View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11883_high_11 (Length: 289)

Name: NF11883_high_11
Description: NF11883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11883_high_11
NF11883_high_11
[»] chr3 (26 HSPs)
chr3 (4-278)||(29369876-29370150)
chr3 (1-35)||(35011946-35011980)
chr3 (1-35)||(44574018-44574052)
chr3 (1-35)||(50692608-50692642)
chr3 (1-34)||(4029633-4029666)
chr3 (1-34)||(4256001-4256034)
chr3 (1-34)||(9264075-9264108)
chr3 (1-34)||(9264282-9264315)
chr3 (1-34)||(21750557-21750590)
chr3 (1-34)||(21832188-21832221)
chr3 (1-34)||(22339823-22339856)
chr3 (1-34)||(22407430-22407463)
chr3 (1-34)||(22407637-22407670)
chr3 (1-34)||(26366813-26366846)
chr3 (1-34)||(35011739-35011772)
chr3 (1-34)||(44573721-44573754)
chr3 (1-34)||(48685301-48685334)
chr3 (1-34)||(50057111-50057144)
chr3 (1-34)||(50057241-50057274)
chr3 (1-34)||(50057371-50057404)
chr3 (1-34)||(50203846-50203879)
chr3 (1-34)||(50692405-50692438)
chr3 (1-34)||(51338392-51338425)
chr3 (1-34)||(51642417-51642450)
chr3 (1-34)||(51642624-51642657)
chr3 (1-37)||(11414445-11414481)
[»] chr8 (14 HSPs)
chr8 (1-34)||(30176453-30176486)
chr8 (1-35)||(31767062-31767096)
chr8 (1-34)||(7621976-7622009)
chr8 (1-34)||(10989023-10989056)
chr8 (1-34)||(10989230-10989263)
chr8 (1-34)||(16454624-16454657)
chr8 (1-34)||(18905938-18905971)
chr8 (1-34)||(20760649-20760682)
chr8 (1-34)||(30066064-30066097)
chr8 (1-34)||(32931483-32931516)
chr8 (1-34)||(36997248-36997281)
chr8 (1-34)||(43599393-43599426)
chr8 (1-34)||(43599554-43599587)
chr8 (1-34)||(43984305-43984338)
[»] chr2 (11 HSPs)
chr2 (1-37)||(32667265-32667301)
chr2 (1-35)||(20998977-20999011)
chr2 (1-35)||(33985759-33985793)
chr2 (1-39)||(34775439-34775477)
chr2 (1-34)||(21214190-21214223)
chr2 (1-34)||(23054408-23054441)
chr2 (1-34)||(25621274-25621307)
chr2 (1-34)||(29923380-29923413)
chr2 (1-34)||(31761214-31761247)
chr2 (1-34)||(42768323-42768356)
chr2 (1-34)||(43195866-43195899)
[»] chr7 (10 HSPs)
chr7 (1-35)||(6783120-6783154)
chr7 (1-35)||(41670915-41670949)
chr7 (1-34)||(1663593-1663626)
chr7 (1-34)||(13310414-13310447)
chr7 (1-34)||(23396691-23396724)
chr7 (1-34)||(23821665-23821698)
chr7 (1-34)||(31374847-31374880)
chr7 (1-34)||(33855567-33855600)
chr7 (1-37)||(1661177-1661213)
chr7 (1-29)||(36092386-36092414)
[»] chr6 (13 HSPs)
chr6 (1-35)||(12134471-12134505)
chr6 (1-35)||(24558870-24558904)
chr6 (1-35)||(28149875-28149909)
chr6 (1-34)||(1744831-1744864)
chr6 (1-34)||(11313371-11313404)
chr6 (1-34)||(15101100-15101133)
chr6 (1-34)||(16876819-16876852)
chr6 (1-34)||(16876999-16877032)
chr6 (1-34)||(19712393-19712426)
chr6 (1-34)||(21089152-21089185)
chr6 (1-34)||(24055098-24055131)
chr6 (1-34)||(26098424-26098457)
chr6 (1-33)||(12124694-12124726)
[»] chr5 (14 HSPs)
chr5 (1-35)||(24994151-24994185)
chr5 (1-34)||(48300-48333)
chr5 (1-34)||(873685-873718)
chr5 (1-34)||(2908758-2908791)
chr5 (1-34)||(3762988-3763021)
chr5 (1-34)||(12965235-12965268)
chr5 (1-34)||(13413666-13413699)
chr5 (1-34)||(13843779-13843812)
chr5 (1-34)||(34457178-34457211)
chr5 (1-34)||(34457385-34457418)
chr5 (1-34)||(38131846-38131879)
chr5 (1-34)||(40168848-40168881)
chr5 (1-34)||(40169030-40169063)
chr5 (1-34)||(43490452-43490485)
[»] chr4 (24 HSPs)
chr4 (1-35)||(27048125-27048159)
chr4 (1-35)||(29113531-29113565)
chr4 (1-35)||(29669351-29669385)
chr4 (1-34)||(990629-990662)
chr4 (1-34)||(12016672-12016705)
chr4 (1-34)||(12016880-12016913)
chr4 (1-34)||(23018552-23018585)
chr4 (1-34)||(28245870-28245903)
chr4 (1-34)||(28395259-28395292)
chr4 (1-34)||(36558455-36558488)
chr4 (1-34)||(43943755-43943788)
chr4 (1-34)||(45427241-45427274)
chr4 (1-34)||(50858094-50858127)
chr4 (1-34)||(50858407-50858440)
chr4 (1-34)||(51470565-51470598)
chr4 (1-34)||(51470726-51470759)
chr4 (1-34)||(52214697-52214730)
chr4 (1-34)||(53740264-53740297)
chr4 (1-34)||(56511379-56511412)
chr4 (1-34)||(56511586-56511619)
chr4 (1-33)||(400373-400405)
chr4 (2-34)||(1923185-1923217)
chr4 (1-33)||(43972437-43972469)
chr4 (1-33)||(45426926-45426958)
[»] chr1 (17 HSPs)
chr1 (1-35)||(2997044-2997078)
chr1 (1-34)||(4022114-4022147)
chr1 (1-34)||(9380982-9381015)
chr1 (1-34)||(9381181-9381214)
chr1 (1-34)||(12314453-12314486)
chr1 (1-34)||(15392186-15392219)
chr1 (1-34)||(19481381-19481414)
chr1 (1-34)||(19937032-19937065)
chr1 (1-34)||(20735604-20735637)
chr1 (1-34)||(21638255-21638288)
chr1 (1-34)||(25799266-25799299)
chr1 (1-34)||(29273055-29273088)
chr1 (1-34)||(29273214-29273247)
chr1 (1-34)||(33879767-33879800)
chr1 (1-34)||(33964455-33964488)
chr1 (1-34)||(35926237-35926270)
chr1 (1-33)||(15392107-15392139)
[»] scaffold0989 (1 HSPs)
scaffold0989 (1-34)||(2936-2969)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-34)||(13388-13421)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-37)||(20622-20658)


Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-147; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 4 - 278
Target Start/End: Original strand, 29369876 - 29370150
Alignment:
Q  4 gtaaggatgagttaggccccgaatttcaacaggatgtacccccaatttgtttcactatttatgcctaaccacgattcccataaagtataatccatgtttg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29369876 gtaaggatgagttaggccccgaatttcaacaggatgtacccccaatttgtttcactatttatgcctaaccacgattcccataaagtataatccatgtttg 29369975  T
Q  104 ttttcagattaggatgatgtctaaatatttttaccttttaaattgaatatttgatatttcacgaagcagataatagccgacaatggttgtataaaatgtg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29369976 ttttcagattaggatgatgtctaaatatttttaccttttaaattgaatatttgatatttcacgaagcagataatagctgacaatggttgtataaaatgtg 29370075  T
Q  204 attttggctaatttcaaatcatgtgtttataaatatgttggattgactttctacacatacattctcacaggttct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  29370076 attttggctaatttcaaatcatgtgtttataaatatgttggattgactttctacacatacacgctcacaggttct 29370150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 35011946 - 35011980
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  35011946 tttgtaaggatgagttaggccccaaatttcaacag 35011980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 44574018 - 44574052
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  44574018 tttgtaaggatgagttaggccccaaatttcaacag 44574052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 50692608 - 50692642
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  50692608 tttgtaaggatgagttaggccccaaatttcaacag 50692642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4029666 - 4029633
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  4029666 tttgtaaggatgagttaggccccaaatttcaaca 4029633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4256001 - 4256034
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  4256001 tttgtaaggatgagttaggccccaaatttcaaca 4256034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9264108 - 9264075
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  9264108 tttgtaaggatgagttaggccccaaatttcaaca 9264075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9264315 - 9264282
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  9264315 tttgtaaggatgagttaggccccaaatttcaaca 9264282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21750557 - 21750590
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  21750557 tttgtaaggatgagttaggccccaaatttcaaca 21750590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21832221 - 21832188
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  21832221 tttgtaaggatgagttaggccccaaatttcaaca 21832188  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22339823 - 22339856
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  22339823 tttgtaaggatgagttaggcccccaatttcaaca 22339856  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22407463 - 22407430
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  22407463 tttgtaaggatgagttaggccccaaatttcaaca 22407430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22407670 - 22407637
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  22407670 tttgtaaggatgagttaggccccaaatttcaaca 22407637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26366813 - 26366846
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  26366813 tttgtaaggatgagttaggcccccaatttcaaca 26366846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 35011739 - 35011772
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  35011739 tttgtaaggatgagttaggccccaaatttcaaca 35011772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 44573721 - 44573754
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  44573721 tttgtaaggatgagttaggccccaaatttcaaca 44573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48685334 - 48685301
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  48685334 tttgtaaggatgagttaggccccaaatttcaaca 48685301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 50057111 - 50057144
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  50057111 tttgtaaggatgagttaggccccaaatttcaaca 50057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 50057241 - 50057274
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  50057241 tttgtaaggatgagttaggccccaaatttcaaca 50057274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 50057371 - 50057404
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  50057371 tttgtaaggatgagttaggccccaaatttcaaca 50057404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 50203879 - 50203846
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  50203879 tttgtaaggatgagttaggccccaaatttcaaca 50203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 50692405 - 50692438
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  50692405 tttgtaaggatgagttaggccccaaatttcaaca 50692438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51338425 - 51338392
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  51338425 tttgtaaggatgagttaggccccaaatttcaaca 51338392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51642450 - 51642417
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  51642450 tttgtaaggatgagttaggccccaaatttcaaca 51642417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51642657 - 51642624
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  51642657 tttgtaaggatgagttaggccccaaatttcaaca 51642624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 11414445 - 11414481
