View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11890_high_14 (Length: 279)

Name: NF11890_high_14
Description: NF11890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11890_high_14
NF11890_high_14
[»] chr4 (44 HSPs)
chr4 (21-159)||(47426466-47426609)
chr4 (60-106)||(8321972-8322018)
chr4 (61-106)||(40435628-40435673)
chr4 (59-106)||(31938171-31938218)
chr4 (60-106)||(7258691-7258737)
chr4 (60-106)||(18405535-18405581)
chr4 (60-106)||(23686514-23686560)
chr4 (60-106)||(39730595-39730641)
chr4 (60-106)||(43722991-43723037)
chr4 (60-106)||(45595995-45596041)
chr4 (61-106)||(27763201-27763246)
chr4 (61-106)||(41744523-41744568)
chr4 (62-106)||(18931482-18931526)
chr4 (59-106)||(30790274-30790321)
chr4 (60-106)||(935853-935899)
chr4 (60-106)||(6280223-6280269)
chr4 (60-106)||(13230291-13230337)
chr4 (60-106)||(36860058-36860104)
chr4 (60-106)||(39835609-39835655)
chr4 (60-106)||(41859348-41859394)
chr4 (60-106)||(45748097-45748143)
chr4 (60-106)||(47670089-47670135)
chr4 (60-106)||(48873748-48873794)
chr4 (60-106)||(48879052-48879098)
chr4 (60-106)||(51968506-51968552)
chr4 (60-106)||(55968302-55968348)
chr4 (61-106)||(27942465-27942510)
chr4 (113-159)||(31938101-31938149)
chr4 (107-159)||(25932230-25932284)
chr4 (67-106)||(34238256-34238295)
chr4 (107-159)||(39730525-39730579)
chr4 (107-159)||(39835539-39835593)
chr4 (107-159)||(40435689-40435743)
chr4 (107-159)||(48519123-48519177)
chr4 (67-106)||(50673206-50673245)
chr4 (63-106)||(52469427-52469470)
chr4 (60-106)||(18405130-18405176)
chr4 (60-106)||(25932168-25932214)
chr4 (60-106)||(27555154-27555200)
chr4 (60-106)||(35999413-35999459)
chr4 (59-93)||(38394633-38394667)
chr4 (64-106)||(38413907-38413949)
chr4 (61-106)||(18094012-18094057)
chr4 (66-106)||(48519193-48519233)
[»] chr7 (38 HSPs)
chr7 (60-159)||(40212627-40212728)
chr7 (60-106)||(48313845-48313891)
chr7 (61-106)||(27419526-27419571)
chr7 (60-106)||(9947293-9947339)
chr7 (60-106)||(44565768-44565814)
chr7 (64-106)||(44819981-44820023)
chr7 (60-106)||(45265350-45265396)
chr7 (66-106)||(22156480-22156520)
chr7 (66-106)||(22212395-22212435)
chr7 (58-106)||(35488491-35488539)
chr7 (59-106)||(27214157-27214204)
chr7 (63-106)||(30686293-30686336)
chr7 (63-106)||(37534404-37534447)
chr7 (60-106)||(11329716-11329762)
chr7 (60-106)||(16916187-16916233)
chr7 (60-106)||(28904488-28904534)
chr7 (60-106)||(33378557-33378603)
chr7 (60-102)||(38396671-38396713)
chr7 (60-106)||(45722882-45722928)
chr7 (60-106)||(48341087-48341133)
chr7 (61-106)||(34930769-34930814)
chr7 (58-103)||(45045347-45045392)
chr7 (60-92)||(31922042-31922074)
chr7 (58-106)||(45448663-45448711)
chr7 (107-159)||(18823947-18824001)
chr7 (63-106)||(27248019-27248062)
chr7 (63-106)||(31598449-31598492)
chr7 (107-159)||(37534334-37534388)
chr7 (60-106)||(17276461-17276507)
chr7 (125-159)||(30686223-30686257)
chr7 (60-106)||(43948968-43949014)
chr7 (60-106)||(48160875-48160921)
chr7 (65-106)||(18823890-18823931)
chr7 (65-106)||(39553910-39553951)
chr7 (59-103)||(6656776-6656820)
chr7 (127-159)||(28904418-28904450)
chr7 (60-92)||(41632675-41632707)
chr7 (63-159)||(47246295-47246393)
[»] chr8 (37 HSPs)
chr8 (60-106)||(16313809-16313855)
chr8 (62-106)||(5020793-5020837)
chr8 (60-106)||(25837634-25837680)
chr8 (60-106)||(31117828-31117874)
chr8 (61-106)||(18297836-18297881)
chr8 (61-106)||(37982089-37982134)
chr8 (58-106)||(38363802-38363850)
chr8 (62-106)||(41432464-41432508)
chr8 (60-106)||(3049732-3049778)
chr8 (60-106)||(7930962-7931008)
chr8 (60-106)||(25899382-25899428)
chr8 (60-106)||(35394081-35394127)
chr8 (60-106)||(38133040-38133086)
chr8 (61-106)||(18726922-18726967)
chr8 (60-105)||(34672084-34672129)
chr8 (62-106)||(42755592-42755636)
chr8 (107-159)||(7317162-7317216)
chr8 (60-106)||(12710368-12710414)
chr8 (60-106)||(35818726-35818772)
chr8 (60-106)||(37392848-37392894)
chr8 (60-106)||(43872267-43872313)
chr8 (61-106)||(19161043-19161088)
chr8 (61-105)||(12649859-12649903)
chr8 (107-159)||(26061929-26061983)
chr8 (107-159)||(35394176-35394230)
chr8 (125-159)||(5020723-5020757)
chr8 (64-106)||(10896518-10896560)
chr8 (60-106)||(26061867-26061913)
chr8 (60-106)||(26602239-26602285)
chr8 (60-106)||(32661236-32661282)
chr8 (60-102)||(33533698-33533740)
chr8 (58-92)||(41228985-41229019)
chr8 (126-159)||(6805854-6805887)
chr8 (60-104)||(15226689-15226733)
chr8 (107-160)||(15226751-15226806)
chr8 (60-104)||(16219245-16219289)
chr8 (127-159)||(40197285-40197317)
[»] chr2 (43 HSPs)
chr2 (60-106)||(2050589-2050635)
chr2 (59-106)||(5770412-5770459)
chr2 (60-106)||(14777800-14777846)
chr2 (60-106)||(37192245-37192291)
chr2 (60-106)||(40569741-40569787)
chr2 (60-106)||(41729432-41729478)
chr2 (65-106)||(13790018-13790059)
chr2 (61-106)||(17965707-17965752)
chr2 (62-106)||(3902182-3902226)
chr2 (63-106)||(3254394-3254437)
chr2 (63-106)||(21737710-21737753)
chr2 (107-159)||(28311928-28311982)
chr2 (107-159)||(37233215-37233269)
chr2 (63-106)||(45693915-45693958)
chr2 (60-106)||(346647-346693)
chr2 (60-106)||(4559282-4559328)
chr2 (60-106)||(6171514-6171560)
chr2 (60-106)||(7007308-7007354)
chr2 (60-106)||(11071328-11071374)
chr2 (60-106)||(23943886-23943932)
chr2 (60-106)||(37533676-37533722)
chr2 (60-106)||(42674963-42675009)
chr2 (60-105)||(14403509-14403554)
chr2 (62-106)||(13760692-13760736)
chr2 (58-106)||(20426784-20426832)
chr2 (66-106)||(25625054-25625094)
chr2 (62-106)||(28311998-28312042)
chr2 (62-106)||(37233155-37233199)
chr2 (107-159)||(11071390-11071444)
chr2 (67-106)||(41298216-41298255)
chr2 (64-106)||(9734148-9734190)
chr2 (60-106)||(18713958-18714004)
chr2 (60-106)||(25444923-25444969)
chr2 (61-106)||(5003137-5003182)
chr2 (65-106)||(14253254-14253295)
chr2 (126-159)||(14253360-14253393)
chr2 (61-106)||(37851617-37851662)
chr2 (61-106)||(39819414-39819459)
chr2 (218-254)||(2521575-2521611)
chr2 (67-103)||(4875506-4875542)
chr2 (62-106)||(14832536-14832580)
chr2 (66-106)||(36590875-36590915)
chr2 (127-159)||(41750336-41750368)
[»] chr1 (48 HSPs)
chr1 (61-106)||(32202615-32202660)
chr1 (58-106)||(25789485-25789533)
chr1 (61-106)||(1597644-1597689)
chr1 (58-106)||(3939223-3939271)
chr1 (62-106)||(48916324-48916368)
chr1 (60-103)||(9011467-9011510)
chr1 (60-106)||(8331738-8331784)
chr1 (60-106)||(25473979-25474025)
chr1 (60-106)||(29091396-29091442)
chr1 (60-106)||(52630497-52630543)
chr1 (62-106)||(9832172-9832216)
chr1 (62-106)||(13932174-13932218)
chr1 (58-106)||(20260388-20260436)
chr1 (58-106)||(39930179-39930227)
chr1 (63-106)||(37261546-37261589)
chr1 (58-92)||(1007537-1007571)
chr1 (60-106)||(5806578-5806624)
chr1 (60-106)||(6911209-6911255)
chr1 (60-106)||(9115561-9115607)
chr1 (60-106)||(12190479-12190525)
chr1 (60-106)||(14788447-14788493)
chr1 (60-106)||(36361507-36361553)
chr1 (60-106)||(46666432-46666478)
chr1 (60-106)||(46960352-46960398)
chr1 (60-106)||(47031583-47031629)
chr1 (64-106)||(49824025-49824067)
chr1 (60-106)||(50191066-50191112)
chr1 (61-106)||(19923765-19923810)
chr1 (61-106)||(37436921-37436966)
chr1 (61-106)||(39329347-39329392)
chr1 (63-103)||(11014842-11014882)
chr1 (62-106)||(48462258-48462302)
chr1 (107-159)||(1597574-1597628)
chr1 (63-106)||(4683675-4683718)
chr1 (107-159)||(5518735-5518789)
chr1 (63-106)||(47845433-47845476)
chr1 (63-106)||(49627301-49627344)
chr1 (63-106)||(51445381-51445424)
chr1 (60-106)||(2632577-2632623)
chr1 (112-159)||(2632644-2632693)
chr1 (60-106)||(17475611-17475657)
chr1 (60-106)||(24116636-24116682)
chr1 (60-106)||(38964981-38965027)
chr1 (58-103)||(47677366-47677411)
chr1 (61-106)||(52186299-52186344)
chr1 (90-159)||(4683605-4683676)
chr1 (66-106)||(13653581-13653621)
chr1 (60-92)||(45771816-45771848)
[»] chr5 (26 HSPs)
chr5 (60-106)||(8406617-8406663)
chr5 (60-106)||(12970832-12970878)
chr5 (60-106)||(26637323-26637369)
chr5 (60-106)||(28602279-28602325)
chr5 (60-106)||(32535660-32535706)
chr5 (62-106)||(42012486-42012530)
chr5 (63-106)||(36978435-36978478)
chr5 (60-106)||(4765862-4765908)
chr5 (60-106)||(6091438-6091484)
chr5 (60-106)||(18411932-18411978)
chr5 (60-106)||(22936214-22936260)
chr5 (60-106)||(28429451-28429497)
chr5 (60-106)||(29543317-29543363)
chr5 (61-106)||(556008-556053)
chr5 (62-106)||(11855957-11856001)
chr5 (58-106)||(19065807-19065855)
chr5 (62-106)||(27481082-27481126)
chr5 (107-159)||(11855887-11855941)
chr5 (63-106)||(20962286-20962329)
chr5 (60-106)||(6930365-6930411)
chr5 (60-106)||(14207123-14207169)
chr5 (61-103)||(27480735-27480777)
chr5 (60-106)||(43347196-43347242)
chr5 (61-106)||(36703506-36703551)
chr5 (60-88)||(7441579-7441607)
chr5 (127-159)||(14207053-14207085)
[»] chr3 (42 HSPs)
chr3 (60-106)||(27822994-27823040)
chr3 (60-159)||(10822949-10823065)
chr3 (60-106)||(6231803-6231849)
chr3 (60-106)||(8476610-8476656)
chr3 (60-106)||(44952031-44952077)
chr3 (60-106)||(46359675-46359721)
chr3 (61-106)||(1098923-1098968)
chr3 (62-106)||(43719227-43719271)
chr3 (107-159)||(43132388-43132442)
chr3 (60-106)||(9320751-9320797)
chr3 (60-106)||(11239422-11239468)
chr3 (60-106)||(20297516-20297562)
chr3 (60-106)||(24574290-24574336)
chr3 (60-106)||(26848745-26848791)
chr3 (61-103)||(26849450-26849492)
chr3 (60-106)||(33218215-33218261)
chr3 (60-106)||(40907989-40908035)
chr3 (60-106)||(48340059-48340105)
chr3 (60-106)||(53166026-53166072)
chr3 (61-106)||(12228556-12228601)
chr3 (61-106)||(20414767-20414812)
chr3 (65-106)||(28124738-28124779)
chr3 (61-106)||(31267649-31267694)
chr3 (65-106)||(33650316-33650357)
chr3 (66-106)||(18460582-18460622)
