View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11880_high_7 (Length: 630)

Name: NF11880_high_7
Description: NF11880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11880_high_7
NF11880_high_7
[»] chr2 (44 HSPs)
chr2 (398-495)||(17911138-17911235)
chr2 (398-495)||(24541701-24541798)
chr2 (462-553)||(30271103-30271194)
chr2 (430-492)||(23409515-23409577)
chr2 (427-485)||(24601633-24601691)
chr2 (427-485)||(24612423-24612481)
chr2 (462-550)||(29407842-29407931)
chr2 (462-550)||(33222645-33222734)
chr2 (462-553)||(30273103-30273194)
chr2 (468-550)||(28419442-28419525)
chr2 (368-427)||(7736721-7736780)
chr2 (502-553)||(37893352-37893403)
chr2 (368-495)||(40055312-40055439)
chr2 (462-550)||(29407001-29407091)
chr2 (457-495)||(43618597-43618635)
chr2 (462-495)||(2983429-2983462)
chr2 (462-550)||(28139511-28139600)
chr2 (462-495)||(40221141-40221174)
chr2 (500-552)||(1728832-1728884)
chr2 (366-414)||(16118976-16119024)
chr2 (479-550)||(37294375-37294447)
chr2 (372-487)||(12252501-12252616)
chr2 (456-495)||(14456525-14456564)
chr2 (395-486)||(19848140-19848231)
chr2 (462-497)||(23347337-23347372)
chr2 (465-553)||(33661822-33661911)
chr2 (364-415)||(40055605-40055656)
chr2 (457-492)||(41183238-41183273)
chr2 (462-492)||(24754038-24754068)
chr2 (430-492)||(27276388-27276450)
chr2 (402-488)||(31568600-31568686)
chr2 (430-487)||(2648795-2648852)
chr2 (363-440)||(7780400-7780477)
chr2 (465-494)||(19846915-19846944)
chr2 (462-495)||(29600789-29600822)
chr2 (462-495)||(31974258-31974291)
chr2 (431-492)||(34921773-34921834)
chr2 (369-414)||(41565287-41565332)
chr2 (466-495)||(41565351-41565380)
chr2 (463-550)||(2271692-2271780)
chr2 (462-494)||(6233590-6233622)
chr2 (430-486)||(35493361-35493417)
chr2 (430-486)||(38945759-38945815)
chr2 (374-418)||(43950330-43950374)
[»] chr1 (45 HSPs)
chr1 (368-491)||(24364740-24364862)
chr1 (371-491)||(6562882-6563002)
chr1 (366-495)||(46341581-46341710)
chr1 (366-487)||(27115842-27115964)
chr1 (457-552)||(18609848-18609944)
chr1 (430-492)||(23359363-23359425)
chr1 (368-492)||(45943740-45943865)
chr1 (402-494)||(5845500-5845592)
chr1 (368-491)||(35258887-35259011)
chr1 (33-135)||(14871818-14871920)
chr1 (402-495)||(41459222-41459315)
chr1 (362-418)||(19053987-19054043)
chr1 (366-492)||(13971996-13972121)
chr1 (368-495)||(16270036-16270162)
chr1 (368-491)||(36076573-36076696)
chr1 (460-495)||(50037281-50037316)
chr1 (435-492)||(3941164-3941221)
chr1 (368-418)||(7981219-7981269)
chr1 (367-492)||(41804047-41804173)
chr1 (430-492)||(44470025-44470087)
chr1 (430-492)||(52802127-52802189)
chr1 (368-417)||(1656174-1656223)
chr1 (462-550)||(13760999-13761088)
chr1 (430-495)||(26606795-26606860)
chr1 (462-495)||(47585626-47585659)
chr1 (458-495)||(49502833-49502870)
chr1 (456-492)||(29438034-29438070)
chr1 (430-486)||(41453835-41453891)
chr1 (367-490)||(46973137-46973261)
chr1 (458-551)||(5329968-5330062)
chr1 (430-492)||(6562175-6562237)
chr1 (371-425)||(10974803-10974857)
chr1 (430-492)||(38689929-38689990)
chr1 (457-495)||(49660847-49660885)
chr1 (400-450)||(49697497-49697547)
chr1 (462-495)||(9618747-9618780)
chr1 (369-418)||(26633465-26633514)
chr1 (402-487)||(29352228-29352313)
chr1 (462-495)||(51291597-51291630)
chr1 (435-495)||(1167564-1167624)
chr1 (368-420)||(13173770-13173822)
chr1 (362-406)||(14771052-14771096)
chr1 (456-492)||(29424403-29424439)
chr1 (410-482)||(45330831-45330903)
chr1 (371-447)||(50036785-50036861)
[»] chr3 (44 HSPs)
chr3 (398-495)||(3112808-3112905)
chr3 (398-495)||(50604431-50604528)
chr3 (372-517)||(30839148-30839294)
chr3 (401-553)||(31890194-31890346)
chr3 (458-550)||(32592242-32592335)
chr3 (368-491)||(30256018-30256142)
chr3 (462-552)||(6143700-6143791)
chr3 (503-553)||(34722296-34722345)
chr3 (457-550)||(51755805-51755899)
chr3 (462-550)||(7941139-7941228)
chr3 (462-550)||(20485486-20485575)
chr3 (402-495)||(45507408-45507501)
chr3 (462-553)||(14043850-14043942)
chr3 (430-492)||(2743395-2743457)
chr3 (430-492)||(9429863-9429925)
chr3 (453-495)||(34648215-34648257)
chr3 (430-492)||(41802995-41803057)
chr3 (462-550)||(10658852-10658941)
chr3 (430-495)||(19341605-19341670)
chr3 (508-553)||(31889542-31889587)
chr3 (367-495)||(34712166-34712295)
chr3 (462-550)||(45075375-45075464)
chr3 (365-425)||(3349422-3349482)
chr3 (430-492)||(41579738-41579800)
chr3 (430-489)||(49219808-49219867)
chr3 (430-492)||(13896890-13896952)
chr3 (368-418)||(18752340-18752390)
chr3 (462-492)||(36812866-36812896)
chr3 (368-418)||(43568860-43568910)
chr3 (368-425)||(4275031-4275088)
chr3 (462-495)||(6144309-6144342)
chr3 (462-550)||(11270239-11270328)
chr3 (430-487)||(13743290-13743347)
chr3 (462-495)||(21343505-21343538)
chr3 (462-495)||(32744163-32744196)
chr3 (462-495)||(34712770-34712803)
chr3 (368-425)||(34712841-34712898)
chr3 (371-424)||(36346493-36346546)
chr3 (364-396)||(78534-78566)
chr3 (367-415)||(20374160-20374208)
chr3 (365-417)||(29929357-29929409)
chr3 (365-417)||(29978511-29978563)
chr3 (462-494)||(40798976-40799008)
chr3 (435-487)||(41137720-41137772)
[»] scaffold0341 (2 HSPs)
scaffold0341 (371-491)||(18072-18192)
scaffold0341 (430-492)||(17365-17427)
[»] chr8 (45 HSPs)
chr8 (371-492)||(40039064-40039185)
chr8 (368-495)||(38330452-38330578)
chr8 (371-491)||(40039699-40039819)
chr8 (398-489)||(26237487-26237578)
chr8 (366-495)||(28646258-28646388)
chr8 (366-495)||(28650842-28650972)
chr8 (368-550)||(7121741-7121924)
chr8 (462-550)||(13783063-13783152)
chr8 (398-491)||(27412333-27412426)
chr8 (462-553)||(3641675-3641766)
chr8 (402-474)||(38331069-38331141)
chr8 (372-550)||(13782174-13782353)
chr8 (464-550)||(34892764-34892851)
chr8 (364-418)||(5300677-5300731)
chr8 (377-494)||(32382646-32382761)
chr8 (439-512)||(32383198-32383272)
chr8 (377-494)||(32436601-32436716)
chr8 (439-512)||(32437153-32437227)
chr8 (430-492)||(44052240-44052302)
chr8 (462-550)||(40740935-40741024)
chr8 (367-427)||(41326301-41326361)
chr8 (371-480)||(35555198-35555307)
chr8 (435-492)||(38872944-38873001)
chr8 (382-492)||(21406215-21406326)
chr8 (382-492)||(21800707-21800818)
chr8 (366-418)||(40077339-40077391)
chr8 (371-418)||(5304233-5304280)
chr8 (371-414)||(32383271-32383314)
chr8 (371-414)||(32437226-32437269)
chr8 (395-486)||(33483512-33483603)
chr8 (499-550)||(38134093-38134144)
chr8 (435-486)||(38135629-38135680)
chr8 (367-481)||(4866368-4866482)
chr8 (465-550)||(16940231-16940317)
chr8 (457-495)||(39751097-39751135)
chr8 (365-418)||(7168019-7168072)
chr8 (430-487)||(20549251-20549308)
chr8 (462-495)||(31746000-31746033)
chr8 (458-550)||(39207662-39207754)
chr8 (462-495)||(43363271-43363304)
chr8 (368-440)||(4395044-4395116)
chr8 (363-407)||(5332690-5332734)
chr8 (456-492)||(7168111-7168147)
chr8 (367-486)||(35047092-35047211)
chr8 (367-419)||(35205807-35205859)
[»] chr6 (20 HSPs)
chr6 (402-495)||(31501589-31501682)
chr6 (402-495)||(31496203-31496296)
chr6 (369-415)||(26855831-26855877)
chr6 (368-491)||(18001148-18001271)
chr6 (365-492)||(32643535-32643663)
chr6 (364-495)||(30258326-30258457)
chr6 (469-550)||(15546344-15546426)
chr6 (458-495)||(17337673-17337710)
chr6 (364-492)||(23958820-23958949)
chr6 (435-491)||(28362746-28362802)
chr6 (362-425)||(3178131-3178194)
chr6 (372-451)||(35096610-35096689)
chr6 (468-550)||(35096673-35096756)
chr6 (430-492)||(13388722-13388784)
chr6 (368-418)||(17996539-17996589)
chr6 (397-447)||(32555063-32555113)
chr6 (371-407)||(6320589-6320625)
chr6 (456-492)||(9048098-9048134)
chr6 (456-492)||(9049098-9049134)
chr6 (366-418)||(13479658-13479710)
[»] chr5 (35 HSPs)
chr5 (429-553)||(30966087-30966210)
chr5 (400-475)||(4434333-4434408)
chr5 (457-550)||(42912833-42912927)
chr5 (368-495)||(13707942-13708070)
chr5 (462-553)||(30966596-30966687)
chr5 (402-495)||(27532628-27532721)
chr5 (372-536)||(30192431-30192596)
chr5 (371-493)||(42098240-42098363)
chr5 (372-414)||(512833-512875)
chr5 (499-553)||(13580623-13580677)
chr5 (499-553)||(13590589-13590643)
chr5 (457-495)||(13838435-13838473)
chr5 (368-418)||(19228735-19228785)
chr5 (368-425)||(18848094-18848151)
chr5 (368-440)||(34944223-34944296)
chr5 (430-486)||(13568095-13568151)
chr5 (429-492)||(34122520-34122583)
chr5 (368-415)||(35926297-35926344)
chr5 (456-495)||(42099093-42099132)
chr5 (458-492)||(3603162-3603196)
chr5 (430-492)||(18538349-18538411)
chr5 (442-492)||(25890003-25890053)
chr5 (435-481)||(34545687-34545733)
chr5 (426-487)||(4196575-4196635)
chr5 (372-413)||(34545175-34545216)
chr5 (435-492)||(34682259-34682316)
chr5 (462-550)||(35671111-35671200)
chr5 (430-495)||(41065881-41065946)
chr5 (514-550)||(13581615-13581651)
chr5 (514-550)||(13589666-13589702)
chr5 (435-495)||(29430024-29430084)
chr5 (435-495)||(29430589-29430649)
chr5 (466-494)||(35564303-35564331)
chr5 (435-495)||(39743159-39743219)
chr5 (437-492)||(41201732-41201787)
[»] chr7 (34 HSPs)
chr7 (369-425)||(43003940-43003996)
chr7 (402-494)||(22640679-22640771)
chr7 (368-447)||(18220015-18220094)
chr7 (367-492)||(9494820-9494946)
chr7 (366-415)||(31873333-31873382)
chr7 (463-550)||(38555368-38555456)
chr7 (370-414)||(38857040-38857084)
chr7 (368-483)||(47669542-47669658)
chr7 (367-418)||(28112775-28112826)
chr7 (368-414)||(38858015-38858061)
chr7 (371-492)||(48314611-48314732)
chr7 (430-483)||(9491405-9491458)
chr7 (462-550)||(13645297-13645386)
chr7 (462-550)||(14102303-14102392)
chr7 (462-550)||(14412320-14412409)
chr7 (499-552)||(38555131-38555184)
chr7 (435-492)||(42499411-42499468)
chr7 (499-550)||(30845992-30846043)
chr7 (368-427)||(47405504-47405563)
chr7 (457-495)||(8522147-8522185)
chr7 (368-418)||(11100536-11100586)
chr7 (464-550)||(11885990-11886076)
chr7 (371-425)||(19804679-19804733)
chr7 (430-492)||(34742409-34742471)
chr7 (365-415)||(35200853-35200903)
chr7 (371-424)||(4997292-4997345)
chr7 (462-550)||(13644450-13644539)
chr7 (367-424)||(31873904-31873960)
chr7 (462-495)||(38265474-38265507)
chr7 (435-492)||(47776334-47776391)
chr7 (462-495)||(48590350-48590383)
chr7 (462-495)||(48901453-48901486)
chr7 (430-486)||(618745-618801)
chr7 (382-430)||(7611789-7611837)
[»] chr4 (39 HSPs)
chr4 (366-486)||(17139558-17139677)
chr4 (368-482)||(72529-72643)
chr4 (367-492)||(44561344-44561470)
chr4 (368-485)||(9472792-9472910)
chr4 (371-495)||(26791586-26791711)
chr4 (368-440)||(39666084-39666156)
chr4 (463-550)||(43176583-43176671)
chr4 (402-477)||(6790233-6790308)
chr4 (368-495)||(14297081-14297207)
chr4 (368-495)||(14315330-14315456)
chr4 (456-550)||(18884459-18884554)
chr4 (371-449)||(41930517-41930595)
chr4 (406-485)||(44010537-44010616)
chr4 (430-492)||(9889991-9890053)
chr4 (430-492)||(15995719-15995781)
chr4 (430-492)||(19069184-19069246)
chr4 (430-492)||(33383802-33383864)
chr4 (369-430)||(30836626-30836687)
chr4 (462-495)||(37022072-37022105)
chr4 (402-495)||(48578167-48578260)
chr4 (393-485)||(36004297-36004389)
chr4 (462-553)||(48806514-48806606)
chr4 (393-424)||(11051489-11051520)
chr4 (453-492)||(11494563-11494602)
chr4 (414-485)||(30042458-30042529)
chr4 (371-482)||(46439586-46439697)
chr4 (368-418)||(21472573-21472623)
chr4 (368-418)||(34154491-34154541)
chr4 (462-495)||(1736102-1736135)
chr4 (429-486)||(3403843-3403900)
chr4 (462-495)||(10729432-10729465)
chr4 (462-495)||(10943201-10943234)
chr4 (462-495)||(12376014-12376047)
chr4 (368-425)||(12892501-12892558)
chr4 (367-400)||(18581402-18581435)
chr4 (462-495)||(33409552-33409585)
chr4 (462-495)||(33410240-33410273)
chr4 (462-550)||(48807341-48807430)
chr4 (366-418)||(29700391-29700443)
[»] scaffold1379 (1 HSPs)
scaffold1379 (462-551)||(389-478)
[»] scaffold0181 (1 HSPs)
scaffold0181 (367-414)||(21024-21071)
[»] scaffold0155 (1 HSPs)
scaffold0155 (430-493)||(12957-13020)
[»] scaffold0068 (1 HSPs)
scaffold0068 (367-424)||(46669-46726)
[»] scaffold0794 (1 HSPs)
scaffold0794 (457-492)||(5295-5330)
[»] scaffold0143 (1 HSPs)
scaffold0143 (395-485)||(3075-3165)
[»] scaffold0116 (1 HSPs)
scaffold0116 (430-492)||(15969-16031)
[»] scaffold0092 (1 HSPs)
scaffold0092 (462-550)||(54594-54683)
[»] scaffold0019 (1 HSPs)
scaffold0019 (462-495)||(134325-134358)


Alignment Details
Target: chr2 (Bit Score: 66; Significance: 7e-29; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 398 - 495
Target Start/End: Original strand, 17911138 - 17911235
Alignment:
Q  398 tgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||||||| ||||  |||||| |||||||||||| |||||| |||||||||||| |||||||||||||||| ||||    
T  17911138 tgaaaaacacatgtaaaatactaaaatgtccttcgacagttaactgccgaggaagtccaaaaccggctgcagttaattaccgaggaaaacctcagcag 17911235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 398 - 495
Target Start/End: Original strand, 24541701 - 24541798
Alignment:
Q  398 tgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||  |||||||||| ||||||||| |||| ||||||||||||||    
T  24541701 tgaaaaacacatgtaaaatactaaaatgtccttcggcagttaactgcagaggaagtctaaaactggcttcagttaacttccgaagaaaacctcggcag 24541798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 462 - 553
Target Start/End: Original strand, 30271103 - 30271194
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||||||||||||| | ||||||||| |||| || |  ||| |||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  30271103 ggctgcagttaactgctgaggaaaacttcggtagttaactgtcgaagaacttaaaacctgaaattaaataaggaaatacac-taagtttttcc 30271194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 23409577 - 23409515
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| ||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||    
T  23409577 tcggcagttaattgccgaggaattcaaaaactggctgcagttaactgccgaggaaaacctcgg 23409515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 427 - 485
Target Start/End: Original strand, 24601633 - 24601691
Alignment:
Q  427 cattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaa 485  Q
    |||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||    
T  24601633 cattcggtagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaa 24601691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 427 - 485
Target Start/End: Complemental strand, 24612481 - 24612423
Alignment:
Q  427 cattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaa 485  Q
    |||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||    
T  24612481 cattcggtagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaa 24612423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 29407931 - 29407842
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||||||||||| |||||||||| ||||||| |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  29407931 ggctgcagttaactaacgaggaaaacttcggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 29407842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 33222645 - 33222734
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| ||||||||||| ||||||| |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  33222645 ggctgcagttaactgccgaggaaaacttcggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 33222734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 553
Target Start/End: Complemental strand, 30273194 - 30273103
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||| ||||||||| |||||||||||||||| || |   |||||| ||||||||||||| |||||||||||||||| |||| |||||||||||    
T  30273194 ggctacagttaactgccgaggaaaacctcggtagttaattgccgaggaacttaaaacctaaaattaaataaggaaatacac-taagtttttcc 30273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 550
Target Start/End: Original strand, 28419442 - 28419525
Alignment:
Q  468 agttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||||||||| ||||||| |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  28419442 agttaactaccgaggaaaacttcggcagttaactgccgatgaatttcaaacctgaaattaaataaggaaatacacctaaatttt 28419525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 7736721 - 7736780
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtc 427  Q
    ||||||||||||| |||||| ||||| || |||||||||||||||||| || ||||||||    
T  7736721 gaaaattgttgtttacacatatgatagggctgaaaaacacatgtaaaagacaaaaatgtc 7736780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 553
Target Start/End: Complemental strand, 37893403 - 37893352
Alignment:
Q  502 ccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||| ||||||||||| |||||||||||||||||| |||| |||||||||||    
T  37893403 ccgaggaacttaaaacatgaaattaaataaggaaatacacctaagtttttcc 37893352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 368 - 495
Target Start/End: Original strand, 40055312 - 40055439
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgc 467  Q
    |||||||||||||||||||| ||  |||| ||| |||||||||||||| || ||| |  |  |||  |||||| |  |||||||    ||||| ||||||    
T  40055312 gaaaattgttgttgacacatatgcaaaggctgataaacacatgtaaaagacgaaattacccctcgacagttaactatcgaggaaaactaaaaccggctgc 40055411  T
Q  468 agttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||| |||||    
T  40055412 agttaactaccgaggaaaaccttggcag 40055439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 29407001 - 29407091
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaactt-aaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||| |||||| ||||||||||| ||||||| |  ||||||||||| || |||||||||||||||||||| ||| |||| ||| ||||    
T  29407001 ggctgcaattaactgccgaggaaaacttcggcagttaactgccgaagaatttcaaaacctgaaattaaataagtaaatacacctaaatttt 29407091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 495
Target Start/End: Original strand, 43618597 - 43618635
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  43618597 aaaccggctgcagttaactaccgaggaaaacctcggcag 43618635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 2983429 - 2983462
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||||||||||||    
T  2983429 ggctgcagttaactaccgaggaaaacctcggcag 2983462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 28139600 - 28139511
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||| |||||| ||||||||||| ||||||| |  |||| || ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  28139600 ggctgcatttaactgccgaggaaaacttcggcagttaactgctgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 28139511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 40221174 - 40221141
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||||||||||||    
T  40221174 ggctgcagttaactaccgaggaaaacctcggcag 40221141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 552
Target Start/End: Original strand, 1728832 - 1728884
Alignment:
Q  500 tgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttc 552  Q
    |||||||||| || ||||||||||||||||||||||| |||| ||| ||||||    
T  1728832 tgccgaagaatttcaaacctgaaattaaataaggaaatacacctaaatttttc 1728884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 414
Target Start/End: Original strand, 16118976 - 16119024
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaa 414  Q
    |||||||||| ||||||||||| ||||| || |||||||||||||||||    
T  16118976 tagaaaattgctgttgacacatatgatagggctgaaaaacacatgtaaa 16119024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 550
Target Start/End: Original strand, 37294375 - 37294447
Alignment:
Q  479 gaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||||| ||||||| |  ||||||||||| || ||||||||||||||||||||||| |||| ||| ||||    
T  37294375 gaggaaaacttcggcagttaactgccgaagaatttcaaacctgaaattaaataaggaaatacacctaaatttt 37294447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 12252616 - 12252501
Alignment:
Q  372 attgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaa--aactggctgcag 469  Q
    ||||||||||| |||||||||  |||||| |||||||  |||| |||| ||||||| ||||| |||||| || |||  || || ||  ||| ||||||||    
T  12252616 attgttgttgatacatttgatttggttgagaaacacaaataaattactcaaatgtccttcggcagttaactgtcga--aattttaaagaaccggctgcag 12252519  T
Q  470 ttaactaccgaggaaaac 487  Q
    |||||| |||||||||||    
T  12252518 ttaacttccgaggaaaac 12252501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 495
Target Start/End: Original strand, 14456525 - 14456564
Alignment:
Q  456 aaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  14456525 aaaaccggctgcagttaactgccgaggaaaacctcggcag 14456564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 19848231 - 19848140
Alignment:
Q  395 ggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaa 486  Q
    |||||| |||||||||||||| || ||||| |  |||| ||||||| ||||||||||    ||||| || ||||||||||||||||| ||||    
T  19848231 ggttgagaaacacatgtaaaagacaaaaatattcttcgatagttaactgccgaggaaaaataaaaccggttgcagttaactaccgagaaaaa 19848140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 497
Target Start/End: Complemental strand, 23347372 - 23347337
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct 497  Q
    ||||||||||||||||||||||||||||||| ||||    
T  23347372 ggctgcagttaactaccgaggaaaacctcggtagct 23347337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 553
Target Start/End: Original strand, 33661822 - 33661911
Alignment:
Q  465 tgcagttaactaccgaggaaaacctcggcagctgc--tgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    ||||||||| ||||||||||||| |||||| |||   |  ||| |||||||||  ||||||||||||||||||| |||| |||||||||||    
T  33661822 tgcagttaattaccgaggaaaacttcggca-ctgaattatcgaggaacttaaagtctgaaattaaataaggaaatacacctaagtttttcc 33661911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 415
Target Start/End: Complemental strand, 40055656 - 40055605
Alignment:
Q  364 attagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaa 415  Q
    |||||||||||||||||||||||| ||  |||| ||| ||||||||||||||    
T  40055656 attagaaaattgttgttgacacatatgtaaaggatgagaaacacatgtaaaa 40055605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 492
Target Start/End: Complemental strand, 41183273 - 41183238
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||||||||||||||||||||||||||||    
T  41183273 aaaccggctgcagttaactaccgaggaaaacctcgg 41183238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 492
Target Start/End: Complemental strand, 24754068 - 24754038
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||||||||||||||||||||||||||||    
T  24754068 ggctgcagttaactaccgaggaaaacctcgg 24754038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 27276450 - 27276388
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| ||| |||||| || ||| | |||||||||||||| ||||||||||||||||    
T  27276450 tcggcagttaactgctgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgg 27276388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 488
Target Start/End: Complemental strand, 31568686 - 31568600
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacc 488  Q
    |||||||||||||||||||||||  |  |||| ||||||||  |||||||    ||| | ||||||||||||||||||| |||||||    
T  31568686 aaacacatgtaaaatactaaaatacccctcggcagttaattatcgaggaaaaataaatccggctgcagttaactaccgaagaaaacc 31568600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 487
Target Start/End: Original strand, 2648795 - 2648852
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaac 487  Q
    |||| |||||| |||| ||||| |  ||||| ||||||||||||||||||||||||||    
T  2648795 tcggcagttaactgccaaggaattcaaaaaccggctgcagttaactaccgaggaaaac 2648852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 440
Target Start/End: Complemental strand, 7780477 - 7780400
Alignment:
Q  363 aattagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaa 440  Q
    |||| |||||||||||||| |||||||| |  || ||| |||||||||||||| || |||||| |  |||||||||||    
T  7780477 aattggaaaattgttgttggcacatttggtttggctgagaaacacatgtaaaagacgaaaatgcccctcggtagttaa 7780400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 19846915 - 19846944
Alignment:
Q  465 tgcagttaactaccgaggaaaacctcggca 494  Q
    ||||||||||||||||||||||||||||||    
T  19846915 tgcagttaactaccgaggaaaacctcggca 19846944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 29600789 - 29600822
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  29600789 ggctgcagttaactaccgaggaaaacttcggcag 29600822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 31974291 - 31974258
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||| ||||||||    
T  31974291 ggctgcagttaactaccgaggaaaatctcggcag 31974258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 492
Target Start/End: Complemental strand, 34921834 - 34921773
Alignment:
Q  431 cggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||||||| ||||||| || |  ||||| |||||||||||||| | ||||||||||||||    
T  34921834 cggtagttaactgccgagaaattcaaaaaccggctgcagttaactgctgaggaaaacctcgg 34921773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 414
Target Start/End: Original strand, 41565287 - 41565332
Alignment:
Q  369 aaaattgttgttgacacatttgataaggttgaaaaacacatgtaaa 414  Q
    ||||||| ||||||||||||| ||| || |||||||||||||||||    
T  41565287 aaaattgatgttgacacatttaatagggctgaaaaacacatgtaaa 41565332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 495
Target Start/End: Original strand, 41565351 - 41565380
Alignment:
Q  466 gcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||||||||    
T  41565351 gcagttaactaccgaggaaaacctcggcag 41565380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 550
Target Start/End: Complemental strand, 2271780 - 2271692
Alignment:
Q  463 gctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||  |||||||||| ||||||| |  |||||||  || || |||| ||||||||||||||||||  ||||||| ||||    
T  2271780 gctgcagttaactgtcgaggaaaacttcggcagttaactgccgagaaatttcaaacatgaaattaaataaggaaatgcacataaatttt 2271692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 494
Target Start/End: Complemental strand, 6233622 - 6233590
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggca 494  Q
    |||||||||||||||||||||||||| ||||||    
T  6233622 ggctgcagttaactaccgaggaaaacttcggca 6233590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 486
Target Start/End: Complemental strand, 35493417 - 35493361
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaa 486  Q
    ||||||||||| |||||||||| |  |||||  ||||||||||||| ||||||||||    
T  35493417 tcggtagttaactgccgaggaattcaaaaaccagctgcagttaactgccgaggaaaa 35493361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 486
Target Start/End: Original strand, 38945759 - 38945815
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaa 486  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||||    
T  38945759 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 38945815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 374 - 418
Target Start/End: Complemental strand, 43950374 - 43950330
Alignment:
Q  374 tgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    ||||||||||||||||||||||| ||| ||||||  |||||||||    
T  43950374 tgttgttgacacatttgataaggctgagaaacacgagtaaaatac 43950330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 368 - 491
Target Start/End: Complemental strand, 24364862 - 24364740
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgc 467  Q
    |||||||||||| ||||||||||| |||| |||||| ||||||||||||||||||||||  ||||| |||||| ||||||||| ||| ||||  || |||    
T  24364862 gaaaattgttgtcgacacatttgagaaggctgaaaa-cacatgtaaaatactaaaatgttcttcggcagttaactgccgaggaggtttaaaatcggttgc 24364764  T
Q  468 agttaactaccgaggaaaacctcg 491  Q
    |||||||||| |||||||||||||    
T  24364763 agttaactactgaggaaaacctcg 24364740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 491
Target Start/End: Complemental strand, 6563002 - 6562882
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagt 470  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| ||   |||| ||  |||| |||||| |||||||   ||||||||| |||||||||    
T  6563002 aattgctgttgacacatttgatagggttgaaaaacacatgtaaattatccaaatatccctcggcagttaactgccgagacggttcaaaaccggctgcagt 6562903  T
Q  471 taactaccgaggaaaacctcg 491  Q
    |||||||||| ||||||||||    
T  6562902 taactaccgaagaaaacctcg 6562882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 495
Target Start/End: Original strand, 46341581 - 46341710
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggct 465  Q
    |||||||||| ||||||||||||||||| || ||||||||  ||||||  || | |||| ||  ||| ||||||| |||||||  |||||||||  | ||    
T  46341581 tagaaaattgatgttgacacatttgatagggctgaaaaacgtatgtaagttattcaaatatccctcgatagttaactgccgagacagttcaaaatcgact 46341680  T
Q  466 gcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||| |||||||    
T  46341681 gcagttaactaccgaggaaaacttcggcag 46341710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 487
Target Start/End: Complemental strand, 27115964 - 27115842
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtc-attcggtagttaattgccgaggaagttcaaaactggc 464  Q
    |||||||||||||||||||||| ||| |||| ||| ||||||  |||||| ||  |||| || || ||| ||||||||||||||||| || ||||| |||    
T  27115964 tagaaaattgttgttgacacatatgagaaggctgagaaacaccagtaaaagacgtaaatatccatgcggcagttaattgccgaggaatttaaaaaccggc 27115865  T
Q  465 tgcagttaactaccgaggaaaac 487  Q
    ||||||||||| |||| ||||||    
T  27115864 tgcagttaactgccgaagaaaac 27115842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 18609944 - 18609848
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttc 552  Q
    |||| ||| |||||||||||||||||||||| ||||||| |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||||    
T  18609944 aaaccggcggcagttaactaccgaggaaaacttcggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttttc 18609848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 23359425 - 23359363
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| ||||||||||||||||| || ||| | |||||||||||||||||||||||||||||||    
T  23359425 tcggcagttaattgccgaggaatttgaaatccggctgcagttaactaccgaggaaaacctcgg 23359363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 492
Target Start/End: Complemental strand, 45943865 - 45943740
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtc-attcggtagttaattgccgaggaagttca-aaactggct 465  Q
    ||||||||||| ||||||||||||||||| ||| ||||||  |||||||| |||||| ||  ||  | ||||||||| ||||||| |||| |||| ||||    
T  45943865 gaaaattgttgatgacacatttgataaggctgagaaacactagtaaaatattaaaatatcttttttgcagttaattgtcgaggaa-ttcataaaccggct 45943767  T
Q  466 gcagttaactaccgaggaaaacctcgg 492  Q
    | |||||||||||||||||||| ||||    
T  45943766 gtagttaactaccgaggaaaacttcgg 45943740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 402 - 494
Target Start/End: Complemental strand, 5845592 - 5845500
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggca 494  Q
    |||||||||||||| || |||||  |  ||| ||||||| ||||||||||    ||||| |||||||||||||||||||||||||||||||||    
T  5845592 aaacacatgtaaaagacgaaaatacctctcgatagttaactgccgaggaaaaataaaaccggctgcagttaactaccgaggaaaacctcggca 5845500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 491
Target Start/End: Complemental strand, 35259011 - 35258887
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg-tcattcggtagttaattgccgaggaagttcaaaactggctg 466  Q
    |||||||| || | |||||||| |||||| ||| | ||||| |||||||||  ||||| |||||||| |||||| |||||||||| |  ||| | |||||    
T  35259011 gaaaattgctgctcacacatttcataaggctgagacacacaagtaaaatacgtaaatgctcattcggcagttaactgccgaggaattaaaaatccggctg 35258912  T
Q  467 cagttaactaccgaggaaaacctcg 491  Q
    ||||||||  |||||||||||||||    
