View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11885_high_33 (Length: 290)

Name: NF11885_high_33
Description: NF11885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11885_high_33
NF11885_high_33
[»] chr7 (34 HSPs)
chr7 (27-160)||(26633293-26633426)
chr7 (27-159)||(7366618-7366750)
chr7 (27-160)||(36438352-36438485)
chr7 (27-162)||(9479055-9479190)
chr7 (29-156)||(40737994-40738121)
chr7 (27-161)||(18895398-18895532)
chr7 (27-160)||(26282543-26282676)
chr7 (27-160)||(40001697-40001830)
chr7 (27-160)||(32956704-32956838)
chr7 (27-160)||(33909993-33910127)
chr7 (27-160)||(1365939-1366072)
chr7 (28-157)||(42311943-42312071)
chr7 (27-160)||(36796373-36796507)
chr7 (27-152)||(18015583-18015708)
chr7 (29-160)||(30739052-30739184)
chr7 (27-148)||(41908119-41908241)
chr7 (27-160)||(44894030-44894164)
chr7 (27-148)||(6380085-6380206)
chr7 (27-88)||(4099970-4100031)
chr7 (27-88)||(7636327-7636388)
chr7 (27-88)||(46221704-46221765)
chr7 (36-147)||(25061846-25061957)
chr7 (27-125)||(773885-773983)
chr7 (27-81)||(12251289-12251343)
chr7 (27-88)||(11672588-11672649)
chr7 (27-157)||(8358295-8358426)
chr7 (30-162)||(33419121-33419255)
chr7 (31-88)||(42161125-42161182)
chr7 (177-278)||(7366504-7366604)
chr7 (27-79)||(44876156-44876208)
chr7 (28-162)||(41852302-41852434)
chr7 (27-99)||(3799761-3799833)
chr7 (177-209)||(40738143-40738175)
chr7 (92-152)||(40841312-40841372)
[»] chr1 (40 HSPs)
chr1 (27-160)||(17674355-17674487)
chr1 (27-153)||(22386838-22386964)
chr1 (27-160)||(24556736-24556869)
chr1 (27-160)||(37873763-37873897)
chr1 (27-155)||(42740045-42740173)
chr1 (30-150)||(38263804-38263924)
chr1 (31-145)||(44836726-44836840)
chr1 (27-160)||(12971336-12971469)
chr1 (27-160)||(27703530-27703663)
chr1 (27-144)||(50371080-50371197)
chr1 (27-100)||(13120867-13120940)
chr1 (27-161)||(15441219-15441354)
chr1 (27-148)||(10109662-10109783)
chr1 (68-160)||(26486407-26486499)
chr1 (27-160)||(5560413-5560546)
chr1 (27-160)||(12884138-12884272)
chr1 (27-148)||(6150663-6150784)
chr1 (27-103)||(33124631-33124707)
chr1 (27-160)||(50552424-50552558)
chr1 (27-88)||(18127938-18127999)
chr1 (27-148)||(30899598-30899719)
chr1 (98-278)||(13121749-13121925)
chr1 (27-160)||(25930532-25930667)
chr1 (27-160)||(1269489-1269614)
chr1 (27-148)||(17487284-17487405)
chr1 (27-88)||(48722371-48722432)
chr1 (27-160)||(20905288-20905423)
chr1 (69-152)||(31369432-31369515)
chr1 (30-148)||(14084705-14084823)
chr1 (27-148)||(29208099-29208220)
chr1 (27-89)||(30004908-30004970)
chr1 (27-81)||(51110102-51110156)
chr1 (27-81)||(52055561-52055615)
chr1 (27-88)||(9-70)
chr1 (33-89)||(3907472-3907528)
chr1 (27-88)||(28885672-28885733)
chr1 (45-88)||(32810370-32810413)
chr1 (27-116)||(9777387-9777477)
chr1 (177-278)||(22386985-22387085)
chr1 (27-79)||(6333517-6333569)
[»] chr2 (33 HSPs)
chr2 (27-163)||(13997241-13997377)
chr2 (27-160)||(39081328-39081461)
chr2 (27-157)||(29480638-29480768)
chr2 (27-160)||(1418840-1418972)
chr2 (27-156)||(36059906-36060035)
chr2 (27-154)||(38599338-38599465)
chr2 (27-160)||(19367420-19367554)
chr2 (27-160)||(15457430-15457563)
chr2 (27-160)||(21747231-21747364)
chr2 (27-152)||(27302529-27302654)
chr2 (27-160)||(38985710-38985842)
chr2 (27-148)||(41096539-41096660)
chr2 (27-160)||(42411559-42411692)
chr2 (27-157)||(2063738-2063868)
chr2 (27-148)||(6530601-6530722)
chr2 (27-152)||(7993570-7993695)
chr2 (27-160)||(34061857-34061990)
chr2 (28-152)||(31273168-31273291)
chr2 (27-148)||(13020365-13020486)
chr2 (27-160)||(18676312-18676446)
chr2 (27-148)||(26151748-26151870)
chr2 (27-148)||(45042331-45042455)
chr2 (27-160)||(18172941-18173073)
chr2 (31-160)||(18916059-18916188)
chr2 (82-154)||(32186206-32186278)
chr2 (27-157)||(45618909-45619039)
chr2 (27-88)||(4855995-4856056)
chr2 (27-160)||(1226267-1226399)
chr2 (27-72)||(17117646-17117691)
chr2 (27-88)||(25222325-25222386)
chr2 (27-119)||(18482507-18482600)
chr2 (27-72)||(42759757-42759802)
chr2 (177-209)||(36060058-36060090)
[»] chr5 (28 HSPs)
chr5 (27-157)||(17325777-17325908)
chr5 (27-159)||(138075-138207)
chr5 (27-160)||(16515454-16515587)
chr5 (27-148)||(20975927-20976048)
chr5 (27-160)||(42291882-42292015)
chr5 (27-160)||(43511548-43511681)
chr5 (30-147)||(10033489-10033607)
chr5 (27-160)||(3349730-3349862)
chr5 (27-152)||(4734583-4734708)
chr5 (27-160)||(10591274-10591407)
chr5 (27-158)||(40956245-40956376)
chr5 (27-160)||(5829315-5829446)
chr5 (35-157)||(27351282-27351404)
chr5 (27-127)||(18873416-18873520)
chr5 (27-160)||(13656137-13656273)
chr5 (27-160)||(17513937-17514070)
chr5 (27-160)||(29156120-29156253)
chr5 (27-152)||(40779130-40779254)
chr5 (27-88)||(19099315-19099376)
chr5 (27-148)||(26377775-26377896)
chr5 (27-160)||(13474559-13474693)
chr5 (27-88)||(12661311-12661372)
chr5 (27-88)||(13423866-13423927)
chr5 (29-148)||(36718570-36718689)
chr5 (27-86)||(7390401-7390460)
chr5 (59-116)||(931354-931411)
chr5 (34-87)||(33281677-33281730)
chr5 (45-89)||(37029051-37029095)
[»] chr4 (25 HSPs)
chr4 (27-160)||(35653981-35654114)
chr4 (27-160)||(22423614-22423747)
chr4 (27-159)||(43154789-43154921)
chr4 (27-160)||(24449054-24449189)
chr4 (27-152)||(21791548-21791673)
chr4 (27-158)||(5545261-5545392)
chr4 (27-152)||(32130791-32130916)
chr4 (27-160)||(45172646-45172778)
chr4 (27-160)||(19661309-19661442)
chr4 (27-148)||(23426167-23426288)
chr4 (27-160)||(34982154-34982287)
chr4 (27-160)||(55134138-55134271)
chr4 (27-153)||(10575524-10575647)
chr4 (31-160)||(27632327-27632457)
chr4 (27-148)||(28463589-28463710)
chr4 (27-88)||(41038252-41038313)
chr4 (27-160)||(53011642-53011775)
chr4 (27-147)||(29579823-29579943)
chr4 (27-160)||(11681743-11681878)
chr4 (27-160)||(11690022-11690157)
chr4 (27-88)||(44478041-44478102)
chr4 (36-118)||(16072566-16072648)
chr4 (27-152)||(23256532-23256657)
chr4 (27-148)||(29221622-29221743)
chr4 (177-209)||(22423567-22423599)
[»] chr3 (32 HSPs)
chr3 (27-160)||(36538187-36538320)
chr3 (27-160)||(51146867-51147000)
chr3 (27-160)||(7766991-7767126)
chr3 (27-159)||(42009263-42009395)
chr3 (27-159)||(27303118-27303250)
chr3 (27-159)||(50677315-50677447)
chr3 (27-160)||(46904662-46904805)
chr3 (27-160)||(48627030-48627163)
chr3 (27-158)||(51939557-51939688)
chr3 (27-160)||(41707056-41707190)
chr3 (27-160)||(21784785-21784918)
chr3 (27-160)||(23164573-23164706)
chr3 (27-148)||(25599087-25599208)
chr3 (35-160)||(54430482-54430607)
chr3 (27-160)||(46791698-46791832)
chr3 (27-160)||(21596265-21596398)
chr3 (27-148)||(28132736-28132857)
chr3 (27-159)||(52655124-52655257)
chr3 (27-148)||(13401401-13401522)
chr3 (27-160)||(18408121-18408254)
chr3 (27-160)||(8364101-8364235)
chr3 (27-160)||(29387755-29387889)
chr3 (27-160)||(40152130-40152264)
chr3 (30-119)||(19965884-19965973)
chr3 (27-148)||(24252563-24252683)
chr3 (38-150)||(1649843-1649955)
chr3 (45-161)||(43905862-43905978)
chr3 (27-160)||(27729770-27729904)
chr3 (31-148)||(23067730-23067847)
chr3 (33-119)||(1255057-1255143)
chr3 (27-87)||(20762052-20762112)
chr3 (177-209)||(46904612-46904644)
[»] chr8 (23 HSPs)
chr8 (27-160)||(3628748-3628881)
chr8 (27-160)||(35874854-35874989)
chr8 (27-160)||(32098179-32098312)
chr8 (27-160)||(34523952-34524085)
chr8 (27-160)||(39697939-39698072)
chr8 (27-152)||(5869323-5869446)
chr8 (27-160)||(23567275-23567408)
chr8 (27-148)||(43926324-43926445)
chr8 (27-118)||(3471572-3471663)
chr8 (27-160)||(18420610-18420744)
chr8 (27-160)||(12531489-12531622)
chr8 (27-160)||(43968071-43968205)
chr8 (27-88)||(18112118-18112179)
chr8 (27-160)||(13585228-13585362)
chr8 (27-88)||(1004060-1004122)
chr8 (27-148)||(30915288-30915410)
chr8 (27-118)||(27074546-27074637)
chr8 (27-107)||(36515157-36515229)
chr8 (27-160)||(7858014-7858148)
chr8 (31-88)||(42951774-42951831)
chr8 (27-148)||(44665047-44665168)
chr8 (33-151)||(42076046-42076165)
chr8 (27-89)||(29372358-29372420)
[»] chr6 (27 HSPs)
chr6 (27-148)||(30915367-30915488)
chr6 (27-148)||(3748569-3748690)
chr6 (71-160)||(7341139-7341228)
chr6 (27-160)||(12614717-12614850)
chr6 (27-160)||(2618285-2618418)
chr6 (27-146)||(628096-628215)
chr6 (27-160)||(6360690-6360822)
chr6 (27-160)||(29308468-29308601)
chr6 (27-160)||(31860933-31861064)
chr6 (27-159)||(19231544-19231675)
chr6 (27-160)||(1690634-1690767)
chr6 (27-152)||(1093042-1093166)
chr6 (81-160)||(6294209-6294288)
chr6 (27-126)||(14893418-14893517)
chr6 (27-160)||(57617-57751)
chr6 (27-152)||(6754144-6754269)
chr6 (27-160)||(7525167-7525301)
chr6 (27-81)||(29401149-29401203)
chr6 (27-148)||(29149345-29149466)
chr6 (27-160)||(3514851-3514985)
chr6 (35-81)||(22503752-22503798)
chr6 (27-119)||(350385-350478)
chr6 (27-88)||(21946109-21946170)
chr6 (45-141)||(31234862-31234956)
chr6 (27-65)||(6294279-6294317)
chr6 (45-89)||(1327594-1327638)
chr6 (177-209)||(7341094-7341126)
[»] scaffold0126 (1 HSPs)
scaffold0126 (29-160)||(16639-16771)
[»] scaffold0606 (1 HSPs)
scaffold0606 (30-152)||(8399-8521)
[»] scaffold0181 (1 HSPs)
scaffold0181 (27-88)||(17133-17194)
[»] scaffold0100 (1 HSPs)
scaffold0100 (27-148)||(46174-46295)
[»] scaffold0035 (1 HSPs)
scaffold0035 (30-65)||(22809-22844)
[»] scaffold0564 (1 HSPs)
scaffold0564 (27-65)||(1086-1124)


Alignment Details
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 26633426 - 26633293
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||    
T  26633426 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgatggtggttttatagcatcaaatttatgtccagaaag 26633327  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    | ||||||||||||||||||||||||||||||||    
T  26633326 tagaactagagtctagaaaaaactcatacgtgta 26633293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 27 - 159
Target Start/End: Complemental strand, 7366750 - 7366618
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7366750 ttgttgtgattctttcaataaaatagtttttcaaattgacaaattaagtaattattcaaattgatggtggtttaatatcatcaaatttatgtccagaaag 7366651  T
Q  127 tggaactagagtctagaaaaaactcatacgtgt 159  Q
    |||||||||||| ||||||||||||||||||||    
T  7366650 tggaactagagtatagaaaaaactcatacgtgt 7366618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 36438352 - 36438485
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||||| ||||||    
T  36438352 ttgttgtgattctttcaatgaaatggtttttcaaattgactgattaagtgattatacaaattgatagtggtttgatagcatcaaatttatgtccagaaag 36438451  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    | ||||||||| ||||||||||||||||| ||||    
T  36438452 tagaactagagcctagaaaaaactcatacctgta 36438485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 9479190 - 9479055
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||| ||||||    
T  9479190 ttgttgtgattctttcaacgaaatagttttttaaattgactgattaagtaattatacaaattgatggtggtttgatagcatcaaatttatgtccagaaag 9479091  T
Q  127 tggaactagagtctagaaaaaactcatacgtgtatt 162  Q
    | |||||||||| ||||||||| |||||||||||||    
T  9479090 tagaactagagtttagaaaaaaatcatacgtgtatt 9479055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 40737994 - 40738121
Alignment:
Q  29 gttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtg 128  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||||||| |||||     
T  40737994 gttgtgattctttcaataaaatagctttttaaattgactgattaagtaattatacaaattgatggtggtttgatagcatcaaatttatgtcaaaaaagta 40738093  T
Q  129 gaactagagtctagaaaaaactcatacg 156  Q
    |||||||||| |||||||||||||||||    
T  40738094 gaactagagtttagaaaaaactcatacg 40738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 18895398 - 18895532
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||| ||||||| |||||| || ||||||| ||||||||||||||||||| |  |||    
T  18895398 ttgttgtgattctttcaatgaaataactttttaaattgactgattaattgattatacaaattaatagtggtttgataacatcaaatttatgtctaataag 18895497  T
Q  127 tggaactagagtctagaaaaaactcatacgtgtat 161  Q
    | ||||| |||||||||||||||||||||||||||    
T  18895498 tagaactcgagtctagaaaaaactcatacgtgtat 18895532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 26282543 - 26282676
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  |||||||| |||  | || ||||||||  ||| ||    
T  26282543 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgggggtggtttgatagtaccagatttatgtgcagatag 26282642  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  26282643 gagaactaaagtctagaaaaaactcaaacgtgta 26282676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 40001697 - 40001830
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  |||||||| |||  | || ||||||||  ||| ||    
T  40001697 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattggaggtggtttgatagtaccagatttatgttcagatag 40001796  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| |||||||||||| |||| |||||||    
T  40001797 aagaactaaagtctagaaaaacctcaaacgtgta 40001830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 32956838 - 32956704
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||  ||||||||||||||| |||||||  ||||||  |||||||| ||| ||||| ||||||||| ||||||    
T  32956838 ttgttgtgattctttcaatgaaataactttataaattgactgattaaatgattataaaaattgggggtggtttgatagcatcagatttatgtccagaaag 32956739  T
Q  127 tggaactagagtct-agaaaaaactcatacgtgta 160  Q
      |||||||||||| | |||||||||| |||||||    
T  32956738 gagaactagagtctaaaaaaaaactcaaacgtgta 32956704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 33910127 - 33909993
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||   |||| ||| |||  |||| ||||||||  | ||||    
T  33910127 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagcgattatacaaattaggggtgatttgataggatcagatttatgtacaaaaag 33910028  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||||||| |||||||||| |||||||    
T  33910027 gagaactagagtctagaaaaaaactcaaacgtgta 33909993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 1366072 - 1365939
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||||| ||||| | ||||| | ||||||| |||  | |||||||||||| ||| ||    