chr3 (62-106)||(43132458-43132502)
chr3 (63-106)||(6927817-6927860)
chr3 (64-99)||(13642826-13642861)
chr3 (107-159)||(26848807-26848861)
chr3 (59-106)||(28770511-28770558)
chr3 (63-106)||(31611287-31611330)
chr3 (107-159)||(33218145-33218199)
chr3 (107-159)||(44952093-44952147)
chr3 (63-106)||(47115159-47115202)
chr3 (125-159)||(19532950-19532984)
chr3 (61-106)||(29512324-29512369)
chr3 (60-92)||(19532912-19532944)
chr3 (65-97)||(21925832-21925864)
chr3 (62-106)||(24783934-24783978)
chr3 (66-106)||(38140670-38140710)
chr3 (107-160)||(49216085-49216140)
chr3 (114-159)||(53165956-53166003)
[»] chr6 (13 HSPs)
chr6 (61-106)||(16968649-16968694)
chr6 (60-106)||(2657423-2657469)
chr6 (60-106)||(7053880-7053926)
chr6 (60-106)||(18897644-18897690)
chr6 (62-106)||(14170740-14170784)
chr6 (60-106)||(1316742-1316788)
chr6 (60-106)||(8029026-8029072)
chr6 (60-106)||(10246418-10246464)
chr6 (61-106)||(9762342-9762387)
chr6 (65-106)||(21008281-21008322)
chr6 (107-159)||(2657485-2657539)
chr6 (60-106)||(6706054-6706100)
chr6 (61-106)||(11570086-11570131)
[»] scaffold0006 (2 HSPs)
scaffold0006 (60-106)||(201649-201695)
scaffold0006 (66-106)||(143342-143382)


Alignment Details
Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 47426609 - 47426466
Alignment:
Q  21 gtgtggcgataaatggaatatatatgtgacnnnnnnnat---gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacatgatgtgaattt 117  Q
    ||||||||||||||||||||||||||||||        |   ||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  47426609 gtgtggcgataaatggaatatatatgtgactttttcttttaggggtgtgattgtttcaagtttaccaaatttatttttaggaataacatgatgggaattt 47426510  T
Q  118 tattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    ||||| |  |||||||| |||||||| |||||| ||||||||||    
T  47426509 tattcaaaggtatttagaaaaaatatatttggttaactttataa 47426466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 8321972 - 8322018
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  8321972 gggtgtgtttgtttcaagtttaccaaatttatttttaggaataacat 8322018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 40435628 - 40435673
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  40435628 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacat 40435673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 31938218 - 31938171
Alignment:
Q  59 tgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  31938218 tgggtgtgtttgtttcaagtttatcaaatttattcataggaataacat 31938171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 7258691 - 7258737
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  7258691 gggtgtgtttgtttcaagtttatcaaatttattctcaggaataacat 7258737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 18405581 - 18405535
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  18405581 gggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 18405535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 23686514 - 23686560
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  23686514 gggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 23686560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 39730641 - 39730595
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  39730641 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 39730595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 43722991 - 43723037
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  43722991 gggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 43723037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 45595995 - 45596041
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  45595995 gggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 45596041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 27763246 - 27763201
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||    
T  27763246 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 27763201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 41744568 - 41744523
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  41744568 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 41744523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 18931482 - 18931526
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||| |||||||||||||||||| |||||||||||||    
T  18931482 gtgtgtttgttttaagtttatcaaatttattcttaggaataacat 18931526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 30790274 - 30790321
Alignment:
Q  59 tgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  30790274 tgggtgtgtttgtttcaagtttagcaaatttatttctaggagtaacat 30790321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 935853 - 935899
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||||    
T  935853 gggtgtgtttgtttcaagtttaccaaatttattcttaagaataacat 935899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 6280269 - 6280223
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  6280269 gggtgtgtttgtttcaagtttaccaaatttattcataggaataacat 6280223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 13230337 - 13230291
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  13230337 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 13230291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 36860104 - 36860058
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  36860104 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 36860058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 39835655 - 39835609
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||    
T  39835655 gggtgtgtttgtttcaagtttaccaaatttatttctatgaataacat 39835609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 41859394 - 41859348
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  41859394 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 41859348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 45748143 - 45748097
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  45748143 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 45748097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 47670089 - 47670135
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  47670089 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 47670135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 48873748 - 48873794
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  48873748 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 48873794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 48879052 - 48879098
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  48879052 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 48879098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 51968506 - 51968552
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  51968506 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 51968552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 55968348 - 55968302
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  55968348 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 55968302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 27942465 - 27942510
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  27942465 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 27942510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 31938149 - 31938101
Alignment:
Q  113 aattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  31938149 aattttattccaaggtatttaggaaaaatatgtttggttaactttataa 31938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 25932230 - 25932284
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  25932230 gatgggaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 25932284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 34238295 - 34238256
Alignment:
Q  67 tttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  34238295 tttgtttcaagtttatcaaatttattcataggaataacat 34238256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 39730579 - 39730525
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  39730579 gatgagaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 39730525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 39835593 - 39835539
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  39835593 gatgggaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 39835539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 40435689 - 40435743
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  40435689 gatgggaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 40435743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 48519177 - 48519123
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    ||||||||||||||||||  | |||||||||||||||||||||| | ||||||||    
T  48519177 gatgtgaattttattccaaggaatttaggaaaaatatgtttggttagctttataa 48519123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 50673245 - 50673206
Alignment:
Q  67 tttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  50673245 tttgtttcaagtttatcaaatttattcctaggaataacat 50673206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 52469427 - 52469470
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||    
T  52469427 tgtgtttgttttaagttaatcaaatttattcttaggaataacat 52469470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 18405130 - 18405176
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||| ||||||  |||||||||| |||||||||||||    
T  18405130 gggtgtgtttgttttaagtttgccaaatttattcttaggaataacat 18405176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 25932168 - 25932214
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||  ||||||||||  ||||||||||||    
