View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11886_high_4 (Length: 439)

Name: NF11886_high_4
Description: NF11886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11886_high_4
NF11886_high_4
[»] chr8 (1 HSPs)
chr8 (1-283)||(10414322-10414616)


Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 10414322 - 10414616
Alignment:
Q  1 aggatatatatccatgatttgaattcacatatctcaaaccaacaatatatattttaaaataggattttgaatataattttctcatctctaaatgtaaata 100  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10414322 aggatatatatccacgatttgaattctcatatctcaaacgaacaatctatattttaaaataggattttgaatataattttctcatctctaaatgtaaata 10414421  T
Q  101 attggatgtatgatctagactatgcaatattgatcggataacttatctttgaagatgagttaatcagattcaaaacttaattttaaaaatgcgagttgct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  10414422 attggatgtatgatctagactatgcaatattgatcggataacttatatttgaagatgagctaatcagattcaaaacttaattttgaaaatgcgagttgct 10414521  T
Q  201 tgtcaacttcggttct------------ttatctaactcactttttccaataaatattcttctattagttgaaatccaaatgcaatacactaaat 283  Q
    |||||||||||||  |            |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  10414522 tgtcaacttcggtcatgctagtagcatattatctaactcactttttccaataaatattcttctattagttaaaatccaaatggaatacactaaat 10414616  T

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