T  37556137 cttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgat 37556199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 37560959 - 37561004
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  37560959 cttcaaatttgtggtctggaagaacagagtaatcgtgacacgattt 37561004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 28807083 - 28807150
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgat 157  Q
    |||| |||||||||| |||||||||||||||| | ||||||| ||||||||||  |||||| ||||||    
T  28807083 attggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgat 28807150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 35388246 - 35388196
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtga 132  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  35388246 tgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 43625648 - 43625605
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaa 126  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||    
T  43625648 tgttgatattggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 5057451 - 5057485
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||||||||||||| |||||||||    
T  5057451 aatcgtgacacgattttggcatcgtagcacgattt 5057485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 12083658 - 12083708
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||| |||||| |||| ||||||||||| ||||||||||||||||||    
T  12083658 attggctttaaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 11916457 - 11916502
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||| || |||||||| ||||||||||||| ||||    
T  11916457 cttcaaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 9036003 - 9036108
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  9036003 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 9036102  T
Q  183 agggtg 188  Q
    ||||||    
T  9036103 agggtg 9036108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 20622821 - 20622715
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||  ||    
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 20622722  T
Q  182 cagggtg 188  Q
    |||||||    
T  20622721 cagggtg 20622715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 21053540 - 21053634
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctag 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||    
T  21053540 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagctag 21053634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 40281958 - 40282064
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||| | |||||||||||||||||||    
T  40281958 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctaggttg 40282057  T
Q  182 cagggtg 188  Q
    |||||||    
T  40282058 cagggtg 40282064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 44203218 - 44203321
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || | |||||||||||||| |||||    
T  44203218 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttg 44203316  T
Q  182 caggg 186  Q
    |||||    
T  44203317 caggg 44203321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 24202251 - 24202357
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| | ||||||||||| | |||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 24202350  T
Q  182 cagggtg 188  Q
    |||||||    
T  24202351 cagggtg 24202357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 9986785 - 9986878
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagct 175  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||  |||||||||| |||||||||||||    
T  9986785 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagct 9986878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 19365767 - 19365874
Alignment:
Q  82 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggtt 180  Q
    ||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||||| | | ||||||||||| | ||    
T  19365767 gtgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 19365866  T
Q  181 gcagggtg 188  Q
    ||||||||    
T  19365867 gcagggtg 19365874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 51764990 - 51765096
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||| | ||||||||||| | |||    
T  51764990 tgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 51765089  T
Q  182 cagggtg 188  Q
    |||||||    
T  51765090 cagggtg 51765096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 39446082 - 39446006
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  39446082 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 39446006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 44023377 - 44023452
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatt 158  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  44023377 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 44023452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 13604095 - 13604197
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||| | | || |||||||| | |||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 13604194  T
Q  182 cag 184  Q
    |||    
T  13604195 cag 13604197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 19360912 - 19361018
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||| |||||||| | | ||||||||||| | |||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 19361011  T
Q  182 cagggtg 188  Q
    |||||||    
T  19361012 cagggtg 19361018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 41391173 - 41391084
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagg 185  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||| | | |||||||||| || |||||||    
T  41391173 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgcagg 41391084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 1054514 - 1054581
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtg 150  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  1054514 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtg 1054581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 24793665 - 24793723
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24793665 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 25439406 - 25439475
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||| |  |||||| ||||||||    
T  25439406 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt 25439475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 25444599 - 25444668
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||| |  |||||| ||||||||    
T  25444599 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt 25444668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 13599017 - 13598967
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  13599017 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 21536125 - 21536170
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21536125 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21536170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 41398809 - 41398764
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  41398809 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 41398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 37070378 - 37070334
Alignment:
Q  96 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||    
T  37070378 ttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 26644381 - 26644450
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||| ||| ||||||||||| ||||||||||| | |||||||| ||||||||| ||||||  ||||||||    
T  26644381 attggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattt 26644450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 13549745 - 13549711
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||||||| |||||||||||||||    
T  13549745 aatcgtgacacgattttggaatcgtggcacgattt 13549711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 19754007 - 19754041
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||||||| |||||||||||||||    
T  19754007 aatcgtgacacgattttgggatcgtggcacgattt 19754041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 3282318 - 3282273
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||||||||||||  ||||||||||  |||||||||||||||||    
T  3282318 cttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 13659897 - 13659840
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  13659897 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 13659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 16124197 - 16124238
Alignment:
Q  99 aaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||| ||||||||||| |||||||||| |||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 24793709 - 24793749
