View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11888_high_37 (Length: 250)
Name: NF11888_high_37
Description: NF11888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11888_high_37 |
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Alignment Details
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 9588882 - 9588643
Alignment:
| Q |
1 |
tctaatgattcgaaggtcgtaattggttgataatgtaaaatattttacactaactgtatatgaattgaattctaaaattgtctcgacac--atgacaatt |
98 |
Q |
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| T |
9588882 |
tctaatgattcgaaggtagtaattggttgacaatgtaaaatattttacactcactatatatgaattgaattctaaaattgtctcgacacatatgacaatt |
9588783 |
T |
|
| Q |
99 |
tttaaacaaaagacactagaatgagttttttatatgaaaaatgttatttgattataaccatttttgagcaatatatggaatagctaaagatatataagac |
198 |
Q |
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| T |
9588782 |
tttaaacaaaaaacactagaatgagttttttatatgaaaaatgttatttgat--taaccatttttgagcaatgtatggaatagctaaagatatataagac |
9588685 |
T |
|
| Q |
199 |
aatataatttttaatcattttttacttgttttgatttctctg |
240 |
Q |
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| T |
9588684 |
aatataatttttaatcatgttttacttgttttaatttttctg |
9588643 |
T |
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