View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11880_low_24 (Length: 379)

Name: NF11880_low_24
Description: NF11880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11880_low_24
NF11880_low_24
[»] chr2 (26 HSPs)
chr2 (48-259)||(18889693-18889905)
chr2 (281-378)||(18889609-18889699)
chr2 (318-378)||(21782836-21782896)
chr2 (318-378)||(21616743-21616803)
chr2 (318-376)||(37411264-37411322)
chr2 (317-378)||(12668441-12668502)
chr2 (318-378)||(23718007-23718067)
chr2 (318-378)||(24105679-24105739)
chr2 (318-378)||(30404868-30404928)
chr2 (323-378)||(37419729-37419784)
chr2 (324-378)||(896198-896252)
chr2 (320-378)||(18276504-18276562)
chr2 (326-372)||(18420458-18420504)
chr2 (324-378)||(31284035-31284089)
chr2 (318-375)||(24894370-24894427)
chr2 (301-378)||(28412314-28412391)
chr2 (345-377)||(2331802-2331834)
chr2 (318-378)||(20539692-20539752)
chr2 (318-378)||(21374717-21374777)
chr2 (318-378)||(28677890-28677950)
chr2 (318-378)||(30717548-30717608)
chr2 (350-378)||(32749843-32749871)
chr2 (318-378)||(35449494-35449554)
chr2 (318-378)||(36756362-36756422)
chr2 (318-378)||(37558958-37559018)
chr2 (318-378)||(39323245-39323305)
[»] chr4 (25 HSPs)
chr4 (55-215)||(21842318-21842478)
chr4 (55-215)||(21898181-21898341)
chr4 (325-374)||(1747200-1747249)
chr4 (318-378)||(14126129-14126189)
chr4 (306-378)||(19482637-19482709)
chr4 (318-378)||(21945484-21945544)
chr4 (343-378)||(8423736-8423771)
chr4 (323-378)||(15029751-15029806)
chr4 (257-296)||(21842241-21842280)
chr4 (257-296)||(21898104-21898143)
chr4 (323-378)||(36635310-36635365)
chr4 (336-374)||(7670683-7670721)
chr4 (324-378)||(20743296-20743350)
chr4 (328-378)||(40613441-40613491)
chr4 (345-378)||(903930-903963)
chr4 (321-378)||(11596370-11596427)
chr4 (345-378)||(22440618-22440651)
chr4 (301-374)||(23293008-23293081)
chr4 (337-378)||(28964266-28964307)
chr4 (337-378)||(56257933-56257974)
chr4 (318-378)||(3947784-3947844)
chr4 (316-372)||(8820387-8820443)
chr4 (323-375)||(11651155-11651207)
chr4 (343-379)||(23700473-23700509)
chr4 (323-378)||(35723402-35723458)
[»] chr6 (31 HSPs)
chr6 (305-378)||(8805590-8805663)
chr6 (308-378)||(7086766-7086836)
chr6 (318-378)||(9658860-9658920)
chr6 (326-378)||(19040341-19040393)
chr6 (323-378)||(7265611-7265666)
chr6 (323-378)||(7996396-7996451)
chr6 (323-378)||(8022350-8022405)
chr6 (323-378)||(16766683-16766738)
chr6 (324-378)||(26562676-26562730)
chr6 (337-378)||(9025512-9025553)
chr6 (318-378)||(9027159-9027219)
chr6 (318-378)||(12696305-12696365)
chr6 (318-378)||(13851717-13851777)
chr6 (318-378)||(16833289-16833349)
chr6 (318-378)||(17841607-17841667)
chr6 (318-378)||(28152080-28152139)
chr6 (318-378)||(34073365-34073425)
chr6 (318-369)||(677818-677869)
chr6 (323-373)||(7723273-7723323)
chr6 (316-378)||(25096402-25096464)
chr6 (300-378)||(34595097-34595175)
chr6 (301-378)||(9107388-9107465)
chr6 (325-378)||(17341682-17341735)
chr6 (323-376)||(19044450-19044503)
chr6 (345-378)||(31579243-31579276)
chr6 (318-378)||(3398600-3398659)
chr6 (326-378)||(7977848-7977900)
chr6 (306-378)||(8365537-8365609)
chr6 (318-378)||(8776991-8777051)
chr6 (324-376)||(10339146-10339198)
chr6 (318-378)||(17435180-17435240)
[»] chr1 (39 HSPs)
chr1 (316-377)||(2896140-2896201)
chr1 (322-378)||(36878446-36878502)
chr1 (318-378)||(398783-398843)
chr1 (318-378)||(7918229-7918289)
chr1 (318-378)||(16927203-16927263)
chr1 (306-378)||(19324531-19324603)
chr1 (323-378)||(17831549-17831604)
chr1 (344-378)||(10233260-10233294)
chr1 (324-378)||(19562639-19562693)
chr1 (323-376)||(10474997-10475050)
chr1 (329-378)||(12443478-12443527)
chr1 (301-378)||(34298400-34298477)
chr1 (337-378)||(40181871-40181912)
chr1 (318-378)||(5898284-5898344)
chr1 (318-374)||(6415023-6415079)
chr1 (318-378)||(15641048-15641108)
chr1 (327-378)||(113289-113340)
chr1 (323-378)||(3490408-3490463)
chr1 (323-378)||(6427336-6427391)
chr1 (343-378)||(31015049-31015084)
chr1 (323-378)||(38075988-38076043)
chr1 (324-378)||(10572607-10572661)
chr1 (324-378)||(38078679-38078733)
chr1 (308-378)||(41877488-41877558)
chr1 (345-378)||(1864898-1864931)
chr1 (318-378)||(9690292-9690350)
chr1 (325-378)||(20157368-20157421)
chr1 (301-378)||(42359467-42359544)
chr1 (324-372)||(1262871-1262919)
chr1 (326-378)||(1486727-1486779)
chr1 (318-378)||(5376518-5376578)
chr1 (330-378)||(13436451-13436499)
chr1 (318-378)||(14359540-14359599)
chr1 (318-378)||(17754292-17754352)
chr1 (342-378)||(25452166-25452202)
chr1 (318-378)||(27471584-27471644)
chr1 (350-378)||(34371726-34371754)
chr1 (318-378)||(37055874-37055934)
chr1 (318-378)||(46348401-46348461)
[»] chr7 (26 HSPs)
chr7 (323-378)||(32308106-32308161)
chr7 (320-378)||(30813795-30813853)
chr7 (318-378)||(26329400-26329460)
chr7 (306-374)||(26733273-26733341)
chr7 (316-378)||(22868021-22868083)
chr7 (316-378)||(29787387-29787449)
chr7 (301-378)||(30731001-30731078)
chr7 (318-379)||(43027486-43027547)
chr7 (318-378)||(20549772-20549832)
chr7 (318-378)||(27945022-27945082)
chr7 (323-378)||(1401011-1401066)
chr7 (343-378)||(2424620-2424655)
chr7 (323-378)||(9482920-9482975)
chr7 (318-373)||(11722121-11722176)
chr7 (323-378)||(23191882-23191937)
chr7 (323-378)||(24339628-24339683)
chr7 (323-378)||(25481888-25481943)
chr7 (310-375)||(12289086-12289152)
chr7 (305-378)||(3142096-3142169)
chr7 (337-378)||(21880152-21880193)
chr7 (318-378)||(5235967-5236027)
chr7 (322-378)||(6630930-6630986)
chr7 (308-372)||(19206021-19206085)
chr7 (318-374)||(22484006-22484062)
chr7 (318-378)||(22602728-22602788)
chr7 (318-378)||(43249974-43250034)
[»] chr3 (29 HSPs)
chr3 (300-378)||(28917964-28918042)
chr3 (337-378)||(11251978-11252019)
chr3 (324-378)||(4987309-4987363)
chr3 (318-378)||(8383238-8383298)
chr3 (323-374)||(1438790-1438841)
chr3 (310-377)||(11610494-11610561)
chr3 (323-378)||(21479104-21479159)
chr3 (329-379)||(5339100-5339150)
chr3 (318-372)||(5441055-5441109)
chr3 (324-378)||(10954939-10954993)
chr3 (336-378)||(11313818-11313860)
chr3 (318-376)||(11658796-11658854)
chr3 (318-372)||(14829671-14829724)
chr3 (320-378)||(26508093-26508151)
chr3 (301-378)||(3164043-3164120)
chr3 (337-378)||(9624641-9624682)
chr3 (301-378)||(24205059-24205136)
chr3 (337-378)||(27277856-27277897)
chr3 (301-378)||(34307798-34307875)
chr3 (323-372)||(40052318-40052367)
chr3 (318-378)||(11493379-11493439)
chr3 (318-378)||(16000034-16000094)
chr3 (318-378)||(21720745-21720805)
chr3 (318-378)||(25064890-25064950)
chr3 (318-378)||(25093483-25093543)
chr3 (301-377)||(25652050-25652126)
chr3 (318-378)||(25948905-25948965)
chr3 (318-378)||(26492223-26492283)
chr3 (343-379)||(51206370-51206406)
[»] scaffold0103 (1 HSPs)
scaffold0103 (318-378)||(51792-51852)
[»] chr8 (25 HSPs)
chr8 (318-378)||(14134680-14134740)
chr8 (318-378)||(24362220-24362280)
chr8 (339-378)||(3025553-3025592)
chr8 (323-378)||(13844614-13844669)
chr8 (323-378)||(34897071-34897126)
chr8 (329-378)||(31236595-31236644)
chr8 (301-378)||(44067480-44067557)
chr8 (318-378)||(20873050-20873110)
chr8 (323-378)||(39954297-39954352)
chr8 (320-378)||(20679413-20679471)
chr8 (318-372)||(22651957-22652011)
chr8 (317-370)||(12936517-12936570)
chr8 (323-372)||(13436988-13437037)
chr8 (337-378)||(14731712-14731753)
chr8 (343-376)||(18067954-18067987)
chr8 (329-378)||(27213539-27213588)
chr8 (337-378)||(40332191-40332232)
chr8 (318-378)||(4673443-4673503)
chr8 (323-378)||(8342960-8343013)
chr8 (318-378)||(8343297-8343357)
chr8 (318-378)||(24669414-24669474)
chr8 (318-374)||(29510326-29510382)
chr8 (318-374)||(29776017-29776073)
chr8 (318-378)||(36450772-36450832)
chr8 (323-375)||(41838144-41838196)
[»] chr5 (24 HSPs)
chr5 (318-378)||(6326315-6326375)
chr5 (318-378)||(27144444-27144504)
chr5 (323-378)||(19438329-19438384)
chr5 (318-378)||(14674250-14674310)
chr5 (318-378)||(21191074-21191134)
chr5 (318-378)||(43001781-43001841)
chr5 (323-378)||(3966489-3966544)
chr5 (343-378)||(6471907-6471942)
chr5 (316-375)||(19579680-19579739)
chr5 (300-375)||(21137652-21137727)
chr5 (323-378)||(31084309-31084364)
chr5 (323-378)||(39698527-39698582)
chr5 (324-378)||(6247609-6247663)
chr5 (320-378)||(12927637-12927695)
chr5 (328-378)||(28588692-28588742)
chr5 (320-370)||(39205863-39205913)
chr5 (301-378)||(13287417-13287494)
chr5 (322-371)||(26716129-26716178)
chr5 (322-371)||(26985869-26985918)
chr5 (337-378)||(41091275-41091316)
chr5 (318-378)||(16203813-16203873)
chr5 (318-378)||(21522731-21522791)
chr5 (318-378)||(21533297-21533357)
chr5 (318-378)||(41995452-41995512)
[»] scaffold0004 (1 HSPs)
scaffold0004 (323-378)||(92793-92848)
[»] scaffold0306 (1 HSPs)
scaffold0306 (318-375)||(13381-13438)
[»] scaffold0152 (1 HSPs)
scaffold0152 (318-375)||(21889-21946)
[»] scaffold0223 (1 HSPs)
scaffold0223 (318-378)||(20153-20213)
[»] scaffold0020 (1 HSPs)
scaffold0020 (318-378)||(135330-135390)
[»] scaffold0008 (1 HSPs)
scaffold0008 (318-378)||(263390-263450)
[»] scaffold0652 (1 HSPs)
scaffold0652 (323-378)||(480-535)
[»] scaffold0085 (1 HSPs)
scaffold0085 (318-372)||(26374-26428)
[»] scaffold0003 (1 HSPs)
scaffold0003 (300-378)||(241557-241635)
[»] scaffold1528 (1 HSPs)
scaffold1528 (318-378)||(1016-1076)
[»] scaffold0171 (1 HSPs)
scaffold0171 (318-378)||(23401-23461)
[»] scaffold0044 (1 HSPs)
scaffold0044 (346-378)||(53189-53221)
[»] scaffold0027 (1 HSPs)