Alignment:
Q  145 atcgtggcacgatttcggggtgccgtgagctaggttgcagg 185  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagtttgcagg 24793749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 7e-48; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 54634707 - 54634815
Alignment:
Q  80 aagtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggt 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||    
T  54634707 aagtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaagt 54634806  T
Q  180 tgcagggtg 188  Q
    |||||||||    
T  54634807 tgcagggtg 54634815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 6716085 - 6716190
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  6716085 tgttgagattgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 6716184  T
Q  183 agggtg 188  Q
    ||||||    
T  6716185 agggtg 6716190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 40372256 - 40372358
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  40372256 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 40372355  T
Q  183 agg 185  Q
    |||    
T  40372356 agg 40372358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 3617034 - 3617137
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||||    
T  3617034 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 3617132  T
Q  182 caggg 186  Q
    |||||    
T  3617133 caggg 3617137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 22172662 - 22172764
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||    
T  22172662 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgc 22172761  T
Q  183 agg 185  Q
    |||    
T  22172762 agg 22172764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 8478002 - 8477903
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  8478002 tgttgacattggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 8477903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 4601329 - 4601225
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggtt 180  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||| || |||||||||||| ||||    
T  4601329 gtgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttc-ggatgccgtgagctagggtt 4601231  T
Q  181 gcaggg 186  Q
    ||||||    
T  4601230 gcaggg 4601225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 4599107 - 4599004
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||| || |||||||||||| |||||    
T  4599107 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttc-ggatgccgtgagctagggttg 4599009  T
Q  182 caggg 186  Q
    |||||    
T  4599008 caggg 4599004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 25637013 - 25637097
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgc 167  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||    
T  25637013 tgttgagattgtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtgc 25637097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 800685 - 800791
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||| | |||    
T  800685 tgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 800784  T
Q  182 cagggtg 188  Q
    | |||||    
T  800785 cggggtg 800791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 7167882 - 7167780
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| |||||  ||||||||||||||| ||||    
T  7167882 tgttgatattggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagtttgc 7167783  T
Q  183 agg 185  Q
    |||    
T  7167782 agg 7167780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 28501152 - 28501254
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||  || |||||||||||| ||||    
T  28501152 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 28501251  T
Q  183 agg 185  Q
    |||    
T  28501252 agg 28501254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 28503319 - 28503418
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||  || |||||||||||| ||||    
T  28503319 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 28503418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 7782712 - 7782606
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||| | ||| ||||||| | |||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagctggtttg 7782613  T
Q  182 cagggtg 188  Q
    |||||||    
T  7782612 cagggtg 7782606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 82 - 186
Target Start/End: Original strand, 10208777 - 10208881
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggtt 180  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||| | ||||||| || ||||||||| || ||||    
T  10208777 gtgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggtt 10208875  T
Q  181 gcaggg 186  Q
    ||||||    
T  10208876 gcaggg 10208881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 18657029 - 18656940
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtga 172  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  18657029 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtga 18656940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 10055805 - 10055908
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || |||||    
T  10055805 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10055903  T
Q  182 caggg 186  Q
    |||||    
T  10055904 caggg 10055908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 10058027 - 10058130
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || |||||    
T  10058027 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10058125  T
Q  182 caggg 186  Q
    |||||    
T  10058126 caggg 10058130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 10060249 - 10060352
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || |||||    
T  10060249 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10060347  T
Q  182 caggg 186  Q
    |||||    
T  10060348 caggg 10060352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 10062471 - 10062574
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || |||||    
T  10062471 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10062569  T
Q  182 caggg 186  Q
    |||||    
T  10062570 caggg 10062574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 10064693 - 10064796
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || |||||    
T  10064693 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10064791  T
Q  182 caggg 186  Q
    |||||    
T  10064792 caggg 10064796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 10066915 - 10067018
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || |||||    
T  10066915 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10067013  T
Q  182 caggg 186  Q
    |||||    
T  10067014 caggg 10067018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 1306604 - 1306498
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | |||||||||| |||||||||||||||| |||||||||||| || |||||||||||| |||||||||| |||| |||||||| | |||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagctggtttg 1306505  T
Q  182 cagggtg 188  Q
    |||||||    
T  1306504 cagggtg 1306498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 23198530 - 23198424
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||||||| | | ||||||||||| | |||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 23198431  T
Q  182 cagggtg 188  Q
    |||||||    
T  23198430 cagggtg 23198424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 23200729 - 23200623
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| | | ||| ||||||| | |||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagctggtttg 23200630  T
Q  182 cagggtg 188  Q
    |||||||    
T  23200629 cagggtg 23200623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 26928080 - 26928186
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| |   ||||||||||| | |||    
T  26928080 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 26928179  T
Q  182 cagggtg 188  Q
    |||||||    
T  26928180 cagggtg 26928186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 6718288 - 6718345
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6718288 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 45282585 - 45282642
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45282585 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 10210978 - 10211054
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  10210978 tgttgagattgtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt 10211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 33386136 - 33386243