T  35258911 cagttaacacccgaggaaaacctcg 35258887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 14871920 - 14871818
Alignment:
Q  33 gttttactctcacaaagaggattttacaatatctagcttacaccaagaacaatctatcaatgtgaagatgtatagcaatgtgttgcattctgtagatttt 132  Q
    ||||||||| |||| |||| |||||||| | |||| |||||  ||||||||||||||| | ||| |  |||||| |||||||||||| | ||||||||||    
T  14871920 gttttactcacacacagagtattttacactttctatcttaccacaagaacaatctatctaggtgtatgtgtataacaatgtgttgcactatgtagatttt 14871821  T
Q  133 ctt 135  Q
    |||    
T  14871820 ctt 14871818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 41459315 - 41459222
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||| |||||  |  |||  |||||| ||||||||||    |||||  |||||||||||||||||||||||||||||||||    
T  41459315 aaacacatgtaaaataccaaaatacccctcgacagttaactgccgaggaaaaataaaaccagctgcagttaactaccgaggaaaacctcggcag 41459222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 19053987 - 19054043
Alignment:
Q  362 aaattagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||  |||||||||    
T  19053987 aaattagaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatac 19054043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 492
Target Start/End: Original strand, 13971996 - 13972121
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg-tcattcggtagttaattgccgaggaagttcaaaactggc 464  Q
    |||| ||||||||||||||||||| |||||| ||| ||||||| |||||||||     ||  | ||||| |||| | |||||||||| || |||||||||    
T  13971996 tagagaattgttgttgacacatttcataaggctgagaaacacaagtaaaatacgtttttgccccttcggcagtt-actgccgaggaa-ttaaaaactggc 13972093  T
Q  465 tgcagttaactaccgaggaaaacctcgg 492  Q
    ||||||||||  ||||||||||||||||    
T  13972094 tgcagttaacagccgaggaaaacctcgg 13972121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 368 - 495
Target Start/End: Complemental strand, 16270162 - 16270036
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgc 467  Q
    ||||||||||||  ||||||||| | ||| ||||||||| | ||||||||| |||||  | |||| | ||||| | ||||||||  |  |||| ||||||    
T  16270162 gaaaattgttgtatacacatttgtttaggctgaaaaacataagtaaaataccaaaatacccttcgatggttaactaccgaggaaaatagaaac-ggctgc 16270064  T
Q  468 agttaactaccgaggaaaacctcggcag 495  Q
    |||||||| |||| ||||||||||||||    
T  16270063 agttaactgccgaagaaaacctcggcag 16270036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 368 - 491
Target Start/End: Complemental strand, 36076696 - 36076573
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgc 467  Q
    |||||||| ||||||||||||| |||||| ||| ||||||| |||||||||        | ||||||||||||   |||||||| |  ||||| ||||||    
T  36076696 gaaaattgctgttgacacatttcataaggctgagaaacacaagtaaaatacgttttaccccttcggtagttaaccaccgaggaattcaaaaaccggctgc 36076597  T
Q  468 agttaactaccgaggaaaacctcg 491  Q
    |||||||| |||||||||||||||    
T  36076596 agttaactgccgaggaaaacctcg 36076573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 495
Target Start/End: Complemental strand, 50037316 - 50037281
Alignment:
Q  460 ctggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||||||||||||||    
T  50037316 ctggctgcagttaactaccgaggaaaacctcggcag 50037281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 435 - 492
Target Start/End: Complemental strand, 3941221 - 3941164
Alignment:
Q  435 agttaattgccgaggaagttca-aaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||    
T  3941221 agttaactgccgaggaa-ttcataaactggctgcagttaactaccgaggaaaacttcgg 3941164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 7981269 - 7981219
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||||| ||||||||||  |||||| |||||||||    
T  7981269 gaaaattgttgttgacacatttcataaggttgaggaacacaagtaaaatac 7981219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 492
Target Start/End: Complemental strand, 41804173 - 41804047
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtca-ttcggtagttaattgccgaggaagttcaaaactggct 465  Q
    ||||||||||||||||||||||| |||||| |||   ||||| |||||||||     || |  ||||| |||||| |||||||||| |  ||||| | ||    
T  41804173 agaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgcttttgccccttcggcagttaactgccgaggaattcaaaaaccgact 41804074  T
Q  466 gcagttaactaccgaggaaaacctcgg 492  Q
    |||||||||| ||||||||||||||||    
T  41804073 gcagttaactgccgaggaaaacctcgg 41804047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 44470087 - 44470025
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||||||||||    
T  44470087 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgg 44470025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Original strand, 52802127 - 52802189
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||||||||||    
T  52802127 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgg 52802189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 417
Target Start/End: Complemental strand, 1656223 - 1656174
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaata 417  Q
    |||||||||||||||||||||| |||||||||| ||||||  ||||||||    
T  1656223 gaaaattgttgttgacacatttcataaggttgagaaacacgagtaaaata 1656174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 13761088 - 13760999
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| ||||||||||| ||| ||| |  ||||||| ||| || |||||| |||||||||||||||| |||| ||| ||||    
T  13761088 ggctgcagttaactgccgaggaaaacttcgacagttaactgccgacgaatttcaaaccttaaattaaataaggaaatacacctaaatttt 13760999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 26606795 - 26606860
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||| |||| |||||||||| | | |||||| || ||||||||||||||||||||| |||||||    
T  26606795 tcggtaattaactgccgaggaaatacgaaactgactacagttaactaccgaggaaaacttcggcag 26606860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 47585626 - 47585659
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||||||||||||    
T  47585626 ggctgcagttaactaccgaggaaaacctcggcag 47585659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 495
Target Start/End: Complemental strand, 49502870 - 49502833
Alignment:
Q  458 aactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||||||| |||||||    
T  49502870 aactggctgcagttaactaccgaggaaaacttcggcag 49502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 492
Target Start/End: Complemental strand, 29438070 - 29438034
Alignment:
Q  456 aaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||| |||||||||||||||||||||||||||||||    
T  29438070 aaaaccggctgcagttaactaccgaggaaaacctcgg 29438034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 486
Target Start/End: Original strand, 41453835 - 41453891
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaa 486  Q
    ||||||||||| |||||||||| || ||| | |||||||||||||| ||||||||||    
T  41453835 tcggtagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 41453891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 367 - 490
Target Start/End: Original strand, 46973137 - 46973261
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcat-tcggtagttaattgccgaggaagttcaaaactggct 465  Q
    ||||||||||||||||||||||| || ||| ||| | ||||| ||||||||| |   || |   | || |||||| |||||||||| |  ||||| ||||    
T  46973137 agaaaattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttgcccccttggcagttaactgccgaggaattcaaaaaccggct 46973236  T
Q  466 gcagttaactaccgaggaaaacctc 490  Q
    |||||||||| ||||||||||||||    
T  46973237 gcagttaactgccgaggaaaacctc 46973261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 551
Target Start/End: Complemental strand, 5330062 - 5329968
Alignment:
Q  458 aactggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagttttt 551  Q
    |||||||||||||||| | ||||||||||| ||| ||| |  ||| ||| ||| || |||||| |||||||||||||||| |||| ||| |||||    
T  5330062 aactggctgcagttaattgccgaggaaaacttcgacagttaactgtcgatgaatttcaaacctaaaattaaataaggaaatacacctaaattttt 5329968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 6562237 - 6562175
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||| ||||||    
T  6562237 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcgg 6562175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 10974857 - 10974803
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg 425  Q
    ||||||||||||||||| ||||| || |||||||||||| ||||| || ||||||    
T  10974857 aattgttgttgacacatatgatagggctgaaaaacacatataaaagacgaaaatg 10974803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Original strand, 38689929 - 38689990
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||||||||| || ||||||| ||| |||| |||||||||||||| || |||||||||||||    
T  38689929 tcggtagttaaatgtcgaggaa-ttcgaaaccggctgcagttaactgccaaggaaaacctcgg 38689990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 495
Target Start/End: Original strand, 49660847 - 49660885
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  49660847 aaactggctgcagttaactgccgaggaaaacttcggcag 49660885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 450
Target Start/End: Original strand, 49697497 - 49697547
Alignment:
Q  400 aaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgagga 450  Q
    |||||||||||||||||||||||||||| ||||  |||||| || ||||||    
T  49697497 aaaaacacatgtaaaatactaaaatgtctttcgacagttaactgtcgagga 49697547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 9618747 - 9618780
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  9618747 ggctgcagttaactaccgaggaaaacttcggcag 9618780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 418
Target Start/End: Original strand, 26633465 - 26633514
Alignment:
Q  369 aaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    ||||||||||||||||||||| ||||||||||   ||||| |||||||||    
T  26633465 aaaattgttgttgacacatttcataaggttgaggcacacaagtaaaatac 26633514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 487
Target Start/End: Original strand, 29352228 - 29352313
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaac 487  Q
    ||||||| ||||| |||  |||| || ||||| ||||||||| ||||||| || ||| | |||| ||||||||| |||||||||||    
T  29352228 aaacacacgtaaattacctaaatatctttcggcagttaattgtcgaggaatttgaaatccggctccagttaactgccgaggaaaac 29352313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 51291630 - 51291597
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  51291630 ggctgcagttaactaccgaggaaaacttcggcag 51291597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 1167564 - 1167624
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||| ||||||||||    ||||| | ||||||||||||| ||||||||||||||||||    
T  1167564 agttaactgccgaggaaaagtaaaaccgactgcagttaactatcgaggaaaacctcggcag 1167624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 368 - 420
Target Start/End: Original strand, 13173770 - 13173822
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatacta 420  Q
    |||||||||||||||||||||| |||||| |||   ||||| |||||||||||    
T  13173770 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacta 13173822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 362 - 406
Target Start/End: Original strand, 14771052 - 14771096
Alignment:
Q  362 aaattagaaaattgttgttgacacatttgataaggttgaaaaaca 406  Q
    ||||||| |||||||||||||||||||| | |||| |||||||||    
T  14771052 aaattaggaaattgttgttgacacattttaaaaggctgaaaaaca 14771096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 492
Target Start/End: Original strand, 29424403 - 29424439
Alignment:
Q  456 aaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  29424403 aaaaccggctgcagttaactaccgaggaaaacttcgg 29424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 410 - 482
Target Start/End: Original strand, 45330831 - 45330903
Alignment:
Q  410 gtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgagg 482  Q
    ||||||||||||||| || | || |||||||||| |||||||   | ||||  ||||||||||||||||||||    
T  45330831 gtaaaatactaaaatatcttccgatagttaattgtcgaggaaacacgaaaccagctgcagttaactaccgagg 45330903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 447
Target Start/End: Original strand, 50036785 - 50036861
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccga 447  Q
    ||||| ||||||||||||||||  || ||| ||||||| ||||| |||| |||||||  |||| |||||| ||||||    
T  50036785 aattgctgttgacacatttgatttggctgagaaacacaagtaaattactcaaatgtccctcggcagttaactgccga 50036861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 398 - 495
Target Start/End: Complemental strand, 3112905 - 3112808
Alignment:
Q  398 tgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||| ||||||| |||| || ||||||||||||| ||||    
T  3112905 tgaaaaacacatgtaaaatattaaaatgtccttcggtagttaactgccgaggaagtccaaaaccggctgcaattaattatcgaggaaaacctcagcag 3112808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 398 - 495
Target Start/End: Complemental strand, 50604528 - 50604431
Alignment:
Q  398 tgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||||  | ||| | |||||||||| |||||||| |||||   |||||||||||||||||||||||||||||||||    
T  50604528 tgaaaaacacatgtaaaatactaaaatacccttcagcagttaattgctgaggaagtccaaaatcagctgcagttaactaccgaggaaaacctcggcag 50604431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 372 - 517
Target Start/End: Complemental strand, 30839294 - 30839148
Alignment:
Q  372 attgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagtt 471  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| |||  ||||  |  |||| |||||| || ||||  |||||||||| ||||||||||    
T  30839294 attgttgttgacacgtttgatatggttaaaaaacacatgtaaattacccaaatacctctcggcagttaactgtcgagacagttcaaaaccggctgcagtt 30839195  T
Q  472 aactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaac 517  Q
    |||| || |||||||||||||||| |  |||||||||||||| ||||    
T  30839194 aactcccaaggaaaacctcggcagttaactgccgaagaacttcaaac 30839148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 401 - 553
Target Start/End: Complemental strand, 31890346 - 31890194
Alignment:
Q  401 aaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcagctg-c 499  Q
    ||||||||| ||||| || ||||| ||| | ||||||||| |||||| |||    | ||| |||||||||||  ||| ||||||||| ||||||| |  |    
T  31890346 aaaacacatataaaagacgaaaatatcacttggtagttaactgccgatgaaaaa-agaaccggctgcagttagttacagaggaaaacttcggcagttaac 31890248  T
Q  500 tgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||||| |||||||||||||||||||||||||||||  |||| |||||||||||    
T  31890247 tgccgatgaacttaaaacctgaaattaaataaggaagtacacctaagtttttcc 31890194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 550
Target Start/End: Original strand, 32592242 - 32592335
Alignment:
Q  458 aactggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||| |||||||||||| ||||||||||| ||| ||| | |||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  32592242 aactgactgcagttaactgccgaggaaaacttcgacagttagctgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 32592335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 491
Target Start/End: Complemental strand, 30256142 - 30256018
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcat-tcggtagttaattgccgaggaagttcaaaactggctg 466  Q
    |||||||||||||||||||||| |||| | |||   ||||| |||||||||  ||||| |   | ||||||||| |||||||||| |  ||||| |||||    
T  30256142 gaaaattgttgttgacacatttcataaagctgaggcacacaagtaaaatacataaatgcccccttggtagttaactgccgaggaattaaaaaaccggctg 30256043  T
Q  467 cagttaactaccgaggaaaacctcg 491  Q
    ||||||||| |||||||||||||||    
T  30256042 cagttaactgccgaggaaaacctcg 30256018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 462 - 552
Target Start/End: Original strand, 6143700 - 6143791
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttc 552  Q
    |||||||||||||| ||||||||||| ||||||| |  ||||||| ||| || ||||||||||||||||||||||  |||| ||| ||||||    
T  6143700 ggctgcagttaactgccgaggaaaacttcggcagttaactgccgaggaattttaaacctgaaattaaataaggaactacacctaaatttttc 6143791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 553