scaffold0027 (318-378)||(46663-46723)


Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 48 - 259
Target Start/End: Complemental strand, 18889905 - 18889693
Alignment:
Q  48 aattgggttctttaatgagaaattttagactggttaatgctgctacgggcacggggaagactattgcatacctggctccaataattcatcacttgcagag 147  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18889905 aattgggttctttaatgagaaaatttagactggttaatgctgctactggcacggggaagactattgcatacctggctccaataattcatcacttgcagag 18889806  T
Q  148 ttatgataagagaattcagcgctccgatggaacatttggtgtg-tgttattattcttttcaatactattattttatacttaggtaccattgtgtcattgc 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18889805 ttatgataagagaattcagcgctccgatggaacatttggtgtgttgttattgttcttttcaatactattattttatacttaagtaccattgtgtcattgc 18889706  T
Q  247 ttttatttacttc 259  Q
    ||||||| |||||    
T  18889705 ttttattcacttc 18889693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 378
Target Start/End: Complemental strand, 18889699 - 18889609
Alignment:
Q  281 tcacttctattgtttgtacgcacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||||||||||||||||||||||||| | |||| |||||       |||||   ||||||||||||||||||||||||||||||||||||    
T  18889699 tcacttctattgtttgtacgcacgaacaccagacacgacacggacac-------gcgacgccgctaataaattgagaaaatcacataattcagtgtaa 18889609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 21782896 - 21782836
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  21782896 acacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaa 21782836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 21616743 - 21616803
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||| |||||| |||||  |||||||| |||||||||||||||||||||||||||    
T  21616743 acacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaa 21616803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 37411322 - 37411264
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgt 376  Q
    |||||||| |||||| | |||||  |||||||| |||||||||||||||||||||||||    
T  37411322 acacagacgctgacatgccgacaccgctaataatttgagaaaatcacataattcagtgt 37411264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 317 - 378
Target Start/End: Complemental strand, 12668502 - 12668441
Alignment:
Q  317 aacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| ||||||||| ||||||  ||||||| |||| ||||| ||||||||||||||||    
T  12668502 aacacagatactgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaa 12668441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 23718007 - 23718067
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||  |||||  |||||||| |||||||| ||||||||||||||||||    
T  23718007 acacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaa 23718067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 24105679 - 24105739
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||  |||||  |||||||| |||||||| ||||||||||||||||||    
T  24105679 acacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaa 24105739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 30404928 - 30404868
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  | |||||| |||| ||||||||||||||||||||||    
T  30404928 acacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaa 30404868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 37419729 - 37419784
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| |||||| || ||||| |||| ||||||||| ||||||||||||    
T  37419729 gacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaa 37419784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 896198 - 896252
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| ||||| ||||||||  |||||||||||||||| |||| |||||    
T  896198 acactgacacgccgacactgctaatagtttgagaaaatcacatatttcaatgtaa 896252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 18276504 - 18276562
Alignment:
Q  320 acagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| | | |||||  |||||||| ||||||||||||| |||||||||||||    
T  18276504 acagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaa 18276562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 18420504 - 18420458
Alignment:
Q  326 actgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    ||||||||| | ||| ||||||||| |||||||||||||||||||||    
T  18420504 actgacacgccaacactgctaataatttgagaaaatcacataattca 18420458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 31284035 - 31284089
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||| ||||| ||||||||| |||||||||||||||||| || |||||    
T  31284035 acacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaa 31284089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 24894370 - 24894427
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtg 375  Q
    |||| |||||||||||| |||||  |||||||| || | |||||||||||||||||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtg 24894427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 28412314 - 28412391
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| | |||| |||||| ||||| | |||  | |||||| |||| ||||||||||||||||||||||    
T  28412314 cacggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaa 28412391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 377
Target Start/End: Original strand, 2331802 - 2331834
Alignment:
Q  345 taataaattgagaaaatcacataattcagtgta 377  Q
    |||||| ||||||||||||||||||||||||||    
T  2331802 taataatttgagaaaatcacataattcagtgta 2331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 20539752 - 20539692
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||||| |||||| |||||||    
T  20539752 acacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaa 20539692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 21374777 - 21374717
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||| ||||| |||||  |||||||| |||| ||||| ||||||||||||||||    
T  21374777 acacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaa 21374717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 28677890 - 28677950
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||  ||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  28677890 acactgacactggaacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaa 28677950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 30717608 - 30717548
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||||   |||||  |||||||| |||| ||||||||||||||||||||||    
T  30717608 acacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaa 30717548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 350 - 378
Target Start/End: Complemental strand, 32749871 - 32749843
Alignment:
Q  350 aattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||||||||||||||||||||    
T  32749871 aattgagaaaatcacataattcagtgtaa 32749843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 35449494 - 35449554
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||||||| | | ||| || |||||| |||||||||||||| ||||||||||||    
T  35449494 acacaaacactgacaagccaacactgttaataatttgagaaaatcacagaattcagtgtaa 35449554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 36756422 - 36756362
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| |||||   ||||||| ||||  |||| ||||||||||||||||    
T  36756422 acacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaa 36756362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 37558958 - 37559018
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||  |||||||||||||||| |||||    
T  37558958 acacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaa 37559018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 39323245 - 39323305
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||| ||| |||||  |||||||| |||| ||||| ||||||||||||||||    
T  39323245 acacggacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaa 39323305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 1e-66; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 21842478 - 21842318
Alignment:
Q  55 ttctttaatgagaaattttagactggttaatgctgctacgggcacggggaagactattgcatacctggctccaataattcatcacttgcagagttatgat 154  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21842478 ttctttaatgagaaaatttagactggttaatgctgctacgggcacagggaagactattgcatacctggctccgataattcatcacttgcagagttatgat 21842379  T
Q  155 aagagaattcagcgctccgatggaacatttggtgtgtgttattattcttttcaatactatt 215  Q
    |||||| ||||||||||||||||||||||||||| |||||||| || ||||||| ||||||    
T  21842378 aagagagttcagcgctccgatggaacatttggtgagtgttatttttgttttcaacactatt 21842318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 21898341 - 21898181
Alignment:
Q  55 ttctttaatgagaaattttagactggttaatgctgctacgggcacggggaagactattgcatacctggctccaataattcatcacttgcagagttatgat 154  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21898341 ttctttaatgagaaaatttagactggttaatgctgctacgggcacagggaagactattgcatacctggctccgataattcatcacttgcagagttatgat 21898242  T
Q  155 aagagaattcagcgctccgatggaacatttggtgtgtgttattattcttttcaatactatt 215  Q
    |||||| ||||||||||||||||||||||||||| |||||||| || ||||||| ||||||    
T  21898241 aagagagttcagcgctccgatggaacatttggtgagtgttatttttgttttcaacactatt 21898181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 1747200 - 1747249
Alignment:
Q  325 cactgacacggcgacattgctaataaattgagaaaatcacataattcagt 374  Q
    |||| ||||| |||||  ||||||||||||||||||||||||||||||||    
T  1747200 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 1747249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 14126189 - 14126129