Alignment:
Q  82 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggtt 180  Q
    ||||||||||| | |||||||||||||||| | |||||||| ||||||||||||||| |||||||||||| |||||||| | | ||||||||||| | ||    
T  33386136 gtgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 33386235  T
Q  181 gcagggtg 188  Q
    ||||||||    
T  33386236 gcagggtg 33386243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 37408036 - 37408142
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||| |||||||| |  |||||||||||| | |||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagctggtttg 37408135  T
Q  182 cagggtg 188  Q
    |||||||    
T  37408136 cagggtg 37408142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 27352097 - 27352182
Alignment:
Q  99 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcag 184  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||  ||||||||||||| | ||||||    
T  27352097 aaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgtttgcag 27352182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 37726299 - 37726193
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| ||||  |||||| |||||||| | | ||||||||||| | |||    
T  37726299 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagctggtttg 37726200  T
Q  182 cagggtg 188  Q
    |||||||    
T  37726199 cagggtg 37726193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 27453582 - 27453475
Alignment:
Q  82 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggtt 180  Q
    ||||||||||| | |||||||||||||||||| |||| ||| ||||| ||||||||| |||||||||||| |||||||| | | ||||||||||| | ||    
T  27453582 gtgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 27453483  T
Q  181 gcagggtg 188  Q
    | ||||||    
T  27453482 gtagggtg 27453475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 8738541 - 8738599
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||    
T  8738541 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 8738599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 9090779 - 9090837
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||    
T  9090779 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 9090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 36029709 - 36029640
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||  || |||| ||||||||    
T  36029709 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttatcaacgtgtcacgattt 36029640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 32143928 - 32143868
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 142  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattttg 32143868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 40734084 - 40734132
Alignment:
Q  92 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734084 tgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 27974446 - 27974493
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 142  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  27974446 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 2672431 - 2672493
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgat 157  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||  |||||| ||||||    
T  2672431 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2672493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 2676587 - 2676649
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgat 157  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||  |||||| ||||||    
T  2676587 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2676649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 16264946 - 16264896
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16264946 attggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 21711818 - 21711768
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21711818 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 30709266 - 30709316
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  30709266 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 27027318 - 27027273
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 2671111 - 2671167
Alignment:
Q  129 gtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagg 185  Q
    |||||||||||||||||||||| || ||||||  ||||||||||||||| |||||||    
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagctagtttgcagg 2671167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 6718338 - 6718374
Alignment:
Q  152 cacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||||||||||||||||||||||||||||||||||    
T  6718338 cacgatttcggggtgccgtgagctaggttgcagggtg 6718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 45282635 - 45282671
Alignment:
Q  152 cacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||||||||||||||||||||||||||||||||||    
T  45282635 cacgatttcggggtgccgtgagctaggttgcagggtg 45282671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 40845283 - 40845220
Alignment:
Q  79 aaagtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 141  Q
    |||||||||||||| |||||||||||| || | ||| ||||||| |||||||||||||||||||    
T  40845283 aaagtgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatttt 40845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 27985971 - 27986017
Alignment:
Q  96 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 142  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 39032025 - 39032075
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  39032025 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 32476066 - 32475997
Alignment:
Q  88 agattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgat 157  Q
    |||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| | ||||||| ||||||    
T  32476066 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32475997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 32480924 - 32480855
Alignment:
Q  88 agattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgat 157  Q
    |||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| | ||||||| ||||||    
T  32480924 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32480855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 40735015 - 40735063
Alignment:
Q  92 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||||||||||||||| |||| ||||||  |||||||||||||||||    
T  40735015 tgtcttcaaatttgtggtttggatgaacagataaatcgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 1730916 - 1730959
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgac 133  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||    
T  1730916 attggcttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 4569353 - 4569387
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||||||||||||||||||||||||||||| ||||    
T  4569353 aatcgtgacacgattttggcatcgtggcacaattt 4569387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 27038658 - 27038608
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| |||||| |||||||| ||||| ||||| ||||||||||||||||||    
T  27038658 attggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgattt 27038608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 35926106 - 35926057
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  35926106 attggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 40592252 - 40592302
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| |||||    
T  40592252 attggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 48438832 - 48438782
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||| ||||||||||| || |||||||| ||||||||||||||||||    
T  48438832 attggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 55302730 - 55302696
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||||||||||||||||||||| ||||||||||||    
T  55302730 aatcgtgacacgattttggcattgtggcacgattt 55302696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 16498637 - 16498694
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  16498637 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 16498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 3439088 - 3439193
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  3439088 tgttgagattgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 3439187  T
Q  183 agggtg 188  Q
    ||||||    
T  3439188 agggtg 3439193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 33037287 - 33037389
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  33037287 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 33037386  T
Q  183 agg 185  Q
    |||    
T  33037387 agg 33037389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 36980014 - 36979912