Target Start/End: Original strand, 34722296 - 34722345
Alignment:
Q  503 cgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  34722296 cgaagaacttaaaacctgaaattaaataaggaaatacac-taagtttttcc 34722345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 51755899 - 51755805
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||| ||||| |||||||| | ||||||||| ||||||| |  ||||||||||| || ||||||||||||||||||||||| |||| ||| ||||    
T  51755899 aaaccggctgaagttaactgcagaggaaaacttcggcagttaactgccgaagaatttcaaacctgaaattaaataaggaaatacacctaaatttt 51755805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 7941139 - 7941228
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| | ||||||||| ||||||| |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  7941139 ggctgcagttaactgctgaggaaaacttcggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 7941228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 20485575 - 20485486
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| ||||||||||| ||||||  |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  20485575 ggctgcagttaactgccgaggaaaacttcggcaattaactgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 20485486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 45507501 - 45507408
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||| ||||| || ||||| ||  ||| ||||||| ||||||||||    ||||  ||||||||||||||||||||||||||||||||||    
T  45507501 aaacacatataaaagacgaaaatatccctcgatagttaactgccgaggaaaaataaaatcggctgcagttaactaccgaggaaaacctcggcag 45507408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 553
Target Start/End: Complemental strand, 14043942 - 14043850
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||||||||||||| ||||||||||| ||||||| |  |||||||  || || || |||||||||||||||||||| |||  |||||||||||    
T  14043942 ggctgcagttaactgccgaggaaaacttcggcagttaactgccgagaaatttcaagcctgaaattaaataaggaaatacatctaagtttttcc 14043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Original strand, 2743395 - 2743457
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||||||||||    
T  2743395 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgg 2743457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 9429925 - 9429863
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || |||  ||||||||||||| ||||||||||||||||||    
T  9429925 tcggcagttaactgccgaggaatttgaaatttggctgcagttaagtaccgaggaaaacctcgg 9429863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 495
Target Start/End: Complemental strand, 34648257 - 34648215
Alignment:
Q  453 ttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  34648257 ttcaaaaccggctgcagttaacgaccgaggaaaacctcggcag 34648215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Original strand, 41802995 - 41803057
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||| ||| || ||||| |||||||||||||| ||||||||||||||||    
T  41802995 tcggcagttaactgccgaagaatttaaaaaccggctgcagttaactgccgaggaaaacctcgg 41803057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 10658852 - 10658941
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||| ||||| ||||||||||| | ||||| |  ||||||| ||| || ||| ||||||||||||||||||| |||| ||||||||    
T  10658852 ggctgcagctaactgccgaggaaaactttggcagttaactgccgaggaatttcaaatctgaaattaaataaggaaatacacctaagtttt 10658941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 19341670 - 19341605
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||| |||||| |||||||||| |  ||| | |||||||||||||||||||||||||| |||||||    
T  19341670 tcggcagttaactgccgaggaattagaaatccggctgcagttaactaccgaggaaaacttcggcag 19341605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 31889542 - 31889587
Alignment:
Q  508 aacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||    
T  31889542 aacttaaaacctgaaattagataaggaaatacacctaagtttttcc 31889587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 495
Target Start/End: Original strand, 34712166 - 34712295
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg-tcattcggtagttaattgccgaggaagttcaaaactggct 465  Q
    ||||||||||||| ||||||||| ||| || ||| ||||||||||||| |||| |||||  |  |||| |||||  |||| |    |||  |||| || |    
T  34712166 agaaaattgttgtcgacacatttcatagggctgagaaacacatgtaaattactcaaatgccccctcggcagttagctgccaaatttgtttgaaaccggat 34712265  T
Q  466 gcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||||||||    
T  34712266 gcagttaactaccgaggaaaacctcggcag 34712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 45075375 - 45075464
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||| |||||||| ||||||||||| | ||||| |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  45075375 ggctggagttaactgccgaggaaaactttggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 45075464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 3349422 - 3349482
Alignment:
Q  365 ttagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg 425  Q
    ||||| |||||||||| ||| || ||||| ||||||||||||||||||||| || ||||||    
T  3349422 ttagagaattgttgtttacatatatgatagggttgaaaaacacatgtaaaagacgaaaatg 3349482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 41579800 - 41579738
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaa-aactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||||||| |||||| ||||| ||| |||||||||||||| ||||||||||||||||    
T  41579800 tcggcagttaattgctgaggaa-ttcaataaccggctgcagttaactgccgaggaaaacctcgg 41579738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 489
Target Start/End: Complemental strand, 49219867 - 49219808
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacct 489  Q
    ||||||||||| |||||||||| |  ||| | |||||||||||||| |||||||||||||    
T  49219867 tcggtagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaaacct 49219808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 13896952 - 13896890
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||||||| || ||| || | ||||||||||||||||||  |||||||||||||||    
T  13896952 tcggcagttaattgctgaagaatttaataactggctgcagttaactgtcgaggaaaacctcgg 13896890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 18752390 - 18752340
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||| |  | ||||||| |||||||||||||||||    
T  18752390 gaaaattgttgttgacacatcttgttaggttgagaaacacatgtaaaatac 18752340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 492
Target Start/End: Original strand, 36812866 - 36812896
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||||||||||||||||||||||||||||    
T  36812866 ggctgcagttaactaccgaggaaaacctcgg 36812896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 43568860 - 43568910
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||||| |||||| ||| ||||||  |||||||||    
T  43568860 gaaaattgttgttgacacattttataaggctgagaaacacgagtaaaatac 43568910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 4275088 - 4275031
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg 425  Q
    ||||||||||||  ||||||||| ||||| ||| ||||||||||||| |||| |||||    
T  4275088 gaaaattgttgtatacacatttgttaaggctgagaaacacatgtaaattactcaaatg 4275031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 6144342 - 6144309
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  6144342 ggctgcagttaactaccgaggaaaacttcggcag 6144309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 11270328 - 11270239
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| || |||||||| ||||||| |  |||||||  || || |||||| |||||||||||||||| |||| ||| ||||    
T  11270328 ggctgcagttaactgccaaggaaaacttcggcagttaactgccgagaaatttcaaacctaaaattaaataaggaaatacacctaaatttt 11270239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 487
Target Start/End: Original strand, 13743290 - 13743347
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaac 487  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| |||||||||||    
T  13743290 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 13743347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 21343538 - 21343505
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  21343538 ggctgcagttaactaccgaggaaaacttcggcag 21343505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 32744196 - 32744163
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  32744196 ggctgcagttaactaccgaggaaaacttcggcag 32744163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 34712803 - 34712770
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||| |||||||||||||||||||    
T  34712803 ggctgcagttaactcccgaggaaaacctcggcag 34712770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 34712898 - 34712841
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg 425  Q
    |||||||| ||||||||||||| ||| || ||| ||||||||||||| |||| |||||    
T  34712898 gaaaattgctgttgacacatttcatagggctgagaaacacatgtaaattactcaaatg 34712841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 36346546 - 36346493
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaat 424  Q
    |||| |||||||||||| | ||| ||||||||||||||||||||| || |||||    
T  36346546 aattattgttgacacatattatagggttgaaaaacacatgtaaaagacgaaaat 36346493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 396
Target Start/End: Complemental strand, 78566 - 78534
Alignment:
Q  364 attagaaaattgttgttgacacatttgataagg 396  Q
    |||||||||||| ||||||||||||||||||||    
T  78566 attagaaaattgatgttgacacatttgataagg 78534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 367 - 415
Target Start/End: Original strand, 20374160 - 20374208
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaa 415  Q
    ||||||||| |||  ||||||||||||||  ||||||||||||||||||    
T  20374160 agaaaattgatgtatacacatttgataagactgaaaaacacatgtaaaa 20374208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 29929357 - 29929409
Alignment:
Q  365 ttagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaata 417  Q
    ||||||||||||||||||||||||| |||||| |||   ||||| ||||||||    
T  29929357 ttagaaaattgttgttgacacattttataaggctgaggcacacaagtaaaata 29929409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 29978511 - 29978563
Alignment:
Q  365 ttagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaata 417  Q
    ||||||||||||||||||||||||| |||||| |||   ||||| ||||||||    
T  29978511 ttagaaaattgttgttgacacattttataaggctgaggcacacaagtaaaata 29978563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 494
Target Start/End: Complemental strand, 40799008 - 40798976
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggca 494  Q
    |||||||||||||||||||||||||| ||||||    
T  40799008 ggctgcagttaactaccgaggaaaacttcggca 40798976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 487
Target Start/End: Original strand, 41137720 - 41137772
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaac 487  Q
    |||||| |||||||||| || ||| | |||||||||||||| |||||||||||    
T  41137720 agttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 41137772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 491
Target Start/End: Complemental strand, 18192 - 18072
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagt 470  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| ||   |||| ||  |||| |||||| |||||||   ||||||||| |||||||||    
T  18192 aattgctgttgacacatttgatagggttgaaaaacacatgtaaattatccaaatatccctcggcagttaactgccgagacggttcaaaaccggctgcagt 18093  T
Q  471 taactaccgaggaaaacctcg 491  Q
    |||||||||| ||||||||||    
T  18092 taactaccgaagaaaacctcg 18072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 17427 - 17365
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||| ||||||    
T  17427 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcgg 17365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 371 - 492
Target Start/End: Original strand, 40039064 - 40039185
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagt 470  Q
    ||||||||||||||||| ||  |||| |||||||||||||||||| || |||||  |  ||  ||||||||| |||||||||| |||||   ||||||||    
T  40039064 aattgttgttgacacatatgcaaaggctgaaaaacacatgtaaaagacgaaaatacccctcaatagttaattaccgaggaagtccaaaatcagctgcagt 40039163  T
Q  471 taactaccgaggaaaacctcgg 492  Q
    ||||||||||||||||||||||    
T  40039164 taactaccgaggaaaacctcgg 40039185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 368 - 495
Target Start/End: Original strand, 38330452 - 38330578
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgc 467  Q
    ||||| || |||||||||||||| |  |||||| ||||||||||||||||||||||||   | | | |||||| | ||||||||||  ||||| ||||||    
T  38330452 gaaaactgctgttgacacatttgttt-ggttgagaaacacatgtaaaatactaaaatgctctgctgcagttaactaccgaggaagtctaaaaccggctgc 38330550  T
Q  468 agttaactaccgaggaaaacctcggcag 495  Q
    |||||||||| |||||||||||||||||    
T  38330551 agttaactactgaggaaaacctcggcag 38330578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 371 - 491
Target Start/End: Complemental strand, 40039819 - 40039699
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagt 470  Q
    |||||||||||||| || ||  |||| ||| |||||||||||||| || |||||  | |||| ||||||| || ||||||||| |||||  | |||||||    
T  40039819 aattgttgttgacatatatgcaaaggctgataaacacatgtaaaagacaaaaatacccttcgatagttaactgtcgaggaagtccaaaatcgactgcagt 40039720  T
Q  471 taactaccgaggaaaacctcg 491  Q
    |||||||||||||||||||||    
T  40039719 taactaccgaggaaaacctcg 40039699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 26237487 - 26237578
Alignment:
Q  398 tgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacct 489  Q
    |||||||||||||||||||||||||||||| ||||  |||||| ||| |||||||| ||||||  ||||| | |||||||||| ||||||||    
T  26237487 tgaaaaacacatgtaaaatactaaaatgtccttcgacagttaactgctgaggaagtccaaaacctgctgctgataactaccgatgaaaacct 26237578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 28646388 - 28646258
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcatt-cggtagttaattgccgaggaagttcaaaactggc 464  Q
    ||||||||||||||| ||||||| ||  ||||||| ||||||| |||||| ||  |||||||  | | | ||||||||||||||||| || ||||  |||    
T  28646388 tagaaaattgttgttaacacattagaggaggttgagaaacacaagtaaaagacgtaaatgtccctgcagcagttaattgccgaggaatttaaaaatcggc 28646289  T
Q  465 tgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||| ||||||||||| |||||||    
T  28646288 tgcagttaactgccgaggaaaacttcggcag 28646258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 495
Target Start/End: Complemental strand, 28650972 - 28650842
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcatt-cggtagttaattgccgaggaagttcaaaactggc 464  Q
    ||||||||||||||| ||||||| ||  ||||||| ||||||| |||||| ||  |||||||  | | | ||||||||||||||||| || ||||  |||    
T  28650972 tagaaaattgttgttaacacattagaggaggttgagaaacacaagtaaaagacgtaaatgtccctgcagcagttaattgccgaggaatttaaaaatcggc 28650873  T
Q  465 tgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||| ||||||||||| |||||||    
T  28650872 tgcagttaactgccgaggaaaacttcggcag 28650842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 368 - 550
Target Start/End: Complemental strand, 7121924 - 7121741
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaa--actggct 465  Q
    ||||||||||||  ||||||||| ||||| ||||||||||| ||||| |||| ||||| |  |||| |||||| || |||  || || |||  || ||||    
T  7121924 gaaaattgttgtatacacatttgctaaggctgaaaaacacaagtaaattactcaaatgcctctcggcagttaactgtcga--aattttaaagaaccggct 7121827  T
Q  466 gcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||| | ||||||||| ||||||| |  ||||||| ||| || ||||||||| ||||||||||||| |||| ||| ||||    
T  7121826 gcagttaactgctgaggaaaacttcggcagttaactgccgaggaatttcaaacctgaacttaaataaggaaatacacctaaatttt 7121741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 13783152 - 13783063