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| ||||| ||||| || |||||| |||| ||| ||||||||||||||||||    
T  14126189 acacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaa 14126129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 378
Target Start/End: Original strand, 19482637 - 19482709
Alignment:
Q  306 acaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||| | ||||||||||||||||| |||||   ||||||| |||| || |||||||||||| ||||||    
T  19482637 acaccagacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaa 19482709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 21945484 - 21945544
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||| | |||||  |||||||| |||| ||||| ||||||||||||||||    
T  21945484 acacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaa 21945544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 343 - 378
Target Start/End: Complemental strand, 8423771 - 8423736
Alignment:
Q  343 gctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| |||||||||||||||||||||||||||    
T  8423771 gctaataatttgagaaaatcacataattcagtgtaa 8423736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 15029751 - 15029806
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||  |||| ||||||||| |||| || |||||||||||||||||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaa 15029806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 21842280 - 21842241
Alignment:
Q  257 ttcacctatttgttcagcttctcatcacttctattgtttg 296  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  21842280 ttcacctatttgttcagcttctcgtcacttctgttgtttg 21842241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 21898143 - 21898104
Alignment:
Q  257 ttcacctatttgttcagcttctcatcacttctattgtttg 296  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  21898143 ttcacctatttgttcagcttctcgtcacttctgttgtttg 21898104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 36635310 - 36635365
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| | |||   ||||||| |||||||||||||||||||||||||||    
T  36635310 gacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaa 36635365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 7670683 - 7670721
Alignment:
Q  336 cgacattgctaataaattgagaaaatcacataattcagt 374  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  7670683 cgacattgctaatagtttgagaaaatcacataattcagt 7670721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 20743350 - 20743296
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| |||||  | |||||| |||||||||| ||||||||||||||||    
T  20743350 acactgacacgccgacacggataataatttgagaaaatgacataattcagtgtaa 20743296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 40613441 - 40613491
Alignment:
Q  328 tgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||| |||||  |||||||  |||||||||||||||||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaa 40613491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 903930 - 903963
Alignment:
Q  345 taataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| |||||||||||||||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaa 903963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 11596427 - 11596370
Alignment:
Q  321 cagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| ||| | |||  |||||||| |||| ||||||||||||||||||||||    
T  11596427 cagacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaa 11596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 378
Target Start/End: Complemental strand, 22440651 - 22440618
Alignment:
Q  345 taataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| |||||||||||||||||||||||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaa 22440618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 23293081 - 23293008
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagt 374  Q
    |||| ||||| ||| | |||| |||| ||||||| |||||  |||||||| |||| ||||||||||||||||||    
T  23293081 cacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagt 23293008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 28964307 - 28964266
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| |||||||| |||| ||||||||||||||||||||||    
T  28964307 gacatagctaataatttgaaaaaatcacataattcagtgtaa 28964266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 56257933 - 56257974
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| |||||||||||| ||||||||||||||    
T  56257933 gacactgctaataatttgagaaaatcatataattcagtgtaa 56257974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 3947844 - 3947784
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| |||| | |||||  |||||||| |||| |||||| |||||||||||||||    
T  3947844 acacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaa 3947784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 8820387 - 8820443
Alignment:
Q  316 caacacagacactgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    ||||||| ||||||||||| | |||| | |||||| |||| ||||||||||||||||    
T  8820387 caacacaaacactgacacgtcaacatcgataataatttgataaaatcacataattca 8820443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 11651207 - 11651155
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtg 375  Q
    |||||||||||| |||||  |||||||| || | |||||||||||||||||||    
T  11651207 gacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 379
Target Start/End: Original strand, 23700473 - 23700509
Alignment:
Q  343 gctaataaattgagaaaatcacataattcagtgtaaa 379  Q
    |||| |||||||||||||| |||||||||||||||||    
T  23700473 gctagtaaattgagaaaattacataattcagtgtaaa 23700509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 35723458 - 35723402
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaat-cacataattcagtgtaa 378  Q
    |||||||||||| |||||  |||||||| |||||||||| ||||||||||| |||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaa 35723402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 8805663 - 8805590
Alignment:
Q  305 aacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| | |||||||||| |||||| || || ||||||||| ||||||||||||||||||| |||||||    
T  8805663 aacaccagacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaa 8805590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 378
Target Start/End: Original strand, 7086766 - 7086836
Alignment:
Q  308 accagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||| | |||||||||| |||||| || || ||||||||| ||||||||||||||||||| |||||||    
T  7086766 accagacacgacacagacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaa 7086836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 9658860 - 9658920
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| || ||||||||||||||||||||||||    
T  9658860 acacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaa 9658920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 19040341 - 19040393
Alignment:
Q  326 actgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||| |||||  |||||||| |||||||||||||||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaa 19040393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 7265666 - 7265611
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| | |||  |||||||| |||||||||||||||||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaa 7265611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 7996451 - 7996396
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| | ||||| ||||||||| |||||||||||| ||||||||||||||    
T  7996451 gacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaa 7996396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 8022350 - 8022405
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| | ||||| ||||||||| |||||||||||| ||||||||||||||    
T  8022350 gacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaa 8022405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 16766683 - 16766738
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  16766683 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 16766738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 26562676 - 26562730
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||| ||||| |||||| || |||||||||||||||||||||||||||    
T  26562676 acacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaa 26562730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 9025553 - 9025512
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaa 9025512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 9027159 - 9027219
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||||| ||||||||||||| ||||||    
T  9027159 acacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaa 9027219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 12696305 - 12696365
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||| ||||||||||||||||    
T  12696305 acacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaa 12696365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 13851717 - 13851777
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||||||||| || |||||||||||||    
T  13851717 acacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaa 13851777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 16833289 - 16833349
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| |||||   ||||||| |||| ||||||||||| ||||||||||    
T  16833289 acacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaa 16833349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 17841667 - 17841607