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  36980014 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 36979915  T
Q  183 agg 185  Q
    |||    
T  36979914 agg 36979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 30656285 - 30656180
Alignment:
Q  80 aagtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggt 179  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||| |    
T  30656285 aagtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtt 30656186  T
Q  180 tgcagg 185  Q
    ||||||    
T  30656185 tgcagg 30656180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 4759534 - 4759636
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||    
T  4759534 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagtttgc 4759633  T
Q  183 agg 185  Q
    |||    
T  4759634 agg 4759636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 10683739 - 10683841
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||||    
T  10683739 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 10683838  T
Q  183 agg 185  Q
    |||    
T  10683839 agg 10683841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 18852627 - 18852729
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||  ||||||||||||||| ||||    
T  18852627 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 18852726  T
Q  183 agg 185  Q
    |||    
T  18852727 agg 18852729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 6311928 - 6311833
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagg 185  Q
    |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||  ||||||||||||||| |||||||    
T  6311928 attggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcagg 6311833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 18870021 - 18870123
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  | || |||||||||| ||||    
T  18870021 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagtttgc 18870120  T
Q  183 agg 185  Q
    |||    
T  18870121 agg 18870123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 31042908 - 31043014
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | |||||||||||||||||||||||| || ||||||||||||||| |||||||||||| |||||||||| ||||||||||||| | |||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctggtttg 31043007  T
Q  182 cagggtg 188  Q
    |||||||    
T  31043008 cagggtg 31043014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 2627316 - 2627424
Alignment:
Q  81 agtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggt 179  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | | ||||||||| | |    
T  2627316 agtgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagctggtt 2627415  T
Q  180 tgcagggtg 188  Q
    |||| ||||    
T  2627416 tgcatggtg 2627424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 42575909 - 42575806
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||| || ||||||||| || |||||    
T  42575909 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttc-ggatgccgtgagttagggttg 42575811  T
Q  182 caggg 186  Q
    |||||    
T  42575810 caggg 42575806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 25327664 - 25327766
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  |  || ||||||||| ||||    
T  25327664 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagctagtttgc 25327763  T
Q  183 agg 185  Q
    |||    
T  25327764 agg 25327766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 82 - 186
Target Start/End: Original strand, 15290142 - 15290246
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggtt 180  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | | ||||||||| || ||||||||| || ||||    
T  15290142 gtgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttc-ggatgccgtgagttagggtt 15290240  T
Q  181 gcaggg 186  Q
    ||||||    
T  15290241 gcaggg 15290246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 82 - 186
Target Start/End: Original strand, 15470511 - 15470615
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggtt 180  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | | ||||||||| || ||||||||| || ||||    
T  15470511 gtgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttc-ggatgccgtgagttagggtt 15470609  T
Q  181 gcaggg 186  Q
    ||||||    
T  15470610 gcaggg 15470615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 7289427 - 7289530
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc-ggggtgccgtgagctaggttg 181  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||  ||| ||| |||||||| |||    
T  7289427 tgttgatattgacttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagctagtttg 7289526  T
Q  182 cagg 185  Q
    ||||    
T  7289527 cagg 7289530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 26288517 - 26288411
Alignment:
Q  83 tgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| || ||||| | | ||||||||||| | |||    
T  26288517 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26288418  T
Q  182 cagggtg 188  Q
    |||||||    
T  26288417 cagggtg 26288411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 26301774 - 26301668
Alignment:
Q  83 tgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| || ||||| | | ||||||||||| | |||    
T  26301774 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26301675  T
Q  182 cagggtg 188  Q
    |||||||    
T  26301674 cagggtg 26301668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 26313768 - 26313662
Alignment:
Q  83 tgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| || ||||| | | ||||||||||| | |||    
T  26313768 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttg 26313669  T
Q  182 cagggtg 188  Q
    |||||||    
T  26313668 cagggtg 26313662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 1261428 - 1261520
Alignment:
Q  96 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||||||||||| ||||||||||  ||||||| ||||||| |||||||||||| |||||||||| | ||||||||||||| ||||||||||    
T  1261428 ttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtg 1261520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 158
Target Start/End: Original strand, 39784325 - 39784400
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatt 158  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  39784325 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 39784400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 7412939 - 7412846
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||  |   ||||||||||| | ||||||||||    
T  7412939 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagctggtttgcagggtg 7412846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 25689561 - 25689618
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25689561 tgttgagattgtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 10688618 - 10688675
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10688618 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 5701959 - 5702009
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  5701959 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 11383406 - 11383440
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||||||||||||||||||||||||||||||||||    
T  11383406 aatcgtgacacgattttggcatcgtggcacgattt 11383440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 4456620 - 4456575
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  4456620 cttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 25689604 - 25689646
Alignment:
Q  145 atcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  25689604 atcgtgacacgatttcggg-tgccgtgagctaggttgcagggtg 25689646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 23799105 - 23799149
Alignment:
Q  96 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||||||||||| || |||||||| |||||||| |||||||||    
T  23799105 ttcaaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 20343500 - 20343599
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  20343500 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 20343599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 24789423 - 24789532
Alignment:
Q  80 aagtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctagg 178  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||     
T  24789423 aagtgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagt 24789522  T
Q  179 ttgcagggtg 188  Q
    ||||||||||    
T  24789523 ttgcagggtg 24789532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 21640423 - 21640321
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  21640423 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 21640324  T
