View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11886_low_7 (Length: 356)

Name: NF11886_low_7
Description: NF11886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11886_low_7
NF11886_low_7
[»] chr3 (28 HSPs)
chr3 (18-356)||(11907105-11907443)
chr3 (284-356)||(26141560-26141632)
chr3 (281-349)||(33118886-33118954)
chr3 (287-356)||(26754698-26754767)
chr3 (281-349)||(11095388-11095456)
chr3 (282-349)||(49607412-49607479)
chr3 (284-354)||(51419390-51419460)
chr3 (284-353)||(45058584-45058652)
chr3 (283-356)||(48375734-48375807)
chr3 (288-349)||(52629304-52629365)
chr3 (284-349)||(53982011-53982076)
chr3 (282-354)||(11347952-11348024)
chr3 (281-349)||(54868930-54868998)
chr3 (282-349)||(36707459-36707526)
chr3 (283-349)||(17470404-17470470)
chr3 (284-354)||(20764945-20765015)
chr3 (284-349)||(33644200-33644265)
chr3 (282-349)||(27714926-27714993)
chr3 (289-352)||(30801765-30801828)
chr3 (284-353)||(14623870-14623939)
chr3 (289-349)||(31456694-31456754)
chr3 (283-347)||(45320369-45320433)
chr3 (282-356)||(35093583-35093657)
chr3 (284-354)||(47531865-47531935)
chr3 (284-345)||(8076393-8076454)
chr3 (283-355)||(36331407-36331479)
chr3 (280-320)||(41189828-41189868)
chr3 (289-349)||(48587126-48587186)
[»] chr1 (23 HSPs)
chr1 (282-356)||(32813245-32813319)
chr1 (282-349)||(2581913-2581980)
chr1 (284-354)||(41608523-41608593)
chr1 (284-354)||(50591030-50591100)
chr1 (284-349)||(9474911-9474976)
chr1 (282-356)||(5959028-5959102)
chr1 (282-349)||(38632356-38632423)
chr1 (284-354)||(26440734-26440804)
chr1 (284-349)||(3000319-3000384)
chr1 (284-356)||(37649198-37649270)
chr1 (281-349)||(49811562-49811630)
chr1 (282-349)||(38595152-38595219)
chr1 (284-354)||(47748443-47748512)
chr1 (283-349)||(51898718-51898784)
chr1 (284-349)||(27564770-27564835)
chr1 (284-345)||(47452359-47452420)
chr1 (284-349)||(48716317-48716382)
chr1 (284-356)||(6260870-6260942)
chr1 (282-349)||(8346423-8346490)
chr1 (285-355)||(44453980-44454050)
chr1 (284-349)||(43132-43197)
chr1 (284-349)||(3302568-3302633)
chr1 (282-354)||(23597121-23597193)
[»] chr8 (30 HSPs)
chr8 (283-352)||(17443824-17443893)
chr8 (284-349)||(12831047-12831112)
chr8 (282-354)||(16383375-16383447)
chr8 (282-354)||(34307214-34307286)
chr8 (282-349)||(10284666-10284733)
chr8 (283-349)||(44507122-44507188)
chr8 (283-354)||(32032724-32032794)
chr8 (280-354)||(4854893-4854967)
chr8 (281-354)||(24307823-24307896)
chr8 (284-354)||(30479504-30479574)
chr8 (284-349)||(504156-504221)
chr8 (284-349)||(1179975-1180040)
chr8 (284-349)||(15048217-15048281)
chr8 (284-349)||(15197333-15197398)
chr8 (282-354)||(16056431-16056503)
chr8 (284-352)||(14055624-14055692)
chr8 (281-349)||(14547919-14547987)
chr8 (282-354)||(24307627-24307699)
chr8 (286-349)||(10621122-10621185)
chr8 (282-349)||(42221513-42221580)
chr8 (279-349)||(23122632-23122702)
chr8 (283-349)||(37038478-37038544)
chr8 (284-349)||(34012331-34012396)
chr8 (284-349)||(40423978-40424043)
chr8 (289-349)||(5957835-5957895)
chr8 (284-356)||(38229429-38229500)
chr8 (284-356)||(43414609-43414681)
chr8 (281-356)||(15258957-15259032)
chr8 (284-354)||(20074964-20075034)
chr8 (289-321)||(9122200-9122232)
[»] chr4 (30 HSPs)
chr4 (282-354)||(19670746-19670818)
chr4 (282-349)||(480482-480549)
chr4 (283-352)||(28480300-28480369)
chr4 (283-352)||(28481175-28481244)
chr4 (283-352)||(28482050-28482119)
chr4 (284-349)||(31910192-31910257)
chr4 (281-354)||(55475188-55475261)
chr4 (284-352)||(6034044-6034112)
chr4 (282-349)||(42044402-42044469)
chr4 (281-349)||(48183084-48183152)
chr4 (282-349)||(50052463-50052530)
chr4 (281-354)||(29547989-29548062)
chr4 (284-349)||(3481654-3481719)
chr4 (284-349)||(11511497-11511562)
chr4 (284-349)||(40574779-40574844)
chr4 (283-356)||(44536774-44536846)
chr4 (283-356)||(50813920-50813993)
chr4 (284-345)||(54473572-54473633)
chr4 (281-349)||(23608232-23608300)
chr4 (282-354)||(32766956-32767028)
chr4 (283-354)||(47986207-47986278)
chr4 (284-356)||(50526199-50526271)
chr4 (284-354)||(55079744-55079814)
chr4 (284-349)||(41236347-41236412)
chr4 (288-349)||(53352601-53352661)
chr4 (282-321)||(29239884-29239923)
chr4 (284-354)||(8343193-8343263)
chr4 (302-354)||(17983773-17983825)
chr4 (284-320)||(29535377-29535413)
chr4 (281-349)||(29977882-29977950)
[»] chr2 (31 HSPs)
chr2 (282-356)||(26891532-26891606)
chr2 (284-354)||(43490121-43490191)
chr2 (281-349)||(9058477-9058545)
chr2 (281-349)||(10249417-10249485)
chr2 (283-349)||(32505683-32505749)
chr2 (284-354)||(40613932-40614002)
chr2 (284-349)||(13438343-13438408)
chr2 (284-356)||(38732354-38732426)
chr2 (282-354)||(15428770-15428842)
chr2 (289-349)||(28863460-28863520)
chr2 (282-345)||(33436139-33436202)
chr2 (282-349)||(38273177-38273244)
chr2 (283-349)||(7465770-7465836)
chr2 (284-349)||(4060685-4060750)
chr2 (284-349)||(17473020-17473085)
chr2 (284-349)||(28381690-28381755)
chr2 (284-349)||(40701478-40701543)
chr2 (281-349)||(17823781-17823849)
chr2 (289-349)||(19930855-19930915)
chr2 (290-353)||(3439985-3440048)
chr2 (284-355)||(17820033-17820104)
chr2 (282-349)||(30915461-30915528)
chr2 (283-354)||(36168835-36168906)
chr2 (283-349)||(5574523-5574589)
chr2 (284-349)||(27864704-27864769)
chr2 (282-354)||(45097765-45097837)
chr2 (282-349)||(38882849-38882915)
chr2 (289-356)||(41575142-41575209)
chr2 (283-349)||(2533123-2533188)
chr2 (282-354)||(42257191-42257263)
chr2 (302-354)||(2997517-2997569)
[»] chr7 (35 HSPs)
chr7 (284-349)||(21234401-21234466)
chr7 (281-349)||(7389386-7389454)
chr7 (282-349)||(38837215-38837282)
chr7 (283-353)||(22343360-22343430)
chr7 (284-354)||(46374832-46374902)
chr7 (284-349)||(38267040-38267105)
chr7 (282-349)||(19436222-19436289)
chr7 (281-356)||(36208170-36208245)
chr7 (283-354)||(41915740-41915811)
chr7 (283-349)||(36361948-36362014)
chr7 (282-352)||(38044195-38044265)
chr7 (284-352)||(8238212-8238281)
chr7 (285-354)||(35522877-35522946)
chr7 (283-356)||(46033829-46033902)
chr7 (289-349)||(3694372-3694432)
chr7 (282-349)||(10343598-10343665)
chr7 (283-347)||(26296643-26296707)
chr7 (284-340)||(31735884-31735940)
chr7 (282-356)||(7727904-7727978)
chr7 (282-349)||(8080418-8080485)
chr7 (282-349)||(40957705-40957772)
chr7 (283-349)||(3434561-3434627)
chr7 (284-354)||(32564456-32564526)
chr7 (283-349)||(36362025-36362091)
chr7 (284-349)||(19329842-19329907)
chr7 (284-345)||(35137533-35137594)
chr7 (289-349)||(3784000-3784060)
chr7 (284-347)||(4999551-4999614)
chr7 (282-321)||(18207178-18207217)
chr7 (284-354)||(39255953-39256023)
chr7 (282-320)||(11044186-11044224)
chr7 (283-312)||(12310905-12310934)
chr7 (284-356)||(41423682-41423754)
chr7 (289-345)||(32951532-32951588)
chr7 (284-352)||(40846145-40846213)
[»] chr6 (14 HSPs)
chr6 (281-354)||(15990072-15990145)
chr6 (283-356)||(31976247-31976320)
chr6 (282-354)||(30341390-30341462)
chr6 (284-354)||(15508054-15508124)
chr6 (282-346)||(6209503-6209567)
chr6 (291-349)||(32869685-32869743)
chr6 (289-349)||(22880693-22880753)
chr6 (282-349)||(31110796-31110861)
chr6 (284-349)||(17598554-17598619)
chr6 (284-349)||(29857827-29857892)
chr6 (283-349)||(11427615-11427683)
chr6 (296-349)||(31109435-31109488)
chr6 (284-353)||(31953061-31953130)
chr6 (282-318)||(15832575-15832611)
[»] chr5 (22 HSPs)
chr5 (280-349)||(15409645-15409714)
chr5 (282-354)||(3921295-3921367)
chr5 (284-356)||(28177775-28177847)
chr5 (284-349)||(40145407-40145472)
chr5 (289-349)||(18520919-18520979)
chr5 (283-354)||(2252198-2252269)
chr5 (282-349)||(31008986-31009053)
chr5 (282-349)||(36732977-36733044)
chr5 (283-349)||(2740273-2740339)
chr5 (284-354)||(26720516-26720586)
chr5 (284-354)||(26990265-26990335)
chr5 (284-349)||(35943927-35943992)
chr5 (283-356)||(6679697-6679770)
chr5 (284-349)||(35785199-35785264)
chr5 (281-356)||(39688925-39689000)
chr5 (289-343)||(36875644-36875698)
chr5 (284-349)||(14831814-14831879)
chr5 (284-349)||(33149673-33149738)
chr5 (284-349)||(42414337-42414402)
chr5 (282-349)||(13811650-13811717)
chr5 (284-345)||(6260040-6260101)
chr5 (281-349)||(9603810-9603878)
[»] scaffold0237 (1 HSPs)
scaffold0237 (284-349)||(4029-4094)
[»] scaffold0321 (1 HSPs)
scaffold0321 (282-349)||(10144-10211)
[»] scaffold1268 (1 HSPs)
scaffold1268 (284-349)||(964-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (284-349)||(964-1029)