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| |||||||||||||| |||||||    
T  17841667 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaa 17841607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 28152080 - 28152139
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  28152080 acacggacactgacacgccgacaaagctaataatttga-aaaatcacataattcagtgtaa 28152139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 34073425 - 34073365
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||| | | |||| |||||||| ||||||||||| |||||||||||||||    
T  34073425 acacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaa 34073365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 677818 - 677869
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataat 369  Q
    ||||||||||||||||| ||||| || |||||| |||||||||||| |||||    
T  677818 acacagacactgacacgccgacactgttaataatttgagaaaatcatataat 677869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 7723323 - 7723273
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcag 373  Q
    ||||||||||||  |||| ||||||||| |||||||||||| |||||||||    
T  7723323 gacactgacacgtggacactgctaataatttgagaaaatcatataattcag 7723273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 378
Target Start/End: Original strand, 25096402 - 25096464
Alignment:
Q  316 caacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| |||||| |||||   ||||||| ||||||||||||||||||  |||||||    
T  25096402 caacacagacaccgacacgacgacaccactaataatttgagaaaatcacataatctagtgtaa 25096464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 378
Target Start/End: Original strand, 34595097 - 34595175
Alignment:
Q  300 gcacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||| ||| | |||| |||| ||||||| |||||   ||||||| |||| ||||||||||||||||||||||    
T  34595097 gcacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaa 34595175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 9107465 - 9107388
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||| ||| | |||| |||||| ||||| |||||  |||||||| |||| ||||||||| ||||||||||||    
T  9107465 cacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaa 9107388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 17341735 - 17341682
Alignment:
Q  325 cactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| |||||  | |||||| |||| ||||||||||||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaa 17341682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 19044450 - 19044503
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgt 376  Q
    |||||||||||| |||||   ||||||| ||||||| |||||||||||||||||    
T  19044450 gacactgacacgccgacacgactaataatttgagaatatcacataattcagtgt 19044503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 378
Target Start/End: Complemental strand, 31579276 - 31579243
Alignment:
Q  345 taataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| |||||||||||||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaa 31579243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 3398600 - 3398659
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||||| ||||||||||||||    
T  3398600 acacggacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaa 3398659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 7977900 - 7977848
Alignment:
Q  326 actgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||| |||||  |||||||| |||| ||||| ||||||||||||||||    
T  7977900 actgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaa 7977848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 8365609 - 8365537
Alignment:
Q  306 acaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||| | |||| |||||||||||| |||||   ||||||| |||| || |||||||||||| ||||||    
T  8365609 acaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaa 8365537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 8777051 - 8776991
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||   ||||||| |||| ||||||||| ||||||||||||    
T  8777051 acacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaa 8776991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 10339198 - 10339146
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgt 376  Q
    ||||||||||| |||||  || | ||| |||||||||||||||||||||||||    
T  10339198 acactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgt 10339146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 17435180 - 17435240
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||| ||| |||||| |||||||| || | ||||| ||||||||||||||||    
T  17435180 acacggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaa 17435240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 316 - 377
Target Start/End: Complemental strand, 2896201 - 2896140
Alignment:
Q  316 caacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgta 377  Q
    |||||| |||||||||||| |||||  |||||||| ||||||||||||||||||||||||||    
T  2896201 caacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 322 - 378
Target Start/End: Original strand, 36878446 - 36878502
Alignment:
Q  322 agacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||    
T  36878446 agacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaa 36878502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 398843 - 398783
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  398843 acacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaa 398783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 7918289 - 7918229
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||| |||||||  |||||  ||||||| |||||||||||||||||||||||||||    
T  7918289 acacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaa 7918229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 16927263 - 16927203
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| || ||| |||||||| |||| ||||||| ||||||||||||||    
T  16927263 acacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaa 16927203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 378
Target Start/End: Original strand, 19324531 - 19324603
Alignment:
Q  306 acaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||| || ||||| |||||| ||| ||||| |||| |||| |||||||||||||||||||||||||||    
T  19324531 acaccggacacagcacaggcactgatacgtcgacactgctgataatttgagaaaatcacataattcagtgtaa 19324603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 17831604 - 17831549
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| |||||  |||||||| ||||||||||||||| |||||||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaa 17831549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 378
Target Start/End: Original strand, 10233260 - 10233294
Alignment:
Q  344 ctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||||||||||||||||||||||||||    
T  10233260 ctaataaattgagaaaatcacataattcagtgtaa 10233294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 19562693 - 19562639
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| ||||| ||||||||| ||||||||||| |||| ||||||||||    
T  19562693 acactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaa 19562639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 10475050 - 10474997
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgt 376  Q
    |||| ||||||| |||||  |||||||| |||||||||||||||||||||||||    
T  10475050 gacattgacacgccgacaccgctaataacttgagaaaatcacataattcagtgt 10474997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 12443527 - 12443478
Alignment:
Q  329 gacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| |||||  |||||||| |||||||||||||||||||||||||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattcagtgtaa 12443478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 34298400 - 34298477
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| | |||| || ||||||||  |||||   ||||||| |||||||||||||||||||||||||||    
T  34298400 cacgtacaccagacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaa 34298477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 40181871 - 40181912
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaa 40181912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 5898344 - 5898284
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||| ||| |||||  ||||||||  ||| ||||||||||||||||||||||    
T  5898344 acacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaa 5898284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 6415079 - 6415023
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagt 374  Q
    |||| |||||||||||| |||||| |||||| | |||||||||||||||||| ||||    
T  6415079 acacggacactgacacgccgacatcgctaattatttgagaaaatcacataatacagt 6415023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 15641108 - 15641048
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||| | ||||| ||||||||| || |||||||||||| |||||||||||    
T  15641108 acacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaa 15641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 327 - 378
Target Start/End: Original strand, 113289 - 113340
Alignment:
Q  327 ctgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 113340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 3490463 - 3490408
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| ||||| ||||||||| |||||||||  |||| |||||||||||    
T  3490463 gacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaa 3490408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 6427336 - 6427391