T  1366072 ttgttgtgattctttctatgaaataacttttcaaattgactgattaagtcattataccaattggtagtggtttgatagtaccaaatttatgtccagatag 1365973  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||| ||||||| |||||||    
T  1365972 gagaactaaagtctagaagaaactcaaacgtgta 1365939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 42312071 - 42311943
Alignment:
Q  28 tgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagt 127  Q
    |||||||||||||| |||||||||| |||||||||||||| || |||||||||| ||||| || ||| ||||  |||||||| ||||||||| |||||      
T  42312071 tgttgtgattcttttaatgaaatagcttttcaaattgactaatcaagtgattatacaaatcgagggtagttt-gtaacatcagatttatgtccagaaaag 42311973  T
Q  128 ggaactagagtctagaaaaaactcatacgt 157  Q
     ||| |||||||||||||||||||| ||||    
T  42311972 agaattagagtctagaaaaaactcaaacgt 42311943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 36796373 - 36796507
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| |||||| | ||| |||| |||  |||  ||||||||  | ||||    
T  36796373 ttgttgtgattctttcaatgaaataattttccaaattgactgattaagttattatacaaattaagggtagtttgataggatccgatttatgtacaaaaag 36796472  T
Q  127 tggaactag-agtctagaaaaaactcatacgtgta 160  Q
      ||||||| ||||||||||||||||| |||||||    
T  36796473 gagaactagaagtctagaaaaaactcaaacgtgta 36796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 18015583 - 18015708
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  18015583 ttgttgtgattctttcaatgaaatagctttccaaattgattgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 18015682  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
       |||||||||||||||||||||||    
T  18015683 gaaaactagagtctagaaaaaactca 18015708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 30739184 - 30739052
Alignment:
Q  29 gttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtg 128  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||||  ||||||| | |||||| ||| ||||  ||||||||| ||||||      
T  30739184 gttgtgattcttttaatgaaataacttttcaaattgactgattaagtgattataaaaattgaagatggtttgatagcatccgatttatgtccagaaagga 30739085  T
Q  129 gaactagagtctagaa-aaaactcatacgtgta 160  Q
    ||| | || ||||||| |||||||| |||||||    
T  30739084 gaattggaatctagaaaaaaactcaaacgtgta 30739052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 41908241 - 41908119
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||| | |||||||  |||||||| | | ||||| ||||||||| | |||     
T  41908241 ttgttgtgattctttcaatgaaacagcttttctaattgactgattaagtgattgtacaaattggaggtggtttgaaagcatcagatttatgtccaaaaaa 41908142  T
Q  127 tg-gaactagagtctagaaaaaa 148  Q
    || |||| |||||| ||||||||    
T  41908141 tgagaaccagagtcaagaaaaaa 41908119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 44894030 - 44894164
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||| ||||||   ||||||||||||  |||  ||||||||  | ||||    
T  44894030 ttgttgtgattctttcaataaaatagctttccaaattgattgattaagtgattatacaaattaggggtggtttaataggatccgatttatgtacaaaaag 44894129  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||| ||||||| |||||||||| |||||||    
T  44894130 aagaactatagtctagaaaaaaactcaaacgtgta 44894164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 6380085 - 6380206
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||||  || |||||||| ||||||||||||||| ||||||   |||||||| |||  |||| ||| ||||  | ||||    
T  6380085 ttgttgtgattctttcaatgaaatagacttccaaattgattgattaagtgattatacaaattaggggtggtttgataggatcagattcatgtacaaaaag 6380184  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  6380185 aagaactagagtctagaaaaaa 6380206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 4100031 - 4099970
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  4100031 ttgttgtaattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaatt 4099970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 7636327 - 7636388
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  7636327 ttgttgcgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaatt 7636388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 46221704 - 46221765
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||| | ||||||    
T  46221704 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattctacaaatt 46221765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 147
Target Start/End: Complemental strand, 25061957 - 25061846
Alignment:
Q  36 ttctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaactag 135  Q
    ||||||||||||||||| |||||||||| |||||| |||||||| | ||||||||   | |||| ||| ||||| ||||||||| | ||||  |||||||    
T  25061957 ttctttcaatgaaatagcttttcaaattaactgataaagtgattgtacaaattgagaatagtttgatagcatcagatttatgtccaaaaagaagaactag 25061858  T
Q  136 agtctagaaaaa 147  Q
    |||||| |||||    
T  25061857 agtctaaaaaaa 25061846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 773885 - 773983
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaa 125  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||| ||||||   |||| ||| ||| ||||| |||||| || |||||    
T  773885 ttgttgtgattctttcaataaaatagcttttcaaattgactgataaagtaattatacaaattaggggtgatttgatagcatcagatttatttccagaaa 773983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 12251289 - 12251343
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 81  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||    
T  12251289 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaaatgattat 12251343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 11672649 - 11672588
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||||||||||||| ||||||    
T  11672649 ttgttgtgattctttcattgaaataactttccaaattgactgattaagtgattatacaaatt 11672588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 8358295 - 8358426
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||| |||  |||| |||||||||||||||||||||||  |||||   |||||||| |||  |||  ||||||||  | ||||    
T  8358295 ttgttgtgattctttcaatgagataactttttaaattgactgattaagtgattatataaattaggggtggtttgataggatccgatttatgtacaaaaag 8358394  T
Q  127 tggaactagagtctaga-aaaaactcatacgt 157  Q
      |||||| |||||||| ||||||||| ||||    
T  8358395 gagaactaaagtctagagaaaaactcaaacgt 8358426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 33419121 - 33419255
Alignment:
Q  30 ttgtgattctttcaatgaaatagtttttcaaattgac-tgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtg 128  Q
    ||||||||||||||||||||||  ||||||||||||| | ||||||||||||| ||||||   ||| |||| |||  |||  ||||||||  | |||       
T  33419121 ttgtgattctttcaatgaaataacttttcaaattgacttaattaagtgattatacaaattaggggtagtttgataggatccgatttatgtacaaaaacaa 33419220  T
Q  129 gaactagagtctag-aaaaaactcatacgtgtatt 162  Q
    |||||||||||||| |||||||||| |||||||||    
T  33419221 gaactagagtctagaaaaaaactcaaacgtgtatt 33419255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 42161125 - 42161182
Alignment:
Q  31 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||||||| ||| |||||| |||||| |||||||||| ||||||    
T  42161125 tgtgattctttcaatgaaatagctttccaaattaactgatcaagtgattatacaaatt 42161182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 7366604 - 7366504
Alignment:
Q  177 gtaacatataattttttaatttaagtgggggtgtgggattataannnnnnnngaggcccatagtttttagagacttgattcggtaacgcttcttgcactc 276  Q
    |||||||||||| |||||||||||||||||||| || |||||||         ||||||||| ||||||||| || | ||||||| | ||||||||||||    
T  7366604 gtaacatataatattttaatttaagtgggggtg-ggcattataatttgtttttaggcccataatttttagaggctcggttcggtagcacttcttgcactc 7366506  T
Q  277 cc 278  Q
    ||    
T  7366505 cc 7366504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 44876156 - 44876208
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgatt 79  Q
    ||||||||||||||| |||||||||| |||  ||||||||||||||| |||||    
T  44876156 ttgttgtgattcttttaatgaaatagctttctaaattgactgattaaatgatt 44876208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 41852302 - 41852434
Alignment:
Q  28 tgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagt 127  Q
    ||||| ||||||||||||||||||  | || ||||||||||| |||||||||||  || | ||  ||||||| ||| || || |||||  ||  |||||     
T  41852302 tgttgcgattctttcaatgaaataactctttaaattgactgagtaagtgattataaaattgga--gtggttttatagcaccatatttacatcctgaaagg 41852399  T
Q  128 ggaactagagtctagaaaaaactcatacgtgtatt 162  Q
     |||||| |||||||||||||| || |||||||||    
T  41852400 agaactaaagtctagaaaaaacccaaacgtgtatt 41852434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 3799761 - 3799833
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggttt 99  Q
    |||||||||||||||||||||||||| ||   |||||| || ||||| ||||||| ||| |||  ||||||||    
T  3799761 ttgttgtgattctttcaatgaaatagcttccaaaattggcttattaaatgattatacaatttggaggtggttt 3799833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 40738143 - 40738175
Alignment:
Q  177 gtaacatataattttttaatttaagtgggggtg 209  Q
    ||||||| |||||||||||||||||||||||||    
T  40738143 gtaacatgtaattttttaatttaagtgggggtg 40738175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 40841312 - 40841372
Alignment:
Q  92 ggtggtttaataacatcaaatttatgtcaagaaagtggaactagagtctagaaaaaactca 152  Q
    |||||||| ||||||||| ||||||||| | ||||   || ||||||||||||||||||||    
T  40841312 ggtggtttgataacatcatatttatgtccaaaaagaataattagagtctagaaaaaactca 40841372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 2e-55; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 17674355 - 17674487
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  17674355 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaatagcatcaaatttatatctagaaag 17674454  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    || ||||||||||||| |||||||||||||||||    
T  17674455 tgaaactagagtctag-aaaaactcatacgtgta 17674487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 22386838 - 22386964
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||| ||    
T  22386838 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattgttcaaattgatggtggttaaatagcatcaaatttatgtccagacag 22386937  T
Q  127 tggaactagagtctagaaaaaactcat 153  Q
    |||||||||||||||||||||||||||    
T  22386938 tggaactagagtctagaaaaaactcat 22386964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 24556869 - 24556736
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||  ||||||    
T  24556869 ttgttgtgattctttaaatgaaatagtttttcaaattgacttattaagtgattattcaaattgatggtggtttaatagcaccaaatttatgttgagaaag 24556770  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    ||||| ||||||||||||||||||||||||||||    
T  24556769 tggaattagagtctagaaaaaactcatacgtgta 24556736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 37873763 - 37873897
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| ||||||    
T  37873763 ttgttgtgattctttcaatgaaacagtttttcaaattaactgattaagtgactatacaaattgatggtggtttgatagcatcaaatttatgtctagaaag 37873862  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
    | |||||||||||||| ||||||||||||||||||    
T  37873863 tagaactagagtctagaaaaaaactcatacgtgta 37873897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 42740173 - 42740045
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| |||| ||| ||||||| ||||||| ||||||    
T  42740173 ttgttgcgattctttcaatgaaatagtttttcaaattgactaattaagttattatacaaattgatggttgtttgatagcatcaaacttatgtccagaaag 42740074  T
Q  127 tggaactagagtctagaaaaaactcatac 155  Q
    | |||||||||||||||||||||||||||    
T  42740073 tagaactagagtctagaaaaaactcatac 42740045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 38263924 - 38263804
Alignment:
Q  30 ttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtgg 129  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| || |||||||| ||| ||||||||||| ||||||||||||||| | |||||||    
T  38263924 ttgtgattctatcaatgaaatagttttttaaattgactgattaagtaataattcaaatcgatagtggtttaatagcatcaaatttatgtccaaaaagtgg 38263825  T
Q  130 aactagagtctagaaaaaact 150  Q
    |||||||||||||||||||||    
T  38263824 aactagagtctagaaaaaact 38263804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 44836726 - 44836840
Alignment:
Q  31 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtgga 130  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||  ||||||| ||    
T  44836726 tgtgattctttcagtgaaatagtttttcaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgttcagaaagtaga 44836825  T
Q  131 actagagtctagaaa 145  Q
    |||||| ||||||||    
T  44836826 actagaatctagaaa 44836840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 12971469 - 12971336
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||  |||||||| |||| |||| ||||||||| ||| ||    
T  12971469 ttgttgtgattctttcgatgaaatagcttttcaaattgactgattaagtgattatacaaattgggggtggtttgataatatcagatttatgtccagatag 12971370  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  12971369 gagaactaaagtctagaaaaaactcaaacgtgta 12971336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 27703530 - 27703663
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatg-tcaagaaa 125  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||  |||||||| ||| ||||||||||||| |||| |||    
T  27703530 ttgttgtgattctttcgatgaaatagctttccaaattgactgattaagtgattatacaaattgggggtggtttgatagcatcaaatttatgttcaaaaaa 27703629  T
Q  126 gtggaactagagtctagaaaaaactcatacgtgta 160  Q
    |  |||||||||||||||||||||||| |||||||    
T  27703630 g-agaactagagtctagaaaaaactcaaacgtgta 27703663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 50371197 - 50371080
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||| ||| ||| |||||| ||||| || ||||||    
T  50371197 ttgttgtgattctttcaatgaaacagtttttcaaattgactgattaagtgattatacaaattgagggtgatttgatagcatcaactttatatccagaaag 50371098  T
Q  127 tggaactagagtctagaa 144  Q
      ||||||||||||||||    
T  50371097 gagaactagagtctagaa 50371080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 13120867 - 13120940
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggttta 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13120867 ttgtggtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattaatggtggttta 13120940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 161