T  25932168 gggtgtgtttgtttcaagtttcccaaatttattcctaggaataacat 25932214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 27555154 - 27555200
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||  |||||||||  ||||||||||||    
T  27555154 gggtgtgtttgtttcaagtttactaaatttattcctaggaataacat 27555200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 35999413 - 35999459
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||| ||||||||||||||||| |||||||||| ||| |||||||||    
T  35999413 gggtttgtttgtttcaagtttaccaaatttattcttaagaataacat 35999459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 38394633 - 38394667
Alignment:
Q  59 tgggtgtgtttgtttcaagtttatcaaatttattt 93  Q
    ||||||||||||||||||||||| |||||||||||    
T  38394633 tgggtgtgtttgtttcaagtttaccaaatttattt 38394667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 38413907 - 38413949
Alignment:
Q  64 gtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||| |||||||| |||||| ||||||||    
T  38413907 gtgtttgtttcaagtttaccaaatttaattttagaaataacat 38413949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 18094012 - 18094057
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||| || |||||||||| |||||| |||||||||||    
T  18094012 ggtgtgtttgttttaaatttatcaaatctattttcaggaataacat 18094057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 48519233 - 48519193
Alignment:
Q  66 gtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||| ||||||||||  ||||||||||||    
T  48519233 gtttgtttcaagtttaccaaatttattcctaggaataacat 48519193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 40212627 - 40212728
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacatgatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttat 157  Q
    |||||||||||||||||||||| ||||||||||  ||||||||  | |||| |||||||||||||  | |||||||||||||||||||||| | ||||||    
T  40212627 gggtgtgtttgtttcaagtttaccaaatttattcctaggaatataaagatgagaattttattccaaggaatttaggaaaaatatgtttggttagctttat 40212726  T
Q  158 aa 159  Q
    ||    
T  40212727 aa 40212728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 48313845 - 48313891
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  48313845 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacat 48313891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 27419571 - 27419526
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27419571 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacat 27419526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 9947339 - 9947293
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  9947339 gggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 9947293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 44565768 - 44565814
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  44565768 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 44565814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 44819981 - 44820023
Alignment:
Q  64 gtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  44819981 gtgtttgtttcaagtttaccaaatttatttttaggaataacat 44820023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 45265396 - 45265350
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  45265396 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 45265350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 22156520 - 22156480
Alignment:
Q  66 gtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  22156520 gtttgtttcaaatttatcaaatttatttttaggaataacat 22156480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 22212435 - 22212395
Alignment:
Q  66 gtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  22212435 gtttgtttcaaatttatcaaatttatttttaggaataacat 22212395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 35488539 - 35488491
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  35488539 atgggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 35488491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 27214204 - 27214157
Alignment:
Q  59 tgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  27214204 tgggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 27214157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 30686336 - 30686293
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||    
T  30686336 tgtgtttgttttaagtttatcaaatttatttctaggaataacat 30686293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 37534447 - 37534404
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  37534447 tgtgtttgtttcaagtttatcaaatttatttctagaaataacat 37534404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 11329716 - 11329762
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  11329716 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 11329762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 16916233 - 16916187
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  16916233 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 16916187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 28904534 - 28904488
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  28904534 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 28904488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 33378557 - 33378603
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  33378557 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 33378603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 38396713 - 38396671
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaata 102  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  38396713 gggtgtgtttgtttcaagtttatcaaatttattcctaggaata 38396671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 45722882 - 45722928
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  45722882 gggtgtctttatttcaagtttaccaaatttatttttaggaataacat 45722928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 48341087 - 48341133
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  48341087 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 48341133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 34930814 - 34930769
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  34930814 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 34930769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 45045347 - 45045392
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataa 103  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||||    
T  45045347 atggatgtgtttgtttcaagtttaccaaatttattcttaggaataa 45045392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 31922074 - 31922042
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatt 92  Q
    |||||||||||||||||||||||||||||||||    
T  31922074 gggtgtgtttgtttcaagtttatcaaatttatt 31922042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 45448663 - 45448711
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||| ||||||||||  || |||||||||    
T  45448663 atgggtgtgtttgtttcaagtttaccaaatttattcctatgaataacat 45448711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 18823947 - 18824001
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| ||||||||||| |  |||||||||||||||||||||||| ||||||||||    
T  18823947 gatgagaattttattctaaggtatttaggaaaaatatgtttggttaactttataa 18824001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 27248019 - 27248062
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||    
T  27248019 tgtgtttgtttcaagtttaccaaatttattcctaggaataacat 27248062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 31598449 - 31598492
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  31598449 tgtgtttgttttaagtttaccaaatttatttttgggaataacat 31598492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 37534388 - 37534334
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||| ||  |||||||||||||||||||||||| ||||||||||    
T  37534388 gatgagaattttatttcaaggtatttaggaaaaatatgtttggttaactttataa 37534334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 17276507 - 17276461
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||| ||||  |||||||||| ||||||||||||    
T  17276507 gggtgtgtttgtttcaattttacaaaatttatttctaggaataacat 17276461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 30686257 - 30686223
Alignment:
Q  125 gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||||||||||||||||||||| ||||||||||    
T  30686257 gtatttaggaaaaatatgtttggttaactttataa 30686223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 43948968 - 43949014
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||| ||||||||||||||| ||||||||||  ||||||||||||    
T  43948968 gggtgtatttgtttcaagtttaccaaatttattcctaggaataacat 43949014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 48160921 - 48160875
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||  |||||||||  ||||||||||||    
T  48160921 gggtgtgtttgtttcaagtttactaaatttattcctaggaataacat 48160875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 18823890 - 18823931
Alignment:
Q  65 tgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||| ||||||||||  ||||||||||||    
T  18823890 tgtttgtttcaagtttaccaaatttattcctaggaataacat 18823931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 39553910 - 39553951
Alignment:
Q  65 tgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||| |||||||||||||||||| |||| ||||||||    
T  39553910 tgtttgtttgaagtttatcaaatttattcttagtaataacat 39553951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 6656820 - 6656776
Alignment:
Q  59 tgggtgtgtttgtttcaagtttatcaaatttatttttaggaataa 103  Q
    ||||||||||| |||||||||||  ||||||||| ||||||||||    
T  6656820 tgggtgtgtttctttcaagtttactaaatttattcttaggaataa 6656776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 28904450 - 28904418