Q  183 agg 185  Q
    |||    
T  21640323 agg 21640321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 6592921 - 6592818
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||||    
T  6592921 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 6592823  T
Q  182 caggg 186  Q
    |||||    
T  6592822 caggg 6592818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 32060888 - 32060785
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||||    
T  32060888 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 32060790  T
Q  182 caggg 186  Q
    |||||    
T  32060789 caggg 32060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 20357027 - 20357130
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||| |||    
T  20357027 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttg 20357126  T
Q  182 cagg 185  Q
    ||||    
T  20357127 cagg 20357130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 6595137 - 6595034
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||||    
T  6595137 tgttgagattgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 6595039  T
Q  182 caggg 186  Q
    |||||    
T  6595038 caggg 6595034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 82 - 185
Target Start/End: Complemental strand, 2058605 - 2058503
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | ||||||||||||||| |||    
T  2058605 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt-gaggtgccgtgagctagtttg 2058507  T
Q  182 cagg 185  Q
    ||||    
T  2058506 cagg 2058503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 1562587 - 1562509
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcg 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  1562587 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg 1562509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 43504708 - 43504615
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||| | ||||||||||    
T  43504708 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtg 43504615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 18392780 - 18392675
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||| || | |||||||||||||| |||||    
T  18392780 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttg 18392682  T
Q  182 cagggtg 188  Q
    |||||||    
T  18392681 cagggtg 18392675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 83 - 183
Target Start/End: Complemental strand, 12406857 - 12406757
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  |  |||||||||||| ||||    
T  12406857 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 12406758  T
Q  183 a 183  Q
    |    
T  12406757 a 12406757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 18414275 - 18414171
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | |||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||| | |||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagctggtttg 18414176  T
Q  182 caggg 186  Q
    |||||    
T  18414175 caggg 18414171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 4873723 - 4873644
Alignment:
Q  81 agtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc 160  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  4873723 agtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 4873644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 39730932 - 39731039
Alignment:
Q  82 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggtt 180  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| | | ||||||||||| | ||    
T  39730932 gtgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 39731031  T
Q  181 gcagggtg 188  Q
    ||||||||    
T  39731032 gcagggtg 39731039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 31109070 - 31109147
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc 160  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31109070 tgttgaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttc 31109147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 12397492 - 12397390
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||||||||  |  |||||||||||| ||||    
T  12397492 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttcaagtggccgtgagctagtttgc 12397393  T
Q  183 agg 185  Q
    |||    
T  12397392 agg 12397390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 18409399 - 18409293
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||| ||||||||||||| |||||||| |||||| |||||||||||| |||||||| | ||||||||||||| | |||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagctggtttg 18409300  T
Q  182 cagggtg 188  Q
    |||||||    
T  18409299 cagggtg 18409293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 48408398 - 48408504
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||||| | | ||||||||||| | |||    
T  48408398 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 48408497  T
Q  182 cagggtg 188  Q
    |||||||    
T  48408498 cagggtg 48408504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 21646630 - 21646537
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    ||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||| |||||||||| | ||||||||||| | ||||||||||    
T  21646630 cttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtg 21646537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 24023831 - 24023896
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc 160  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24023831 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttc 24023896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 1532897 - 1532958
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacga 156  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  1532897 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 47264254 - 47264190
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||| |||||||| || |||||||||||||||||||||||||||| ||||||||    
T  47264254 cttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattt 47264190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 2479947 - 2479854
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    ||||||||||||||| || |||||||| ||||| |||||||||||||||||||||| ||||||||     ||||||||||| | ||||||||||    
T  2479947 cttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagctggtttgcagggtg 2479854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 18390562 - 18390506
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 139  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18390562 tgttgagattgtcttcaaatttgtggtttagaagaacagggaaatcgtgccacgatt 18390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 44847632 - 44847696
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||| |  |||||||| |||||||||||||||||||||||||||| ||||||||    
T  44847632 cttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 21983859 - 21983760
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtga 189  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||   ||||||| |||||||| |   || |||||||| | |||||||||||    
T  21983859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttgcagggtga 21983760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 21811751 - 21811813
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgat 157  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||||| ||||||| ||||||    
T  21811751 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgat 21811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 25767527 - 25767440
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||||||||||||||||||       ||||||||||||| | |||||||||||| |||||||||| | ||||||||||| | ||||||||||    
T  25767527 cttcaaatttgtggtctggaaa------gaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtg 25767440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 21989518 - 21989454
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||| ||||||||||| |||||||||||| |||||   ||||||| ||||||||    
T  21989518 cttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattt 21989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 80005 - 79955
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||| | ||||||||||| ||||||||||||||||||    
T  80005 attggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 1532947 - 1533009
Alignment:
Q  126 atcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    |||||||||||| |||||||||||| || ||||| | |||||| |||||||| ||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagtttgcagggtg 1533009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 14070382 - 14070348