Target Start/End: Complemental strand, 15441354 - 15441219
Alignment:
Q  27 ttgttgtgattctttc-aatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaa 125  Q
    |||||||||||||||  |||||||||| |||  ||||||| ||||||||||||||| |||||||  |||||||| ||| ||| | ||||||||| |||||    
T  15441354 ttgttgtgattctttttaatgaaatagctttataaattgagtgattaagtgattatacaaattgtaggtggtttgatagcattatatttatgtctagaaa 15441255  T
Q  126 gtggaactagagtctagaaaaaactcatacgtgtat 161  Q
    |  |||||||||||||||||||||||| ||||||||    
T  15441254 ggagaactagagtctagaaaaaactcaaacgtgtat 15441219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 10109783 - 10109662
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||  ||||||||| |||  ||| |||||||||  | ||||    
T  10109783 ttgttgtgattctttcaatgaaattgctttccaaattgactgattaagtgattatacaaattagtggtggtttgataggatccaatttatgtacaaaaag 10109684  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  10109683 gagaactagagtctagaaaaaa 10109662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 26486407 - 26486499
Alignment:
Q  68 gattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaactagagtctagaaaaaactcatacgtgta 160  Q
    |||||||||||||| |||||||||| |||||| ||| |||||||||||| || ||||||| |||||||||| |||||||||||||||||||||    
T  26486407 gattaagtgattatacaaattgatgatggtttgatagcatcaaatttatttccagaaagtagaactagagtttagaaaaaactcatacgtgta 26486499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 5560546 - 5560413
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||  ||||||||  || || || ||||||||| |||||     
T  5560546 ttgttgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaattgggggtggtttggtagcaccagatttatgtccagaaat 5560447  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| |||||| ||||| |||| |||||||    
T  5560446 gagaactatagtctaaaaaaatctcaaacgtgta 5560413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 12884138 - 12884272
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  12884138 ttgttgtgattctttcaatgaaatagctttttaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 12884237  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
       ||||||||||||| |||||||||| |||||||    
T  12884238 gaaaactagagtctagaaaaaaactcaaacgtgta 12884272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 6150784 - 6150663
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||||   |||||||| |||  |||  ||||||||  | ||||    
T  6150784 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaaatgattatataaattaggggtggtttgataggatctgatttatgtacaaaaag 6150685  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  6150684 gagaactagagtctagaaaaaa 6150663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 33124631 - 33124707
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaata 103  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||   ||||||||||||    
T  33124631 ttgttgtgattctttcaatgaaatagcttttcaaattgacttattaagtgattatacaaattagaggtggtttaata 33124707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 50552558 - 50552424
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  50552558 ttgttgtgattctttcaatgaaataacttttcaaattgaccgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 50552459  T
Q  127 tggaactagagtcta-gaaaaaactcatacgtgta 160  Q
      |||||||||||||  |||||||||| |||||||    
T  50552458 gagaactagagtctacaaaaaaactcaaacgtgta 50552424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 18127938 - 18127999
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  18127938 ttgttgtgattcttgcaatgaaatagcttttcaaattgactgattaagtgattatacaaatt 18127999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 30899719 - 30899598
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||||   |||| ||| |||  |||  ||||||||  | ||||    
T  30899719 ttgttgtgattctttcaatgaaatagctttccaaattgactaattaagtgattatacaaattaggggtgatttgataggatccgatttatgtacaaaaag 30899620  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  30899619 gagaactagagtctagaaaaaa 30899598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 278
Target Start/End: Original strand, 13121749 - 13121925
Alignment:
Q  98 ttaataacatcaaatttatgtcaagaaagtggaactagagtctagaaaaaactcatacgtgtattgnnnnnnnnnnnnngtaacatataattttttaatt 197  Q
    |||||| |||||||||||| || |||||||||||||||||| ||||||||||||||||||||  ||             |||||||||| ||||||||||    
T  13121749 ttaatagcatcaaatttatatccagaaagtggaactagagtatagaaaaaactcatacgtgtgctg--aagaaaaaaaagtaacatatacttttttaatt 13121846  T
Q  198 taagtgggggtgtgggattataannnnnnnngaggcccatagtttttagagacttgattcggtaacgcttcttgcactccc 278  Q
    ||||||||||||| | |||||||        ||| ||||||| ||||||||||| | ||||||| ||||||||||||||||    
T  13121847 taagtgggggtgt-gtattataatttttgttgagccccatag-ttttagagactcggttcggtagcgcttcttgcactccc 13121925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 25930667 - 25930532
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||   ||| |||| |||  |||| ||||||||  | |||     
T  25930667 ttgttgtgatcctttcaatgaaatagcttttcaagttgactgattaagtgattatacaaattaggggtagtttgataggatcagatttatgtacaaaaat 25930568  T
Q  127 tggaactagagtctag--aaaaaactcatacgtgta 160  Q
      ||||||||||||||  |||||||||| |||||||    
T  25930567 gagaactagagtctagacaaaaaactcaaacgtgta 25930532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 1269614 - 1269489
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||      |||  |||||||  |||||||| ||| ||||| ||||||||| ||||||    
T  1269614 ttgttgtgattcttttaatgaaatagcttttcaaattgactaatt------tta--caaattgggggtggtttcatagcatcagatttatgtctagaaag 1269523  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      ||| |||||||||||||||||||| |||||||    
T  1269522 gagaattagagtctagaaaaaactcaaacgtgta 1269489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 17487284 - 17487405
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  ||| |||||||| | |||||||||||||  |||||   |||||||| |||  |||  |||||||| || ||||    
T  17487284 ttgttgtgattctttcaatgaaataactttccaaattgatttattaagtgattatataaattaggggtggtttgataggatccgatttatgtaaaaaaag 17487383  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  17487384 gagaactagagtctagaaaaaa 17487405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 48722371 - 48722432
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  48722371 ttgttgtgattatttcaatgaaatagctttccaaattgactgattaagtgattatacaaatt 48722432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 20905288 - 20905423
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||||  || |||||||||||| ||||||||||| ||||||   | |||||| |||  || | ||||||||  | ||||    
T  20905288 ttgttgtgattctttcaatgaaatagacttccaaattgactgaataagtgattatacaaattagggctggtttgataggattagatttatgtacaaaaag 20905387  T
Q  127 tggaactagagtctagaa--aaaactcatacgtgta 160  Q
      ||||||||||||||||  |||||||| |||||||    
T  20905388 gagaactagagtctagaaataaaactcaaacgtgta 20905423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 31369432 - 31369515
Alignment:
Q  69 attaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaactagagtctagaaaaaactca 152  Q
    ||||||||||||| ||||||||  ||||||| ||||||||| ||||||||| ||||||  ||| |||||| |||||||||||||    
T  31369432 attaagtgattatacaaattgaaagtggtttgataacatcagatttatgtccagaaaggagaattagagtttagaaaaaactca 31369515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 14084705 - 14084823
Alignment:
Q  30 ttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtgg 129  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||| ||  ||   |||| ||| |||  |||| ||||||||  | ||||  |    
T  14084705 ttgtgattctttcaatgaaatagctttctaaattgactgattaagtgattatacattttaggggtgatttgataggatcagatttatgtacaaaaaggag 14084804  T
Q  130 aactagagtctagaaaaaa 148  Q
    |||||||||||||||||||    
T  14084805 aactagagtctagaaaaaa 14084823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 29208099 - 29208220
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    ||||||||||||||||||||||||||  || || ||||||||||||| ||||||| ||||||   |||||||| |||  || | |||||||| ||| |||    
T  29208099 ttgttgtgattctttcaatgaaatagacttccagattgactgattaaatgattatacaaattaggggtggtttgatatgattagatttatgtacaaaaaa 29208198  T
Q  126 gtggaactagagtctagaaaaaa 148  Q
    |  ||||||||||||||||||||    
T  29208199 g-agaactagagtctagaaaaaa 29208220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 30004908 - 30004970
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattg 89  Q
    |||||| ||||||||||||||||||| |||||||||| | ||||||||||||||| |||||||    
T  30004908 ttgttgcgattctttcaatgaaatagcttttcaaattaattgattaagtgattatacaaattg 30004970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 51110102 - 51110156
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 81  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  51110102 ttgttgtgattctttcaatgaaatagctttctaaattgactgattaagtgattat 51110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 52055615 - 52055561
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 81  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  52055615 ttgttgtgattctttcaatgaaatagctttccaaattgattgattaagtgattat 52055561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 70 - 9
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    ||||||||||||||||||||||||   ||| |||||||||||||||||||||||| ||||||    
T  70 ttgttgtgattctttcaatgaaatcactttccaaattgactgattaagtgattatacaaatt 9  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 3907528 - 3907472
Alignment:
Q  33 tgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattg 89  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||||||    
T  3907528 tgattctttcaatgaaataatttttcaaattgattgattaaatgattatacaaattg 3907472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 28885672 - 28885733
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||| ||||||||||| |||  ||||||| ||||||||||||||| ||||||    
T  28885672 ttgttgtgattcttacaatgaaatagctttcaaaattgattgattaagtgattatacaaatt 28885733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 32810370 - 32810413
Alignment:
Q  45 tgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  32810370 tgaaatagcttttcaaattgattgattaagtgattattcaaatt 32810413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 9777477 - 9777387
Alignment:
Q  27 ttgttgtgattctttcaat-gaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttat 116  Q
    |||||||||||||||  || ||||||||| |||||||||||||||| |||||||||  ||||||  ||||||||  || ||||| ||||||    
T  9777477 ttgttgtgattctttttattgaaatagttattcaaattgactgattgagtgattatataaattgggggtggtttggtagcatcagatttat 9777387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 22386985 - 22387085
Alignment:
Q  177 gtaacatataattttttaatttaagtgggggtgtgggattataannnnnnnngaggcccatagtttttagagacttgattcggtaacgcttcttgcactc 276  Q
    |||||||||||||||||||||||||||| |||| || |||||||         ||||||||| ||||||||| || | ||||||| ||||| ||| ||||    
T  22386985 gtaacatataattttttaatttaagtggtggtg-ggtattataattgttttttaggcccataatttttagaggctcggttcggtagcgcttattgaactc 22387083  T
Q  277 cc 278  Q
    ||    
T  22387084 cc 22387085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 6333517 - 6333569
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgatt 79  Q
    ||||||||||||||| ||| |||||  ||| ||| ||||||||||||||||||    
T  6333517 ttgttgtgattcttttaataaaataactttccaatttgactgattaagtgatt 6333569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 7e-55; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 13997377 - 13997241
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||    
T  13997377 ttgttgtgattctttcaatgaaatagtttttcaaattgactcattaagtgattattcaaattgacggtggttcaatagcatcaaatttatgtccagaaag 13997278  T
Q  127 tggaactagagtctagaaaaaactcatacgtgtattg 163  Q
    || ||||||||||||| ||||||||||||||||||||    
T  13997277 tgaaactagagtctaggaaaaactcatacgtgtattg 13997241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 39081461 - 39081328
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||    
T  39081461 ttgttgtaattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgtccagaaag 39081362  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    |  |||||||||||||||||||||||||||||||    
T  39081361 taaaactagagtctagaaaaaactcatacgtgta 39081328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 29480638 - 29480768
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  29480638 ttgttgtgattctttcaatgaaataatttttcaaattgactgaataagtgtttattcaaattgatggtggtttaatagcatcaaatttatgtccagaaag 29480737  T
Q  127 tggaactagagtctagaaaaaactcatacgt 157  Q
    | |||||| |||||| |||||| ||||||||    
T  29480738 ttgaactaaagtctaaaaaaaaatcatacgt 29480768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 1418972 - 1418840
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||| | ||||    
T  1418972 ttgttgtgattctttcaatgaaatagctttacaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaa-ttatgtctaaaaag 1418874  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    | ||||||||||||||||||||||||||||||||    
T  1418873 tagaactagagtctagaaaaaactcatacgtgta 1418840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 36059906 - 36060035
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||| | ||||    
T  36059906 ttgttgtggttctttcaatgaaatagctttttaaattaactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttttgtctaaaaag 36060005  T
Q  127 tggaactagagtctagaaaaaactcatacg 156  Q
    | |||||||||||||||||||||| |||||    
T  36060006 tagaactagagtctagaaaaaacttatacg 36060035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 38599465 - 38599338
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  || ||| ||| |||||||||||| || | |||     
T  38599465 ttgttttgattctttcaatgaaatagtttttcaaattgattgattaagtgattatacaaattgataatgatttgatagcatcaaatttatatccataaaa 38599366  T
Q  127 tggaactagagtctagaaaaaactcata 154  Q
    | ||||| ||||  ||||||||||||||    
T  38599365 tagaacttgagttaagaaaaaactcata 38599338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 19367420 - 19367554