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| ||||||||||| ||||||| |  ||| ||||||| || ||||||||||||||||||||||| |||| ||| ||||    
T  13783152 ggctgcagttaactgccgaggaaaacttcggcagttaactgtcgaagaatttcaaacctgaaattaaataaggaaatacacctaaatttt 13783063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 491
Target Start/End: Complemental strand, 27412426 - 27412333
Alignment:
Q  398 tgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcg 491  Q
    |||||||||||||||||||| ||||||||| ||||  || | | ||||||||||||  ||||| ||||| ||||||||  ||||||||||||||    
T  27412426 tgaaaaacacatgtaaaatattaaaatgtccttcgacagcttactgccgaggaagtctaaaaccggctgtagttaactgtcgaggaaaacctcg 27412333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 553
Target Start/End: Original strand, 3641675 - 3641766
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||||||||||||| | |||||||||||||| |  |  ||||||| ||||||||||| |||||||||||||||||| |||| |||||||||||    
T  3641675 ggctgcagttaactgctgaggaaaacctcgggaattaactgccgatgaacttaaaacttgaaattaaataaggaaatacac-taagtttttcc 3641766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 402 - 474
Target Start/End: Complemental strand, 38331141 - 38331069
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaac 474  Q
    ||||||||||||||||| |||||| | ||| | |||||| |||||||||||| |||||| |||||||||||||    
T  38331141 aaacacatgtaaaataccaaaatgcccttctgcagttaactgccgaggaagtccaaaaccggctgcagttaac 38331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 550
Target Start/End: Original strand, 13782174 - 13782353
Alignment:
Q  372 attgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaa--actggctgcag 469  Q
    |||||||||||||||||||||  || ||| ||||||  ||||| |||| |||||||  |||| |||||| |||| |  || || |||  || | |||||     
T  13782174 attgttgttgacacatttgatttggctgagaaacacgagtaaattacttaaatgtccctcggcagttaactgccaa--aattttaaagaaccgactgcaa 13782271  T
Q  470 ttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||| ||||||||||| ||||||| |  ||||||| ||| || ||||||||||||||||||||||| ||| |||| ||||    
T  13782272 ttaactgccgaggaaaacttcggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaatacaaataaatttt 13782353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 550
Target Start/End: Complemental strand, 34892851 - 34892764
Alignment:
Q  464 ctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||| ||||||||||| ||||||| |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  34892851 ctgcagttaactgccgaggaaaacttcggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 34892764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 5300677 - 5300731
Alignment:
Q  364 attagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  5300677 attagagaattgttgttgacacatttgataaggttgagaaacacgagtaaaatac 5300731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 494
Target Start/End: Original strand, 32382646 - 32382761
Alignment:
Q  377 tgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaacta 476  Q
    |||||||||||||||||  |  |||||||||||||||  || | ||||  |  |||| |||||| || ||||  |||||||||| |||||||||||||||    
T  32382646 tgttgacacatttgata--gcagaaaaacacatgtaagttattcaaatacccatcggcagttaactgtcgagacagttcaaaaccggctgcagttaacta 32382743  T
Q  477 ccgaggaaaacctcggca 494  Q
    | ||||||||||||||||    
T  32382744 ctgaggaaaacctcggca 32382761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 512
Target Start/End: Complemental strand, 32383272 - 32383198
Alignment:
Q  439 aattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaactt 512  Q
    ||||||||||  |||||||||  ||||||||||||||||||||||||||||||| || |  ||||||||||||||    
T  32383272 aattgccgagacagttcaaaatcggctgcagttaactaccgaggaaaacctcggtagttaactgccgaagaactt 32383198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 494
Target Start/End: Original strand, 32436601 - 32436716
Alignment:
Q  377 tgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaacta 476  Q
    |||||||||||||||||  |  |||||||||||||||  || | ||||  |  |||| |||||| || ||||  |||||||||| |||||||||||||||    
T  32436601 tgttgacacatttgata--gcagaaaaacacatgtaagttattcaaatacccatcggcagttaactgtcgagacagttcaaaaccggctgcagttaacta 32436698  T
Q  477 ccgaggaaaacctcggca 494  Q
    | ||||||||||||||||    
T  32436699 ctgaggaaaacctcggca 32436716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 512
Target Start/End: Complemental strand, 32437227 - 32437153
Alignment:
Q  439 aattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaactt 512  Q
    ||||||||||  |||||||||  ||||||||||||||||||||||||||||||| || |  ||||||||||||||    
T  32437227 aattgccgagacagttcaaaatcggctgcagttaactaccgaggaaaacctcggtagttaactgccgaagaactt 32437153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 44052302 - 44052240
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||||||||||||||||||| ||  || | ||||||||||| |||||||||||||||||||    
T  44052302 tcggtagttaattgccgaggaatttgcaatccggctgcagttacctaccgaggaaaacctcgg 44052240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 40740935 - 40741024
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| ||||||||||| ||||||| |  ||||||| ||  || ||||||||||||||||||||||| |||| ||| ||||    
T  40740935 ggctgcagttaactgccgaggaaaacttcggcagttaactgccgaggattttcaaacctgaaattaaataaggaaatacacctaaatttt 40741024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 41326301 - 41326361
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtc 427  Q
    ||||||||||||||||||||||| | | |||||| ||||||||||||| |||| |||||||    
T  41326301 agaaaattgttgttgacacatttcaaagggttgagaaacacatgtaaattacttaaatgtc 41326361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 35555307 - 35555198
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagt 470  Q
    ||||||||||||||||| |  | ||| ||| ||||||| ||||||||| |||||  |  ||||||||||| ||||||||||   | |||| || ||||||    
T  35555307 aattgttgttgacacatcttgttaggctgagaaacacaagtaaaataccaaaatacccctcggtagttaactgccgaggaaacacgaaaccggttgcagt 35555208  T
Q  471 taactaccga 480  Q
    ||||||||||    
T  35555207 taactaccga 35555198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 435 - 492
Target Start/End: Complemental strand, 38873001 - 38872944
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||| | |||||||| || ||||| |||||||||||||| ||||||||||||||||    
T  38873001 agttaactaccgaggaatttaaaaaccggctgcagttaactgccgaggaaaacctcgg 38872944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 492
Target Start/End: Original strand, 21406215 - 21406326
Alignment:
Q  382 acacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcat-tcggtagttaattgccgaggaagttca-aaactggctgcagttaactaccg 479  Q
    ||||||||||||||  ||| ||||||  ||||||||| ||||| ||   || | |||||| |||||||||| |||| |||| ||||||||||||||||||    
T  21406215 acacatttgataagactgagaaacactagtaaaataccaaaatatcccctctgcagttaactgccgaggaa-ttcataaaccggctgcagttaactaccg 21406313  T
Q  480 aggaaaacctcgg 492  Q
    |||||||| ||||    
T  21406314 aggaaaacttcgg 21406326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 492
Target Start/End: Original strand, 21800707 - 21800818
Alignment:
Q  382 acacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcat-tcggtagttaattgccgaggaagttca-aaactggctgcagttaactaccg 479  Q
    ||||||||||||||  ||| ||||||  ||||||||| ||||| ||   || | |||||| |||||||||| |||| |||| ||||||||||||||||||    
T  21800707 acacatttgataagactgagaaacactagtaaaataccaaaatatcccctctgcagttaactgccgaggaa-ttcataaaccggctgcagttaactaccg 21800805  T
Q  480 aggaaaacctcgg 492  Q
    |||||||| ||||    
T  21800806 aggaaaacttcgg 21800818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 40077391 - 40077339
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||| |||||||||||||||||||||||||| ||| ||||||  |||||||||    
T  40077391 tagagaattgttgttgacacatttgataaggctgagaaacacgagtaaaatac 40077339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Complemental strand, 5304280 - 5304233
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||| ||||||||||||||| ||||||||||  |||||||||    
T  5304280 aattgttgttcacacatttgataaggctgaaaaacacgagtaaaatac 5304233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 414
Target Start/End: Complemental strand, 32383314 - 32383271
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaa 414  Q
    ||||||||||||||| ||||||| || |||||||||||||||||    
T  32383314 aattgttgttgacacttttgatagggctgaaaaacacatgtaaa 32383271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 414
Target Start/End: Complemental strand, 32437269 - 32437226
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaa 414  Q
    ||||||||||||||| ||||||| || |||||||||||||||||    
T  32437269 aattgttgttgacacttttgatagggctgaaaaacacatgtaaa 32437226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 33483603 - 33483512
Alignment:
Q  395 ggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaa 486  Q
    |||||| |||||||||||||| || ||||| ||  || |||||||| |||||| |||    ||||| ||||||||||||||| |||||||||    
T  33483603 ggttgagaaacacatgtaaaagacgaaaatatccctcagtagttaactgccgaagaaaaataaaaccggctgcagttaactatcgaggaaaa 33483512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 550
Target Start/End: Complemental strand, 38134144 - 38134093
Alignment:
Q  499 ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||| ||| || ||||||||||||||||||||||| |||||||| ||||    
T  38134144 ctgccgaggaatttcaaacctgaaattaaataaggaaatacacataaatttt 38134093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 486
Target Start/End: Complemental strand, 38135680 - 38135629
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaa 486  Q
    |||||| |||||||||| ||  |||| |||||||||||||||||||||||||    
T  38135680 agttaactgccgaggaatttataaaccggctgcagttaactaccgaggaaaa 38135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 4866368 - 4866482
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctg 466  Q
    |||||||||||||| |||||| | |||||| ||| | ||||  ||||||||| ||| ||||  |||| |||||| || | || || |  ||||| |||||    
T  4866368 agaaaattgttgttcacacatatcataaggctgagacacacgagtaaaatacgaaattgtccctcggcagttaactgtcaagaaattcaaaaaccggctg 4866467  T
Q  467 cagttaactaccgag 481  Q
    |||||||||||||||    
T  4866468 cagttaactaccgag 4866482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 550
Target Start/End: Complemental strand, 16940317 - 16940231
Alignment:
Q  465 tgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||  |||||||||  ||||||| |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  16940317 tgcagttaactgtcgaggaaaatttcggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 16940231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 495
Target Start/End: Original strand, 39751097 - 39751135
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  39751097 aaaccggctgcagttaactgccgaggaaaacctcggcag 39751135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 7168019 - 7168072
Alignment:
Q  365 ttagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    ||||||||||||||||||||||||| |||||| |||   ||||| |||||||||    
T  7168019 ttagaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatac 7168072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 487
Target Start/End: Complemental strand, 20549308 - 20549251
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaac 487  Q
    |||| |||||| |||||||||| || |||   ||||||||||||||||||||||||||    
T  20549308 tcggcagttaactgccgaggaatttgaaattcggctgcagttaactaccgaggaaaac 20549251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 31746033 - 31746000
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  31746033 ggctgcagttaactaccgaggaaaacttcggcag 31746000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 550
Target Start/End: Original strand, 39207662 - 39207754
Alignment:
Q  458 aactggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||||||||| || |||||| ||| ||| |  ||||||| ||| || ||| ||||||||||||||||||| |||| ||| ||||    
T  39207662 aactggctgcagttaactac-gatgaaaacttcgacagttaactgccgaggaattttaaatctgaaattaaataaggaaatacacctaaatttt 39207754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 43363304 - 43363271
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  43363304 ggctgcagttaactaccgaggaaaacttcggcag 43363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 4395116 - 4395044
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaa 440  Q
    |||||||||||||||| |||||| |  || ||| |||||||||||||| || ||||||||  |||| ||||||    
T  4395116 gaaaattgttgttgacgcatttggtttggctgagaaacacatgtaaaagacaaaaatgtctctcggcagttaa 4395044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 5332734 - 5332690
Alignment:
Q  363 aattagaaaattgttgttgacacatttgataaggttgaaaaacac 407  Q
    ||||||||||||||||||||||||| ||| |||| ||| ||||||    
T  5332734 aattagaaaattgttgttgacacatatgagaaggctgagaaacac 5332690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 492
Target Start/End: Original strand, 7168111 - 7168147
Alignment:
Q  456 aaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  7168111 aaaaccggctgcagttaactgccgaggaaaacctcgg 7168147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 367 - 486
Target Start/End: Original strand, 35047092 - 35047211
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgt-cattcggtagttaattgccgaggaagttcaaaactggct 465  Q
    ||||||||||||||||||||| ||| |||| ||| ||||||   ||||| ||| |||||| ||| ||| | ||||||||||| ||| || ||||    ||    
T  35047092 agaaaattgttgttgacacatatgagaaggctgagaaacac-cataaaaaacttaaatgtccatgcggcaattaattgccgaagaatttaaaaatcaact 35047190  T
Q  466 gcagttaactaccgaggaaaa 486  Q
    |||||||||| ||||||||||    
T  35047191 gcagttaactgccgaggaaaa 35047211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 35205807 - 35205859
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatact 419  Q
    |||||||||||||  ||||||||| ||||| ||| ||||||||||||| ||||    
T  35205807 agaaaattgttgtatacacatttgctaaggctgataaacacatgtaaattact 35205859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 31501589 - 31501682
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||| || |||||  | |||||||||||| || |||||||  | ||||| ||||||||||| ||||||||||||||||||||||    
T  31501589 aaacacatgtaaaagacaaaaatacccttcggtagttaactgtcgaggaaaattaaaaccggctgcagttatctaccgaggaaaacctcggcag 31501682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 31496203 - 31496296
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||| || |||||  | |||||||||||| || |||||||    ||||| ||||||||||| ||||||||||||||||||||||    
T  31496203 aaacacatgtaaaagacaaaaatacccttcggtagttaactgtcgaggaaaaataaaaccggctgcagttatctaccgaggaaaacctcggcag 31496296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 26855831 - 26855877
Alignment:
Q  369 aaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaa 415  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  26855831 aaaattgttgttggcacatttgagaaggttgaaaaacacatgtaaaa 26855877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 491
Target Start/End: Original strand, 18001148 - 18001271
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcat-tcggtagttaattgccgaggaagttcaaaactggctg 466  Q
    |||||||||||||||||||||| ||||||||||   ||||| ||||||||   ||||| | | |||| |||||| ||  |||||| || ||||| |||||    
T  18001148 gaaaattgttgttgacacatttcataaggttgaggtacacaagtaaaatatgtaaatgccctatcggcagttaactgttgaggaa-ttaaaaaccggctg 18001246  T
Q  467 cagttaactaccgaggaaaacctcg 491  Q
    ||||||||| |||| ||||||||||    
T  18001247 cagttaactgccgaagaaaacctcg 18001271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 492
Target Start/End: Complemental strand, 32643663 - 32643535
Alignment:
Q  365 ttagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtc-attcggtagttaattgccgaggaagttcaaaactgg 463  Q
    |||||||||||||||| |||||||| |||||||||||   |||| |||||||||  ||||| |   |||| |||||| |||| ||||| |  ||| | ||    