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacagga 37  Q
    ||||||||||||||||||||| | |||||||||||||    
T  11414445 tttgtaaggatgagttaggcctcaaatttcaacagga 11414481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 30176486 - 30176453
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  30176486 tttgtaaggatgagttaggccccgaatttcaaca 30176453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 31767062 - 31767096
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  31767062 tttgtaaggatgagttaggccccaaatttcaacag 31767096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7621976 - 7622009
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  7621976 tttgtaaggatgagttaggccccaaatttcaaca 7622009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10989056 - 10989023
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  10989056 tttgtaaggatgagttaggccccaaatttcaaca 10989023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10989263 - 10989230
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  10989263 tttgtaaggatgagttaggccccaaatttcaaca 10989230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16454657 - 16454624
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  16454657 tttgtaaggatgagttaggccccaaatttcaaca 16454624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18905938 - 18905971
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  18905938 tttgtaaggatgagttaggccccaaatttcaaca 18905971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 20760682 - 20760649
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  20760682 tttgtaaggatgagttaggccccaaatttcaaca 20760649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30066064 - 30066097
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  30066064 tttgtaaggatgagttaggccccaaatttcaaca 30066097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 32931483 - 32931516
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  32931483 tttgtaaggatgagttaggccccaaatttcaaca 32931516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36997248 - 36997281
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  36997248 tttgtaaggatgagttaggccccaaatttcaaca 36997281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43599393 - 43599426
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  43599393 tttgtaaggatgagttaggccccaaatttcaaca 43599426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43599554 - 43599587
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  43599554 tttgtaaggatgagttaggccccaaatttcaaca 43599587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43984338 - 43984305
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  43984338 tttgtaaggatgagttaggccccaaatttcaaca 43984305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32667265 - 32667301
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacagga 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  32667265 tttgtaaggatgagttaggccccaaatttcaacagga 32667301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 20999011 - 20998977
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  20999011 tttgtaaggatgagttaggcccccaatttcaacag 20998977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 33985793 - 33985759
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  33985793 tttgtaaggatgagttaggccccaaatttcaacag 33985759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34775439 - 34775477
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacaggatg 39  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  34775439 tttgtaaggatgagttaggcccccaatttcaacaagatg 34775477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21214223 - 21214190
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  21214223 tttgtaaggatgagttaggccccaaatttcaaca 21214190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 23054408 - 23054441
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  23054408 tttgtaaggatgagttaggccccaaatttcaaca 23054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25621307 - 25621274
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  25621307 tttgtaaggatgagttaggcccccaatttcaaca 25621274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29923380 - 29923413
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  29923380 tttgtaaggatgagttaggccccaaatttcaaca 29923413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31761214 - 31761247
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  31761214 tttgtaaggatgagttaggccccaaatttcaaca 31761247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42768356 - 42768323
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  42768356 tttgtaaggatgagttaggccccaaatttcaaca 42768323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43195866 - 43195899
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  43195866 tttgtaaggatgagttaggccccaaatttcaaca 43195899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 31; Significance: 0.00000003; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 6783120 - 6783154