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  19367420 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgatagaatccgatttatgtacaaaaag 19367519  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||||||| |||||||||| |||||||    
T  19367520 gagaactagagtctagaaaaaaactcaaacgtgta 19367554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 15457563 - 15457430
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaaga-aa 125  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||  ||| |||| |||  | || |||||||||  || ||    
T  15457563 ttgttgtgattctttcaataaaatagcttttcaaattgactgattaagtgattatacaaattgggggtagtttgatagtaccagatttatgtccggataa 15457464  T
Q  126 gtggaactagagtctagaaaaaactcatacgtgta 160  Q
    || |||||| ||||||||||||||||| |||||||    
T  15457463 gt-gaactaaagtctagaaaaaactcaaacgtgta 15457430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 21747231 - 21747364
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||  |||||||| |||  | || ||||||||  ||| ||    
T  21747231 ttgttgtgattctttcaatgacatagtattttaaattgactgattaagtgattatacaaattgggggtggtttgatagtaccagatttatgttcagatag 21747330  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| |||||||||||| |||| |||||||    
T  21747331 aagaactaaagtctagaaaaacctcaaacgtgta 21747364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 27302529 - 27302654
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||| |||||||| |||| |||  || |||| ||||| |||| ||| ||    
T  27302529 ttgttgtgattcttttaatgatatagcttttcaaattgaccgattaagtgattatacaaattgagggtgatttggtagcatcgaatttttgtccagacag 27302628  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
      ||| ||||||||||||||||||||    
T  27302629 aagaattagagtctagaaaaaactca 27302654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 38985710 - 38985842
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||  |||||||| |||  | |||||||||||| ||| ||    
T  38985710 ttgttgtgattctttcaatgaaatagcttttcaaattgattgattaaatgattatacaaattggaggtggtttgatagtaccaaatttatgtccagatag 38985809  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      ||| || ||| ||||||||||||| |||||||    
T  38985810 gagaa-taaagtttagaaaaaactcaaacgtgta 38985842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 41096539 - 41096660
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||   |||| ||| |||  |||  ||||||||  | ||||    
T  41096539 ttgttgtgattctttcaatgaaatagttttccaaattgactgattaagtgattatacaaattaggggtgatttgataggatctgatttatgtacaaaaag 41096638  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  41096639 gagaactagagtctagaaaaaa 41096660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 42411559 - 42411692
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| |||||||||| ||| |||||||||| ||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  42411559 ttgttgtgattctttaaatgaaatagctttccaaattgactaattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 42411658  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||||||||||||||||||||| |||||||    
T  42411659 gagaactagagtctagaaaaaactcaaacgtgta 42411692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 2063868 - 2063738
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||   |||||||| |||  || | ||||||||  | ||||    
T  2063868 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggattatatttatgtacaaaaag 2063769  T
Q  127 tggaactagagtctagaaaaaactcatacgt 157  Q
       |||||||||||| |||||||||| ||||    
T  2063768 gaaaactagagtctaaaaaaaactcaaacgt 2063738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 6530722 - 6530601
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | |||     
T  6530722 ttgttgtgattctttcaatgaaataccttttcaaattgactgattaagtgattatacaaattaggggtggtttgatagtatccgatttatgtacaaaaat 6530623  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  6530622 gagaactagagtctagaaaaaa 6530601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 7993695 - 7993570
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||   |||||||| |||  |||   |||||||  | ||||    
T  7993695 ttgttgtgattctttcaatgaaatagctttccaaattggctgattaagtgattatacaaattaggggtggtttgataggatccggtttatgtacaaaaag 7993596  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
      ||||||||||||||||||||||||    
T  7993595 gagaactagagtctagaaaaaactca 7993570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 34061857 - 34061990
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| || || ||||||   |||||||| |||  | || ||||||||  | ||||    
T  34061857 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtaatcatacaaattatgggtggtttgataggaccagatttatgtacaaaaag 34061956  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| |||||| ||||||||||||||||||    
T  34061957 aagaactatagtctaaaaaaaactcatacgtgta 34061990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 31273168 - 31273291
Alignment:
Q  28 tgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagt 127  Q
    |||| ||||||||| ||||||||||| || |||||||||||||||| ||||||| |||||||  |||||||| ||||||||||||||| ||| ||||||     
T  31273168 tgttatgattcttttaatgaaatagtattccaaattgactgattaaatgattatacaaattg-gggtggtttgataacatcaaatttaagtccagaaagg 31273266  T
Q  128 ggaactagagtctagaaaaaactca 152  Q
     || || |||| || ||||||||||    
T  31273267 agagctggagtatacaaaaaactca 31273291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 13020486 - 13020365
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| ||||||   |||||||| |||  |||  |||||||| ||| |||    
T  13020486 ttgttgtgattctttaaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaa 13020387  T
Q  126 gtggaactagagtctagaaaaaa 148  Q
    |  ||||||||||||||||||||    
T  13020386 g-agaactagagtctagaaaaaa 13020365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 18676312 - 18676446
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| ||||||   ||| |||| |||  |||  ||||||||  | ||||    
T  18676312 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagttattatacaaattaggggtagtttgataggatccgatttatgtacaaaaag 18676411  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||||||| |||||||||| |||||||    
T  18676412 gagaactagagtctagaaaaaaactcaaacgtgta 18676446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 26151748 - 26151870
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  26151748 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 26151847  T
Q  127 tggaactag-agtctagaaaaaa 148  Q
      ||||||| |||||||||||||    
T  26151848 gagaactagaagtctagaaaaaa 26151870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 45042455 - 45042331
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttca---aattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaaga 123  Q
    ||||||||||||||||||||||||||  |||||   |||||||||||||||||||||| ||||||   |||||||| |||  |||||||||||||    |    
T  45042455 ttgttgtgattctttcaatgaaatagactttcaccaaattgactgattaagtgattatacaaattaggggtggtttgataggatcaaatttatgtacgaa 45042356  T
Q  124 aagtggaactagagtctagaaaaaa 148  Q
    |||  ||||||||||||||||||||    
T  45042355 aagaagaactagagtctagaaaaaa 45042331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 18172941 - 18173073
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| ||||||   |||||||| |||  | || ||||||||| | | ||    
T  18172941 ttgttgtgattctttcgatgaaatagcttttcaaattgagtgattaagtgattatacaaattaggggtggtttgatagtaccagatttatgtccatatag 18173040  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      ||| || ||||||||||||||||| |||||||    
T  18173041 gagaa-taaagtctagaaaaaactcaaacgtgta 18173073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 18916059 - 18916188
Alignment:
Q  31 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtgga 130  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||||||| |||||||  | |||||| |||  | || ||||||||| |||  |  ||    
T  18916059 tgtgattctttcagtgaaatagcttttcaaattgattgattaagtgattatacaaattggggatggtttgatagtaccagatttatgtccagattgaaga 18916158  T
Q  131 actagagtctagaaaaaactcatacgtgta 160  Q
    |||| |||||||||||| |||| |||||||    
T  18916159 actaaagtctagaaaaacctcaaacgtgta 18916188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 32186206 - 32186278
Alignment:
Q  82 tcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaactagagtctagaaaaaactcata 154  Q
    |||| ||||||||||||| ||| ||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  32186206 tcaatttgatggtggtttgatagcatcaaatttatgtctaaaaagtagaactagagtctagaaaaaactcata 32186278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 45619039 - 45618909
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  45619039 ttgttgtgattctttcaatgaaatagcttc-caaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 45618941  T
Q  127 tggaactag-agtctagaaaaaactcatacgt 157  Q
      ||||||| ||||||||||||||||| ||||    
T  45618940 gagaactagaagtctagaaaaaactcaaacgt 45618909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 4856056 - 4855995
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||    
T  4856056 ttgttgtgattctttcaatgaaatagctttccaaattcactgattaagtgattatacaaatt 4855995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 1226267 - 1226399
Alignment:
Q  27 ttgttgtgattctttcaat-gaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaa 125  Q
    |||||||||||||||  || ||||||  ||||||||||| |||||| |||||||||  ||||||| ||||||||  || ||||| |||||||||   |||    
T  1226267 ttgttgtgattctttttattgaaataacttttcaaattgtctgattgagtgattatataaattgagggtggtttggtagcatcagatttatgtc--caaa 1226364  T
Q  126 gtggaactagagtctagaaaaaactcatacgtgta 160  Q
    |  ||| |||||||||||||||||||| |||||||    
T  1226365 ggagaattagagtctagaaaaaactcaaacgtgta 1226399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 17117646 - 17117691
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgatta 72  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  17117646 ttgttgtgattctttcaatgaaatagcttttcaaattgactgatta 17117691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 25222386 - 25222325
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||||||||||  |||  ||||||||| ||||||||||||| ||||||    
T  25222386 ttgttgtgattctttcaatgaaataactttctaaattgactaattaagtgattatacaaatt 25222325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 18482507 - 18482600
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttt-tcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtc 119  Q
    ||||||| |||||||||||||||||  | | | |||||||||||||||| |||||| |||||||  ||| ||||  || |||||||||||||||    
T  18482507 ttgttgttattctttcaatgaaataactgtgttaaattgactgattaagcgattatacaaattgggggtagtttgttagcatcaaatttatgtc 18482600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 42759757 - 42759802
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgatta 72  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||    
T  42759757 ttgttgtgattctttcaatgaaataactttccaaattgactgatta 42759802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 36060058 - 36060090
Alignment:
Q  177 gtaacatataattttttaatttaagtgggggtg 209  Q
    ||||||| |||||||||||||||||||||||||    
T  36060058 gtaacatgtaattttttaatttaagtgggggtg 36060090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 17325908 - 17325777
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagttttt-caaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaa 125  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||    
T  17325908 ttgttgtgattctttcaatgaaatagttttttcaaattgactgattaagtgattattcaaatcgatggtagtttaatagcatcaaatttatgtccagaaa 17325809  T
Q  126 gtggaactagagtctagaaaaaactcatacgt 157  Q
    |||||||||||||||| |||||||||||||||    
T  17325808 gtggaactagagtctaaaaaaaactcatacgt 17325777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 27 - 159
Target Start/End: Complemental strand, 138207 - 138075
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||   ||||    
T  138207 ttgttgtgattatttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgtccgaaaag 138108  T
Q  127 tggaactagagtctagaaaaaactcatacgtgt 159  Q
    | |||||||||||||||||||||||||||||||    
T  138107 tagaactagagtctagaaaaaactcatacgtgt 138075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 16515587 - 16515454
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||    
T  16515587 ttgttgtgattctttcaataaaataatttttcaaattgattgattaagtgattattaaaattgatggtgttttaatagcatcaaatttatgtctagaaag 16515488  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    | |||||| ||| || ||||| ||||||||||||    
T  16515487 tagaactaaagtttaaaaaaagctcatacgtgta 16515454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 20976048 - 20975927
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||||| |||  | |||||||||||||||| |     
T  20976048 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaaatgattatacaaattggtggtggtttgatagtaccaaatttatgtcaagataa 20975949  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      |||||| |||||||||||||    
T  20975948 gagaactaaagtctagaaaaaa 20975927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 42291882 - 42292015
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||| ||| |||  | |||||||||||| ||| ||    
T  42291882 ttgttgtgattctttcaatgaaatagattttcaaattgactgattaagtgattatacaaattggtggtgatttgatagtaccaaatttatgtccagatag 42291981  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||| ||||||||| ||| |||||||    
T  42291982 gagaactaaagtttagaaaaaagtcaaacgtgta 42292015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 43511681 - 43511548
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||  |||||||| |||  | || ||||||||| ||| ||    
T  43511681 ttgttgtgattctttccatgaaatagcttttcaaattgactgattaagtgattatacaaattgggggtggtttgatagtaccagatttatgtccagatag 43511582  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  43511581 gagaactaaagtctagaaaaaactcaaacgtgta 43511548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 10033607 - 10033489
Alignment:
Q  30 ttgtgattctttcaatgaaatagtttttcaaattgactg-attaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtg 128  Q
    |||||||||||||||| |||||| ||||||||||||||  | | ||||||||| ||||||||||| ||||| ||| ||||||||||||||  |||||||     
