View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11885_high_30 (Length: 321)
Name: NF11885_high_30
Description: NF11885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11885_high_30 |
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Alignment Details
Target: chr2 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 32699999 - 32700314
Alignment:
| Q |
1 |
taaaaataaaacagttgagttcaacagaaaacaaaatggaccacataagagggagggtgtactcaatggatagagtagagcacatcaccacatcaaaaat |
100 |
Q |
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||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
32699999 |
taaaaataaaacatttgagttcaatagaaaacaaaatggaccacagaagagggagggtgtactcaatggatagagtagagtacatcaccacatcaaaaat |
32700098 |
T |
|
| Q |
101 |
aaaataagggaaggtgaaaagtatagcataataagtgccaaggtatattctttgtttatctcttttccctttttccccatcaaataggacatagaaagat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |
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| T |
32700099 |
aaaataagggaaggtgaaaagtatagcataataagtgccaaggtatattctttgtttatctcttttccctttttctccatcaaatagcacatagaaagat |
32700198 |
T |
|
| Q |
201 |
gacacaacaatattgaagtagggtccatctcctctcagccgcaattaaatgattaacatgggacttcacttttttctcaaatcctctcattcctccttcc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
32700199 |
gacacaacaatattgaagtagggtccatctcctctcagccgcaattaaatgattaacatgggacttcac-tttttctcaaatcctctcattcctccttcc |
32700297 |
T |
|
| Q |
301 |
tcaggcctatgctactc |
317 |
Q |
| |
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|||||||| ||||||| |
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| T |
32700298 |
tcaggccttagctactc |
32700314 |
T |
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