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  6783120 tttgtaaggatgagttaggccccaaatttcaacag 6783154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 41670915 - 41670949
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  41670915 tttgtaaggatgagttaggccccaaatttcaacag 41670949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1663626 - 1663593
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  1663626 tttgtaaggatgagttaggccccaaatttcaaca 1663593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13310447 - 13310414
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  13310447 tttgtaaggatgagttaggccccaaatttcaaca 13310414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 23396691 - 23396724
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  23396691 tttgtaaggatgagttaggccccaaatttcaaca 23396724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23821698 - 23821665
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  23821698 tttgtaaggatgagttaggccccaaatttcaaca 23821665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31374847 - 31374880
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    |||||||||||||||||| |||||||||||||||    
T  31374847 tttgtaaggatgagttagaccccgaatttcaaca 31374880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33855567 - 33855600
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  33855567 tttgtaaggatgagttaggccccaaatttcaaca 33855600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1661213 - 1661177
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacagga 37  Q
    |||||||| |||||||||||||| |||||||||||||    
T  1661213 tttgtaagaatgagttaggccccaaatttcaacagga 1661177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 36092414 - 36092386
Alignment:
Q  1 tttgtaaggatgagttaggccccgaattt 29  Q
    |||||||||||||||||||||||||||||    
T  36092414 tttgtaaggatgagttaggccccgaattt 36092386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 12134505 - 12134471
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  12134505 tttgtaaggatgagttaggccccaaatttcaacag 12134471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24558870 - 24558904
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  24558870 tttgtaaggatgagttaggccccaaatttcaacag 24558904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 28149875 - 28149909
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  28149875 tttgtaaggatgagttaggccccaaatttcaacag 28149909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1744864 - 1744831
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  1744864 tttgtaaggatgagttaggccccaaatttcaaca 1744831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11313404 - 11313371
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  11313404 tttgtaaggatgagttaggccccaaatttcaaca 11313371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15101133 - 15101100
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  15101133 tttgtaaggatgagttaggcccccaatttcaaca 15101100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16876852 - 16876819
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  16876852 tttgtaaggatgagttaggccccaaatttcaaca 16876819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16877032 - 16876999
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  16877032 tttgtaaggatgagttaggccccaaatttcaaca 16876999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19712426 - 19712393
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  19712426 tttgtaaggatgagttaggccccaaatttcaaca 19712393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21089185 - 21089152
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  21089185 tttgtaaggatgagttaggccccaaatttcaaca 21089152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24055131 - 24055098
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  24055131 tttgtaaggatgagttaggccccaaatttcaaca 24055098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26098424 - 26098457
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  26098424 tttgtaaggatgagttaggccccaaatttcaaca 26098457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12124726 - 12124694
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaac 33  Q
    ||||||||||||||||||||||| |||||||||    
T  12124726 tttgtaaggatgagttaggccccaaatttcaac 12124694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24994151 - 24994185
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  24994151 tttgtaaggatgagttaggccccaaatttcaacag 24994185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48333 - 48300
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  48333 tttgtaaggatgagttaggcccccaatttcaaca 48300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 873718 - 873685
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  873718 tttgtaaggatgagttaggccccaaatttcaaca 873685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2908791 - 2908758
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  2908791 tttgtaaggatgagttaggccccaaatttcaaca 2908758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3762988 - 3763021
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  3762988 tttgtaaggatgagttaggccccaaatttcaaca 3763021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12965268 - 12965235