T  10033607 ttgtgattctttcaataaaatagcttttcaaattgactttaatcagtgattatacaaattgatgggggtttgatagcatcaaatttatgtacagaaagta 10033508  T
Q  129 gaactagagtctagaaaaa 147  Q
    |||||||||||||||||||    
T  10033507 gaactagagtctagaaaaa 10033489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 3349730 - 3349862
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||||| | ||||||| ||   | |||||||||||| ||| ||    
T  3349730 ttgttgtgattctttctatgaaatagcttttcaaattgactgattaagtcattattccaattggtagtggtttgat-gtaccaaatttatgtccagatag 3349828  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  3349829 gagaactaaagtctagaaaaaactcaaacgtgta 3349862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 4734583 - 4734708
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||| |||| ||| |||||| ||||||| ||||||||| |||  | || ||||||||| ||| ||    
T  4734583 ttgttgtgattctttcaatgaaatagattttcaaattgagtgatcaagggattatacaaattggtggtggtttgatagtaccagatttatgtccagatag 4734682  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
      |||||| |||||||||||||||||    
T  4734683 gagaactaaagtctagaaaaaactca 4734708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 10591274 - 10591407
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||| |||||||  |||||||| |||  | || ||||||||  ||| ||    
T  10591274 ttgttgtgattctttcaatgaaataacttttcaaattaactgattaagtgattatacaaattgggggtggtttgatagtaccatatttatgttcagatag 10591373  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  10591374 gagaactaaagtctagaaaaaactcaaacgtgta 10591407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 40956376 - 40956245
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||  |   |||| ||  ||||| ||||||||| | ||||    
T  40956376 ttgttgtgattcttttaatgaaatagtttttcaaattaaatgattaagtgattatacaaattggagaatgtttgattgcatcagatttatgtccacaaag 40956277  T
Q  127 tggaactagagtctagaaaaaactcatacgtg 158  Q
      |||||||||||||||||||||||| |||||    
T  40956276 gagaactagagtctagaaaaaactcaaacgtg 40956245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 5829446 - 5829315
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| |||||||||| |||  ||||||||||||||||||||||| |||||||| | |||||| |||  | || ||||||||||||| ||    
T  5829446 ttgttgtgattcttttaatgaaatagcttt--aaattgactgattaagtgattatacaaattgaggttggtttgatagtaccagatttatgtcaagatag 5829349  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| |||||| |||||||||| |||||||    
T  5829348 gagaactaaagtctataaaaaactcaaacgtgta 5829315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 27351404 - 27351282
Alignment:
Q  35 attctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaacta 134  Q
    |||||||||||||||||  ||| ||||||||||||||||||| |||| |||||||  |||||||| ||| || |||||||||||  ||||||  ||||||    
T  27351404 attctttcaatgaaataactttccaaattgactgattaagtggttatacaaattggaggtggtttgatagcaccaaatttatgttcagaaaggagaacta 27351305  T
Q  135 gagtctagaaaaaactcatacgt 157  Q
    ||||||||||||| |||| ||||    
T  27351304 gagtctagaaaaatctcaaacgt 27351282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 18873520 - 18873416
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattca----aattgatggtggtttaataacatcaaatttatgtcaag 122  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||    ||||||||||||||| ||| ||||||||||||||  ||    
T  18873520 ttgttgtgattctttcaatgaaatagcttttcaaattggctgattaagtggttatacaaattaattgatggtggtttgatagcatcaaatttatgttcag 18873421  T
Q  123 aaagt 127  Q
    |||||    
T  18873420 aaagt 18873416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 13656273 - 13656137
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt---gatggtggtttaataacatcaaatttatgtcaaga 123  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||   ||||||  |||  ||  |||  ||||||||  | |    
T  13656273 ttgttgtgattctttcaatgaaataacttttcaaattgactgattaagtgattatacaaattagggatggtttttttttaggatccgatttatgtacaaa 13656174  T
Q  124 aagtggaactagagtctagaaaaaactcatacgtgta 160  Q
    |||  |||||||||||||||||||||||| |||||||    
T  13656173 aaggagaactagagtctagaaaaaactcaaacgtgta 13656137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 17513937 - 17514070
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||  ||||||||  ||  | || |||||| || ||| ||    
T  17513937 ttgttgtgattctttcagtgaaataacttttcaaattgactgattaagtgattatacaaattgggggtggtttgttagtaccagatttatatccagatag 17514036  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| |||||||||||| |||| |||||||    
T  17514037 gagaactaaagtctagaaaaacctcaaacgtgta 17514070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 29156253 - 29156120
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||   |||||||| |||  | || ||||||||  ||| ||    
T  29156253 ttgttgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaattaggggtggtttgatagtaccagatttatgttcagatag 29156154  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
       ||||| ||||||||||||||||| |||||||    
T  29156153 gataactatagtctagaaaaaactcaaacgtgta 29156120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 40779254 - 40779130
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||| | ||||| |||||||||||||||||||| |||||  |||||| |||||||  | | |||| ||||||||||||||||||  ||||||    
T  40779254 ttgttgtgattcct-caatggaatagtttttcaaattgacttattaaacgattatacaaattggggatagtttgataacatcaaatttatgttcagaaag 40779156  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
      |||||||| |||||||||||||||    
T  40779155 gagaactagactctagaaaaaactca 40779130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 19099315 - 19099376
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  19099315 ttgttgtgattctttcaatgaaatagctttttaaattgactgattaagtgattatacaaatt 19099376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 26377775 - 26377896
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| || ||| ||||||||| ||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  26377775 ttgttgtgattctttcaatgaaatagcttctcacattgactgaataagtgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaag 26377874  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  26377875 gagaactagagtctagaaaaaa 26377896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 13474693 - 13474559
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  |||||||| ||| |||    
T  13474693 ttgttgtgattctttcaatgaaacaacttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaa 13474594  T
Q  126 gtggaactagagtctag-aaaaaactcatacgtgta 160  Q
    |  |||||||||| ||| |||||||||| |||||||    
T  13474593 g-agaactagagtttagaaaaaaactcaaacgtgta 13474559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 12661372 - 12661311
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||    
T  12661372 ttgttgtgattctttcaatgaaatagctttccaaattgactggttaagtgattatacaaatt 12661311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 13423927 - 13423866
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||||||||||| |||  ||||||| ||||||||||||||| ||||||    
T  13423927 ttgttgtgattctttcaatgaaatagctttctaaattgattgattaagtgattatacaaatt 13423866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 36718570 - 36718689
Alignment:
Q  29 gttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtg 128  Q
    ||||||||||||||||| |||||  ||| |||||||||||||||| ||||||| ||||||   |||||||| |||  |||  ||| ||||  | ||||      
T  36718570 gttgtgattctttcaataaaataactttacaaattgactgattaaatgattatacaaattaggggtggtttgataggatccgattcatgtacaaaaagga 36718669  T
Q  129 gaactagagtctagaaaaaa 148  Q
    ||||||||||||||||||||    
T  36718670 gaactagagtctagaaaaaa 36718689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 7390401 - 7390460
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaa 86  Q
    |||| ||||||||||| ||||||||  |||| ||||||||||||||||||||||| ||||    
T  7390401 ttgtcgtgattctttcgatgaaataactttttaaattgactgattaagtgattatacaaa 7390460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 931411 - 931354
Alignment:
Q  59 aaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttat 116  Q
    ||||||||||||||||||||||| |||||||   ||| ||||||| ||||||||||||    
T  931411 aaattgactgattaagtgattatacaaattgggtgtgatttaatagcatcaaatttat 931354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 33281730 - 33281677
Alignment:
Q  34 gattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 87  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||||||| |||||    
T  33281730 gattctttcaatgaaataactttttaaattgactaattaagtgattatacaaat 33281677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 37029051 - 37029095
Alignment:
Q  45 tgaaatagtttttcaaattgactgattaagtgattattcaaattg 89  Q
    |||||||| |||| ||||||| ||||||||||||||| |||||||    
T  37029051 tgaaatagctttttaaattgattgattaagtgattatacaaattg 37029095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 35653981 - 35654114
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||| ||||||||| ||||||    
T  35653981 ttgttgtgattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaattgatggtggtttgatagcatcatatttatgtccagaaag 35654080  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    | ||||||||||||||||||||||||||||||||    
T  35654081 tagaactagagtctagaaaaaactcatacgtgta 35654114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 22423747 - 22423614
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||| ||||||||||||| ||||||||||||||||||| |||||||||||| || ||||||||||||||||| ||| ||||||||||||||| ||||||    
T  22423747 ttgttttgattctttcaataaaatagtttttcaaattgattgattaagtgatcatacaaattgatggtggtttgatagcatcaaatttatgtccagaaag 22423648  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    | ||||||||||||||||||||||||||||||||    
T  22423647 tagaactagagtctagaaaaaactcatacgtgta 22423614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 27 - 159
Target Start/End: Original strand, 43154789 - 43154921
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| |||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| | ||||    
T  43154789 ttgttgtgattcttttaatgaaataactttttaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgtccaaaaag 43154888  T
Q  127 tggaactagagtctagaaaaaactcatacgtgt 159  Q
    | |||||||| ||||||||||||||||||||||    
T  43154889 tagaactagaatctagaaaaaactcatacgtgt 43154921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 24449189 - 24449054
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatg--gtggtttaataacatcaaatttatgtcaagaa 124  Q
    |||||||| ||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||   ||||||| ||| |||||||||||| || ||||    
T  24449189 ttgttgtggttctttctaagaaatagtttttcaaattgaccgattaagtgattatacaaattgatatagtggtttgatagcatcaaatttatatccagaa 24449090  T
Q  125 agtggaactagagtctagaaaaaactcatacgtgta 160  Q
    ||| ||||||||||||||||||||||||||||||||    
T  24449089 agtagaactagagtctagaaaaaactcatacgtgta 24449054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 21791548 - 21791673
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| || ||||| |||||||| ||  ||||||||||||||  ||||||    
T  21791548 ttgttgtgattctttcaatgaaataacttttcaaattgactgattaagtgattatacacattgaaggtggtttgatggcatcaaatttatgttcagaaag 21791647  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
      ||||||||||||||||||||||||    
T  21791648 gagaactagagtctagaaaaaactca 21791673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 5545392 - 5545261
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||| ||||||| ||||||||| ||  ||||||||||||||| ||| ||    
T  5545392 ttgttgtgattcttttaatgaaatagctttccaaattgaccgattaagtgattatacaaattggtggtggtttgatggcatcaaatttatgtccagacag 5545293  T
Q  127 tggaactagagtctagaaaaaactcatacgtg 158  Q
      ||| |||||||||||||||||||| |||||    
T  5545292 aagaattagagtctagaaaaaactcaaacgtg 5545261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 32130791 - 32130916
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  32130791 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 32130890  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
      ||||||| ||||||||||||||||    
T  32130891 aagaactagtgtctagaaaaaactca 32130916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 45172646 - 45172778
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| | |||||||| |||  | || ||||||||| |||  |    
T  45172646 ttgttgtgattctttccatgaaatagcttttcaaattgactgattaagtgattatacaaatt-agggtggtttgatagtaccagatttatgtccagattg 45172744  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  45172745 gagaactaaagtctagaaaaaactcaaacgtgta 45172778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 19661442 - 19661309
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | |||     
T  19661442 ttgttgtgtttctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaat 19661343  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||||||||||||||||||||| |||||||    
T  19661342 gagaactagagtctagaaaaaactcaaacgtgta 19661309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 23426167 - 23426288
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  23426167 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattagaggtggtttgataggatccgatttatgtacaaaaag 23426266  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  23426267 gagaactagagtctagaaaaaa 23426288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 34982287 - 34982154
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||  | ||||||  ||  | || ||||||||| ||| ||    
T  34982287 ttgttgtgattctttcaacgaaatagtttttccaattgactgattaagtgattatacaaattggggatggtttgttagtaccagatttatgtccagatag 34982188  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
       ||||| ||||||||||||||||| |||||||    
T  34982187 aaaaactaaagtctagaaaaaactcaaacgtgta 34982154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 55134271 - 55134138
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| | ||||| | ||||||| |||  | |||||||||||| ||| |     
T  55134271 ttgttgtgattctttctatgaaatagcttttcaaattgactgattaagtcattataccaattggtagtggtttgatagtaccaaatttatgtccagataa 55134172  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| |||||| |||||||||| |||||||    