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||||||||||||||||||||||||||||||||||    
T  14070382 aatcgtgacacgattttggcatcgtggcacgattt 14070348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 14380410 - 14380376
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||||||||||||||||||||||||||||||||||    
T  14380410 aatcgtgacacgattttggcatcgtggcacgattt 14380376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 24260828 - 24260895
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgat 157  Q
    |||| ||||||||||||||| ||| ||||||| | ||||||| |||||||| | ||||||| ||||||    
T  24260828 attggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 24260895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 30814271 - 30814305
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||||||| |||||||||||||||    
T  30814271 aatcgtgacacgattttggaatcgtggcacgattt 30814305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 141
Target Start/End: Complemental strand, 49092282 - 49092237
Alignment:
Q  96 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 141  Q
    ||||||||||| || ||||||||||| ||||| |||||||||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgatttt 49092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 3187 - 3082
Alignment:
Q  81 agtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggt 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||    
T  3187 agtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggt 3089  T
Q  180 tgcaggg 186  Q
    |||||||    
T  3088 tgcaggg 3082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 24742577 - 24742475
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  24742577 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 24742478  T
Q  183 agg 185  Q
    |||    
T  24742477 agg 24742475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 8392982 - 8393085
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||||    
T  8392982 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 8393080  T
Q  182 caggg 186  Q
    |||||    
T  8393081 caggg 8393085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 8395191 - 8395294
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||||    
T  8395191 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 8395289  T
Q  182 caggg 186  Q
    |||||    
T  8395290 caggg 8395294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 31495902 - 31495796
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | ||||||||||| | |||    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 31495803  T
Q  182 cagggtg 188  Q
    |||||||    
T  31495802 cagggtg 31495796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 51521052 - 51520948
Alignment:
Q  81 agtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggtt 180  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  || |||||||||||| ||    
T  51521052 agtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagttt 51520953  T
Q  181 gcagg 185  Q
    |||||    
T  51520952 gcagg 51520948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 7122267 - 7122370
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||||    
T  7122267 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 7122365  T
Q  182 caggg 186  Q
    |||||    
T  7122366 caggg 7122370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 7124489 - 7124592
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||||    
T  7124489 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 7124587  T
Q  182 caggg 186  Q
    |||||    
T  7124588 caggg 7124592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 9223899 - 9224001
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  |  |||||||||||| ||||    
T  9223899 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 9223998  T
Q  183 agg 185  Q
    |||    
T  9223999 agg 9224001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 56141511 - 56141613
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | || | |||||||||| ||||    
T  56141511 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagtttgc 56141610  T
Q  183 agg 185  Q
    |||    
T  56141611 agg 56141613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 9228686 - 9228788
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  |  |||||||||| | ||||    
T  9228686 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctcgtttgc 9228785  T
Q  183 agg 185  Q
    |||    
T  9228786 agg 9228788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 13992879 - 13992773
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| | || |||||||| | |||    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagctggtttg 13992780  T
Q  182 cagggtg 188  Q
    |||||||    
T  13992779 cagggtg 13992773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 3814605 - 3814528
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc 160  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  3814605 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 3814528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 5733247 - 5733158
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtga 172  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  5733247 tgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtga 5733158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 5135649 - 5135752
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || |||||    
T  5135649 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 5135747  T
Q  182 caggg 186  Q
    |||||    
T  5135748 caggg 5135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 5137875 - 5137978
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| || |||||    
T  5137875 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 5137973  T
Q  182 caggg 186  Q
    |||||    
T  5137974 caggg 5137978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 28467974 - 28468083
Alignment:
Q  80 aagtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctagg 178  Q
    ||||||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||  |||||||| | | ||||||||||| |     
T  28467974 aagtgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagctggt 28468073  T
Q  179 ttgcagggtg 188  Q
    ||||||||||    
T  28468074 ttgcagggtg 28468083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 18856309 - 18856234
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatt 158  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  18856309 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18856234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 18860521 - 18860446
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatt 158  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  18860521 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 7716115 - 7716051
Alignment:
Q  18 agactatgtgaatcttatctctatacctgaatgggcaacatcactgcaagtatttgatatcaaag 82  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  7716115 agactgtgtgaatcttacatctatacctgaatgggcaacatcactgcaagtatttgatatcaaag 7716051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 31985127 - 31985233
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||| |||| |||||||| ||||||||||||||| |||||||||||| |||||||| | | | ||||||||||| | |    
T  31985127 tgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagctagttag 31985226  T
Q  182 cagggtg 188  Q
    |||||||    
T  31985227 cagggtg 31985233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 45347324 - 45347392
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatt 158  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||    
T  45347324 attggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgatt 45347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 5148294 - 5148195
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtga 189  Q
    |||| ||||||||||||||| |||||||| || |||||||||||||||||||  || |||| |||||||| |   || |||||||||| |||||||||||    
T  5148294 attggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagtttgcagggtga 5148195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 8689044 - 8689097
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgg 143  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8689044 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgg 8689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 29761227 - 29761182
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  29761227 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 5143859 - 5143807