Alignment:
Q  127 atttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||||||||||||||||||| ||||||||||    
T  28904450 atttaggaaaaatatgtttggttaactttataa 28904418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 41632707 - 41632675
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatt 92  Q
    |||||||||||||||||||||| ||||||||||    
T  41632707 gggtgtgtttgtttcaagtttaccaaatttatt 41632675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 47246393 - 47246295
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacatgatgtgaattttattc--cagtatttag-gaaaaatatgtttggtcaactttataa 159  Q
    ||||||||||| || ||||||||||||||| || ||||| | |  |||||||||||||||   |||||||||  ||||| ||||||||||||| ||||||    
T  47246393 tgtgtttgttttaaatttatcaaatttattctttggaat-ataaaatgtgaattttattcaaaagtatttagaaaaaaagatgtttggtcaacattataa 47246295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 7e-18; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 16313855 - 16313809
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16313855 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 16313809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 5020837 - 5020793
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  5020837 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 5020793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 25837634 - 25837680
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  25837634 gggtgtgtttgtttcaagtttaccaaatttatttttaggaataacat 25837680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 31117874 - 31117828
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  31117874 gggtgtgtttgtttcaagtttatcaaatttatatttaggaataacat 31117828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 18297836 - 18297881
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  18297836 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacat 18297881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 37982134 - 37982089
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  37982134 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacat 37982089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 38363802 - 38363850
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  38363802 atgggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 38363850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 41432464 - 41432508
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  41432464 gtgtgtttgttttaagtttatcaaatttatttttaggaataacat 41432508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 3049732 - 3049778
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  3049732 gggtgtgtttgtttcaagtttatcaaatttattcataggaataacat 3049778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 7930962 - 7931008
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  7930962 gggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 7931008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 25899382 - 25899428
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||    
T  25899382 gggtgtgtttgtttcaagtgtaacaaatttatttttaggaataacat 25899428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 35394081 - 35394127
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  35394081 gggtgtgtttgtttcaagtttatcaaatttattcttagtaataacat 35394127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 38133086 - 38133040
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  38133086 gggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 38133040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 18726967 - 18726922
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  18726967 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 18726922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 34672084 - 34672129
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataaca 105  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||    
T  34672084 gggtgtgtttgttttaagtttatcaaatttatttttagaaataaca 34672129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 42755592 - 42755636
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  42755592 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 42755636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 7317162 - 7317216
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||||||||||||| |  |||||||||||||||||||||||| ||||||||||    
T  7317162 gatgtgaattttattctaaggtatttaggaaaaatatgtttggttaactttataa 7317216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 12710368 - 12710414
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  12710368 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 12710414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 35818772 - 35818726
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  35818772 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 35818726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 37392894 - 37392848
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  37392894 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 37392848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 43872313 - 43872267
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||    
T  43872313 gggtgtgtttgtttcaagtttgccaaatttatttctaggaataacat 43872267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 19161088 - 19161043
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||| | | |||||||||    
T  19161088 ggtgtgtttgtttcaagtttatcaaatttattctcaagaataacat 19161043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 12649859 - 12649903
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataaca 105  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||    
T  12649859 ggtgtgtttgtttcaagtttaccaaatttatttctacgaataaca 12649903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 26061929 - 26061983
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  26061929 gatgagaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 26061983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 35394176 - 35394230
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  ||||||| |||||||||||||||| ||||||||||    
T  35394176 gatgagaattttattccaaggtatttaagaaaaatatgtttggttaactttataa 35394230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Complemental strand, 5020757 - 5020723
Alignment:
Q  125 gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||||||||||||||||||||| ||||||||||    
T  5020757 gtatttaggaaaaatatgtttggttaactttataa 5020723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 10896560 - 10896518
Alignment:
Q  64 gtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||| ||||||||||  ||||||||||||    
T  10896560 gtgtttgtttcaagtttaccaaatttattcctaggaataacat 10896518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 26061867 - 26061913
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||| ||||||| ||||||||||  ||||||||||||    
T  26061867 gggtgtgtttgttttaagtttaccaaatttattcctaggaataacat 26061913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 26602285 - 26602239
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||| ||||||||    
T  26602285 gggtgtgtttgtttcaagtttaccaaatttattgctagaaataacat 26602239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 32661282 - 32661236
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||  |||||||||  ||||||||||||    
T  32661282 gggtgtgtttgtttcaagtttactaaatttattcctaggaataacat 32661236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 33533740 - 33533698
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaata 102  Q
    ||||||||||||||||||||| |||||||||||  ||||||||    
T  33533740 gggtgtgtttgtttcaagtttgtcaaatttattcctaggaata 33533698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 41229019 - 41228985
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatt 92  Q
    |||||||||||||||||||||||| ||||||||||    
T  41229019 atgggtgtgtttgtttcaagtttaccaaatttatt 41228985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 6805887 - 6805854
Alignment:
Q  126 tatttaggaaaaatatgtttggtcaactttataa 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  6805887 tatttaggaaaaatatgtttggttaactttataa 6805854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 15226689 - 15226733
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataac 104  Q
    ||||| ||||||||||| |||| |||||||||| |||||||||||    
T  15226689 gggtgcgtttgtttcaattttaccaaatttattattaggaataac 15226733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 15226751 - 15226806
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataaa 160  Q
    |||| |||||||||| ||  |||||||| ||||||||||||||| |||||||||||    
T  15226751 gatgagaattttatttcaaggtatttagaaaaaatatgtttggttaactttataaa 15226806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 16219289 - 16219245
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataac 104  Q
    |||||||||||||| ||||||||| ||||||||  ||||||||||    
T  16219289 gggtgtgtttgttttaagtttatccaatttattcctaggaataac 16219245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 40197317 - 40197285
Alignment:
Q  127 atttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||||||||||||||||||| ||||||||||    
T  40197317 atttaggaaaaatatgtttggttaactttataa 40197285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 2050589 - 2050635
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2050589 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 2050635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 5770459 - 5770412
Alignment:
Q  59 tgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5770459 tgggtgtgtttgtttcaagtttatcaaatttatttctaggaataacat 5770412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 14777846 - 14777800
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  14777846 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 14777800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 37192245 - 37192291
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  37192245 gggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 37192291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 40569741 - 40569787
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  40569741 gggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 40569787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 41729478 - 41729432
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  41729478 gggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 41729432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 13790018 - 13790059
Alignment:
Q  65 tgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  13790018 tgtttgtttcaagtttatcaaatttatttgtaggaataacat 13790059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 17965707 - 17965752
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  17965707 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 17965752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 3902182 - 3902226
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  3902182 gtgtgtttgtttcaagtttaccatatttatttttaggaataacat 3902226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 3254437 - 3254394
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  3254437 tgtgtttgttttaagtttaccaaatttatttttaggaataacat 3254394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 21737753 - 21737710
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  21737753 tgtgtttgtttcaagtttaccaaatttattcttaggaataacat 21737710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 28311982 - 28311928
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  28311982 gatgggaattttattccaaggtatttaggaaaaatatgtttggttaactttataa 28311928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 37233215 - 37233269
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  37233215 gatgggaattttattccaaggtatttaggaaaaatatgtttggttaactttataa 37233269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 45693915 - 45693958
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||| |||||||||| |||||||||||||    
T  45693915 tgtgtttgtttcaagtttaccaaatttattcttaggaataacat 45693958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 346693 - 346647
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  346693 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 346647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 4559282 - 4559328
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||    
T  4559282 gggtgtgtttgtttcaagtttaccaaatttatttctaagaataacat 4559328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 6171514 - 6171560
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  6171514 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 6171560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 7007308 - 7007354
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||||    
T  7007308 gggtgtgtttgttttaagtttaccaaatttattattaggaataacat 7007354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 11071328 - 11071374
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  11071328 gggtgtgtttgtttcaagtttaccaaatttattcataggaataacat 11071374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 23943886 - 23943932
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  23943886 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 23943932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 37533676 - 37533722
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||    
T  37533676 gggtgtgtttgtttcaagtttactaaatttatttctaggaataacat 37533722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 42675009 - 42674963
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  42675009 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 42674963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 14403554 - 14403509
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataaca 105  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||    
T  14403554 gggtgagtttgttttaagtttatcaaatttatttttagaaataaca 14403509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 13760692 - 13760736
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||    
T  13760692 gtgtgtttgtttcaagtttgccaaatttatttctaggaataacat 13760736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 20426832 - 20426784
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||||||    
T  20426832 atgggtgtgtttgtttaaagtttaccaaatttattcctaggaataacat 20426784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 25625054 - 25625094
Alignment:
Q  66 gtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  25625054 gtttgttttaaatttatcaaatttatttttaggaataacat 25625094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 28312042 - 28311998
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||    
T  28312042 gtgtgtttgtttcaagtttaccaaatttattcataggaataacat 28311998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 37233155 - 37233199
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||    
T  37233155 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 37233199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 11071390 - 11071444
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  11071390 gatgggaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 11071444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 41298255 - 41298216
Alignment:
Q  67 tttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  41298255 tttgttttaagtatatcaaatttatttttaggaataacat 41298216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 9734190 - 9734148
Alignment:
Q  64 gtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||    
T  9734190 gtgtttgttttaagtttaccaaatttatttctaggaataacat 9734148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 18714004 - 18713958
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| |||||| ||| ||||||||||| ||||||||||||    
T  18714004 gggtgtgtttgattcaagcttaccaaatttatttataggaataacat 18713958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 25444923 - 25444969
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||| ||||| |||||| ||||||||||||| |||||||||||    
T  25444923 gggtgtgtatgttttaagtttgtcaaatttattttaaggaataacat 25444969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 5003182 - 5003137
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||| || |||| ||||||||||| ||||||||||||    
T  5003182 ggtgtgtttgtttaaaatttaccaaatttatttataggaataacat 5003137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 14253254 - 14253295
Alignment:
Q  65 tgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  14253254 tgtttgttttaaatttaccaaatttatttttaggaataacat 14253295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 14253360 - 14253393
Alignment:
Q  126 tatttaggaaaaatatgtttggtcaactttataa 159  Q
    ||||||||||||||||||||||| ||||||||||    
T  14253360 tatttaggaaaaatatgtttggttaactttataa 14253393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 37851617 - 37851662
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||| || |||||||||| |||||| |||||||||||    
T  37851617 ggtgtgtttgttttaaatttatcaaatctattttcaggaataacat 37851662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 39819414 - 39819459
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||| |||| ||||||||||  ||||||||||||    
T  39819414 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacat 39819459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 2521575 - 2521611
Alignment:
Q  218 catctccataaaaattttattcccacccttttccttg 254  Q
    ||||||||||  |||||||||||||||||||||||||    
T  2521575 catctccataggaattttattcccacccttttccttg 2521611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 4875506 - 4875542
Alignment:
Q  67 tttgtttcaagtttatcaaatttatttttaggaataa 103  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  4875506 tttgtttcaagtttgtcaaatttattcttaggaataa 4875542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 14832536 - 14832580
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| |||||||||||  | |||||||||    
T  14832536 gtgtgtttgtttcaagtttaccaaatttatttccaagaataacat 14832580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 36590915 - 36590875
Alignment:
Q  66 gtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||| |||||||  |||||||||||||||||||||||    
T  36590915 gtttgttttaagtttactaaatttatttttaggaataacat 36590875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 41750336 - 41750368
Alignment:
Q  127 atttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||||||||||||||||||| ||||||||||    
T  41750336 atttaggaaaaatatgtttggttaactttataa 41750368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 32202660 - 32202615
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32202660 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 32202615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 25789485 - 25789533
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25789485 atgggtgtgtttgtttcaagtttatcaaatttatttctaggaataacat 25789533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 1597689 - 1597644
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1597689 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacat 1597644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 3939223 - 3939271