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  12965268 tttgtaaggatgagttaggccccaaatttcaaca 12965235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13413666 - 13413699
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  13413666 tttgtaaggatgagttaggccccaaatttcaaca 13413699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13843779 - 13843812
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  13843779 tttgtaaggatgagttaggccccaaatttcaaca 13843812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34457178 - 34457211
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  34457178 tttgtaaggatgagttaggccccaaatttcaaca 34457211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34457385 - 34457418
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  34457385 tttgtaaggatgagttaggccccaaatttcaaca 34457418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 38131846 - 38131879
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  38131846 tttgtaaggatgagttaggccccaaatttcaaca 38131879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40168881 - 40168848
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  40168881 tttgtaaggatgagttaggccccaaatttcaaca 40168848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40169063 - 40169030
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  40169063 tttgtaaggatgagttaggccccaaatttcaaca 40169030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43490485 - 43490452
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  43490485 tttgtaaggatgagttaggcccccaatttcaaca 43490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000003; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 27048159 - 27048125
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  27048159 tttgtaaggatgagttaggccccaaatttcaacag 27048125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 29113531 - 29113565
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  29113531 tttgtaaggatgagttaggccccaaatttcaacag 29113565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 29669385 - 29669351
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  29669385 tttgtaaggatgagttaggccccaaatttcaacag 29669351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 990629 - 990662
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  990629 tttgtaaggatgagttaggccccaaatttcaaca 990662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12016705 - 12016672
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  12016705 tttgtaaggatgagttaggcccccaatttcaaca 12016672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12016913 - 12016880
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  12016913 tttgtaaggatgagttaggcccccaatttcaaca 12016880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 23018552 - 23018585
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  23018552 tttgtaaggatgagttaggccccaaatttcaaca 23018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28245870 - 28245903
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  28245870 tttgtaaggatgagttaggcccccaatttcaaca 28245903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28395259 - 28395292
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  28395259 tttgtaaggatgagttaggccccaaatttcaaca 28395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 36558488 - 36558455
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  36558488 tttgtaaggatgagttaggccccaaatttcaaca 36558455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43943755 - 43943788
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  43943755 tttgtaaggatgagttaggcccccaatttcaaca 43943788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 45427274 - 45427241
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  45427274 tttgtaaggatgagttaggccccaaatttcaaca 45427241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 50858094 - 50858127
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  50858094 tttgtaaggatgagttaggccccaaatttcaaca 50858127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 50858407 - 50858440
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  50858407 tttgtaaggatgagttaggccccaaatttcaaca 50858440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 51470565 - 51470598
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  51470565 tttgtaaggatgagttaggccccaaatttcaaca 51470598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 51470726 - 51470759
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  51470726 tttgtaaggatgagttaggccccaaatttcaaca 51470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 52214697 - 52214730
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  52214697 tttgtaaggatgagttaggccccaaatttcaaca 52214730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 53740264 - 53740297
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  53740264 tttgtaaggatgagttaggccccaaatttcaaca 53740297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 56511379 - 56511412