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 142  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  5143859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 7126669 - 7126614
Alignment:
Q  27 gaatcttatctctatacctgaatgggcaacatcactgcaagtatttgatatcaaag 82  Q
    ||||||||  |||||||||||||||||||||||||||||||| || ||||||||||    
T  7126669 gaatcttacatctatacctgaatgggcaacatcactgcaagtgttagatatcaaag 7126614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 7503061 - 7503116
Alignment:
Q  27 gaatcttatctctatacctgaatgggcaacatcactgcaagtatttgatatcaaag 82  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||    
T  7503061 gaatcttacatctatacctgaatgggtaaaatcactgcaagtatttgatatcaaag 7503116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 7719935 - 7719880
Alignment:
Q  27 gaatcttatctctatacctgaatgggcaacatcactgcaagtatttgatatcaaag 82  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||    
T  7719935 gaatcttacatctatacctgaatgggtaaaatcactgcaagtatttgatatcaaag 7719880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 7522526 - 7522584
Alignment:
Q  24 tgtgaatcttatctctatacctgaatgggcaacatcactgcaagtatttgatatcaaag 82  Q
    |||||||||||  |||||||||||||||| ||||||||||||||||||| | |||||||    
T  7522526 tgtgaatcttacatctatacctgaatgggtaacatcactgcaagtattttacatcaaag 7522584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 16628353 - 16628403
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16628353 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 18712295 - 18712357
Alignment:
Q  123 gaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagg 185  Q
    |||||||||||||||||||||||||||| |||||||||  |  |||||||||||| |||||||    
T  18712295 gaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcagg 18712357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 38151918 - 38151968
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  38151918 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 3778165 - 3778116
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 139  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  3778165 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 10477707 - 10477662
Alignment:
Q  37 tctatacctgaatgggcaacatcactgcaagtatttgatatcaaag 82  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||    
T  10477707 tctatacctgaatgggtaacaacactgcaagtatttgatatcaaag 10477662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 5268699 - 5268750
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatttt 141  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  5268699 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 6742896 - 6742946
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  6742896 attggcttcaaatttatggtttggaagaacagagaaatcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 10047982 - 10047932
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||    
T  10047982 attggcttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 16622774 - 16622824
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  16622774 attggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 7484472 - 7484527
Alignment:
Q  27 gaatcttatctctatacctgaatgggcaacatcactgcaagtatttgatatcaaag 82  Q
    ||||||||  |||||||||||||||| || |||||| |||||||| ||||||||||    
T  7484472 gaatcttacatctatacctgaatgggtaaaatcactacaagtattagatatcaaag 7484527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 7530597 - 7530644
Alignment:
Q  27 gaatcttatctctatacctgaatgggcaacatcactgcaagtatttga 74  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||    
T  7530597 gaatcttacatctatacctgaatgggtaaaatcactgcaagtatttga 7530644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 54867795 - 54867745
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| |||||||| || ||| ||||||||||||||    
T  54867795 attggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 7496871 - 7496916
Alignment:
Q  27 gaatcttatctctatacctgaatgggcaacatcactgcaagtattt 72  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||    
T  7496871 gaatcttacatctatacctgaatgggtaaaatcactgcaagtattt 7496916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 36314716 - 36314761
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36314716 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 36328925 - 36328970
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  36328925 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 29761196 - 29761156
Alignment:
Q  145 atcgtggcacgatttcggggtgccgtgagctaggttgcagg 185  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagtttgcagg 29761156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 6e-36; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 12647967 - 12647864
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| |||||    
T  12647967 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 12647869  T
Q  182 caggg 186  Q
    |||||    
T  12647868 caggg 12647864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 9295862 - 9295964
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||| ||||    
T  9295862 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 9295961  T
Q  183 agg 185  Q
    |||    
T  9295962 agg 9295964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 185
Target Start/End: Complemental strand, 14292125 - 14292023
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||    
T  14292125 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagtttgc 14292026  T
Q  183 agg 185  Q
    |||    
T  14292025 agg 14292023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 11098387 - 11098489
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||  ||||||||||||||| ||||    
T  11098387 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagtttgc 11098486  T
Q  183 agg 185  Q
    |||    
T  11098487 agg 11098489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 4484923 - 4484817
Alignment:
Q  83 tgttgagattgt-cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||  | ||||||||||||| |||    
T  4484923 tgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagtttg 4484824  T
Q  182 cagggtg 188  Q
    |||||||    
T  4484823 cagggtg 4484817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 6266274 - 6266380
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||| ||| |||||| | ||||||||||| | |||    
T  6266274 tgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagctggtttg 6266373  T
Q  182 cagggtg 188  Q
    |||||||    
T  6266374 cagggtg 6266380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 32289148 - 32289254
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| | | ||||||||||| | |||    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 32289247  T
Q  182 cagggtg 188  Q
    |||||||    
T  32289248 cagggtg 32289254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 39811477 - 39811554
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc 160  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  39811477 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 39811554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 44310471 - 44310548
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc 160  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  44310471 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 44310548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 30832921 - 30833027
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||| || |||| ||||||| |||||||||| | ||||||||||| | |||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 30833020  T
Q  182 cagggtg 188  Q
    |||||||    
T  30833021 cagggtg 30833027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 25410253 - 25410160
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||| | | ||||||||| | | ||||||||||    
T  25410253 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagatggtttgcagggtg 25410160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 32247352 - 32247276
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  32247352 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 32247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 3492377 - 3492271
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||| ||||||||| |||||||||||| |||||||| | | ||||||||||| | |||    
T  3492377 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 3492278  T
Q  182 cagggtg 188  Q
    |||||||    
T  3492277 cagggtg 3492271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 40739457 - 40739351