T  55134171 gagaactaaagtctacaaaaaactcaaacgtgta 55134138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 10575524 - 10575647
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||| |||||||||||||  |||  ||||||||||||||||||||||| ||| |||| |||||||| ||| ||| |||||||||| || |||     
T  10575524 ttgttgtgattatttcaatgaaataactttctaaattgactgattaagtgattatacaagttgagggtggtttgatagcataaaatttatgttaaaaaa- 10575622  T
Q  127 tggaactagagtctagaaaaaactcat 153  Q
      |||||||||| ||||||||||||||    
T  10575623 --gaactagagtttagaaaaaactcat 10575647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 27632457 - 27632327
Alignment:
Q  31 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtgga 130  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||   |||||||| |||  |||||||||||||  | ||||  ||    
T  27632457 tgtgattctttcaatgaagtagcttttcaaattgactaattaagtgattatacaaattaggggtggtttgataggatcaaatttatgtacaaaaaggaga 27632358  T
Q  131 actagagtctagaa-aaaactcatacgtgta 160  Q
    |||||| ||||||| |||||||| |||||||    
T  27632357 actagaatctagaaaaaaactcaaacgtgta 27632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 28463589 - 28463710
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||| ||||||   |||||||| |||| |||  ||||||||  | ||||    
T  28463589 ttgttgtgattttttcaatgaaatagcttttcaacttgattgattaagtgattatacaaattaggggtggtttgataagatccgatttatgtacaaaaag 28463688  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  28463689 gagaactagagtctagaaaaaa 28463710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 41038313 - 41038252
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  41038313 ttgttgtgattctttcaatgaaatagttttccaaattgactgattaagtgattatacaaatt 41038252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 53011775 - 53011642
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  53011775 ttgttgtgattcttttaatgaaatagctttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaag 53011676  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      ||| |||||| ||||||||||||| |||||||    
T  53011675 gagaattagagtttagaaaaaactcaaacgtgta 53011642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 29579943 - 29579823
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||| | ||||| ||||||   |||||||| |||  |||| ||||||||  | |||     
T  29579943 ttgttgtgattctttcattgaaatagcttttcaatttgactgattaattaattatacaaattatgggtggtttgataggatcagatttatgtacaaaaaa 29579844  T
Q  127 tggaactagagtctagaaaaa 147  Q
    | |||||||||||||||||||    
T  29579843 tagaactagagtctagaaaaa 29579823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 11681743 - 11681878
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||  |||||   |||||||| |||  |||  ||||||||  || |||    
T  11681743 ttgttgtgattctttcaatgaaataactttccaaattgactgattaagtgattataaaaattaggggtggtttgataggatccgatttatgtaaaaaaaa 11681842  T
Q  126 gtggaactagagtctag-aaaaaactcatacgtgta 160  Q
    |  |||||||||||||| |||||||||| |||||||    
T  11681843 ggagaactagagtctagaaaaaaactcaaacgtgta 11681878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 11690022 - 11690157
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||  |||||   |||||||| |||  |||  ||||||||  || |||    
T  11690022 ttgttgtgattctttcaatgaaataactttccaaattgactgattaagtgattataaaaattaggggtggtttgataggatccgatttatgtaaaaaaaa 11690121  T
Q  126 gtggaactagagtctag-aaaaaactcatacgtgta 160  Q
    |  |||||||||||||| |||||||||| |||||||    
T  11690122 ggagaactagagtctagaaaaaaactcaaacgtgta 11690157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 44478102 - 44478041
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||    
T  44478102 ttgttgtgattctttcaatgaaatagctttccaaattgactgatttagtgattatacaaatt 44478041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 16072648 - 16072566
Alignment:
Q  36 ttctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt 118  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||   | |||||| |||  |||||||||||||    
T  16072648 ttctttcattgaaatagtttttcaaattgactgattaaatgattatacaaattagggatggtttgataggatcaaatttatgt 16072566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 23256657 - 23256532
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||| |||||||| |||  |||||||||||||||||| |||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  23256657 ttgttgtgattctttcattgaaatagctttctaaattgactgattaagtggttatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 23256558  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
      ||||| ||||||| ||||||||||    
T  23256557 gagaactggagtctaaaaaaaactca 23256532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 29221622 - 29221743
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||| |||||||||||||  || ||||||||| | |||||||||||| |||||| |  ||||||| |||  |||| ||||||||  | |||     
T  29221622 ttgttgtgattccttcaatgaaatagacttccaaattgaccgtttaagtgattatacaaattaagagtggtttgataggatcagatttatgtacaaaaac 29221721  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||| ||||||||||||||||    
T  29221722 gagaattagagtctagaaaaaa 29221743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 22423599 - 22423567
Alignment:
Q  177 gtaacatataattttttaatttaagtgggggtg 209  Q
    |||||||||||||||||||| ||||||||||||    
T  22423599 gtaacatataattttttaatataagtgggggtg 22423567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 3e-48; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 36538187 - 36538320
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||| | ||||    
T  36538187 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaagtttatgtccataaag 36538286  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    |  ||||||||| |||||||||||||||||||||    
T  36538287 tataactagagtttagaaaaaactcatacgtgta 36538320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 51147000 - 51146867
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| | ||||    
T  51147000 ttgttgtgattctttcaataaaatagttttttaaattgactgattaagtgat-attcaaattgatggtggtttaatagcatcaaatttatgtccaaaaag 51146902  T
Q  127 tggaactagagtctagaa-aaaactcatacgtgta 160  Q
    |||||||||| ||||||| ||||||||||||||||    
T  51146901 tggaactagaatctagaaaaaaactcatacgtgta 51146867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 7767126 - 7766991
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||| ||||||    
T  7767126 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgatggttgtttgatagcatcaaatttatgtccagaaag 7767027  T
Q  127 tggaactagagtctagaa--aaaactcatacgtgta 160  Q
    | ||||| ||||||||||  ||||||||||||||||    
T  7767026 tagaactggagtctagaaaaaaaactcatacgtgta 7766991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 27 - 159
Target Start/End: Original strand, 42009263 - 42009395
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||    
T  42009263 ttgttgtgattctttcaatgaaataactttttaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatttatgtccagaaag 42009362  T
Q  127 tggaactagagtctagaaaaaactcatacgtgt 159  Q
    | |||||| |||||| |||||||||||||||||    
T  42009363 tagaactaaagtctaaaaaaaactcatacgtgt 42009395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 27 - 159
Target Start/End: Complemental strand, 27303250 - 27303118
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||| ||  ||||||||||||||| | ||||    
T  27303250 ttgttgtgattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaattgatggtggtttcatggcatcaaatttatgtccataaag 27303151  T
Q  127 tggaactagagtctagaaaaaactcatacgtgt 159  Q
    | ||| ||||||||||||||||| |||||||||    
T  27303150 tagaagtagagtctagaaaaaacacatacgtgt 27303118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 159
Target Start/End: Original strand, 50677315 - 50677447
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||| |||| ||||||    
T  50677315 ttgttgtgattgtttcaatgaaatagtttttcaaattgactgattaagtgattatacaaattgatggtggtttgataacaacaaatttttgtccagaaag 50677414  T
Q  127 tggaactagagtctagaaaaaactcatacgtgt 159  Q
    |  ||||| ||||||| |||||| |||| ||||    
T  50677415 tataactaaagtctaggaaaaacccatatgtgt 50677447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 46904805 - 46904662
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaattt----------at 116  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |          ||    
T  46904805 ttgttgtgattctttcaatgaaatagttttttaaattgactgattaagtgattatacaaattgatggtggtttgatagcatcaaatctatgtccagaaat 46904706  T
Q  117 gtcaagaaagtggaactagagtctagaaaaaactcatacgtgta 160  Q
    ||| ||||||| ||||||||||||||||||||||||||| ||||    
T  46904705 gtctagaaagtagaactagagtctagaaaaaactcatacatgta 46904662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 48627030 - 48627163
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||  |||||| | |||  |||| ||||||||| ||| |     
T  48627030 ttgttgtgattctttcaatgaaatagattttcaaattgactgatcaagtgattatacaaattggcggtggtctgatagtatcagatttatgtccagatat 48627129  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  48627130 gagaactaaagtctagaaaaaactcaaacgtgta 48627163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 51939557 - 51939688
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  |||||||| ||| |||    
T  51939557 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaaa 51939656  T
Q  126 gtggaactagagtctagaaaaaactcatacgtg 158  Q
    |  |||||||||||||||||||||||| |||||    
T  51939657 g-agaactagagtctagaaaaaactcaaacgtg 51939688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 41707056 - 41707190
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  41707056 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatgcaaattaggggtggtttgataggatccgatttatgtacaaaaag 41707155  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||||||| |||||||||| |||||||    
T  41707156 gagaactagagtctagaaaaaaactcaaacgtgta 41707190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 21784785 - 21784918
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  21784785 ttgttgtgattctttcaatgaaatagctttccaaattaactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 21784884  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||||||||||||||||||||| |||||||    
T  21784885 gagaactagagtctagaaaaaactcaaacgtgta 21784918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 23164573 - 23164706
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||||||  || |||||||| ||||||||||||||| ||||||   |||||||| |||  |||| ||||||||  | ||||    
T  23164573 ttgttgtgattctttcaatgaaatagacttccaaattgattgattaagtgattatacaaattaggggtggtttgataggatcagatttatgtacaaaaag 23164672  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||||||||||||||||||||| |||||||    
T  23164673 gagaactagagtctagaaaaaactcaaacgtgta 23164706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 25599087 - 25599208
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||   |||||||| |||  |||| ||||||||  | ||||    
T  25599087 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattatataaattagaggtggtttgatagaatcagatttatgtacaaaaag 25599186  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||| ||||||    
T  25599187 gagaactagagtctaaaaaaaa 25599208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 54430607 - 54430482
Alignment:
Q  35 attctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaacta 134  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||| ||||||   |||||||| ||||||||| ||||||||  | ||||  ||||||    
T  54430607 attcttttaatgaaataacttttcaaattgactgattaagtgattatacaaattaggggtggtttgataacatcagatttatgtacaaaaaggagaacta 54430508  T
Q  135 gagtctagaaaaaactcatacgtgta 160  Q
    ||| |||||||||||||| |||||||    
T  54430507 gagcctagaaaaaactcaaacgtgta 54430482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 46791698 - 46791832
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  46791698 ttgttgtgattcttgcaatgaaatagttttccaaattgactgattaagtgattatacaaattagaggtggtttgataggatccgatttatgtacaaaaag 46791797  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||||||| |||||||||| |||||||    
T  46791798 gagaactagagtctagaaaaaaactcaaacgtgta 46791832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 21596398 - 21596265
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||  |||||||||| ||| ||||| |||||||||||||||||| |||||||   ||||||| ||| ||||  ||||||||| ||||||    
T  21596398 ttgttgtgattcttgtaatgaaatagctttccaaatcgactgattaagtgattatacaaattgggagtggtttgatagcatctgatttatgtccagaaag 21596299  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      ||| ||||||||||||||||| || |||||||    
T  21596298 gagaattagagtctagaaaaaacgcaaacgtgta 21596265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 28132736 - 28132857
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| | |||| ||| |||  |||  ||||||||  | ||||    
T  28132736 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattaagggtgatttgataggatctgatttatgtacaaaaag 28132835  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  28132836 gagaactagagtctagaaaaaa 28132857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 159
Target Start/End: Original strand, 52655124 - 52655257
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||  ||||||||| |||  |||  |||||| |  | ||||    
T  52655124 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgattatacaaattagtggtggtttgataggatccgatttatatacaaaaag 52655223  T
Q  127 tggaactagagtctaga-aaaaactcatacgtgt 159  Q
      ||||||||||||||| ||||||||| ||||||    
T  52655224 gagaactagagtctagagaaaaactcaaacgtgt 52655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 13401522 - 13401401
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |  ||||||| |||  ||| ||| |||||  | ||||    
T  13401522 ttgttgtgattcttccaatgaaatagcttttcaaattgactgattaagtgattatacaaattaagagtggtttgataggatcgaatgtatgtacaaaaag 13401423  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      |||||||||| |||||||||    
T  13401422 gagaactagagtttagaaaaaa 13401401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 18408254 - 18408121
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | |||     
