View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11887_high_24 (Length: 242)
Name: NF11887_high_24
Description: NF11887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11887_high_24 |
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Alignment Details
Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 18987268 - 18987209
Alignment:
| Q |
156 |
ggtacaccaccttttattgcttttgataacaacccttttatttctattctttattttatg |
215 |
Q |
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| T |
18987268 |
ggtacaccatcttttattgcttttgataacaaccctttcatttttattctttattatatg |
18987209 |
T |
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