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  3939223 atgggtgtgtttgttttaagtttatcaaatatatttttaggaataacat 3939271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 48916368 - 48916324
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  48916368 gtgtgtttgtttcaagtttatcaaatttattcttaggaataacat 48916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 9011510 - 9011467
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataa 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  9011510 gggtgtgtttgttttaagtttatcaaatttatttttaggaataa 9011467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 8331738 - 8331784
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  8331738 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 8331784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 25473979 - 25474025
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  25473979 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 25474025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 29091396 - 29091442
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  29091396 gggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 29091442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 52630497 - 52630543
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  52630497 gggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 52630543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 9832216 - 9832172
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  9832216 gtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 9832172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 13932218 - 13932174
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  13932218 gtgtgtttgtttcaagtttatcaaatttatttcaaggaataacat 13932174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 20260436 - 20260388
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  20260436 atgggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 20260388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 39930179 - 39930227
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  39930179 atgggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 39930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 37261546 - 37261589
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  37261546 tgtgtttgtttcaagtttatcaaatttatttttatgattaacat 37261589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 1007537 - 1007571
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatt 92  Q
    |||||||||||||||||||||||||||||||||||    
T  1007537 atgggtgtgtttgtttcaagtttatcaaatttatt 1007571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 5806624 - 5806578
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  5806624 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 5806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 6911209 - 6911255
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  6911209 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 6911255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 9115561 - 9115607
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  9115561 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 9115607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 12190525 - 12190479
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  || |||||||||    
T  12190525 gggtgtgtttgtttcaagtttatcaaatttattcctaagaataacat 12190479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 14788447 - 14788493
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||||    
T  14788447 gggtgtgtttgttttaagtttaccaaatttattcttaggaataacat 14788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 36361507 - 36361553
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  36361507 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 36361553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 46666432 - 46666478
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  46666432 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 46666478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 46960352 - 46960398
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||    
T  46960352 gggtgtgtttgtttcaaatttatcaaatttattcctaggaataacat 46960398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 47031583 - 47031629
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  47031583 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 47031629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 49824067 - 49824025
Alignment:
Q  64 gtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  49824067 gtgtttgtttcaagtttatcaaatttattcctaggaataacat 49824025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 50191112 - 50191066
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  50191112 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 50191066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 19923810 - 19923765
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  19923810 ggtgtgtttgttttaagttcatcaaatttatttttagaaataacat 19923765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 37436966 - 37436921
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||    
T  37436966 ggtgtgtttgtttcaagtttaccaaatttattcttaagaataacat 37436921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 39329347 - 39329392
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  39329347 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 39329392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 11014882 - 11014842
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataa 103  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  11014882 tgtgtttgttttaaatttatcaaatttatttttaggaataa 11014842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 48462258 - 48462302
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||    
T  48462258 gtgtatttgttttaagtttatcaaatttatttttatgaataacat 48462302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 1597628 - 1597574
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  1597628 gatgggaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 1597574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 4683718 - 4683675
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||| |||||||||||||||||||||||||| || |||||||||    
T  4683718 tgtgattgtttcaagtttatcaaatttatttctaagaataacat 4683675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 5518789 - 5518735
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  |||||||||||||||||||| ||| ||||||||||    
T  5518789 gatgggaattttattccaaggtatttaggaaaaatatgttcggttaactttataa 5518735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 47845476 - 47845433
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| || |||||||||||||||||||| ||||||||    
T  47845476 tgtgtttgttttaactttatcaaatttatttttagcaataacat 47845433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 49627301 - 49627344
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||| |||| |||||||||||||| |||||||||    
T  49627301 tgtgtttgtttcaaatttaccaaatttatttttaagaataacat 49627344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 51445424 - 51445381
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||    
T  51445424 tgtgtttgtttcaagtttaccaaatttattcctaggaataacat 51445381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 2632577 - 2632623
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||| |||||||||||||||  |||||||||| ||||||||||||    
T  2632577 gggtgtatttgtttcaagtttactaaatttatttctaggaataacat 2632623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 2632644 - 2632693
Alignment:
Q  112 gaattttattccagt--atttaggaaaaatatgtttggtcaactttataa 159  Q
    ||||||||||||||   |||||||||||||||||||||| ||||||||||    
T  2632644 gaattttattccagcgaatttaggaaaaatatgtttggttaactttataa 2632693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 17475657 - 17475611
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||| |||||||||||||||||||||||  || |||||||||    
T  17475657 gggtgtgttcgtttcaagtttatcaaatttattcctaagaataacat 17475611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 24116682 - 24116636
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||| ||||||| |||||||||| ||| |||||||||    
T  24116682 gggtgtgtttgttttaagtttaacaaatttattcttaagaataacat 24116636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 38965027 - 38964981
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||| ||||||| ||||||||||  ||||||||||||    
T  38965027 gggtgtgtttgttttaagtttaccaaatttattcctaggaataacat 38964981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 47677366 - 47677411
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataa 103  Q
    |||||||||||| ||| |||||||| ||||||||| ||||||||||    
T  47677366 atgggtgtgtttatttaaagtttatgaaatttattcttaggaataa 47677411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 52186344 - 52186299
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||| ||||||| ||||||| |||||||||||| |||||||||||    
T  52186344 ggtgtatttgttttaagtttaccaaatttattttaaggaataacat 52186299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 4683676 - 4683605
Alignment:
Q  90 atttttaggaataacatgatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||| ||||||  | |||| |||||||||||||  | |||||||||||||||||||||| | ||||||||    
T  4683676 attttttggaatataaagatgggaattttattccaaggaatttaggaaaaatatgtttggttagctttataa 4683605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 13653581 - 13653621
Alignment:
Q  66 gtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||| ||||||||||  ||||||||||||    