[»] scaffold0018 (1 HSPs)
scaffold0018 (300-356)||(152514-152570)


Alignment Details
Target: chr3 (Bit Score: 331; Significance: 0; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 18 - 356
Target Start/End: Original strand, 11907105 - 11907443
Alignment:
Q  18 aaatctggattgttggatctcacatgacgactttcgttaataaatctggcttgttttaaaaattcaagaccttggtcaaacattttaaataaggtattat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11907105 aaatctggattgttggatctcacatgacgactttcgttaataaatctggcttgttttaaaaattcaagaccttggtcaaacattttaaataaggtattat 11907204  T
Q  118 aataaattgaccacgttagacctaagatctgtcagtaatgatgttgaatgatctttgagtagaatactttcgtctgtattagtcttcttctttgggaaaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11907205 aataaattgaccacgttagacctaagatctgtcagtaatgatgttgaatgatctttgagtagaatactttcgtccgtattagtcttcttctttgggaaaa 11907304  T
Q  218 caaggggtggtgtatatgcacacacttcaactcttaagttagtaaacgttgtaggggatgaggtaagagttatgatacatagacacccttaggtgacaat 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11907305 caaggggtggtgtatatgcacacacttcaactcttaagttagtaaacgttgtaggggatgaggtaagagttatgatacatagacacccttaggtgacaat 11907404  T
Q  318 acacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  11907405 acacacctgaacactcacacaaaaatctgacatgtggtc 11907443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 26141632 - 26141560
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| ||||| ||||||||||||||||| ||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtc 26141560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 33118954 - 33118886
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  |||| ||||||||||| |||||    
T  33118954 taagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgaca 33118886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 356
Target Start/End: Original strand, 26754698 - 26754767
Alignment:
Q  287 ttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||| |||||||||||||||||| |||||||| |||| |||  ||||||||||||||||||||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtc 26754767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 11095456 - 11095388
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  11095456 taagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 11095388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 49607412 - 49607479
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  49607412 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 49607479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 51419460 - 51419390
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||||| |||||| ||||||||||  ||| ||||| ||||||||||||||||| ||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtgg 51419390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 353
Target Start/End: Complemental strand, 45058652 - 45058584
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtg 353  Q
    ||||||||||||||| ||||||||||||| |||||||| |||| |||| |||| ||||||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacacccttg-acacccacataaaaatctgacatgtg 45058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 48375807 - 48375734
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||| |  || ||||||||||||| |||||||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtc 48375734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 349
Target Start/End: Original strand, 52629304 - 52629365
Alignment:
Q  288 tatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 52629365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 53982011 - 53982076
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 53982076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 11348024 - 11347952
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||||||| |||||||||||||||||  |||  |||  ||||||||||||||||| ||||    
T  11348024 aagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtgg 11347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 54868998 - 54868930
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||||||||||||||||||||| ||||||||  ||  |||| |||||||||||||||||    
T  54868998 taagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 54868930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 36707526 - 36707459
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||| |||||||||||||||||||| |||  |||  |||||||||||||||||    
T  36707526 aagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgaca 36707459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 17470404 - 17470470
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| |||||||||||||||| ||||||| ||||||||  || ||||| |||||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgaca 17470470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 20765015 - 20764945
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||| ||||||||| |||||||||  ||||||| ||| ||||| ||||||||||||||||| ||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtgg 20764945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 33644200 - 33644265
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||||||| |||| |||||||| |||  |||| |||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgaca 33644265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 27714993 - 27714926
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||| |||||||  ||||||| |||  |||| |||||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgaca 27714926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 30801828 - 30801765
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    ||||||||||||||||||||||||| ||||||| |||  | || ||||||||||| ||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgt 30801765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 353
Target Start/End: Complemental strand, 14623939 - 14623870
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtg 353  Q
    |||| |||||||||||||| ||||||||| |||||||| | |  |||| |||| ||||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtg 14623870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 31456694 - 31456754
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||| |||| | |||||||| |||  |||| |||||||||||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgaca 31456754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 45320369 - 45320433
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctga 347  Q
    ||||||||| || || |||| ||||| |||||||||||| | | |||||||||||||||||||||    
T  45320369 agagttatgttaaattgacaaccttaagtgacaatacactcattaacactcacacaaaaatctga 45320433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 35093583 - 35093657
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatac-acacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||| |||||||||||| | |||||||||||||| ||| ||| |||  ||| ||||||||||||||||||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttg-acatccacgcaaaaatctgacatgtggtc 35093657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 47531865 - 47531935
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||||| |||||| || ||||||||  || ||||  ||||||| ||||||||| ||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtgg 47531935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 8076393 - 8076454
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatct 345  Q
    |||| |||||||||| ||||||||||||| || ||||| |||  |||| |||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatct 8076454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 36331479 - 36331407
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggt 355  Q
    |||||||||||||||| |||||||||| || |||| ||| | |  |||  |||||||||||||| ||||||||    
T  36331479 agagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgtggt 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 41189868 - 41189828
Alignment:
Q  280 gtaagagttatgatacatagacacccttaggtgacaataca 320  Q
    ||||||||||||||||||| ||| ||||||||| |||||||    
T  41189868 gtaagagttatgatacatatacatccttaggtggcaataca 41189828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 48587186 - 48587126
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||| ||||||||||| |||||||| |||  ||||  ||| ||||||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgaca 48587126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 32813245 - 32813319