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| | |||  |||||||| ||||||||||||||||||||| |||||    
T  6427336 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaa 6427391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 31015049 - 31015084
Alignment:
Q  343 gctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| |||||||||||||||||||||||||||    
T  31015049 gctaataatttgagaaaatcacataattcagtgtaa 31015084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 38076043 - 38075988
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| |||||| ||||| ||||||||| ||||| ||||||||||| |||||||||    
T  38076043 gacacggacacgacgacactgctaataatttgagtaaatcacataagtcagtgtaa 38075988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 10572661 - 10572607
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| |||||   ||||||| |||||||||||||||||||| ||||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaa 10572607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 38078733 - 38078679
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| |||||  |||||||| |||| |||||||||||||||| |||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaa 38078679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 378
Target Start/End: Complemental strand, 41877558 - 41877488
Alignment:
Q  308 accagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||| | ||||||||||||  ||| |||||  |||||||| |||||||||| |||||||| |||||||    
T  41877558 accagacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaa 41877488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 378
Target Start/End: Complemental strand, 1864931 - 1864898
Alignment:
Q  345 taataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| |||||||||||||||||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaa 1864898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 9690350 - 9690292
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||||||||  ||||  ||||||||| ||||||||||||  ||||||||||||    
T  9690350 acacagacactgacacgctgacaccgctaataaactgagaaaatcac--aattcagtgtaa 9690292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 20157421 - 20157368
Alignment:
Q  325 cactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||  |||||  ||||||||  ||||||||||||||||||||||||||    
T  20157421 cactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaa 20157368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 42359544 - 42359467
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||  || |||||| ||||||||||||  ||||   ||||||| |||| ||||||||| ||||||||||||    
T  42359544 cacgaacaccgtacacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaa 42359467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 1262871 - 1262919
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    |||| |||||| |||||  |||||||| |||||||||||||||||||||    
T  1262871 acacggacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 1486779 - 1486727
Alignment:
Q  326 actgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||  ||||  |||||||| |||| ||||||||||||||||||||||    
T  1486779 actgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaa 1486727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 5376578 - 5376518
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||| ||||| |||||  |||||||| || ||||||| ||||||||||||||||    
T  5376578 acacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaa 5376518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 13436451 - 13436499
Alignment:
Q  330 acacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||| ||||||||| || || |||||||||||||||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaa 13436499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 14359599 - 14359540
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| |||||| |||||  |||||||| |||| |||||||||||||| |||||||    
T  14359599 acacagacacggacacgccgacacagctaataatttga-aaaatcacataatttagtgtaa 14359540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 17754292 - 17754352
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| |||||||  |||||  |||||||| |||| ||||| ||||||||||||||||    
T  17754292 acacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 17754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 25452202 - 25452166
Alignment:
Q  342 tgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  25452202 tgctaataatttgagaaaatctcataattcagtgtaa 25452166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 27471644 - 27471584
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||||||||  ||| |  |||||||| ||||||||| |||||||||||||||||    
T  27471644 acacaaacactgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaa 27471584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 350 - 378
Target Start/End: Original strand, 34371726 - 34371754
Alignment:
Q  350 aattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||||||||||||||||||||    
T  34371726 aattgagaaaatcacataattcagtgtaa 34371754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 37055934 - 37055874
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||| ||  ||| | ||||||||| |||||||||| |||||||| |||||||    
T  37055934 acacagacactgatacatcgatactgctaataatttgagaaaattacataatttagtgtaa 37055874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 46348461 - 46348401
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||||| |||||| |||||||    
T  46348461 acacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaa 46348401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 32308106 - 32308161
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| |||||  |||||||| |||||||||||||||||||||||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaa 32308161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 30813795 - 30813853
Alignment:
Q  320 acagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| ||  ||||||||||||||| |||||||||| ||||||||||||||||    
T  30813795 acagacactgatactccgacattgctaataatttgagaaaattacataattcagtgtaa 30813853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 26329460 - 26329400
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| |||||| | |||||| ||||||||| |||| ||||||||||||    
T  26329460 acacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaa 26329400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 26733273 - 26733341
Alignment:
Q  306 acaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagt 374  Q
    ||||||||| | |||| |||||||||||| |||||  |||||||| |||| ||||||||||||||||||    
T  26733273 acaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagt 26733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 378
Target Start/End: Original strand, 22868021 - 22868083
Alignment:
Q  316 caacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| |||||||||||| |||||   |||||||  ||||||||||||||||||||||||||    
T  22868021 caacaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaa 22868083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 29787449 - 29787387
Alignment:
Q  316 caacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| |||| | ||||| |||||  |||||||| |||||||||||||||||||||||||||    
T  29787449 caacacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaa 29787387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 30731001 - 30731078
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| | ||||| ||| || |||| |||||  || ||||| |||||||||||||||||||||||||||    
T  30731001 cacggacaccagacacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaa 30731078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 43027547 - 43027486
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaaa 379  Q
    |||| |||||||||||||||||   |||||||| |||| ||||||||||||| |||||||||    
T  43027547 acacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaa 43027486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 20549772 - 20549832
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||||||||  |||||  |||||||| ||||||||||||| |||||||||||||    
T  20549772 acacatacactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaa 20549832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 27945022 - 27945082
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||   ||||||| |||||||||| ||||||||||||||||    
T  27945022 acacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaa 27945082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 1401011 - 1401066
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||  || || |||||||| |||||||| ||||||||||||||||||    
T  1401011 gacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaa 1401066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 2424620 - 2424655
Alignment:
Q  343 gctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| |||||||||||||||||||||||||||    
T  2424620 gctaataatttgagaaaatcacataattcagtgtaa 2424655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 9482920 - 9482975
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||  |||||| ||| |||| |||||||||||||| ||||||||||||    
T  9482920 gacactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaa 9482975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 373
Target Start/End: Complemental strand, 11722176 - 11722121
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcag 373  Q
    |||| |||||||||||| |||||  ||||| || ||||||||||||||||||||||    