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | |||||||||||||||||||||||||||  |||||||||||||| |||||||||||| |||||||| |   ||||||||||| | |||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 40739358  T
Q  182 cagggtg 188  Q
    |||||||    
T  40739357 cagggtg 40739351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 8389631 - 8389681
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  8389631 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 36757425 - 36757477
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 142  Q
    |||| ||||||||||||||| |||||||||||  |||||||||||||||||||    
T  36757425 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattttg 36757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 28258682 - 28258729
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 142  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  28258682 cttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 10706733 - 10706783
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  10706733 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 21630561 - 21630511
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||||||||    
T  21630561 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 33528105 - 33528155
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  33528105 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 39483493 - 39483443
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  39483493 attggcttcaaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 20522838 - 20522794
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 134  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||    
T  20522838 attggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 7450797 - 7450831
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||||||| |||||||||||||||    
T  7450797 aatcgtgacacgattttgggatcgtggcacgattt 7450831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 17863812 - 17863846
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||||||||||||| |||||||||    
T  17863812 aatcgtgacacgattttggcatcgtcgcacgattt 17863846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 23077952 - 23078002
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||| || |||| ||||||||||| ||||||||||||||||||    
T  23077952 attggcttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 83 - 186
Target Start/End: Complemental strand, 4310 - 4207
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||   |||||||||||||| |||||    
T  4310 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattt-taggtgccgtgagctagggttg 4212  T
Q  182 caggg 186  Q
    |||||    
T  4211 caggg 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 9308 - 9202
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| | ||||||||||| | |||    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9209  T
Q  182 cagggtg 188  Q
    |||||||    
T  9208 cagggtg 9202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 11753 - 11647
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||  | ||||||||||| | |||    
T  11753 tgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 11654  T
Q  182 cagggtg 188  Q
    |||||||    
T  11653 cagggtg 11647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 17431 - 17537
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| | ||||||||||| | |||    
T  17431 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 17530  T
Q  182 cagggtg 188  Q
    |||||||    
T  17531 cagggtg 17537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 83 - 188
Target Start/End: Original strand, 5859 - 5964
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagcta-ggttg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||| || | |||||||||||||| |||||    
T  5859 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacga-ttggaggtgccgtgagctagggttg 5957  T
Q  182 cagggtg 188  Q
    |||||||    
T  5958 cagggtg 5964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 62; Significance: 5e-27; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 21953 - 22042
Alignment:
Q  96 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagg 185  Q
    |||||||||||||||||||||||||| ||||||| |||| || |||||||||||| |||||||||| ||||||||||||||| |||||||    
T  21953 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcagg 22042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 34554 - 34631
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttc 160  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  34554 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttc 34631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 1708 - 1784
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatt 158  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  1708 gtgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 188
Target Start/End: Original strand, 7910 - 8017
Alignment:
Q  82 gtgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggtt 180  Q
    ||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||||| | | ||||||||| | | ||    
T  7910 gtgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagttggttt 8009  T
Q  181 gcagggtg 188  Q
    ||||||||    
T  8010 gcagggtg 8017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 3337 - 3431
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctag 177  Q
    |||||| |||| |||||||||||||||||||||||| || |||||||||||||||||||| ||||||| |||||||||  |  ||||||||||||    
T  3337 tgttgatattggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctag 3431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 55; Significance: 8e-23; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 132752 - 132854
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttg 181  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||| | | || |||||||| | |||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 132851  T
Q  182 cag 184  Q
    |||    
T  132852 cag 132854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 6302 - 6252
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||||    
T  6302 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 3110 - 3060
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||| ||||||||||||||| ||||||||||| |||||| |||||||||||    
T  3110 attggcttcaaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 149658 - 149601
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| |||||    
T  149658 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 149601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 945 - 870
Alignment:
Q  83 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgatt 158  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  945 tgttgaaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 8274 - 8216
Alignment:
Q  82 gtgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 140  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  8274 gtgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 523 - 588
Alignment:
Q  123 gaaatcgtgacacgattttggcatcgtggcacgatttcggggtgccgtgagctaggttgcagggtg 188  Q
    ||||||||||||||| |||||||||||| |||||||||| | ||||||||||||| ||||||||||    
T  523 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtg 588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 1096 - 1160
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||| || ||||||||  ||||||||||||||||||||||||||| ||||||||    
T  1096 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 43447 - 43511
Alignment:
Q  95 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||||||||| |||| |||||||| || ||||||||||||||||| |||||||||| ||||||||    
T  43447 cttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattt 43511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 36332 - 36384
Alignment:
Q  90 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 142  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||| |||||||||    
T  36332 attggcttcaaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 45804 - 45744
Alignment:
Q  83 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttg 142  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  45804 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 6750 - 6784
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    |||||||||||||||||||||||||||||||||||    
T  6750 aatcgtgacacgattttggcatcgtggcacgattt 6784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 81049 - 81015
Alignment:
Q  125 aatcgtgacacgattttggcatcgtggcacgattt 159  Q
    ||||||||||||||||||||||||||| |||||||    
T  81049 aatcgtgacacgattttggcatcgtggtacgattt 81015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University