View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11885_low_44 (Length: 245)
Name: NF11885_low_44
Description: NF11885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11885_low_44 |
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Alignment Details
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 6 - 229
Target Start/End: Complemental strand, 37096920 - 37096697
Alignment:
| Q |
6 |
cagagaaaacgtcactggaagccttctgaggatatgcaatttgctgtgatggatgccacaaattactacatggaaaatgtcatgtgcaagccattcccta |
105 |
Q |
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| T |
37096920 |
cagagaaaacgtcactggaagccttctgaggatatgcaatttgctgtgatggatgccacaaattactacatggaaaatgtcatgtgcaagccattcccta |
37096821 |
T |
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| Q |
106 |
tggatgccatgcctatgcttctttagaacattaatcctctcaccttattcagtaaaaccctatccattttaaaattacctaggttgtgaaggtacaatat |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37096820 |
tggatgccatgcctatgcttctttagaacattaatcctctcaccttattcagtaaaaccctatccattttaaaattacctaggttgtgaaggtacaatat |
37096721 |
T |
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| Q |
206 |
atattaattaatgtatgttactgt |
229 |
Q |
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|||||||||||||||||||||||| |
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| T |
37096720 |
atattaattaatgtatgttactgt |
37096697 |
T |
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