T  18408254 ttgttgtgattctttcaatggattagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaat 18408155  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  18408154 gagaactaaagtctagaaaaaactcaaacgtgta 18408121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 8364235 - 8364101
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  8364235 ttgttgtgattctttcaatgaaataactttccaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 8364136  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||| ||||||||| |||||||||| |||||||    
T  8364135 gagaacaagagtctagaaaaaaactcaaacgtgta 8364101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 29387755 - 29387889
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  29387755 ttgttgtgattctttcaatgaaataacttttcaaattgattgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 29387854  T
Q  127 tggaactagagtct-agaaaaaactcatacgtgta 160  Q
      |||||||||||| | |||||||||| |||||||    
T  29387855 gagaactagagtctaaaaaaaaactcaaacgtgta 29387889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 40152130 - 40152264
Alignment:
Q  27 ttgttgtgattc-tttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaa 125  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| |||||||  | || |||  || ||||| || |||||| | |||    
T  40152130 ttgttgtgattcgttttaatgaaatagtttttcaaattgaccgattaagtgattatacaaattggggatgatttggtagcatcagatctatgtctaaaaa 40152229  T
Q  126 gtggaactagagtctagaaaaaactcatacgtgta 160  Q
    |  ||| ||||||||| |||||||||| |||||||    
T  40152230 gaagaattagagtctaaaaaaaactcaaacgtgta 40152264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 19965884 - 19965973
Alignment:
Q  30 ttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtc 119  Q
    |||||||||||| |||||||||| ||||||| || ||| ||||||||||||| |||||||   ||||||| ||| ||||| |||||||||    
T  19965884 ttgtgattcttttaatgaaatagcttttcaatttaactaattaagtgattatacaaattggcagtggtttgatagcatcagatttatgtc 19965973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 24252683 - 24252563
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||| || |||||||  ||| |||||||||||||||||||||||| |||||| | |||||||| |||  |||  | ||||||  | ||||    
T  24252683 ttgttgtgattcttgcactgaaataactttccaaattgactgattaagtgattatacaaattaagggtggtttgataggatctga-ttatgtacaaaaag 24252585  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  24252584 aagaactagagtctagaaaaaa 24252563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 1649843 - 1649955
Alignment:
Q  38 ctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaactagag 137  Q
    |||||| |||||||| |||||||||||| ||||||||||||||| |||||||  |||| ||| ||| || || ||||||||| |||||   ||||||||     
T  1649843 ctttcagtgaaatagattttcaaattgaatgattaagtgattatacaaattgggggtgatttgatagcaccagatttatgtctagaaaagagaactagat 1649942  T
Q  138 tctagaaaaaact 150  Q
    | |||| ||||||    
T  1649943 tttagacaaaact 1649955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 161
Target Start/End: Original strand, 43905862 - 43905978
Alignment:
Q  45 tgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaactagagtctagaa 144  Q
    |||||||  |||||||||||||||||| ||||||||| |||||||| ||| |||| |||  | || ||||||||| ||| ||  |||||| |||||| ||    
T  43905862 tgaaataacttttcaaattgactgattgagtgattatacaaattgagggtagtttgatagtaccagatttatgtccagataggagaactaaagtctaaaa 43905961  T
Q  145 aaaactcatacgtgtat 161  Q
    ||| |||| ||||||||    
T  43905962 aaacctcaaacgtgtat 43905978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 27729770 - 27729904
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||| || |||| | ||| |||||||| |||||| |||||||| ||||||   |||||||| |||| |||  ||||||||  | ||||    
T  27729770 ttgttgtgattctttcgatcaaattgctttccaaattgattgattatgtgattatacaaattaggggtggtttgataagatccgatttatgtacaaaaag 27729869  T
Q  127 tggaactagagtcta-gaaaaaactcatacgtgta 160  Q
      |||||||||||||  |||||||||| |||||||    
T  27729870 gagaactagagtctacaaaaaaactcaaacgtgta 27729904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 23067730 - 23067847
Alignment:
Q  31 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtgga 130  Q
    ||||||||||| |||||||||  ||||||||||||||| | |||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||  ||    
T  23067730 tgtgattctttaaatgaaataacttttcaaattgactggtgaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaggaga 23067829  T
Q  131 actagagtctagaaaaaa 148  Q
    |||| |||||||||||||    
T  23067830 actaaagtctagaaaaaa 23067847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 1255057 - 1255143
Alignment:
Q  33 tgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtc 119  Q
    |||||||||||||||||||  |||  |||||||| |||||||| ||||| |||||| | ||| |||| ||| ||||| |||||||||    
T  1255057 tgattctttcaatgaaataactttctaaattgaccgattaagtcattatacaaattaaaggtcgtttgatagcatcagatttatgtc 1255143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 20762112 - 20762052
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaat 87  Q
    ||||| ||||||||||||||||||||  || |||||| |||||| |||||||||| |||||    
T  20762112 ttgttatgattctttcaatgaaatagacttccaaattaactgatcaagtgattatacaaat 20762052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 46904644 - 46904612
Alignment:
Q  177 gtaacatataattttttaatttaagtgggggtg 209  Q
    ||||||| |||||||||||||||||||||||||    
T  46904644 gtaacatgtaattttttaatttaagtgggggtg 46904612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 3628748 - 3628881
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| |||||||| |||||| |||||||||| ||| ||||||||||||| | |||| |    
T  3628748 ttgttgtgattctttcaatgaaataacttttcaaattgactgattatgtgattatacaaattaatggtggtttgatagcatcaaatttatgaccagaatg 3628847  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
    | ||||||||||||||||||||||||||||||||    
T  3628848 tagaactagagtctagaaaaaactcatacgtgta 3628881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 35874989 - 35874854
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatg--gtggtttaataacatcaaatttatgtcaagaa 124  Q
    |||||||| ||||||| | ||||||||||||||||||||| |||||||||||||| |||||||||   ||||||| ||| |||||||||||| || ||||    
T  35874989 ttgttgtggttctttctaagaaatagtttttcaaattgaccgattaagtgattatacaaattgatatagtggtttgatagcatcaaatttatatccagaa 35874890  T
Q  125 agtggaactagagtctagaaaaaactcatacgtgta 160  Q
    ||| ||||||||||||||||||||||||||||||||    
T  35874889 agtagaactagagtctagaaaaaactcatacgtgta 35874854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 32098179 - 32098312
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| |  ||||||| ||| ||||||||||||||| | ||||    
T  32098179 ttgttgtgattctttcaatgaaatagttttccaaattgactgattaagtgatcatacaaattaagagtggtttgatagcatcaaatttatgtccaaaaag 32098278  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
       ||||||||||||||||||||||| |||||||    
T  32098279 gataactagagtctagaaaaaactcaaacgtgta 32098312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 34523952 - 34524085
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  |||||||| |||  | || ||||||||| ||| ||    
T  34523952 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattgggggtggtttgatagtaccagatttatgtccagatag 34524051  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  34524052 gagaactaaagtctagaaaaaactcaaacgtgta 34524085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 39697939 - 39698072
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| |||| || ||||||| ||||||||| |||  | |||||||||| ||||| ||    
T  39697939 ttgttgtgattctttcaatgaaatagcttttcaaattgactaattaaatgatcatacaaattggtggtggtttgatagtaccaaatttatgccaagatag 39698038  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  39698039 gagaactaaagtctagaaaaaactcaaacgtgta 39698072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 5869323 - 5869446
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||| ||||||||| |||  ||| |||||||||  ||||||    
T  5869323 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattttaaaaattg-tggtggtttgatagtatc-aatttatgtacagaaag 5869420  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
      |||||| |||||| ||||||||||    
T  5869421 gagaactaaagtctaaaaaaaactca 5869446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 23567275 - 23567408
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||| |||  | || ||||||||  ||| |     
T  23567275 ttgttgtgatactttcaatgaaatagtatttcaaattgactgattaagtgattatacaaattgggggtggtttgatagtagcagatttatgttcagataa 23567374  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| |||||||||||| |||| |||||||    
T  23567375 gagaactaaagtctagaaaaacctcaaacgtgta 23567408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 43926324 - 43926445
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||   |||||||| |||  |||  |||||| |  | ||||    
T  43926324 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaattatgggtggtttgataggatccgatttatatacaaaaag 43926423  T
Q  127 tggaactagagtctagaaaaaa 148  Q
    | ||||||||||||||||||||    
T  43926424 tagaactagagtctagaaaaaa 43926445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 3471663 - 3471572
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt 118  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||| ||||||||    
T  3471663 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgatagaatcacatttatgt 3471572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 18420610 - 18420744
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| |  ||||||| |||  |||  ||||||||  | ||||    
T  18420610 ttgttgtgattctttcaatgaaacagcttttcaaattgactgattaagtgattatacaaattaagtgtggtttgataggatctgatttatgtacaaaaag 18420709  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||||| | |||||||||| |||||||    
T  18420710 gagaactagagtctggaaaaaaactcaaacgtgta 18420744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 12531622 - 12531489
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||  ||| |||| |||  |  | ||||||||   || ||    
T  12531622 ttgttgtgattctttcaatgaaatagatttttaaattgactgattaagtgattatacaaattggaggtagtttgatagtacaagatttatgttcggatag 12531523  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| ||||||||||||||||| |||||||    
T  12531522 gagaactaaagtctagaaaaaactcaaacgtgta 12531489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 43968071 - 43968205
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||||    ||||||| |||  |||  ||||||||  | ||||    
T  43968071 ttgttgtgattctttcaatgaaataacttttcaaattgattgattaagtgattatacaaattaggagtggtttgataggatccgatttatgtacaaaaag 43968170  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||||||| |||||||||| |||||||    
T  43968171 gagaactagagtctagaaaaaaactcaaacgtgta 43968205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 18112179 - 18112118
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||    
T  18112179 ttgttgtgattctttcaataaaatagttttccaaattgactgattaagtgattatacaaatt 18112118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 13585362 - 13585228
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||||||   |||||||| |||  |||  |||||||| ||| |||    
T  13585362 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaattgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaaa 13585263  T
Q  126 gtggaactagagtctag-aaaaaactcatacgtgta 160  Q
    |   ||||||||||||| |||||||||| |||||||    
T  13585262 g-aaaactagagtctagaaaaaaactcaaacgtgta 13585228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 1004122 - 1004060
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagttttt-caaattgactgattaagtgattattcaaatt 88  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  1004122 ttgttgtgattctttcaatgaaataattttttcaaattgactgattaagtgattatacaaatt 1004060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 30915288 - 30915410
Alignment:
Q  27 ttgttgtgattctttc-aatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaa 125  Q
    |||||||||||||||  |||||||||| |||||||||||||||||||||||||||| || ||||  || |||||  || ||||| || |||||| |||||    
T  30915288 ttgttgtgattctttttaatgaaatagcttttcaaattgactgattaagtgattatacatattggaggaggtttggtagcatcagatctatgtccagaaa 30915387  T
Q  126 gtggaactagagtctagaaaaaa 148  Q
    |  ||| ||||||||| ||||||    
T  30915388 ggagaattagagtctaaaaaaaa 30915410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 27074637 - 27074546
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt 118  Q
    ||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||| ||||||   |||||||| |||  |||| ||||||||    
T  27074637 ttgttgtgattttttcaatgaaatagacttttaaattgactgattaagtgattatacaaattaggggtggtttgataggatcagatttatgt 27074546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 36515157 - 36515229
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacat 107  Q
    ||||||||||||||||||||||||||||||| ||        ||||| |||||||||||||||||||||||||||||||||    
T  36515157 ttgttgtgattctttcaatgaaatagttttttaa--------attaactgattattcaaattgatggtggtttaataacat 36515229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 7858148 - 7858014
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| |||||| ||  ||| |||||||||||||||||||||||| ||||||   |||| ||| |||  |||  ||||||||  | ||||    
T  7858148 ttgttgtgattctttaaatgaattaactttccaaattgactgattaagtgattatacaaattaggggtgatttgataggatccgatttatgttcaaaaag 7858049  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||||||| |||||||||| |||||||    
T  7858048 gagaactagagtctagaaaaaaactcaaacgtgta 7858014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 42951774 - 42951831
Alignment:
Q  31 tgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||    
T  42951774 tgtgattctttcaataaaataacttttcaaattgactgattaagtgattatacaaatt 42951831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 44665047 - 44665168
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  ||| ||||| ||||||||||||||| || ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  44665047 ttgttgtgattctttcaatgaaataactttccaaatagactgattaagtgatgatacaaattagaggtggtttgataggatccgatttatgtacaaaaag 44665146  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||| ||||||    