T  32643663 ttagaaaattgttgttcacacatttcataaggttgaagcccacaagtaaaatacgtaaatgcctcctcggcagttaactgccaaggaattaaaaatccgg 32643564  T
Q  464 ctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||||||||||  |||||||||||||||    
T  32643563 ctgcagttaactgtcgaggaaaacctcgg 32643535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 364 - 495
Target Start/End: Complemental strand, 30258457 - 30258326
Alignment:
Q  364 attagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactgg 463  Q
    |||||||||||||||| ||||||| ||  |||||||||||||||| ||||  ||   |||| |||||||| |||||| ||| |||    |||||||   |    
T  30258457 attagaaaattgttgtcgacacatatggaaaggttgaaaaacacaagtaatttatccaaatatcattcggcagttaactgcggagtttcttcaaaatcag 30258358  T
Q  464 ctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||  ||||||||| ||||||||    
T  30258357 ctgcagttaactgtcgaggaaaatctcggcag 30258326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 550
Target Start/End: Complemental strand, 15546426 - 15546344
Alignment:
Q  469 gttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||| ||||||||||| ||||||| |  ||||||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  15546426 gttaactgccgaggaaaacttcggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 15546344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 495
Target Start/End: Original strand, 17337673 - 17337710
Alignment:
Q  458 aactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||||||| |||||||    
T  17337673 aactggctgcagttaactaccgaggaaaacttcggcag 17337710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 492
Target Start/End: Original strand, 23958820 - 23958949
Alignment:
Q  364 attagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcat-tcggtagttaattgccgaggaagttcaaaactg 462  Q
    |||||||||||||||||||||||| |||||||| ||| | || ||  ||||||||     ||||   |||| |||||| ||||||| || | |||||| |    
T  23958820 attagaaaattgttgttgacacatatgataaggctgagacacccaactaaaatacgtttttgtcccctcggcagttaactgccgagaaattccaaaaccg 23958919  T
Q  463 gctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||||||||| | ||||||||||||||||    
T  23958920 gctgcagttaaatgccgaggaaaacctcgg 23958949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 491
Target Start/End: Complemental strand, 28362802 - 28362746
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcg 491  Q
    |||||| |||||||||| || ||| | |||||||||||||| |||||||||||||||    
T  28362802 agttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcg 28362746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 425
Target Start/End: Complemental strand, 3178194 - 3178131
Alignment:
Q  362 aaattagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg 425  Q
    |||| |||||||||||||||||||||||  |  |||||| |||||||||||||| || ||||||    
T  3178194 aaatcagaaaattgttgttgacacatttagtttggttgagaaacacatgtaaaagacaaaaatg 3178131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 451
Target Start/End: Original strand, 35096610 - 35096689
Alignment:
Q  372 attgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaa 451  Q
    ||||||||| ||||||||| |  |||||| ||||||  ||||| |||| ||||| | |||||||||||| ||||||||||    
T  35096610 attgttgtttacacatttggtttggttgagaaacacgagtaaattactcaaatgcccttcggtagttaactgccgaggaa 35096689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 468 - 550
Target Start/End: Original strand, 35096673 - 35096756
Alignment:
Q  468 agttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||| ||||||||||| ||||||| |  ||||||||||| || |||||| |||||||||||| ||| |||| ||| ||||    
T  35096673 agttaactgccgaggaaaacttcggcagttaactgccgaagaatttcaaacctaaaattaaataagaaaatacacctaaatttt 35096756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 13388784 - 13388722
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||||||||| ||||||| || ||||||   ||||||||||||||  |||||||||||||||    
T  13388784 tcggtagttaactgccgagaaatttcaaattcggctgcagttaactgtcgaggaaaacctcgg 13388722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 17996539 - 17996589
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||||| ||||||| ||   |||||||||||||||    
T  17996539 gaaaattgttgttgacacattttataaggtcgaggcacacatgtaaaatac 17996589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 32555063 - 32555113
Alignment:
Q  397 ttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccga 447  Q
    |||| |||||||||||||| || ||||| ||||||||||||||| ||||||    
T  32555063 ttgagaaacacatgtaaaagacgaaaatatcattcggtagttaactgccga 32555113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 6320625 - 6320589
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacac 407  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  6320625 aattgttgttgacatatttgataaggttgagaaacac 6320589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 492
Target Start/End: Original strand, 9048098 - 9048134
Alignment:
Q  456 aaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  9048098 aaaaccggctgcagttaactaccgaggaaaacttcgg 9048134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 492
Target Start/End: Complemental strand, 9049134 - 9049098
Alignment:
Q  456 aaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  9049134 aaaaccggctgcagttaactaccgaggaaaacttcgg 9049098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 13479658 - 13479710
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||||||| |||||| |||   ||||| |||||||||    
T  13479658 tagaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatac 13479710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 429 - 553
Target Start/End: Original strand, 30966087 - 30966210
Alignment:
Q  429 ttcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggc-agctgctgccgaagaacttaaaacctgaaattaa 527  Q
    |||||||||||| ||||||||||  | | ||| ||||| |||||||| ||||||||||| || |  | |||| ||||| |||||||||||||||||||||    
T  30966087 ttcggtagttaactgccgaggaaaat-ataaccggctgtagttaactcccgaggaaaacttcagttaactgc-gccgaggaacttaaaacctgaaattaa 30966184  T
Q  528 ataaggaaacacacataagtttttcc 553  Q
    ||||||||| |||| |||||||||||    
T  30966185 ataaggaaatacacctaagtttttcc 30966210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 475
Target Start/End: Complemental strand, 4434408 - 4434333
Alignment:
Q  400 aaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaact 475  Q
    |||||||||||||||||||||||||| | || |  |||||| |||||||||||| |||||| ||||||||||||||    
T  4434408 aaaaacacatgtaaaatactaaaatgccctttgacagttaactgccgaggaagtccaaaaccggctgcagttaact 4434333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 42912927 - 42912833
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||| ||| |||||||||||||||||||||| ||||||| |  ||||||||||| || |||||||||| |||||||||||| |||| ||| ||||    
T  42912927 aaaccggcggcagttaactaccgaggaaaacttcggcagttaactgccgaagaatttcaaacctgaaactaaataaggaaatacacctaaatttt 42912833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 368 - 495
Target Start/End: Complemental strand, 13708070 - 13707942
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcatt-cggtagttaattgccgaggaagttcaaaactggctg 466  Q
    ||||||||||||| |||||| | ||| || ||| ||||||  |||||||||||||||   ||| | | |||||| ||||||||||    |||| ||||||    
T  13708070 gaaaattgttgttcacacatgttatagggctgagaaacaccagtaaaatactaaaatactatttctgcagttaactgccgaggaaaaataaaagtggctg 13707971  T
Q  467 cagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||| |||||||    
T  13707970 cagttaactaccgaggaaaacatcggcag 13707942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 462 - 553
Target Start/End: Complemental strand, 30966687 - 30966596
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||||||| ||||||| ||||||||| ||||||| |  ||||||| ||||||||||||| |||||||||||| ||| |||| |||||||||||    
T  30966687 ggctgcagctaactac-gaggaaaacttcggcagttaactgccgaggaacttaaaaccttaaattaaataagaaaatacacctaagtttttcc 30966596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 27532721 - 27532628
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||| |||||  |  |||  |||||| ||||||||||    ||||||| ||||||||||||| ||||||||||||||||||    
T  27532721 aaacacatgtaaaataccaaaatacccctcgacagttaactgccgaggaaaaataaaactgactgcagttaactatcgaggaaaacctcggcag 27532628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 536
Target Start/End: Original strand, 30192431 - 30192596
Alignment:
Q  372 attgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaa--actggctgcag 469  Q
    |||| ||||||||||||||||  |  ||| ||||||  ||||| |||| ||||| | ||||| |||||| ||||||  || || |||  || ||||||||    
T  30192431 attgctgttgacacatttgatttgactgagaaacacgagtaaattactcaaatgcccttcggcagttaactgccga--aattttaaagaaccggctgcag 30192528  T
Q  470 ttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaa 536  Q
    ||||||  |||||||||| ||||||| |  ||||||| ||| || |||||||||||||||||||||||    
T  30192529 ttaactgtcgaggaaaacttcggcagttaactgccgaggaatttcaaacctgaaattaaataaggaaa 30192596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 493
Target Start/End: Original strand, 42098240 - 42098363
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcat-tcggtagttaattgccgaggaagttcaaaactggctgcag 469  Q
    ||||| |||| |||||| | |||||| ||| |||||   ||||||||| ||||| || | || | |||||| ||||||||||    ||||||||||||||    
T  42098240 aattgctgtttacacatgttataaggctgagaaacatcagtaaaataccaaaatatcctctctgcagttaactgccgaggaaaaataaaactggctgcag 42098339  T
Q  470 ttaactaccgaggaaaacctcggc 493  Q
    |||||| |||||||||||||||||    
T  42098340 ttaactgccgaggaaaacctcggc 42098363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 512875 - 512833
Alignment:
Q  372 attgttgttgacacatttgataaggttgaaaaacacatgtaaa 414  Q
    ||||||||||||||||||||||||||||| ||||||| |||||    
T  512875 attgttgttgacacatttgataaggttgataaacacaagtaaa 512833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 553
Target Start/End: Original strand, 13580623 - 13580677
Alignment:
Q  499 ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||||| | |||||||||||||||||||||||| |||| |||| |||||||||||    
T  13580623 ctgccgcaaaacttaaaacctgaaattaaataaagaaatacacgtaagtttttcc 13580677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 553
Target Start/End: Complemental strand, 13590643 - 13590589
Alignment:
Q  499 ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||||| ||||||||||||||||||||||||||  ||| |||| |||||||||||    
T  13590643 ctgccgcagaacttaaaacctgaaattaaataaataaatacacgtaagtttttcc 13590589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 495
Target Start/End: Complemental strand, 13838473 - 13838435
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  13838473 aaaccggctgcagttaactaccgaggaaaacctcggcag 13838435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 19228785 - 19228735
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    ||||||||||||||||||||||||||||| ||| | ||||| |||||||||    
T  19228785 gaaaattgttgttgacacatttgataaggctgagacacacaagtaaaatac 19228735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 18848151 - 18848094
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg 425  Q
    ||||||| |||||||||||| ||||| || |||||||||||||||||| || ||||||    
T  18848151 gaaaattattgttgacacatatgatagggctgaaaaacacatgtaaaagacgaaaatg 18848094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 368 - 440
Target Start/End: Complemental strand, 34944296 - 34944223
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgt-cattcggtagttaa 440  Q
    ||||||||||||| ||||||||||||||| ||||| |||||| ||||| || ||||| | | ||||||||||||    
T  34944296 gaaaattgttgttaacacatttgataaggctgaaacacacatataaaagacgaaaatatcccttcggtagttaa 34944223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 430 - 486
Target Start/End: Complemental strand, 13568151 - 13568095
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaa 486  Q
    ||||||||||| |||||||||| || ||| | |||||||||||||| ||||||||||    
T  13568151 tcggtagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 13568095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 34122520 - 34122583
Alignment:
Q  429 ttcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||| |||||| |||||||||| || ||| | |||||||||||||| |||||||||| |||||    
T  34122520 ttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaagctcgg 34122583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 415
Target Start/End: Original strand, 35926297 - 35926344
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaa 415  Q
    ||||| ||||||| ||||||||||||||| ||||||||| ||||||||    
T  35926297 gaaaactgttgttcacacatttgataaggctgaaaaacatatgtaaaa 35926344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 495
Target Start/End: Complemental strand, 42099132 - 42099093
Alignment:
Q  456 aaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  42099132 aaaactggctgtagttaactatcgaggaaaacctcggcag 42099093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 458 - 492
Target Start/End: Complemental strand, 3603196 - 3603162
Alignment:
Q  458 aactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||||||||||||||| ||||||||||||||||    
T  3603196 aactggctgcagttaacttccgaggaaaacctcgg 3603162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 18538411 - 18538349
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| ||||||||| ||||||| |  ||||| |||||||||||||| ||||||||||| ||||    
T  18538411 tcggcagttaattgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaacttcgg 18538349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 442 - 492
Target Start/End: Original strand, 25890003 - 25890053
Alignment:
Q  442 tgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||||||| || ||| | | |||||||||||||||||||||||||||||    
T  25890003 tgccgaggaatttgaaatccgactgcagttaactaccgaggaaaacctcgg 25890053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 435 - 481
Target Start/End: Complemental strand, 34545733 - 34545687
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgag 481  Q
    |||||| |||||||  |||||||||| ||||||||||||||||||||    
T  34545733 agttaactgccgagacagttcaaaaccggctgcagttaactaccgag 34545687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 487
Target Start/End: Original strand, 4196575 - 4196635
Alignment:
Q  426 tcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaac 487  Q
    ||||||||||||||| |||||||||| || ||||  ||||||| |||||| |||||||||||    
T  4196575 tcattcggtagttaagtgccgaggaa-tttaaaatcggctgcaattaactgccgaggaaaac 4196635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 413
Target Start/End: Original strand, 34545175 - 34545216
Alignment:
Q  372 attgttgttgacacatttgataaggttgaaaaacacatgtaa 413  Q
    |||| ||||||||||||||||| || ||||||||||||||||    
T  34545175 attgctgttgacacatttgatagggctgaaaaacacatgtaa 34545216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 492
Target Start/End: Original strand, 34682259 - 34682316
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||| || ||||||| |  ||||| |||||||||||||| ||||||||||||||||    
T  34682259 agttaactgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaacctcgg 34682316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 35671111 - 35671200
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| ||||||||||| | ||||| |  ||||||| ||| || |||| |||| ||||||||||||| |||| ||| ||||    
T  35671111 ggctgcagttaactgccgaggaaaactttggcagttaactgccgaggaatttcaaacatgaacttaaataaggaaatacacctaaatttt 35671200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 495
Target Start/End: Original strand, 41065881 - 41065946
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||| |||||||||| | | |||  | |||||||||||| ||||||||||| |||||||    