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||| ||||| ||||||||||||||||| ||||||    
T  32813245 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtc 32813319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 2581913 - 2581980
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  2581913 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 2581980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 41608593 - 41608523
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||| ||| ||||||||| |||||||| | |  |||||||||||||||||||||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtgg 41608523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 50591100 - 50591030
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||| ||||||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 50591030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 9474976 - 9474911
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 9474911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 5959102 - 5959028
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||||| ||||||||| ||| ||||||| | |||| |||| ||||||||||||||||||||||||    
T  5959102 aagagttatgatacataaacacccttaagtggcaatacacctcttg-acacccacacaaaaatctgacatgtggtc 5959028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 38632423 - 38632356
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||||||||||| ||||||||  || ||||  |||||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgaca 38632356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 26440734 - 26440804
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||| |||| ||||||| |||||| ||||||||||| ||| ||||| ||||||||||||||||| ||||    
T  26440734 gagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtgg 26440804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 3000319 - 3000384
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||| ||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 3000384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 37649198 - 37649270
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||| |||||||||||||| | ||||||| |||||||| |||  |||| ||||||||||||||||| ||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtc 37649270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 49811630 - 49811562
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||||| ||||||| ||||||||||||||||||  ||  |||  |||||||||||||||||    
T  49811630 taagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgaca 49811562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 38595152 - 38595219
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||| ||||| ||||||| |||||||| |||  |||| |||||||||||||||||    
T  38595152 aagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgaca 38595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 47748443 - 47748512
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||| | ||||||||||| |||||||| |||| |||| || | |||||||||||||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaatacacccttg-acacccatataaaaatctgacatgtgg 47748512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 51898784 - 51898718
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| |||||||||||||| | ||||||| |||||||| |||  |||| |||||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgaca 51898718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 27564835 - 27564770
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||| ||||||||| ||||||||  ||  |||| |||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 27564770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 47452420 - 47452359
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatct 345  Q
    |||| ||||||||||||||||||||||||  ||||||| |||  |||| |||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatct 47452359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 48716382 - 48716317
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| ||||||||  ||  |||  |||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgaca 48716317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 6260870 - 6260942
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||| ||||| | |||||||||  ||||||| | ||||||| |||| |||||||| ||||||||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtc 6260942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 8346490 - 8346423
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| ||||||||||| |||| ||||||| ||||||||  ||  |||| |||||||||||||||||    
T  8346490 aagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgaca 8346423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 355
Target Start/End: Original strand, 44453980 - 44454050
Alignment:
Q  285 agttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtggt 355  Q
    |||||||||||||||||||| ||| ||| ||||||| | |||| | || |||||||||||||||||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttg-atacccacacaaaaatctgacatgtggt 44454050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 43132 - 43197
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||  |||||| |||||||||  |||  |||| |||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgaca 43197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 3302633 - 3302568
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||| ||| ||||||||||||||| |  | || |||| |||||||||||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgaca 3302568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 23597193 - 23597121
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||| |||||||||||||| | ||||||| |||||||| |||  | || |||| |||||||||||| ||||    
T  23597193 aagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtgg 23597121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 17443824 - 17443893
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    |||||||||||||||||||| ||||||||||||||||||   | ||||||||||||||||||||||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgt 17443893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 12831047 - 12831112
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgaca 12831112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 16383375 - 16383447
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| ||||||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  16383375 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 16383447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 34307214 - 34307286
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| ||||||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 34307286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 10284733 - 10284666
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||||||||||| |||||||||||| |||  |||| ||||||||||| |||||    
T  10284733 aagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgaca 10284666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 44507188 - 44507122
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| ||||||||||||||||||||||||  ||||||| ||| ||||| |||||||||||||||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgaca 44507122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 32032724 - 32032794
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||| ||||||||||||| |||||||  |||| |||  ||||||||||||||||||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatccttg-acatccacacaaaaatctgacatgtgg 32032794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 354
Target Start/End: Complemental strand, 4854967 - 4854893
Alignment:
Q  280 gtaagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||| |||||||||||||| ||||||||| |||||||| ||| |||||  ||| |||||||||| ||||||    
T  4854967 gtaagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtgg 4854893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 354
Target Start/End: Complemental strand, 24307896 - 24307823
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||||| ||||||||||||| ||||||| | |||| |||| ||||||||||||||| ||||||    
T  24307896 taagagttatgatacataaacacccttaggtggcaatacatcccttg-acacccacacaaaaatctgatatgtgg 24307823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 30479574 - 30479504
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||| ||||||||||||| |||||||| |||  |||  |||| |||||||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtgg 30479504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 504221 - 504156