T  11722176 acacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 23191882 - 23191937
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| ||| |||||  |||||||| |||||||||||||||| ||||||||||    
T  23191882 gacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaa 23191937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 24339628 - 24339683
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  24339628 gacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 24339683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 25481888 - 25481943
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  25481888 gacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 25481943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 375
Target Start/End: Original strand, 12289086 - 12289152
Alignment:
Q  310 cagacccaacacagacactgacacggcgac-attgctaataaattgagaaaatcacataattcagtg 375  Q
    ||||| |||||| ||||| |||||| || | | ||||||||| ||||||||||||||||||||||||    
T  12289086 cagacacaacacggacaccgacacgccggccactgctaataatttgagaaaatcacataattcagtg 12289152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 3142169 - 3142096
Alignment:
Q  305 aacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| || || |||||  |  || ||||||||||||||| |||||| |||||||| |||||    
T  3142169 aacaccagacccaacacggataccgacacaccagcactgctaataaattgagtaaatcatataattcaatgtaa 3142096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 21880152 - 21880193
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| |||||||| |||||||||| ||||||||||||||||    
T  21880152 gacatcgctaataatttgagaaaattacataattcagtgtaa 21880193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 5235967 - 5236027
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| |||||  |||||||| || ||||||| | |||||| |||||||    
T  5235967 acacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaa 5236027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 6630986 - 6630930
Alignment:
Q  322 agacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||| |||||   ||||||| |||||||| |||| |||||||||||||    
T  6630986 agacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaa 6630930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 372
Target Start/End: Original strand, 19206021 - 19206085
Alignment:
Q  308 accagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    ||||||| | |||| |||||  ||||| |||||  |||||||| |||||||||||||||||||||    
T  19206021 accagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattca 19206085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 22484006 - 22484062
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagt 374  Q
    ||||||||||||||||| |||||  |||||||| || |||||||  |||||||||||    
T  22484006 acacagacactgacacgccgacaccgctaataattttagaaaattgcataattcagt 22484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 22602788 - 22602728
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| |||||||||| |||||  |  ||| | |||||||||||||||||||||||||||    
T  22602788 acacaggcactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaa 22602728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 43249974 - 43250034
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  | |||||| |||||||||| ||||||| ||||||||    
T  43249974 acacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaa 43250034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 378
Target Start/End: Original strand, 28917964 - 28918042
Alignment:
Q  300 gcacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||| ||| | |||| || ||||||||| |||||| |||||||| |||| ||||||||||||||||||||||    
T  28917964 gcacggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaa 28918042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 11251978 - 11252019
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  11251978 gacattgctaataatttgagaaaatcacataattcagtgtaa 11252019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 4987363 - 4987309
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 4987309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 8383238 - 8383298
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||| ||||||| |||||  |||||||| |||||||||||| ||||||||||||||    
T  8383238 acacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaa 8383298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 374
Target Start/End: Original strand, 1438790 - 1438841
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagt 374  Q
    |||||||||||  |||||| ||||| || |||||||||||||||||||||||    
T  1438790 gacactgacacaccgacatcgctaacaatttgagaaaatcacataattcagt 1438841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 377
Target Start/End: Original strand, 11610494 - 11610561
Alignment:
Q  310 cagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgta 377  Q
    ||||| ||||||||| ||||||||| | |||  |||||||| || | |||||||||||||||||||||    
T  11610494 cagacacaacacagatactgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgta 11610561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 21479104 - 21479159
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| |||||  |||||||| |||| ||||||||| ||||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaa 21479159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 5339100 - 5339150
Alignment:
Q  329 gacacggcgacattgctaataaattgagaaaatcacataattcagtgtaaa 379  Q
    |||||| |||||||| |||||| ||||||||||||||||||| | ||||||    
T  5339100 gacacgccgacattgttaataatttgagaaaatcacataatttaatgtaaa 5339150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 372
Target Start/End: Complemental strand, 5441109 - 5441055
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    ||||||||||||||||| || ||  ||||| || |||||||||||||||||||||    
T  5441109 acacagacactgacacgccgtcaccgctaaaaatttgagaaaatcacataattca 5441055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 10954939 - 10954993
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| |||||   ||||||| |||| ||||||||||||||||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaa 10954993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 11313860 - 11313818
Alignment:
Q  336 cgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||    
T  11313860 cgacactgctaataatttgagaaaatcacataatttagtgtaa 11313818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 11658796 - 11658854
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgt 376  Q
    ||||||||||||||||  | |||| | |||||| ||||||||||| |||||||||||||    
T  11658796 acacagacactgacacaccaacatcgttaataatttgagaaaatcgcataattcagtgt 11658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 14829671 - 14829724
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    ||||||||||||||||| |||||  |||||||| |||| ||||||||||||||||    
T  14829671 acacagacactgacacgccgacacagctaataatttga-aaaatcacataattca 14829724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 26508093 - 26508151
Alignment:
Q  320 acagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| |||||||||  ||||  |||||||| |||| ||||||||||||||||||||||    
T  26508093 acagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaa 26508151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 3164120 - 3164043
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||| ||| | |||| |||| || |||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  3164120 cacggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 9624641 - 9624682
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| ||||||||||||||||||||| |||||    
T  9624641 gacactgctaataatttgagaaaatcacataattcaatgtaa 9624682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 24205136 - 24205059
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||| ||| | |||| |||||||||||| |||||  | |||||| |||||||||| ||||||| ||||||||    
T  24205136 cacggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaa 24205059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 27277897 - 27277856
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  27277897 gacactgctaataatttgagaaaatcacataatttagtgtaa 27277856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 34307875 - 34307798
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| |||   ||||||||||  |||||  ||||  |||||||| |||||||||||||||| ||||||||||    
T  34307875 cacgaacaccggacatgacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaa 34307798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 40052318 - 40052367
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    |||||||||||| |||||  |||||||| |||| ||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 11493439 - 11493379
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||| ||||||| |||||   |||||||  ||||||||||||||||||||||||||    
T  11493439 acacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaa 11493379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 16000094 - 16000034
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| |||||   ||||||| || | ||||| ||||||||||||||||    
T  16000094 acacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaa 16000034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 21720745 - 21720805
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  | |||||| ||||||| ||| |||||||||||||||    
T  21720745 acacggacactgacacgccgacaccgataataatttgagaatatctcataattcagtgtaa 21720805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 25064890 - 25064950