T  41065881 tcggtagttaactgccgaggaaatacgaaatcgactgcagttaacttccgaggaaaacttcggcag 41065946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 550
Target Start/End: Complemental strand, 13581651 - 13581615
Alignment:
Q  514 aaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  13581651 aaacctgaaattaaataagaaaacacacctaagtttt 13581615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 514 - 550
Target Start/End: Original strand, 13589666 - 13589702
Alignment:
Q  514 aaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  13589666 aaacctgaaattaaataagaaaacacacctaagtttt 13589702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 29430024 - 29430084
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||| ||||||||||    ||||| |||||||||||| | |||||||||||||||||||    
T  29430024 agttaactgccgaggaaaaataaaaccggctgcagttaagtgccgaggaaaacctcggcag 29430084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 495
Target Start/End: Complemental strand, 29430649 - 29430589
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||| ||||||||||    ||||| |||||||||||||| | |||||||||||||||||    
T  29430649 agttaactgccgaggaaaaataaaaccggctgcagttaactgctgaggaaaacctcggcag 29430589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 466 - 494
Target Start/End: Complemental strand, 35564331 - 35564303
Alignment:
Q  466 gcagttaactaccgaggaaaacctcggca 494  Q
    |||||||||||||||||||||||||||||    
T  35564331 gcagttaactaccgaggaaaacctcggca 35564303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 495
Target Start/End: Complemental strand, 39743219 - 39743159
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||| |||||||||| || |||   | |||||||||||| |||||||||||||||||||    
T  39743219 agttaactgccgaggaatttgaaattcgactgcagttaactgccgaggaaaacctcggcag 39743159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 437 - 492
Target Start/End: Original strand, 41201732 - 41201787
Alignment:
Q  437 ttaattgccgaggaagttcaa-aactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||||| ||||||| ||||| ||| |||||||||||||| ||||||||||||||||    
T  41201732 ttaattgtcgaggaa-ttcaataaccggctgcagttaactgccgaggaaaacctcgg 41201787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 369 - 425
Target Start/End: Original strand, 43003940 - 43003996
Alignment:
Q  369 aaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg 425  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  43003940 aaaattattgttgacacatttgagaaggctgaaaaacacatgtaaaatactaaaatg 43003996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 402 - 494
Target Start/End: Complemental strand, 22640771 - 22640679
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggca 494  Q
    |||||||| |||||||| |||||  |  || |||||||| || ||||||||||||||||   |||||||||||||||||| ||||||||||||    
T  22640771 aaacacatataaaatacgaaaatacctctctgtagttaactgtcgaggaagttcaaaaccaactgcagttaactaccgagaaaaacctcggca 22640679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 447
Target Start/End: Complemental strand, 18220094 - 18220015
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccga 447  Q
    ||||||||||||  ||||||||| | ||| ||||||||||||||||| |||| |||||||  |||| |||||||||||||    
T  18220094 gaaaattgttgtatacacatttgcttaggctgaaaaacacatgtaaattacttaaatgtctctcggcagttaattgccga 18220015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 367 - 492
Target Start/End: Complemental strand, 9494946 - 9494820
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcat-tcggtagttaattgccgaggaagttcaaaactggct 465  Q
    ||||||||||||||||||||||| |||||| |||   ||||| ||||||||   | ||| |   |||| |||||| |||||||||| |  ||||| ||||    
T  9494946 agaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaataggtatatgccccctcggcagttaactgccgaggaattaaaaaaccggct 9494847  T
Q  466 gcagttaactaccgaggaaaacctcgg 492  Q
    |||||||||| ||||||||||||||||    
T  9494846 gcagttaactgccgaggaaaacctcgg 9494820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 415
Target Start/End: Original strand, 31873333 - 31873382
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaa 415  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||||||    
T  31873333 tagagaattgttgttgacacatatgataaggctgaaaaacacatgtaaaa 31873382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 550
Target Start/End: Complemental strand, 38555456 - 38555368
Alignment:
Q  463 gctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||||||||| ||||||||||| ||||||| |  |||||||| || || |||||| |||||||||||||||| |||| ||| ||||    
T  38555456 gctgcagttaactgccgaggaaaacttcggcagttaactgccgaaaaatttcaaacctaaaattaaataaggaaatacacctaaatttt 38555368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 414
Target Start/End: Original strand, 38857040 - 38857084
Alignment:
Q  370 aaattgttgttgacacatttgataaggttgaaaaacacatgtaaa 414  Q
    |||||||||||||||||||||||| || |||||||||||||||||    
T  38857040 aaattgttgttgacacatttgatagggctgaaaaacacatgtaaa 38857084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 483
Target Start/End: Original strand, 47669542 - 47669658
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtca-ttcggtagttaattgccgaggaagttcaaaactggctg 466  Q
    ||||||||||||||||||||||  | ||| ||| ||||||  ||||||||| |||||  |  |||||||||||| |||||||||| | | |||  |||||    
T  47669542 gaaaattgttgttgacacattttgttaggctgagaaacacgagtaaaataccaaaataccccttcggtagttaactgccgaggaaatacgaaatcggctg 47669641  T
Q  467 cagttaactaccgagga 483  Q
     ||||||||||||||||    
T  47669642 tagttaactaccgagga 47669658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 28112775 - 28112826
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    ||||||||||||||||||||||| |||||||||| | ||||| |||||||||    
T  28112775 agaaaattgttgttgacacatttcataaggttgagacacacaagtaaaatac 28112826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 414
Target Start/End: Complemental strand, 38858061 - 38858015
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaa 414  Q
    |||||||| ||||||||||||||||| || |||||||||||||||||    
T  38858061 gaaaattgatgttgacacatttgatagggctgaaaaacacatgtaaa 38858015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 492
Target Start/End: Original strand, 48314611 - 48314732
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaa-aactggctgcag 469  Q
    ||||||||||||||||||  ||||||||||   ||||| |||||||||     || |  |||| |||||| |||||||||| ||||| ||| ||||||||    
T  48314611 aattgttgttgacacattgcataaggttgaggtacacaagtaaaatacatttttgcccctcggcagttaactgccgaggaa-ttcaataaccggctgcag 48314709  T
Q  470 ttaactaccgaggaaaacctcgg 492  Q
    ||||||||||| |||||||||||    
T  48314710 ttaactaccgacgaaaacctcgg 48314732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 430 - 483
Target Start/End: Original strand, 9491405 - 9491458
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgagga 483  Q
    ||||||||||| |||||||||| | | |||| ||||||||||||||||||||||    
T  9491405 tcggtagttaactgccgaggaaatacgaaaccggctgcagttaactaccgagga 9491458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 13645386 - 13645297
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| ||||||||||| | ||||| |  ||||||| ||| || ||| ||||||||||||||||||| |||| ||| ||||    
T  13645386 ggctgcagttaactgccgaggaaaacttaggcagttaactgccgaggaattttaaatctgaaattaaataaggaaatacacctaaatttt 13645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 14102392 - 14102303
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||| |||||| ||||||||||| ||||||| |  ||||||| ||| || |||| |||||||||||||||||| |||| ||| ||||    
T  14102392 ggctgcaattaactgccgaggaaaacttcggcagttaactgccgaggaatttcaaacatgaaattaaataaggaaatacacctaaatttt 14102303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 14412409 - 14412320
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||| |||||| ||||||||||| ||||||| |  ||||||| ||| || |||| |||||||||||||||||| |||| ||| ||||    
T  14412409 ggctgcaattaactgccgaggaaaacttcggcagttaactgccgaggaatttcaaacttgaaattaaataaggaaatacacctaaatttt 14412320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 552
Target Start/End: Original strand, 38555131 - 38555184
Alignment:
Q  499 ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttc 552  Q
    ||||||||||| || ||||||||||||||||||||||| |||| ||| ||||||    
T  38555131 ctgccgaagaatttcaaacctgaaattaaataaggaaatacacctaaatttttc 38555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 435 - 492
Target Start/End: Original strand, 42499411 - 42499468
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    ||||||||||||||||| || ||| | | |||||||||||| ||||||||||||||||    
T  42499411 agttaattgccgaggaatttgaaatccgactgcagttaactgccgaggaaaacctcgg 42499468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 550
Target Start/End: Original strand, 30845992 - 30846043
Alignment:
Q  499 ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||| ||| || ||||||||||||||||||||||| |||||||| ||||    
T  30845992 ctgccgaggaatttcaaacctgaaattaaataaggaaatacacataaatttt 30846043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 47405563 - 47405504
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtc 427  Q
    ||||||||||||  || ||| | ||||||||||||||||||||||||| || ||||||||    
T  47405563 gaaaattgttgtatacgcatgttataaggttgaaaaacacatgtaaaagacgaaaatgtc 47405504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 495
Target Start/End: Complemental strand, 8522185 - 8522147
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  8522185 aaactggctgtagttaactcccgaggaaaacctcggcag 8522147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 11100586 - 11100536
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||||| ||||||| ||   |||||||||||||||    
T  11100586 gaaaattgttgttgacacattttataaggtcgaggcacacatgtaaaatac 11100536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 550
Target Start/End: Original strand, 11885990 - 11886076
Alignment:
Q  464 ctgcagttaactaccgaggaaaacctcggcagctgctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||| ||||||||||| ||||||    ||| ||| ||| || ||||||||||||||||||| ||| |||| ||| ||||    
T  11885990 ctgcagttaactgccgaggaaaacttcggcattaactgtcgaggaatttcaaacctgaaattaaataagaaaatacacctaaatttt 11886076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 425
Target Start/End: Complemental strand, 19804733 - 19804679
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg 425  Q
    ||||||||||||||||| ||||| |  |||||||||||||||||| || ||||||    
T  19804733 aattgttgttgacacatgtgataggactgaaaaacacatgtaaaagacgaaaatg 19804679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 34742471 - 34742409
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| ||||||||| ||||||| |  ||| ||| |||||||||||| ||||||||||||||||    
T  34742471 tcggcagttaattgtcgaggaattagaaatctgactgcagttaactgccgaggaaaacctcgg 34742409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 415
Target Start/End: Complemental strand, 35200903 - 35200853
Alignment:
Q  365 ttagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaa 415  Q
    ||||| |||||||||| |||||| ||||| || ||||||||||||||||||    
T  35200903 ttagagaattgttgtttacacatatgatagggctgaaaaacacatgtaaaa 35200853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 424
Target Start/End: Original strand, 4997292 - 4997345
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaat 424  Q
    ||||| |||| |||||| ||||| ||||||||||||||||||||| || |||||    
T  4997292 aattgctgtttacacatatgatagggttgaaaaacacatgtaaaagacgaaaat 4997345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 13644450 - 13644539
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||| | ||||||||||| ||||||| |  | ||| ||||| || ||| ||||||||||||||||||| |||| ||| ||||    
T  13644450 ggctgcagttaaatgccgaggaaaacttcggcagttaaccgccaaagaatttcaaatctgaaattaaataaggaaatacacctaaatttt 13644539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 31873960 - 31873904
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaat 424  Q
    ||||||||||||||||||||| ||||| || || ||||||||||||||| || |||||    
T  31873960 agaaaattgttgttgacacatatgatagggctg-aaaacacatgtaaaagacgaaaat 31873904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 38265474 - 38265507
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||| |||||||||||||||||    
T  38265474 ggctgcagttaactactgaggaaaacctcggcag 38265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 492
Target Start/End: Original strand, 47776334 - 47776391
Alignment:
Q  435 agttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||| ||||||| || |  ||| |||||||||||||||| ||||||||||||||||    
T  47776334 agttaactgccgagaaattaaaaatctggctgcagttaactgccgaggaaaacctcgg 47776391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 48590383 - 48590350
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||| ||||||||    
T  48590383 ggctgcagttaactaccgaggaaaatctcggcag 48590350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 48901486 - 48901453
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  48901486 ggctgcagttaactaccgaggaaaacttcggcag 48901453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 486
Target Start/End: Complemental strand, 618801 - 618745
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaa 486  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||||    
T  618801 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 618745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 7611837 - 7611789
Alignment:
Q  382 acacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcatt 430  Q
    ||||||||||||||| ||| ||||||  ||||||||||||||| |||||    
T  7611837 acacatttgataaggctgagaaacactagtaaaatactaaaatatcatt 7611789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 3e-16; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 366 - 486
Target Start/End: Original strand, 17139558 - 17139677
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggct 465  Q
    ||||||||||||||| |||||| | |||||||||| ||||||||||||||||| ||| ||||  |||| |||||| || ||| ||| |  ||||| ||||    
T  17139558 tagaaaattgttgttcacacatatcataaggttgagaaacacatgtaaaatacgaaattgtccctcggcagttaactgtcga-gaaataaaaaaccggct 17139656  T
Q  466 gcagttaactaccgaggaaaa 486  Q
    |||||||||| ||||| ||||    
T  17139657 gcagttaactgccgagaaaaa 17139677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 368 - 482
Target Start/End: Complemental strand, 72643 - 72529
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgc 467  Q
    |||||||||||||||||||| |  | ||| ||| ||||||  ||||||||| |||||  |||||||||||||| |||||||||| |   |||| | ||||    
T  72643 gaaaattgttgttgacacatctttttaggctgagaaacacgagtaaaataccaaaataccattcggtagttaactgccgaggaaatatgaaaccgtctgc 72544  T
Q  468 agttaactaccgagg 482  Q
    |||||||||||||||    
T  72543 agttaactaccgagg 72529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 492
Target Start/End: Complemental strand, 44561470 - 44561344
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcat-tcggtagttaattgccgaggaagttcaaaactggct 465  Q
    ||||||||||||||||||||||| |||||| ||| ||||||  ||||||||| |   || | | ||||| ||||| ||||||| || |  ||||| ||||    
T  44561470 agaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgattttgccctctcggttgttaactgccgagtaaataaaaaaccggct 44561371  T
Q  466 gcagttaactaccgaggaaaacctcgg 492  Q
    ||||||||||||||||||||| |||||    
T  44561370 gcagttaactaccgaggaaaatctcgg 44561344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 485
Target Start/End: Original strand, 9472792 - 9472910
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaat-gtcattcggtagttaattgccgaggaagttca-aaactggct 465  Q
    |||||||| || ||||||||||||||||| ||| ||||||  |||||||||||||||   |  || | |||||| ||| |||||| |||| |||||||||    
T  9472792 gaaaattgctgatgacacatttgataaggctgagaaacactagtaaaatactaaaataccccctctgcagttaactgctgaggaa-ttcataaactggct 9472890  T