T  13653581 gtttgtttcaagtttaccaaatttattcctaggaataacat 13653621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 45771816 - 45771848
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatt 92  Q
    |||||||||||||||||||||| ||||||||||    
T  45771816 gggtgtgtttgtttcaagtttaccaaatttatt 45771848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 8406617 - 8406663
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  8406617 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacat 8406663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 12970878 - 12970832
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  12970878 gggtgtgtttgtttcaagtttatcaaatttatttctaggaataacat 12970832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 26637369 - 26637323
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26637369 gggtgtgtttatttcaagtttatcaaatttatttttaggaataacat 26637323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 28602279 - 28602325
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  28602279 gggtgtgtttgtttcaagtttaccaaatttatttttaggaataacat 28602325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 32535660 - 32535706
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  32535660 gggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 32535706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 42012530 - 42012486
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  42012530 gtgtgtttgtttcaagtttactaaatttatttttaggaataacat 42012486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 36978478 - 36978435
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  36978478 tgtgtttgtttcaagtttattaaatttatttataggaataacat 36978435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 4765908 - 4765862
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  4765908 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 4765862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 6091438 - 6091484
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  6091438 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 6091484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 18411932 - 18411978
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  18411932 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 18411978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 22936260 - 22936214
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  22936260 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 22936214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 28429451 - 28429497
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  28429451 gggtgtgtttgtttcaagtttaccaaatttatttctagaaataacat 28429497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 29543363 - 29543317
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  29543363 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 29543317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 556053 - 556008
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  556053 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 556008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 11856001 - 11855957
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||    
T  11856001 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 11855957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 19065855 - 19065807
Alignment:
Q  58 atgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||| ||||||||||||||||||| ||||||||||  ||||||||||||    
T  19065855 atggatgtgtttgtttcaagtttaccaaatttattcctaggaataacat 19065807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 27481082 - 27481126
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||    
T  27481082 gtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 27481126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 11855941 - 11855887
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  11855941 gatgagaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 11855887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 20962286 - 20962329
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||    
T  20962286 tgtgtttgttttaagtttatcaaatttattcataggaataacat 20962329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 6930365 - 6930411
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||| ||||||||||||||||||  || |||||||||    
T  6930365 gggtgtgtttgttttaagtttatcaaatttattcatatgaataacat 6930411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 14207169 - 14207123
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||  |||||||||  ||||||||||||    
T  14207169 gggtgtgtttgtttcaagtttacaaaatttattcctaggaataacat 14207123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 27480735 - 27480777
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataa 103  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||    
T  27480735 ggtgtgtttattttaagtttaccaaatttatttttaggaataa 27480777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 43347242 - 43347196
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||   ||||||||| |||||||||||||    
T  43347242 gggtgtgtttgtttcaagttttcgaaatttattcttaggaataacat 43347196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 36703506 - 36703551
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||| |||| ||||||||||  ||||||||||||    
T  36703506 ggtgtgtttgtttcaaatttaccaaatttattcataggaataacat 36703551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 7441579 - 7441607
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatt 88  Q
    |||||||||||||||||||||||||||||    
T  7441579 gggtgtgtttgtttcaagtttatcaaatt 7441607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 14207085 - 14207053
Alignment:
Q  127 atttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||||||||||||||||||| ||||||||||    
T  14207085 atttaggaaaaatatgtttggttaactttataa 14207053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 27822994 - 27823040
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  27822994 gggtgtgtttgtttcaagtttaccaaatttatttttaggaataacat 27823040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 10823065 - 10822949
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat---------------gatgtgaattttattcca--gtatttaggaaaaatatg 142  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||               |||| |||||||||||||  ||||||||||||||||||    
T  10823065 gggtgtgtttgtttcaagtttagcaaatttatttctaggaataacattccttacaatataaagatgagaattttattccaaggtatttaggaaaaatatg 10822966  T
Q  143 tttggtcaactttataa 159  Q
    |||||| ||||||||||    
T  10822965 tttggttaactttataa 10822949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 6231849 - 6231803
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  6231849 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 6231803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 8476656 - 8476610
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  8476656 gggtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 8476610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 44952031 - 44952077
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  44952031 gggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 44952077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 46359675 - 46359721
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  46359675 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 46359721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 1098923 - 1098968
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  1098923 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 1098968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 43719271 - 43719227
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  43719271 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 43719227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 43132442 - 43132388
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  43132442 gatgagaattttattccaaggtatttaggaaaaatatgtttggttaactttataa 43132388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 9320797 - 9320751
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||    
T  9320797 gggtgtgtttgtttcaagtttatgaaatttattcataggaataacat 9320751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 11239468 - 11239422
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  11239468 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 11239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 20297516 - 20297562
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||||    
T  20297516 gggtgtgtttgttttaagtttaccaaatttattcttaggaataacat 20297562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 24574290 - 24574336
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  24574290 gggtgtgtttgtttcaagtttaccaaatttattcataggaataacat 24574336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 26848745 - 26848791
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  26848745 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 26848791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 103
Target Start/End: Complemental strand, 26849492 - 26849450
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataa 103  Q
    ||||||||||||| ||||||| |||||||||||||||||||||    
T  26849492 ggtgtgtttgttttaagtttaccaaatttatttttaggaataa 26849450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 33218261 - 33218215
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  33218261 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 33218215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 40907989 - 40908035