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| ||||||||  ||  |||| |||||||||||||||||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 504156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 1180040 - 1179975
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||||||||||||  ||||||| |||  |||| |||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 1179975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 15048281 - 15048217
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||| ||||||||| |||||||| |||  |||| |||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacac-cacacaaaaatctgaca 15048217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 15197333 - 15197398
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||| |||||||| |||||||| |||  |||| |||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgaca 15197398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 16056503 - 16056431
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| ||| ||||| ||||||||||| | |||| |||| ||||||||||||||||||||||    
T  16056503 aagagttatgatacataaacatccttatgtgacaatacatcccttg-acacccacacaaaaatctgacatgtgg 16056431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 14055692 - 14055624
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    |||||||||||||| ||||||||||||||||||||||| | |  |||  ||||||||||||| ||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgt 14055624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 14547919 - 14547987
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| | |||||||||||||||||||||| ||||||||  ||  |||| |||||||||||||||||    
T  14547919 taagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgaca 14547987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 24307627 - 24307699
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| ||||||||||||| |||||||  | |  |||| ||||||||||||||| ||||||    
T  24307627 aagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtgg 24307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 10621185 - 10621122
Alignment:
Q  286 gttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||| |||||||||  ||||||| |||  |||| |||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 10621122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 42221513 - 42221580
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||| ||| |||||||||||||||||  | || |||| |||||||||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgaca 42221580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 349
Target Start/End: Complemental strand, 23122702 - 23122632
Alignment:
Q  279 ggtaagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||| |||||||||||||||||||| ||| ||||||||  ||  |||| |||||||||||||||||    
T  23122702 ggtatgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgaca 23122632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 37038478 - 37038544
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| |||||||||||||| | ||||||| |||||||| |||  |||| |||||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgaca 37038544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 34012396 - 34012331
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||||||||||||  ||||||| |||  |||| ||||||||||| |||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgaca 34012331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 40424043 - 40423978
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||| ||||||||||| |||||||| |||  |||  |||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgaca 40423978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 5957835 - 5957895
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||  |||||||| |||||||| |||  |||| |||||||||||||||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgaca 5957895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 38229429 - 38229500
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||  |||| |||||||| |||||| | | ||| ||| ||||||||||||||||||||||||    
T  38229429 gagttatgatacatgaacactcttaggtggcaatacgctcctga-cacccacacaaaaatctgacatgtggtc 38229500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 43414681 - 43414609
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||||||| |||||| || ||| |||| |||  |||| ||||||||||||| ||| ||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtc 43414609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 15259032 - 15258957
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||||||||||||||| || ||||| || |||||||  | || |||  |||| |||||||||||||||||||    
T  15259032 taagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtc 15258957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 20075034 - 20074964
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||| |||||||||||||| ||||||||| |||||||| |||  |||| |||| |||||| ||||| ||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtgg 20074964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 9122200 - 9122232
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacac 321  Q
    |||||||||||||||||||||||| ||||||||    
T  9122200 atgatacatagacacccttaggtggcaatacac 9122232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 19670818 - 19670746
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| ||||||||||||| |||||||| | |  |||||||||||||||||||||||||||    
T  19670818 aagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtgg 19670746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 480549 - 480482
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| ||||||||||||||||||||||||||||||||| |||  |||| |||||||||||||||||    
T  480549 aagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgaca 480482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 28480369 - 28480300
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    |||||||| ||||||||||| ||||||||||||||||||   | ||||||||||||||||||||||||||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgt 28480300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 28481244 - 28481175
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    |||||||| ||||||||||| ||||||||||||||||||   | ||||||||||||||||||||||||||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgt 28481175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 28482119 - 28482050
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    |||||||| ||||||||||| ||||||||||||||||||   | ||||||||||||||||||||||||||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgt 28482050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 31910192 - 31910257
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||| |||||||||||||||||| |||  |||| |||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgaca 31910257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 281 - 354
Target Start/End: Original strand, 55475188 - 55475261
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||||| ||| ||||||||| |||||||| |||  |||| ||||||||||||||||||||||    
T  55475188 taagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtgg 55475261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 6034044 - 6034112
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    |||| |||||||||||||||||||||||| |||||||| |||  |||| ||||||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgt 6034112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 42044469 - 42044402
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||||||||||| |||||||  |||| |||| |||||||||||||||||    
T  42044469 aagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgaca 42044402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 48183152 - 48183084
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||||||||||||||||| ||| |||||||| |||  |||| |||||||||||||||||    
T  48183152 taagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgaca 48183084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 50052530 - 50052463
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||| ||||||||| |||||||| |||  |||| |||||||||||||||||    
T  50052530 aagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 50052463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 354
Target Start/End: Complemental strand, 29548062 - 29547989