Q  466 gcagttaactaccgaggaaa 485  Q
    ||||||||||||||||||||    
T  9472891 gcagttaactaccgaggaaa 9472910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 495
Target Start/End: Original strand, 26791586 - 26791711
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttca-aaactggctgcag 469  Q
    ||||| |||| |||||| ||| |||| ||| |||||||||||||| || |||||  | |||||||||||| |||||| |||      |||| ||||||||    
T  26791586 aattgctgtttacacatatgagaaggctgagaaacacatgtaaaagacgaaaatacccttcggtagttaactgccgaagaaaaagggaaaccggctgcag 26791685  T
Q  470 ttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||| |||||||||||||    
T  26791686 ttaactaccgagaaaaacctcggcag 26791711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 39666084 - 39666156
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaa 440  Q
    ||||| ||||||  |||||| | ||||||||||||||||||||||||| || |||||||||| ||| ||||||    
T  39666084 gaaaagtgttgtatacacatgttataaggttgaaaaacacatgtaaaaaacgaaaatgtcatgcggcagttaa 39666156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 550
Target Start/End: Complemental strand, 43176671 - 43176583
Alignment:
Q  463 gctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||||||||||| ||||||||||| ||||||| |  || |||| ||| || ||||||||||||||||||||||| |||| ||| ||||    
T  43176671 gctgcagttaactgccgaggaaaacttcggcagttaactaccgaggaatttcaaacctgaaattaaataaggaaatacacctaaatttt 43176583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 477
Target Start/End: Original strand, 6790233 - 6790308
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactac 477  Q
    |||||||||||||||||||||||  | ||||| |||||| ||||||||||    ||||| ||||||||||||||||    
T  6790233 aaacacatgtaaaatactaaaatacccttcggcagttaactgccgaggaaaaataaaaccggctgcagttaactac 6790308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 368 - 495
Target Start/End: Original strand, 14297081 - 14297207
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgc 467  Q
    |||||||||||||||||||| |  | ||| | | ||||||| |||||| ||  |||||    ||||||||||| ||||||| ||  | ||| ||||||||    
T  14297081 gaaaattgttgttgacacatcttgttaggcttagaaacacaagtaaaagacgtaaatgctcctcggtagttaagtgccgagaaaaatgaaa-ctggctgc 14297179  T
Q  468 agttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||| ||||    
T  14297180 agttaactaccgaggaaaacctccgcag 14297207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 368 - 495
Target Start/End: Original strand, 14315330 - 14315456
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgc 467  Q
    |||||||||||||||||||| |  | ||| | | ||||||| |||||| ||  |||||    ||||||||||| ||||||| ||  | ||| ||||||||    
T  14315330 gaaaattgttgttgacacatcttgttaggcttagaaacacaagtaaaagacgtaaatgctcctcggtagttaagtgccgagaaaaatgaaa-ctggctgc 14315428  T
Q  468 agttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||| ||||    
T  14315429 agttaactaccgaggaaaacctccgcag 14315456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 550
Target Start/End: Complemental strand, 18884554 - 18884459
Alignment:
Q  456 aaaactggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    ||||| |||||||||||||| ||||| ||||| ||||||| |  ||||||| ||| || |||||| |||||||||||||||| |||| ||| ||||    
T  18884554 aaaaccggctgcagttaactgccgagaaaaacttcggcagttaactgccgaggaatttcaaacctaaaattaaataaggaaatacacctaaatttt 18884459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 449
Target Start/End: Original strand, 41930517 - 41930595
Alignment:
Q  371 aattgttgttgacacat-ttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgagg 449  Q
    ||||||||||||||||| |||||| | || | ||||||| |||||||||  ||||||| |||||||||||||||||||||    
T  41930517 aattgttgttgacacatcttgataggctt-agaaacacaagtaaaatacgtaaatgtccttcggtagttaattgccgagg 41930595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 44010537 - 44010616
Alignment:
Q  406 acatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaa 485  Q
    ||||||||||||| ||||| |   ||||||||||| || || ||||||| ||||| | ||||||||||||||||||||||    
T  44010537 acatgtaaaatacgaaaatatttctcggtagttaactgtcgtggaagtttaaaaccgactgcagttaactaccgaggaaa 44010616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Original strand, 9889991 - 9890053
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||||||||||    
T  9889991 tcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgg 9890053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Original strand, 15995719 - 15995781
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||||||||||    
T  15995719 tcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgg 15995781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Original strand, 19069184 - 19069246
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||||||||||    
T  19069184 tcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgg 19069246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Original strand, 33383802 - 33383864
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||||||||||| ||||||  || ||||| | |||||||||||| ||||||||||||||||    
T  33383802 tcggtagttaattgtcgaggattttaaaaaccgactgcagttaactgccgaggaaaacctcgg 33383864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 30836626 - 30836687
Alignment:
Q  369 aaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcatt 430  Q
    ||||||| ||||||||| | ||||| || |||||||||||||||||| || |||||||||||    
T  30836626 aaaattgctgttgacacgtatgatagggctgaaaaacacatgtaaaagacgaaaatgtcatt 30836687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 37022105 - 37022072
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||||||||||||    
T  37022105 ggctgcagttaactaccgaggaaaacctcggcag 37022072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 48578260 - 48578167
Alignment:
Q  402 aaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||| || |||||  |  ||||||||||| ||||||| ||    ||||| ||||||||||||||||||| ||||||||| ||||    
T  48578260 aaacacatgtaaaagacgaaaatacctctcggtagttaagtgccgagaaaaaataaaaccggctgcagttaactaccgaagaaaacctcagcag 48578167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 36004389 - 36004297
Alignment:
Q  393 aaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaa 485  Q
    ||||||||||||||||||||||| || |||||| |||| || |||||| || ||||||| ||  |||| | ||| ||||||||  ||||||||    
T  36004389 aaggttgaaaaacacatgtaaaagaccaaaatgccatttggcagttaactgtcgaggaatttataaaccgactgtagttaactgtcgaggaaa 36004297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 553
Target Start/End: Original strand, 48806514 - 48806606
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttttcc 553  Q
    |||||||||||||| ||||||||||  || |||| |  ||||||| ||| || ||||||||||||||||||| ||| |||| ||| |||||||    
T  48806514 ggctgcagttaactgccgaggaaaatttcagcagttaactgccgaggaatttcaaacctgaaattaaataagaaaatacacctaaatttttcc 48806606  T

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Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 424
Target Start/End: Complemental strand, 11051520 - 11051489
Alignment:
Q  393 aaggttgaaaaacacatgtaaaatactaaaat 424  Q
    ||||||||||||||||||||||||||||||||    
T  11051520 aaggttgaaaaacacatgtaaaatactaaaat 11051489  T

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Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 492
Target Start/End: Original strand, 11494563 - 11494602
Alignment:
Q  453 ttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  11494563 ttcaaaaccggctgcagttaactgccgaggaaaacctcgg 11494602  T

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Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 485
Target Start/End: Original strand, 30042458 - 30042529
Alignment:
Q  414 aatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaa 485  Q
    |||||||||||||  ||||| |||||| |||||||||| |  |||| ||||||||||||||| |||| ||||    
T  30042458 aatactaaaatgtttttcggcagttaagtgccgaggaaataaaaaattggctgcagttaactgccgaagaaa 30042529  T

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Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 482
Target Start/End: Complemental strand, 46439697 - 46439586
Alignment:
Q  371 aattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagt 470  Q
    ||||||||||||||||| |  | ||| ||| ||||||  ||||||||| ||||| ||  ||||||||||| ||| ||||||   ||||||   |||||||    
T  46439697 aattgttgttgacacatcttgttaggctgagaaacacgagtaaaataccaaaatatccatcggtagttaactgcagaggaaacacaaaaccaactgcagt 46439598  T
Q  471 taactaccgagg 482  Q
    ||||||||||||    
T  46439597 taactaccgagg 46439586  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 21472623 - 21472573
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||||| |||||| ||| ||||||  |||||||||    
T  21472623 gaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatac 21472573  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 34154541 - 34154491
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||||| |||||| ||| ||||||  |||||||||    
T  34154541 gaaaattgttgttgacacatttcataaggctgagaaacacgggtaaaatac 34154491  T

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Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 1736135 - 1736102
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  1736135 ggctgcagttaactaccgaggaaaacttcggcag 1736102  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 486
Target Start/End: Original strand, 3403843 - 3403900
Alignment:
Q  429 ttcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaa 486  Q
    ||||| |||||| |||||||||| || ||| | |||||||||||||| ||||||||||    
T  3403843 ttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaa 3403900  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 10729432 - 10729465
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||||||| ||||    
T  10729432 ggctgcagttaactaccgaggaaaacctcagcag 10729465  T

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Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 10943201 - 10943234
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    ||||||||||||||||||||||||||||| ||||    
T  10943201 ggctgcagttaactaccgaggaaaacctcagcag 10943234  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 12376014 - 12376047
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  12376014 ggctgcagttaactaccgaggaaaacttcggcag 12376047  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 12892558 - 12892501
Alignment:
Q  368 gaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaatg 425  Q
    ||||||||||||  |||||| | ||| |||| ||||||||||||||||||| ||||||    
T  12892558 gaaaattgttgtatacacatctaatagggttaaaaaacacatgtaaaataccaaaatg 12892501  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Complemental strand, 18581435 - 18581402
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttga 400  Q
    ||||||||||||||||||||||| ||||||||||    
T  18581435 agaaaattgttgttgacacatttcataaggttga 18581402  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Original strand, 33409552 - 33409585
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||| |||||||||||||||||||    
T  33409552 ggctgcagttaactcccgaggaaaacctcggcag 33409585  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 33410273 - 33410240
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||| |||||||||||||||||||    
T  33410273 ggctgcagttaactcccgaggaaaacctcggcag 33410240  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 48807430 - 48807341
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| | ||||||||| ||||||| |  |||| || ||| || |||||| |||||||||||||||| |||| ||| ||||    
T  48807430 ggctgcagttaactgctgaggaaaacttcggcagttaactgctgatgaatttcaaaccttaaattaaataaggaaatacacctaaatttt 48807341  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 29700443 - 29700391
Alignment:
Q  366 tagaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatac 418  Q
    |||||||||||||||||||||||| |||||| |||   ||||| |||||||||    
T  29700443 tagaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatac 29700391  T

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Target: scaffold1379 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 462 - 551
Target Start/End: Complemental strand, 478 - 389
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagctg-ctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagttttt 551  Q
    ||||||||||||||  ||||||||||||||| || |  || |||| |||||||||||||||||||||||||||||| |||| |||||||||    
T  478 ggctgcagttaactgtcgaggaaaacctcgggagttaactaccgaggaacttaaaacctgaaattaaataaggaaatacac-taagttttt 389  T

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Target: scaffold0181 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 414
Target Start/End: Original strand, 21024 - 21071
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaa 414  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  21024 agaaaattgttgttgacacatttgagaaggctgaaaaacacatgtaaa 21071  T

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Target: scaffold0155 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 493
Target Start/End: Complemental strand, 13020 - 12957
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcggc 493  Q
    ||||||||||||||| |||||| |   |||| ||||||||||||||||||||||||||||||||    
T  13020 tcggtagttaattgctgaggaaatatgaaaccggctgcagttaactaccgaggaaaacctcggc 12957  T

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Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 46669 - 46726
Alignment:
Q  367 agaaaattgttgttgacacatttgataaggttgaaaaacacatgtaaaatactaaaat 424  Q
    |||||||||||||||||||||  | || || ||||||||||| |||||||||||||||    
T  46669 agaaaattgttgttgacacatgaggtatggctgaaaaacacaagtaaaatactaaaat 46726  T

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Target: scaffold0794 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 492
Target Start/End: Original strand, 5295 - 5330
Alignment:
Q  457 aaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||||||||||||||||||||||||||||    
T  5295 aaaccggctgcagttaactaccgaggaaaacctcgg 5330  T

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Target: scaffold0143 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 485
Target Start/End: Original strand, 3075 - 3165
Alignment:
Q  395 ggttgaaaaacacatgtaaaatactaaaatgtcattcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaa 485  Q
    |||||| |||||||||||||| || ||||| ||  || |||||||| |||||| |||    ||||| ||||||||||||||| ||||||||    
T  3075 ggttgagaaacacatgtaaaagacgaaaatatccctcagtagttaactgccgaagaaaaataaaaccggctgcagttaactatcgaggaaa 3165  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 16031 - 15969
Alignment:
Q  430 tcggtagttaattgccgaggaagttcaaaactggctgcagttaactaccgaggaaaacctcgg 492  Q
    |||| |||||| |||||||||| || ||| |  ||||||||||||| ||||||||||||||||    
T  16031 tcggcagttaactgccgaggaatttgaaatccagctgcagttaactgccgaggaaaacctcgg 15969  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 550
Target Start/End: Original strand, 54594 - 54683
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcagct-gctgccgaagaacttaaaacctgaaattaaataaggaaacacacataagtttt 550  Q
    |||||||||||||| ||||||||||| ||| ||| |  ||||||| ||| || |||  |||||||||||||||||| |||| ||| ||||    
T  54594 ggctgcagttaactgccgaggaaaacatcgacagttaactgccgaggaattttaaatatgaaattaaataaggaaatacacctaaatttt 54683  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 495
Target Start/End: Complemental strand, 134358 - 134325
Alignment:
Q  462 ggctgcagttaactaccgaggaaaacctcggcag 495  Q
    |||||||||||||||||||||||||| |||||||    
T  134358 ggctgcagttaactaccgaggaaaacttcggcag 134325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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