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  56511379 tttgtaaggatgagttaggccccaaatttcaaca 56511412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 56511586 - 56511619
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  56511586 tttgtaaggatgagttaggccccaaatttcaaca 56511619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 400405 - 400373
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaac 33  Q
    ||||||||||||||||||||||| |||||||||    
T  400405 tttgtaaggatgagttaggccccaaatttcaac 400373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 1923217 - 1923185
Alignment:
Q  2 ttgtaaggatgagttaggccccgaatttcaaca 34  Q
    |||||||||||||||||||||| ||||||||||    
T  1923217 ttgtaaggatgagttaggccccaaatttcaaca 1923185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43972437 - 43972469
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaac 33  Q
    ||||||||||||||||||||||| |||||||||    
T  43972437 tttgtaaggatgagttaggccccaaatttcaac 43972469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 45426958 - 45426926
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaac 33  Q
    ||||||||||||||||||||||| |||||||||    
T  45426958 tttgtaaggatgagttaggccccaaatttcaac 45426926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 2997078 - 2997044
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacag 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  2997078 tttgtaaggatgagttaggccccaaatttcaacag 2997044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4022147 - 4022114
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  4022147 tttgtaaggatgagttaggccccaaatttcaaca 4022114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 9380982 - 9381015
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  9380982 tttgtaaggatgagttaggccccaaatttcaaca 9381015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 9381181 - 9381214
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  9381181 tttgtaaggatgagttaggccccaaatttcaaca 9381214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12314453 - 12314486
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    |||||||||||||||||||||| |||||||||||    
T  12314453 tttgtaaggatgagttaggccctgaatttcaaca 12314486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15392186 - 15392219
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  15392186 tttgtaaggatgagttaggccccaaatttcaaca 15392219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19481414 - 19481381
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  19481414 tttgtaaggatgagttaggccccaaatttcaaca 19481381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19937065 - 19937032
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    |||||||||||||||||||| |||||||||||||    
T  19937065 tttgtaaggatgagttaggcaccgaatttcaaca 19937032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20735604 - 20735637
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  20735604 tttgtaaggatgagttaggccccaaatttcaaca 20735637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21638288 - 21638255
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  21638288 tttgtaaggatgagttaggccccaaatttcaaca 21638255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25799266 - 25799299
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  25799266 tttgtaaggatgagttaggccccaaatttcaaca 25799299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29273088 - 29273055
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  29273088 tttgtaaggatgagttaggccccaaatttcaaca 29273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29273247 - 29273214
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  29273247 tttgtaaggatgagttaggccccaaatttcaaca 29273214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33879800 - 33879767
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  33879800 tttgtaaggatgagttaggccccaaatttcaaca 33879767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33964455 - 33964488
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  33964455 tttgtaaggatgagttaggccccaaatttcaaca 33964488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35926270 - 35926237
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  35926270 tttgtaaggatgagttaggccccaaatttcaaca 35926237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15392107 - 15392139
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaac 33  Q
    ||||||||||||||||||||||| |||||||||    
T  15392107 tttgtaaggatgagttaggccccaaatttcaac 15392139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2969 - 2936
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  2969 tttgtaaggatgagttaggccccaaatttcaaca 2936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13388 - 13421
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaaca 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  13388 tttgtgaggatgagttaggccccgaatttcaaca 13421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20622 - 20658
Alignment:
Q  1 tttgtaaggatgagttaggccccgaatttcaacagga 37  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  20622 tttgtaaggatgagttaggccccaaattacaacagga 20658  T

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