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||| ||||||| |||||  |||||| | |||| |||||||||||||| |||||||    
T  25064890 acacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaa 25064950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 25093483 - 25093543
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||| ||||| ||||| || |||| | |||||||||||||| ||||||||||||    
T  25093483 acactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaa 25093543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 377
Target Start/End: Complemental strand, 25652126 - 25652050
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgta 377  Q
    |||||||||||||| | |||| |||||| ||||| | |||  | |||||| |||||||||| | |||||||||||||    
T  25652126 cacgaacaccagacacgacacggacactaacacgccaacacggataataatttgagaaaatgatataattcagtgta 25652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 25948965 - 25948905
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||| | ||| |  |||||||| |||| ||||||||||||||||||||||    
T  25948965 acacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaa 25948905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 26492283 - 26492223
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||||| | ||||||||||||    
T  26492283 acacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaa 26492223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 379
Target Start/End: Complemental strand, 51206406 - 51206370
Alignment:
Q  343 gctaataaattgagaaaatcacataattcagtgtaaa 379  Q
    |||||||| |||| |||||||||||||||||||||||    
T  51206406 gctaataatttgaaaaaatcacataattcagtgtaaa 51206370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 51792 - 51852
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  51792 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 51852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 14134680 - 14134740
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||| |||||| ||||| | ||||||| |||||||||||||||||||||||||||    
T  14134680 acaccgacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaa 14134740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 24362280 - 24362220
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| |||||| |||||  |||||||| |||||| ||||||||||||||||||||    
T  24362280 acacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaa 24362220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 3025553 - 3025592
Alignment:
Q  339 cattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  3025553 cattgctaataatttgagaaaatcacataattcagtgtaa 3025592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 13844669 - 13844614
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| |||||| ||||| ||||||||| ||||||||||||||||||| |||||||    
T  13844669 gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaa 13844614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 34897071 - 34897126
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| |||||| |||||  |||||||| |||||||||||||||||||||||||||    
T  34897071 gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaa 34897126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 31236644 - 31236595
Alignment:
Q  329 gacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| ||||| ||||||||| ||||||||||||||||||||| |||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaa 31236595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 44067480 - 44067557
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| | |||| |||||||||||| |||||  | |||||| |||||||||| ||||||| ||||||||    
T  44067480 cacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaa 44067557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 20873050 - 20873110
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||| | |||||| |||| |||||||||||||| |||||||    
T  20873050 acacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaa 20873110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 39954352 - 39954297
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| |||||| |||||  |||||||| ||||||||||||||||||| |||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaa 39954297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 20679471 - 20679413
Alignment:
Q  320 acagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||| | |||||   ||||||| |||||||||||||||| ||||||||||    
T  20679471 acagacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaa 20679413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 22651957 - 22652011
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||||||||||||||    
T  22651957 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataattca 22652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 370
Target Start/End: Complemental strand, 12936570 - 12936517
Alignment:
Q  317 aacacagacactgacacggcgacattgctaataaattgagaaaatcacataatt 370  Q
    ||||| || ||||||||| |||||||| |||||| |||| ||||||||||||||    
T  12936570 aacacggatactgacacgtcgacattgttaataatttgataaaatcacataatt 12936517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 13437037 - 13436988
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    |||||||||||| |||||  |||||||| |||| ||||||||||||||||    
T  13437037 gacactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 14731712 - 14731753
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||||| ||||||||||||||||||| |||||||    
T  14731712 gacactgctaataatttgagaaaatcacataatttagtgtaa 14731753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 376
Target Start/End: Complemental strand, 18067987 - 18067954
Alignment:
Q  343 gctaataaattgagaaaatcacataattcagtgt 376  Q
    |||||||| |||||||||||||||||||||||||    
T  18067987 gctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 27213539 - 27213588
Alignment:
Q  329 gacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||| ||||| ||||||||| || |||||||||||||||||| |||||    
T  27213539 gacacgccgacactgctaataatttcagaaaatcacataattcactgtaa 27213588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Original strand, 40332191 - 40332232
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||| ||||| |||||||||||||||||||||||||||    
T  40332191 gacactgcaaataatttgagaaaatcacataattcagtgtaa 40332232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 4673503 - 4673443
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| |||||  | |||||| |||| ||||||| | ||||||||||||    
T  4673503 acacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaa 4673443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 8342960 - 8343013
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||  |||||| |||||||| |||| |||||||||||||| |||||||    
T  8342960 gacactgacac--cgacatagctaataatttgaaaaaatcacataatttagtgtaa 8343013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 8343297 - 8343357
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||| |||||  |||||| |||||||| |||| |||||||||||||| |||||||    
T  8343297 acactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaa 8343357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 24669414 - 24669474
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||||||||  ||||  | |||||| ||||| |||| ||||||||||||||||    
T  24669414 acacagacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaa 24669474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 29510382 - 29510326
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagt 374  Q
    |||| |||||||||||| |||||  |||||||| |||| ||||||||| ||||||||    
T  29510382 acacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagt 29510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 29776017 - 29776073
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagt 374  Q
    |||| |||| ||||| | ||||| ||||||||| ||||||||||||| |||||||||    
T  29776017 acacggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagt 29776073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 36450832 - 36450772
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||   ||||||| |||| ||||||||| ||||||||||||    
T  36450832 acacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaa 36450772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 41838196 - 41838144
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtg 375  Q
    |||||||||||| |||||  |||||||| || | |||||||||||||||||||    
T  41838196 gacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 6326375 - 6326315
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||| |||| ||| |||||||||| ||||||||||||||||    
T  6326375 acacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaa 6326315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 27144444 - 27144504
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| |||||  |||||||| ||||| ||||||||||||| |||||||    
T  27144444 acacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaa 27144504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 19438329 - 19438384
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||  |||||| ||| |||| |||||||||||||||||||||||||||    
T  19438329 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaa 19438384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 14674250 - 14674310
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| |||| |||||||||||||| |||||||    