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||||| ||| ||||||||| ||||||| | |||| |||| ||||||||||||||||||||||    
T  29548062 taagagttatgatacataaacatccttaggtggcaatacatcccttg-acacccacacaaaaatctgacatgtgg 29547989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 3481654 - 3481719
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||| ||||||| |||||||| |||  |||| |||||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgaca 3481719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 11511562 - 11511497
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| |||||||| |||  |||| |||| ||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgaca 11511497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 40574779 - 40574844
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||| |||||||||  ||||||| |||  |||| |||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 40574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 44536846 - 44536774
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||||||||||| ||||  ||||||| |||||||| |||| |||  ||||||||||||||||||||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacacccttg-acatccacacaaaaatctgacatgtggtc 44536774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 50813993 - 50813920
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||||||||||| |||| ||||||||  ||||||| | |  |||| ||||||||||||||||||||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtc 50813920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 54473633 - 54473572
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatct 345  Q
    |||| |||||||||||||||||||||||||||||||||  ||  |||| |||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatct 54473572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 23608232 - 23608300
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||| |||||||||||||| |||||||||||  ||  |||| |||||||||||||||||    
T  23608232 taagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgaca 23608300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 32766956 - 32767028
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| |||| |||||||| |||||||| | |  |||| || |||||||||||||||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtgg 32767028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 47986207 - 47986278
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||| ||||||||||||| ||||||| | |||| |||  ||||||||||||||||||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttg-acatccacacaaaaatctgacatgtgg 47986278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 50526271 - 50526199
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||| |||||||||||||| | ||||||| |||||||| |||  |||| ||||||||||||||||| ||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtc 50526199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 55079814 - 55079744
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||| ||||||||||||| ||||||| | |||| |||| || |||||||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttg-acacccatacaaaaatctgacatgtgg 55079744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 41236347 - 41236412
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| ||||||||  ||  |||  |||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgaca 41236412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 53352661 - 53352601
Alignment:
Q  288 tatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||||||||| |||||||  ||| |||||  ||||||||||||||||    
T  53352661 tatgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgaca 53352601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 29239884 - 29239923
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacac 321  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  29239884 aagagtaatgatacatagacacccttaggtggcaatacac 29239923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 8343263 - 8343193
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||| ||| ||||||||| |||||||  |||  ||||  ||| |||||||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtgg 8343193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 17983825 - 17983773
Alignment:
Q  302 acccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 17983773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Original strand, 29535377 - 29535413
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaataca 320  Q
    |||||||||||||||||||  ||||||||||||||||    
T  29535377 gagttatgatacatagacaatcttaggtgacaataca 29535413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 29977882 - 29977950
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||||||| | | || |||||| |||||||| | | ||||| |||||||||||||||||    
T  29977882 taagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgaca 29977950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 26891606 - 26891532
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||||||||||||| |||||||||||| |||||||| | |  |||| ||||||||||||||||||||||||    
T  26891606 aagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtc 26891532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 43490121 - 43490191
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||| |||||||||||||||||||||| | |  |||| ||||||||||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtgg 43490191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 9058477 - 9058545
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  9058477 taagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 9058545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 10249485 - 10249417
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||  |||| |||||||||||||||||    
T  10249485 taagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgaca 10249417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 32505749 - 32505683
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| |||||||||||||||||||||||||||||||||  ||  |||| |||||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgaca 32505683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 40614002 - 40613932
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||||| ||||||||| |||||||| |||  |||| ||||||||||||||||| ||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtgg 40613932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 13438343 - 13438408
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||||||||||||||||||||  |||  |||| |||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgaca 13438408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 38732354 - 38732426
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||| ||||||||| ||||||||||| | |||| |||| ||||||||||||||||||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttg-acacccacacaaaaatctgacatgtggtc 38732426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 15428842 - 15428770
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| ||| ||||| ||| | |||||| | | ||||||||||||||||||||||||||||    
T  15428842 aagagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtgg 15428770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 28863460 - 28863520
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 28863520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 345
Target Start/End: Complemental strand, 33436202 - 33436139
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatct 345  Q
    |||||| |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||    
T  33436202 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatct 33436139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 38273244 - 38273177
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||||||||||||  ||||| || |||||||| ||| ||||| |||||||||||||||||    
T  38273244 aagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgaca 38273177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 7465836 - 7465770
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| ||||||||||||||||||||| || |||||||| |||  |||| |||||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 7465770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 4060685 - 4060750
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||||||||||||  ||  |||  |||||||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgaca 4060750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 17473020 - 17473085