T  44665147 gagaactagagtctataaaaaa 44665168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 42076165 - 42076046
Alignment:
Q  33 tgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataac-atcaaatttatgtcaagaaagtggaa 131  Q
    ||||||||||||||  |||| |||||||||||| ||||||||| ||||| |||||||||| | |||| ||| | |  ||||||||||  ||||||| |||    
T  42076165 tgattctttcaatgttatagcttttcaaattgattgattaagttattatacaaattgatgatagtttgatagcaaaaaaatttatgttcagaaagtagaa 42076066  T
Q  132 ctagagtctagaaaaaactc 151  Q
     ||||||||| ||| |||||    
T  42076065 ttagagtctaaaaagaactc 42076046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 29372420 - 29372358
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattg 89  Q
    ||||||| |||||||||||  ||||  ||| |||||||||||||||| ||||||| |||||||    
T  29372420 ttgttgtcattctttcaattgaataactttccaaattgactgattaaatgattatacaaattg 29372358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 30915367 - 30915488
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||| ||||| ||| ||||||||||||||| ||||||    
T  30915367 ttgttgtgattctttcaattaaatagcttttcaaattgactgattaagtaattatacaaattgatgggggtttgatagcatcaaatttatgtccagaaag 30915466  T
Q  127 tggaactagagtctagaaaaaa 148  Q
    | ||||||||||||||||||||    
T  30915467 tagaactagagtctagaaaaaa 30915488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 3748569 - 3748690
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||| | ||||    
T  3748569 ttgttgtgattctttcaatgaaatagcttttcaaattgattgattaagtgattatacaaattgatggcggtttgatagcatcaaatttatgtccaaaaag 3748668  T
Q  127 tggaactagagtctagaaaaaa 148  Q
    | |||||||| |||| ||||||    
T  3748669 tagaactagaatctaaaaaaaa 3748690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 7341228 - 7341139
Alignment:
Q  71 taagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaactagagtctagaaaaaactcatacgtgta 160  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  7341228 taagtgattattcaaattgacggtggtttaataacatcaaatttatgtccagaaagtggaactagagtctagaaaaaactcatatgtgta 7341139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 12614717 - 12614850
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  12614717 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaag 12614816  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      ||||||||||||| |||||||||| |||||||    
T  12614817 gagaactagagtctaaaaaaaactcaaacgtgta 12614850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 2618418 - 2618285
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  |||||||| ||| |||    
T  2618418 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaaa 2618319  T
Q  126 gtggaactagagtctagaaaaaactcatacgtgta 160  Q
    |  |||||| ||||||||||||||||| |||||||    
T  2618318 g-agaactaaagtctagaaaaaactcaaacgtgta 2618285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 628096 - 628215
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||| |||| |||  |||| |||  | ||||    
T  628096 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataagatctgatttgtgtacaaaaag 628195  T
Q  127 tggaactagagtctagaaaa 146  Q
      ||||||||||||||||||    
T  628196 gtgaactagagtctagaaaa 628215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 6360822 - 6360690
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||| | |||||||| |||  |||  |||||||| ||| |||    
T  6360822 ttgttgtgattctttcaatgaa-taacttttcaaattgactgattaagtgattatacaaattaagggtggtttgataggatccgatttatgtgcaaaaaa 6360724  T
Q  126 gtggaactagagtctagaaaaaactcatacgtgta 160  Q
    |  |||||||||||||||||||||||| |||||||    
T  6360723 g-agaactagagtctagaaaaaactcaaacgtgta 6360690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 29308468 - 29308601
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| ||||| | ||||| | ||||||| |||  | |||||||||||| ||| ||    
T  29308468 ttgttgtgattacttcaatgaaatagtttttcaaattgactgattaagtcattataccaattggtagtggtttgatagtaccaaatttatgtccagatag 29308567  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
       ||||| ||| ||||||||||||| |||||||    
T  29308568 aaaaactaaagtttagaaaaaactcaaacgtgta 29308601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 31861064 - 31860933
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||  |||||||| || | | || ||||||||| ||| ||    
T  31861064 ttgttgtgattctttcaatgaaatagcttttcaaattgactgattaagtaattatacaaattg-gggtggtttgat-ataccagatttatgtccagatag 31860967  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| |||||||||||| |||| |||||||    
T  31860966 aagaactaaagtctagaaaaacctcaaacgtgta 31860933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 159
Target Start/End: Complemental strand, 19231675 - 19231544
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||| ||||||||  |||| |||||||||||| |||||||||||| || |||||||| ||| |||| ||| || || ||||||||| ||||||    
T  19231675 ttgttgtgattttttcaatgtcatagcttttcaaattgattgattaagtgat-atacaaattgaaggtagtttgatagcaccagatttatgtccagaaag 19231577  T
Q  127 tggaactagagtctagaaaaaactcatacgtgt 159  Q
    | |||||| | ||||||||||||||| ||||||    
T  19231576 tagaactaaactctagaaaaaactcaaacgtgt 19231544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 1690634 - 1690767
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||||||  |||||||||||| |||| |||||||||| ||||||| ||||||||| |||  | || ||||||||| | | ||    
T  1690634 ttgttgtgattctttcaatgaaataaattttcaaattgattgatcaagtgattatacaaattggtggtggtttgatagtaccagatttatgtccaaatag 1690733  T
Q  127 tggaactagagtctagaaaaaactcatacgtgta 160  Q
      |||||| | | ||||||||||||| |||||||    
T  1690734 gagaactaaaatttagaaaaaactcaaacgtgta 1690767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 1093042 - 1093166
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||| |||||||| |||| ||||||||||||| ||| ||||| | ||||| | ||||||| |||  | |||||||||||| ||| ||    
T  1093042 ttgttgtgattctttca-tgaaatagctttttaaattgactgatttagtcattataccaattggtagtggtttgatagtaccaaatttatgtccagatag 1093140  T
Q  127 tggaactagagtctagaaaaaactca 152  Q
      |||||| |||||||||||||||||    
T  1093141 gagaactaaagtctagaaaaaactca 1093166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 6294288 - 6294209
Alignment:
Q  81 ttcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaactagagtctagaaaaaactcatacgtgta 160  Q
    |||||||||||| |||||| ||| ||||||||||||| | | ||||| ||||||||||||||||||||||||||| ||||    
T  6294288 ttcaaattgatgatggtttgatagcatcaaatttatgcccaaaaagtagaactagagtctagaaaaaactcatacatgta 6294209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 14893418 - 14893517
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||||| |  || |||| ||| ||||| |||||| || ||||||    
T  14893418 ttgttgtgattcttttaacgaaatagtttttcaaattgactgattaagtaattatacaaattcagagttgtttgatagcatcagatttatatctagaaag 14893517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 57751 - 57617
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||| |||||||||| |||  ||||||||||||||||||||||| ||||||   |||||||| |||  |||| ||||||||  | ||||    
T  57751 ttgttgtgattctttgaatgaaatagctttctaaattgactgattaagtgattatacaaattatgggtggtttgataggatcagatttatgtacaaaaag 57652  T
Q  127 tggaactagagtct-agaaaaaactcatacgtgta 160  Q
      |||||||||| | | |||||||||| |||||||    
T  57651 gagaactagagtttaaaaaaaaactcaaacgtgta 57617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 6754269 - 6754144
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgt-caagaaa 125  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||   | |||||| |||  |||  |||||||| ||| |||    
T  6754269 ttgttgtgattctttcaatgaaatagctttccaaattgactgattaagtgactatacaaattagggatggtttgataggatccgatttatgtacaaaaaa 6754170  T
Q  126 gtggaactagagtctagaaaaaactca 152  Q
    |  |||||||| |||||||||||||||    
T  6754169 g-agaactagaatctagaaaaaactca 6754144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 7525167 - 7525301
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||| |||||  ||| |||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | || |    
T  7525167 ttgttgtgattctttcaataaaataactttccaaattgactgattaagtgattatacaaattatgggtggtttgataggatccgatttatgtacaaaatg 7525266  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||||||| |||||||||| |||||||    
T  7525267 gagaactagagtctagaaaaaaactcaaacgtgta 7525301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 29401203 - 29401149
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattat 81  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29401203 ttgttgtgattctttcaatgaaataacttttcaaattgactgattaagtgattat 29401149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 29149466 - 29149345
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    |||||||||||||||||||||| ||  ||| |||||||||||||||||||||||| ||||||    ||||||| |||  |||  ||||||||  | ||||    
T  29149466 ttgttgtgattctttcaatgaactaactttccaaattgactgattaagtgattatacaaattaggtgtggtttgataggatccgatttatgtacaaaaag 29149367  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  29149366 gagaactagagtctagaaaaaa 29149345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 160
Target Start/End: Original strand, 3514851 - 3514985
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||||||||||||| |||| ||| |||||||| |||||| |||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||    
T  3514851 ttgttgtgattctttcaatgatatagctttccaaattgaatgattacgtgattatacaaattaggggtggtttgataggatctgatttatgtacaaaaag 3514950  T
Q  127 tggaactagagtctag-aaaaaactcatacgtgta 160  Q
      |||||||||| ||| |||||||||| |||||||    
T  3514951 gagaactagagtttagaaaaaaactcaaacgtgta 3514985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 22503798 - 22503752
Alignment:
Q  35 attctttcaatgaaatagtttttcaaattgactgattaagtgattat 81  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  22503798 attctttcaacgaaatagtttttcaaattgactgattaagtgattat 22503752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 350478 - 350385
Alignment:
Q  27 ttgttgtgattctttcaat-gaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtc 119  Q
    |||||||||||||||  || ||||||| |||  ||||||||||||| |||||||||  |||||||||||||||| ||| ||||| |||||||||    
T  350478 ttgttgtgattctttttattgaaatagctttcgaaattgactgattgagtgattatataaattgatggtggtttgatagcatcatatttatgtc 350385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 21946170 - 21946109
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    ||||| || ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||    
T  21946170 ttgttatggttctttcaatgaaatagcttttcaaatagactgattaagtgattatacaaatt 21946109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 31234956 - 31234862
Alignment:
Q  45 tgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtggaactagagtcta 141  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||  | |||||| ||| |||  ||||  |||| | ||||| |||||||||||||    
T  31234956 tgaaatagcttttcaaattgattgattaagtgattatacaaattg--gatggtttgatagcattgaattcttgtctaaaaagtagaactagagtcta 31234862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 6294317 - 6294279
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattga 65  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  6294317 ttgttgtgattctttcaatgaaattgcttttcaaattga 6294279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 1327638 - 1327594
Alignment:
Q  45 tgaaatagtttttcaaattgactgattaagtgattattcaaattg 89  Q
    ||||||||||||  ||||||| ||||||||||||||| |||||||    
T  1327638 tgaaatagttttctaaattgattgattaagtgattatacaaattg 1327594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 7341126 - 7341094
Alignment:
Q  177 gtaacatataattttttaatttaagtgggggtg 209  Q
    |||||||||||||||||||||||||||| ||||    
T  7341126 gtaacatataattttttaatttaagtggtggtg 7341094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 16771 - 16639
Alignment:
Q  29 gttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtg 128  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||| |||  |||  ||||||||  | ||||      
T  16771 gttgtgattctttcaatgaaatagcttttcaaattgactgattaagtgattatacaaattaggggtggtttgataggatccgatttatgtacaaaaagga 16672  T
Q  129 gaactagagtctag-aaaaaactcatacgtgta 160  Q
    |||||||||||||| |||||||||| |||||||    
T  16671 gaactagagtctagaaaaaaactcaaacgtgta 16639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 8399 - 8521
Alignment:
Q  30 ttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaagtgg 129  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||   |||||||| ||| ||| |  |||||||| ||||||       
T  8399 ttgtgattctttcaatgaaatagttttcgaaattgactgattaattgattatacaaattatgggtggtttgatagcataaggtttatgtccagaaaggaa 8498  T
Q  130 aactagagtctagaaaaaactca 152  Q
    | ||||||||||| | |||||||    
T  8499 atctagagtctagtagaaactca 8521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 17133 - 17194
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaatt 88  Q
    |||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||    
T  17133 ttgttgtgattctttcaacgaaatagctttccaaattgactgattaagtgattatacaaatt 17194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 148
Target Start/End: Original strand, 46174 - 46295
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattgactgattaagtgattattcaaattgatggtggtttaataacatcaaatttatgtcaagaaag 126  Q
    ||||||||||| ||||||||||||||  || |||||||||||||||||||||||| ||||||   |||||||| |||  |||| || |||||  | |||     
T  46174 ttgttgtgattatttcaatgaaatagacttccaaattgactgattaagtgattatccaaattatgggtggtttgataggatcagatatatgtataaaaat 46273  T
Q  127 tggaactagagtctagaaaaaa 148  Q
      ||||||||||||||||||||    
T  46274 gagaactagagtctagaaaaaa 46295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 22809 - 22844
Alignment:
Q  30 ttgtgattctttcaatgaaatagtttttcaaattga 65  Q
    |||||||||||||||||||||||||||||| |||||    
T  22809 ttgtgattctttcaatgaaatagtttttcatattga 22844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 1124 - 1086
Alignment:
Q  27 ttgttgtgattctttcaatgaaatagtttttcaaattga 65  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  1124 ttgttgtgattctttcaatgaaatagctttccaaattga 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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