T  14674250 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaa 14674310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 21191134 - 21191074
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||| | |||||  |||||||| |||| ||||||||||||||||||||||    
T  21191134 acacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 21191074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 43001781 - 43001841
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||| | ||||| ||||||||| |||| ||||| ||||||||||||||||    
T  43001781 acacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaa 43001841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 3966489 - 3966544
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||| | |||||  |||||||| |||||||||||||| ||||||||||||    
T  3966489 gacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaa 3966544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 343 - 378
Target Start/End: Complemental strand, 6471942 - 6471907
Alignment:
Q  343 gctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| |||||||||||||||||||||||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaa 6471907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 19579680 - 19579739
Alignment:
Q  316 caacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtg 375  Q
    |||||| |||||||| ||| |||||  |||||||| ||||||||||||||||||| ||||    
T  19579680 caacacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtg 19579739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 21137652 - 21137727
Alignment:
Q  300 gcacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtg 375  Q
    ||||| ||||| ||| |||||| |||||||||||| |||||| | ||||||  ||||||||| || ||||||||||    
T  21137652 gcacggacaccggacacaacacggacactgacacgccgacatcggtaataatctgagaaaatgacgtaattcagtg 21137727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 31084309 - 31084364
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| |||||  |||||||| |||| |||||||||||||||| |||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaa 31084364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 39698527 - 39698582
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||  ||||  |||||||| |||| ||||||||||||||||||||||    
T  39698527 gacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaa 39698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 6247609 - 6247663
Alignment:
Q  324 acactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||| |||||   ||||||| |||| ||||||||||||||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaa 6247663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 12927637 - 12927695
Alignment:
Q  320 acagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| |||||  |||||| |||||||| |||||||||||| |||||| |||||||    
T  12927637 acagacacggacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaa 12927695  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 378
Target Start/End: Complemental strand, 28588742 - 28588692
Alignment:
Q  328 tgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||| |||||  | |||||| |||||||||||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaa 28588692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 39205863 - 39205913
Alignment:
Q  320 acagacactgacacggcgacattgctaataaattgagaaaatcacataatt 370  Q
    |||||||| |||||| ||||| ||||||||| |||||||||||| ||||||    
T  39205863 acagacacggacacgtcgacactgctaataatttgagaaaatcatataatt 39205913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 13287494 - 13287417
Alignment:
Q  301 cacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||| ||| | |||| |||||| ||||| |||||  | |||||| |||| ||||||||||||||||||||||    
T  13287494 cacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaa 13287417  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 26716129 - 26716178
Alignment:
Q  322 agacactgacacggcgacattgctaataaattgagaaaatcacataattc 371  Q
    ||||| ||||| | ||||| ||||||||| ||||||||||||||||||||    
T  26716129 agacattgacatgccgacactgctaataatttgagaaaatcacataattc 26716178  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 26985869 - 26985918
Alignment:
Q  322 agacactgacacggcgacattgctaataaattgagaaaatcacataattc 371  Q
    ||||| ||||| | ||||| ||||||||| ||||||||||||||||||||    
T  26985869 agacattgacatgccgacactgctaataatttgagaaaatcacataattc 26985918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 378
Target Start/End: Complemental strand, 41091316 - 41091275
Alignment:
Q  337 gacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| ||||||| | |||||||||||||||||||||||||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaa 41091275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 16203873 - 16203813
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||| ||| | ||||| ||||||||| ||||||||||| ||||||| |||||||    
T  16203873 acacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaa 16203813  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 21522731 - 21522791
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| || | ||||| ||||||||||||||||    
T  21522731 acacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaa 21522791  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 21533297 - 21533357
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||||| |||||  |||||||| || | ||||| ||||||||||||||||    
T  21533297 acacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaa 21533357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 41995452 - 41995512
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| |||||   ||||||| | || |||||||||||||||| |||||    
T  41995452 acacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaa 41995512  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 92793 - 92848
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||||||| |||||  |||||||| |||||||||| ||||||||||||||||    
T  92793 gacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaa 92848  T

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Target: scaffold0306 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 13381 - 13438
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtg 375  Q
    |||| |||||||||||| |||||   ||||||| ||||||||||||||||||||||||    
T  13381 acacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 13438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 21946 - 21889
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtg 375  Q
    |||| |||||||||||| |||||   ||||||| ||||||||||||||||||||||||    
T  21946 acacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 21889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 20153 - 20213
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||| ||||||| |||||  |||||||| |||| ||||||||||||||||||||||    
T  20153 acacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 20213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 135390 - 135330
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||  ||||  ||||| ||||||||| |||||||||||||||||||| ||||||    
T  135390 acacagacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaa 135330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 263450 - 263390
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||||||||| | | ||| ||||||||| ||||||||| |||||||||||||||||    
T  263450 acacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaa 263390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 535 - 480
Alignment:
Q  323 gacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| ||| ||||| ||||||||| |||| ||||||||| ||||||||||||    
T  535 gacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaa 480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 26374 - 26428
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattca 372  Q
    ||||||||| ||||||| |||||   ||||||| |||||||||||||||||||||    
T  26374 acacagacagtgacacgtcgacaccactaataatttgagaaaatcacataattca 26428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 378
Target Start/End: Original strand, 241557 - 241635
Alignment:
Q  300 gcacgaacaccagacccaacacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| ||||| ||| | |||| |||||||||||| |||||  |||||||| |||  |||||||||||||| |||||||    
T  241557 gcacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaa 241635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 1016 - 1076
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||||||| |||||||  |||||  |||||||| |||| ||||| ||||||||||||||||    
T  1016 acacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 23401 - 23461
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||||||||||||||| |||||  | |||||| |  | ||||||||||||||||||||||    
T  23401 acacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaa 23461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 378
Target Start/End: Original strand, 53189 - 53221
Alignment:
Q  346 aataaattgagaaaatcacataattcagtgtaa 378  Q
    ||||| |||||||||||||||||||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaa 53221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 46663 - 46723
Alignment:
Q  318 acacagacactgacacggcgacattgctaataaattgagaaaatcacataattcagtgtaa 378  Q
    |||| |||| ||||||| |||||  | |||||| |||| ||||||||||||||||||||||    
T  46663 acacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaa 46723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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