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||||||||| || |||||||| |||  |||| |||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgaca 17473085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 28381755 - 28381690
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| ||||||||  ||  |||| |||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgaca 28381690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 40701478 - 40701543
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| ||||||||  ||  |||| |||||||||||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 40701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 17823781 - 17823849
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||||||| ||| ||||||||| |||||||  | ||||||| |||||||||||||||||    
T  17823781 taagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgaca 17823849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 19930915 - 19930855
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||||||||||||||| |||||||| |||  |||  |||||||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgaca 19930855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 353
Target Start/End: Original strand, 3439985 - 3440048
Alignment:
Q  290 tgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtg 353  Q
    |||||| |||||||||||||||| |||||||| | || |||| ||||||||||||| |||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtg 3440048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 17820104 - 17820033
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggt 355  Q
    ||||||||||||||||||| |  |||||| |||||||| | |  |||| |||||||||||||||||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggt 17820033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 30915461 - 30915528
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||||||||||| |||||||| |||  || | |||| ||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgaca 30915528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 36168835 - 36168906
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||||||| |||||| ||||||||||  ||| ||| | ||||||||||| ||||| ||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtgg 36168906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 5574589 - 5574523
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| ||||||||||||||| |||||||| |||||||| |||  |||| |||| ||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgaca 5574523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 27864704 - 27864769
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||| ||| |||||||| |||  |||  |||||||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgaca 27864769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 45097837 - 45097765
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| ||| ||||||||| ||||||| | |||| |||| || |||||||||||||||||||    
T  45097837 aagagttatgatacataaacatccttaggtggcaatacatcccttg-acacccatacaaaaatctgacatgtgg 45097765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 38882915 - 38882849
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||||||||||| ||||| || |||  |||  |||||||||||||||||    
T  38882915 aagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgaca 38882849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 41575142 - 41575209
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||||||||| |||||| ||  ||||||| |||  ||| |||||||||||| ||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtc 41575209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 2533123 - 2533188
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||||||||||| ||||| ||| |||||||  |||  |||| |||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacac-cacacaaaaatctgaca 2533188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 42257191 - 42257263
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||||||| | ||||||| ||||||| || ||| |||| |||| |||||||||||| ||||    
T  42257191 aagagttatgatacatagacatctttaggtggcaatacatcatttg-acacccacataaaaatctgacacgtgg 42257263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 354
Target Start/End: Complemental strand, 2997569 - 2997517
Alignment:
Q  302 acccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 2997517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 21234401 - 21234466
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||| |||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgaca 21234466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 7389386 - 7389454
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  7389386 taagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgaca 7389454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 38837215 - 38837282
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||||||||||| |||||||| |||| ||||  ||||||||||||||||    
T  38837215 aagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgaca 38837282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 22343360 - 22343430
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtg 353  Q
    |||||||||||||||| ||||||||||||| |||||||| | |  |||| |||||||||||||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtg 22343430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 46374902 - 46374832
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||||| ||||||||| ||| |||| ||| ||||| ||||||||||||||||| ||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtgg 46374832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 38267040 - 38267105
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||| |||||||||||| |||  |||| |||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgaca 38267105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 19436289 - 19436222
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||| ||||||||||||||||||  ||  |||| |||||||||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgaca 19436222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 356
Target Start/End: Original strand, 36208170 - 36208245
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||||||||||||||||||||  ||||||  | |  |||| |||||||||| |||||||||||||    
T  36208170 taagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtc 36208245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 354
Target Start/End: Original strand, 41915740 - 41915811
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||| ||||||||||||| |||||||| | |  ||||  |||||||||||||||||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtgg 41915811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 36362014 - 36361948
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| |||||||||||||||||||||||| |||||||  |||  |||| |||||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgaca 36361948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 38044195 - 38044265
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    ||||||||||||||||| ||||||||||||| |||||||| | |  |||  ||||||||||||||||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgt 38044265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 8238212 - 8238281
Alignment:
Q  284 gagttatgatacatagacaccct-taggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    ||||||||||||||| ||||||| |||||| |||||||| |||  |||| ||||||||||||||||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgt 8238281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 354
Target Start/End: Original strand, 35522877 - 35522946
Alignment:
Q  285 agttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||||| ||||| ||| ||||||||  || ||||| ||||||||||||||||| ||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtgg 35522946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 46033902 - 46033829
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||||||||||||| |  |||||||| |||||||| ||| ||||| |||| |||||||||||| ||||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtc 46033829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 3694372 - 3694432
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| ||| ||||||||||||||||||||||  || ||||| |||||||||||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgaca 3694432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 10343665 - 10343598
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacaca-cttgaacactcacacaaaaatctgaca 349  Q