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  40907989 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 40908035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 48340105 - 48340059
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  48340105 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 48340059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 53166072 - 53166026
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||| ||||||||| || |||||||||    
T  53166072 gggtgtgtttgtttcaagtttatccaatttatttctaagaataacat 53166026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 12228601 - 12228556
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||    
T  12228601 ggtgtgtttgttacaagtttatcaaatttattcttgggaataacat 12228556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 20414812 - 20414767
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  20414812 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 20414767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 28124779 - 28124738
Alignment:
Q  65 tgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  28124779 tgtttgtttcaagtttaccaaatttatttttaggattaacat 28124738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 31267694 - 31267649
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||| |||||||||  |||||||||||||||||||||    
T  31267694 ggtgtgtttgttttaagtttatcggatttatttttaggaataacat 31267649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 33650357 - 33650316
Alignment:
Q  65 tgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||| |||||||||||||| |||||||||    
T  33650357 tgtttgtttcaagtttaccaaatttatttttatgaataacat 33650316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 18460582 - 18460622
Alignment:
Q  66 gtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  18460582 gtttgtttcaagtttatcaaatttatttctacgaataacat 18460622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 43132502 - 43132458
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||    
T  43132502 gtgtgtttgtttcaagtttactaaatttattcttaggaataacat 43132458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 6927817 - 6927860
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||    
T  6927817 tgtgtttgttttaagtttatcaaatttattactaggaataacat 6927860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 99
Target Start/End: Original strand, 13642826 - 13642861
Alignment:
Q  64 gtgtttgtttcaagtttatcaaatttatttttagga 99  Q
    |||||||||| |||||||||||||||||||||||||    
T  13642826 gtgtttgttttaagtttatcaaatttatttttagga 13642861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 26848807 - 26848861
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  26848807 gatgagaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 26848861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 28770558 - 28770511
Alignment:
Q  59 tgggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||| |||| ||||||||||  ||||||||||||    
T  28770558 tgggtgtgtttgtttcaaatttaccaaatttattcctaggaataacat 28770511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 31611330 - 31611287
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||    
T  31611330 tgtgtttgtttcaagtttaccaaatttattcttatgaataacat 31611287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 33218199 - 33218145
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  33218199 gatgagaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 33218145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 44952093 - 44952147
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  44952093 gatgggaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 44952147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 47115202 - 47115159
Alignment:
Q  63 tgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||    
T  47115202 tgtgtttgtttcaagtttaccaaatttattcctaggaataacat 47115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 19532950 - 19532984
Alignment:
Q  125 gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||||||||||||||||||||| ||||||||||    
T  19532950 gtatttaggaaaaatatgtttggttaactttataa 19532984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 29512324 - 29512369
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||| |||| ||||||||||  ||||||||||||    
T  29512324 ggtgtgtttgtttcaaatttaccaaatttattcctaggaataacat 29512369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 19532912 - 19532944
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatt 92  Q
    |||||||||||||||||||||| ||||||||||    
T  19532912 gggtgtgtttgtttcaagtttaccaaatttatt 19532944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 21925864 - 21925832
Alignment:
Q  65 tgtttgtttcaagtttatcaaatttatttttag 97  Q
    ||||||||||||||||| |||||||||||||||    
T  21925864 tgtttgtttcaagtttaccaaatttatttttag 21925832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 24783934 - 24783978
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| ||||||||||  || |||||||||    
T  24783934 gtgtgtttgtttcaagtttaccaaatttattcataagaataacat 24783978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 38140710 - 38140670
Alignment:
Q  66 gtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||| ||||| |||||||||| ||||||||||||    
T  38140710 gtttgtttcaattttataaaatttatttctaggaataacat 38140670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 49216085 - 49216140
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataaa 160  Q
    |||| |||||||||||||  |||||||| ||||||||||||||| ||| |||||||    
T  49216085 gatgggaattttattccaaggtatttagaaaaaatatgtttggttaaccttataaa 49216140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 53166003 - 53165956
Alignment:
Q  114 attttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||||||||||  |||||||||||||||||||||||| ||| ||||||    
T  53166003 attttattccaaggtatttaggaaaaatatgtttggttaaccttataa 53165956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 16968649 - 16968694
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  16968649 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacat 16968694  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 2657423 - 2657469
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  2657423 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 2657469  T

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Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 7053926 - 7053880
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||    
T  7053926 gggtgtgtttgtttcaagtttaccaaatttattcttaggaataacat 7053880  T

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Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 18897644 - 18897690
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  18897644 gggtgtgtttgtttcaagtttatcaaatttattcctaggaataacat 18897690  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 14170740 - 14170784
Alignment:
Q  62 gtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||    
T  14170740 gtgtgtttgtttcaagtttaccaaatttatttctaggaataacat 14170784  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 1316742 - 1316788
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  1316742 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 1316788  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 8029026 - 8029072
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  8029026 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 8029072  T

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Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 10246464 - 10246418
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  10246464 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 10246418  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 9762387 - 9762342
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||    
T  9762387 ggtgtgtttgtttcaagtttaccaagtttattattaggaataacat 9762342  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 21008322 - 21008281
Alignment:
Q  65 tgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  21008322 tgtttgtttcaagtttattaaatttatttttatgaataacat 21008281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 2657485 - 2657539
Alignment:
Q  107 gatgtgaattttattcca--gtatttaggaaaaatatgtttggtcaactttataa 159  Q
    |||| |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  2657485 gatgggaattttattccaaggaatttaggaaaaatatgtttggttaactttataa 2657539  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 6706100 - 6706054
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  6706100 gggtatgtttgtttcaagtttaccaattttatttctaggaataacat 6706054  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 11570131 - 11570086
Alignment:
Q  61 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    ||||| ||||||||||||||| ||||||||||  ||||||||||||    
T  11570131 ggtgtctttgtttcaagtttaccaaatttattcctaggaataacat 11570086  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 201649 - 201695
Alignment:
Q  60 gggtgtgtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  201649 gggtgtgtttgtttcaagtttaccaaatttattcctaggaataacat 201695  T

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Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 143342 - 143382
Alignment:
Q  66 gtttgtttcaagtttatcaaatttatttttaggaataacat 106  Q
    |||||||||||||||| ||||||||||  ||||||||||||    
T  143342 gtttgtttcaagtttaccaaatttattcctaggaataacat 143382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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