    |||||| ||||||||||||||||||||||||  |||||||| ||||| ||| |||||||||||||||||    
T  10343665 aagagtaatgatacatagacacccttaggtggaaatacacatcttga-cacccacacaaaaatctgaca 10343598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 26296643 - 26296707
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctga 347  Q
    |||||||||||||||||||| ||||||||||||||| || ||| ||||  |||| ||||||||||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctga 26296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 31735884 - 31735940
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaa 340  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| ||||| ||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 7727904 - 7727978
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||||| |||||||||||||  |||||| | |||| ||| ||||| |||||||||||||||||||    
T  7727904 aagagttatgatacataaacacccttaggtggtaatacacctcttg-acattcacataaaaatctgacatgtggtc 7727978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 8080485 - 8080418
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||||||||||| |||||||| |||  ||||  ||| ||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgaca 8080418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 40957705 - 40957772
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| ||||||||||||||| |||||||| |||||||| |||  | || |||||||||||||||||    
T  40957705 aagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgaca 40957772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 3434561 - 3434627
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| |||||||||||||| ||||||||| |||||||| |||  |||| |||||||||| ||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgaca 3434627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 32564526 - 32564456
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||| |||  |||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 32564456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 36362025 - 36362091
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| ||||||||||||||||||||||||  ||||||  |||  |||| |||||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgaca 36362091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 19329842 - 19329907
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||| ||||||||| ||||||||  ||  |||| |||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 19329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 35137533 - 35137594
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatct 345  Q
    |||| |||||| ||||||||||||||||| |||||||| |||  |||| |||||||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatct 35137594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 3784000 - 3784060
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||||||||||||||| |||||||   ||  |||| |||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgaca 3784060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 4999614 - 4999551
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctga 347  Q
    |||| ||||||||||||||||||||| || ||||||||  ||  |||| |||||||||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctga 4999551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 18207178 - 18207217
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacac 321  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  18207178 aagagttatgatacatagacaaccttaggtggcaatacac 18207217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 39256023 - 39255953
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||| | || || |||||||||||||| ||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttg-atacccatacaaaaatctgacacgtgg 39255953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Original strand, 11044186 - 11044224
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaataca 320  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  11044186 aagagtaatgatacatagacacccttaggtggcaataca 11044224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 312
Target Start/End: Original strand, 12310905 - 12310934
Alignment:
Q  283 agagttatgatacatagacacccttaggtg 312  Q
    ||||||||||||||||||||||||||||||    
T  12310905 agagttatgatacatagacacccttaggtg 12310934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 41423682 - 41423754
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacaca-cttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||||||| | |||| ||  |||||||  ||||| |||| |||||||||||||||||||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttga-cacttacacaaaaatctgacatgtggtc 41423754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 32951588 - 32951532
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatct 345  Q
    ||||||||||||||| ||||| ||||||||||  ||| ||||  |||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatct 32951532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 40846213 - 40846145
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgt 352  Q
    ||||||||||||||| ||| ||||||||| |||||||| | |  |||  ||||||||||||| ||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgt 40846145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 281 - 354
Target Start/End: Complemental strand, 15990145 - 15990072
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||||| ||||||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  15990145 taagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 15990072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 283 - 356
Target Start/End: Original strand, 31976247 - 31976320
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||||||||||||||| ||||||||| ||||| || ||| ||||| ||||||||||||||||| ||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtc 31976320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 30341462 - 30341390
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| ||||||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  30341462 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 30341390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 15508124 - 15508054
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||| ||||||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 15508054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 346
Target Start/End: Complemental strand, 6209567 - 6209503
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctg 346  Q
    |||||| |||||||||||||||||||||||| ||||||||  ||  |||||||||||||||||||    
T  6209567 aagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctg 6209503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 291 - 349
Target Start/End: Original strand, 32869685 - 32869743
Alignment:
Q  291 gatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 32869743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 22880753 - 22880693
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||||||||||||||| |||||||| |||  |||| ||||||||| |||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgaca 22880693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 31110861 - 31110796
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||  |||||  |||||||||||||||    
T  31110861 aagagttatgatacatagacatccttaggtggcaatacaccctttgacact--cacaaaaatctgaca 31110796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 17598554 - 17598619
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| |||||||   ||  |||| |||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgaca 17598619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 29857827 - 29857892
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||| |||| || ||||||||  || ||||| |||||||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgaca 29857892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 11427615 - 11427683
Alignment:
Q  283 agagttatgatacatagacaccct--taggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| ||||||||||||||||||  |||||| |||||||  |||  |||| |||||||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgaca 11427683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 31109488 - 31109435
Alignment:
Q  296 atagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||| |||||||| |||  |||  |||||||||||||||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgaca 31109435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 353
Target Start/End: Complemental strand, 31953130 - 31953061
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtg 353  Q
    |||| |||||| ||||||| ||||||||| |||||||| | |  |||| |||| ||||||||||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtg 31953061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 318
Target Start/End: Original strand, 15832575 - 15832611
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaata 318  Q
    |||||| |||||||||||||||| |||||||||||||    
T  15832575 aagagtaatgatacatagacacctttaggtgacaata 15832611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 280 - 349
Target Start/End: Complemental strand, 15409714 - 15409645
Alignment:
Q  280 gtaagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||  |||| |||||||||||||||||    
T  15409714 gtaagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgaca 15409645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 3921367 - 3921295
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||| ||||||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  3921367 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 3921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 28177775 - 28177847
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    ||||||||||||||||||| ||||||||| |||||||| |||  |||| ||||||||||||||||| ||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtc 28177847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 40145407 - 40145472
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| |||||||| ||| ||||  |||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgaca 40145472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 18520979 - 18520919
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 18520919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 354
Target Start/End: Complemental strand, 2252269 - 2252198
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    |||||||||||||||| ||| ||||||||| |||||||| | |  |||| ||||||||||||||||||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 2252198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 31008986 - 31009053
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||| ||| |||||||||||||||||  |||  |||| |||||||||||||||||    
T  31008986 aagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgaca 31009053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 36733044 - 36732977
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||||| |||||||||||||||||||||||  |||||||| |||  |||| |||||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgaca 36732977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 2740273 - 2740339
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||| |||||||||||||| ||||||||| |||||||| |||  |||| |||||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 2740339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 26720516 - 26720586
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| |||||  ||| |||||||||||| ||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtgg 26720586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 26990265 - 26990335
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtgg 354  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| |||||  ||| |||||||||||| ||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtgg 26990335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 35943992 - 35943927
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||||||||||||| ||||||| || ||| |||| |||||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttg-acacccacacaaaaatctgaca 35943927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 356
Target Start/End: Original strand, 6679697 - 6679770
Alignment:
Q  283 agagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||||||||||||||| | ||||||| ||||||||  ||  |||| ||||||||||||||||| ||||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtc 6679770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 35785199 - 35785264
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||||||||||| ||||||||  ||  |||| |||||||||||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 35785264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 39689000 - 39688925
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||||||||||||| ||||||||| ||| ||||||| | |||| |||| ||||||||||||||| ||||||||    
T  39689000 taagagttatgatacataaacacccttaagtggcaatacatcccttg-acacccacacaaaaatctgatatgtggtc 39688925  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 36875698 - 36875644
Alignment:
Q  289 atgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaat 343  Q
    |||||||||||||||||||||||| |||||||| |||  |||| |||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

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Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 14831814 - 14831879
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||| |||||||| |||||||| |||  |||| |||| ||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgaca 14831879  T

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Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 33149738 - 33149673
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||||||||||||  ||||||| |||  |||| ||||||||||| |||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgaca 33149673  T

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Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 42414402 - 42414337
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| ||||||||||||||||  |||||| |||||||| |||  |||| |||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgaca 42414337  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 13811650 - 13811717
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaataca-cacttgaacactcacacaaaaatctgaca 349  Q
    |||||| | |||||||||||||||||||||| ||||||| || ||| |||| |||||||||||||||||    
T  13811650 aagagtaaagatacatagacacccttaggtggcaatacatcatttg-acacccacacaaaaatctgaca 13811717  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 6260101 - 6260040
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatct 345  Q
    |||| |||||||||| ||| || ||||||||||||||| ||| ||||| ||| |||||||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatct 6260040  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 9603810 - 9603878
Alignment:
Q  281 taagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||| |||||||||| ||| |||||||||| ||||||| | |  ||||  ||||||||||||||||    
T  9603810 taagagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgaca 9603878  T

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Target: scaffold0237 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 4029 - 4094
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||||| |||| || ||||||||  || ||||| |||||||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgaca 4094  T

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Target: scaffold0321 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 10211 - 10144
Alignment:
Q  282 aagagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    ||||||||||||||||||||||| ||||||| |||||||  |||  |||  |||| ||||||||||||    
T  10211 aagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgaca 10144  T

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Target: scaffold1268 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 1029 - 964
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||| | ||||||| |||||||| ||| ||||  |||||||||| ||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgaca 964  T

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Target: scaffold1267 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 1029 - 964
Alignment:
Q  284 gagttatgatacatagacacccttaggtgacaatacacacttgaacactcacacaaaaatctgaca 349  Q
    |||| |||||||||||||| | ||||||| |||||||| ||| ||||  |||||||||| ||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgaca 964  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 152514 - 152570
Alignment:
Q  300 acacccttaggtgacaatacacacttgaacactcacacaaaaatctgacatgtggtc 356  Q
    |||||||| |||| |||||||| | |  |||| ||||||||||||||||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtc 152570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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