View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11890_low_12 (Length: 327)

Name: NF11890_low_12
Description: NF11890
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11890_low_12
NF11890_low_12
[»] chr4 (48 HSPs)
chr4 (176-310)||(47426121-47426253)
chr4 (29-127)||(47426276-47426374)
chr4 (34-163)||(30415849-30415977)
chr4 (34-163)||(6279921-6280049)
chr4 (34-163)||(34049597-34049725)
chr4 (34-163)||(39730293-39730421)
chr4 (34-163)||(936073-936201)
chr4 (34-163)||(45747796-45747924)
chr4 (34-163)||(55968000-55968128)
chr4 (35-163)||(27762899-27763026)
chr4 (34-163)||(35999633-35999761)
chr4 (34-163)||(40435847-40435975)
chr4 (34-163)||(43723211-43723339)
chr4 (34-163)||(45596215-45596343)
chr4 (34-163)||(48518891-48519019)
chr4 (34-163)||(48879272-48879400)
chr4 (34-161)||(41744222-41744349)
chr4 (34-165)||(13229987-13230117)
chr4 (34-161)||(18931700-18931826)
chr4 (33-163)||(41859047-41859176)
chr4 (36-121)||(12275953-12276037)
chr4 (34-163)||(18405234-18405362)
chr4 (34-163)||(23686734-23686862)
chr4 (34-163)||(39498772-39498900)
chr4 (34-163)||(39502111-39502239)
chr4 (34-163)||(42773895-42774023)
chr4 (34-158)||(10400810-10400933)
chr4 (67-163)||(27555390-27555485)
chr4 (34-125)||(8322192-8322282)
chr4 (34-163)||(25916035-25916161)
chr4 (34-125)||(50672943-50673033)
chr4 (34-163)||(25932388-25932516)
chr4 (34-163)||(39835307-39835435)
chr4 (34-126)||(7258910-7259000)
chr4 (34-162)||(47670309-47670436)
chr4 (34-105)||(48060002-48060073)
chr4 (34-163)||(32953470-32953598)
chr4 (36-105)||(34238011-34238080)
chr4 (36-104)||(52469647-52469715)
chr4 (35-134)||(18405701-18405799)
chr4 (34-93)||(31937938-31937997)
chr4 (34-159)||(27942684-27942814)
chr4 (47-163)||(26165324-26165439)
chr4 (57-93)||(52414189-52414225)
chr4 (34-93)||(36858445-36858504)
chr4 (67-144)||(38414186-38414260)
chr4 (34-102)||(44309708-44309775)
chr4 (35-163)||(51968725-51968852)
[»] chr1 (56 HSPs)
chr1 (28-163)||(1007685-1007819)
chr1 (33-163)||(1597342-1597471)
chr1 (34-163)||(3572565-3572693)
chr1 (33-163)||(5518504-5518633)
chr1 (34-163)||(2430440-2430568)
chr1 (34-163)||(2632796-2632924)
chr1 (34-163)||(12190177-12190305)
chr1 (34-163)||(39329552-39329680)
chr1 (34-163)||(48916022-48916150)
chr1 (34-163)||(8331958-8332086)
chr1 (35-144)||(37436640-37436748)
chr1 (34-163)||(46666652-46666780)
chr1 (34-163)||(47037401-47037529)
chr1 (34-163)||(52630717-52630845)
chr1 (34-141)||(13653795-13653901)
chr1 (34-161)||(32824866-32824992)
chr1 (34-164)||(39930401-39930530)
chr1 (34-163)||(9115781-9115909)
chr1 (34-163)||(14788667-14788795)
chr1 (34-163)||(20260086-20260214)
chr1 (34-163)||(35187400-35187528)
chr1 (34-162)||(25789707-25789834)
chr1 (36-160)||(52186049-52186172)
chr1 (34-157)||(30240954-30241075)
chr1 (34-160)||(36361726-36361851)
chr1 (33-161)||(9831872-9831999)
chr1 (52-163)||(6911455-6911565)
chr1 (34-161)||(50190767-50190893)
chr1 (34-124)||(4683413-4683502)
chr1 (34-163)||(29091610-29091738)
chr1 (33-86)||(11077998-11078051)
chr1 (34-125)||(11014479-11014569)
chr1 (34-163)||(6978714-6978842)
chr1 (67-144)||(20505008-20505084)
chr1 (34-159)||(38964683-38964807)
chr1 (35-104)||(46960572-46960641)
chr1 (34-163)||(5806291-5806415)
chr1 (34-119)||(13521265-13521349)
chr1 (49-98)||(19094072-19094121)
chr1 (70-163)||(49822917-49823009)
chr1 (36-104)||(13931942-13932009)
chr1 (40-124)||(17475360-17475443)
chr1 (49-93)||(45772040-45772084)
chr1 (37-125)||(52699504-52699591)
chr1 (66-124)||(9011200-9011257)
chr1 (34-160)||(51445083-51445207)
chr1 (34-163)||(19083105-19083233)
chr1 (34-163)||(19130993-19131121)
chr1 (34-127)||(37261792-37261883)
chr1 (34-82)||(26384085-26384133)
chr1 (49-162)||(24116338-24116448)
chr1 (49-99)||(37726983-37727033)
chr1 (49-98)||(52276879-52276926)
chr1 (35-92)||(1227948-1228005)
chr1 (34-95)||(28735109-28735170)
chr1 (36-92)||(37336514-37336570)
[»] chr2 (44 HSPs)
chr2 (33-163)||(1988253-1988382)
chr2 (34-163)||(37533895-37534023)
chr2 (34-163)||(346345-346473)
chr2 (34-163)||(6171734-6171862)
chr2 (34-163)||(11071548-11071676)
chr2 (35-163)||(20426483-20426610)
chr2 (34-163)||(2521618-2521746)
chr2 (35-159)||(28311701-28311824)
chr2 (35-159)||(37233373-37233496)
chr2 (34-161)||(2050809-2050935)
chr2 (34-161)||(37192465-37192591)
chr2 (52-163)||(21737400-21737510)
chr2 (52-163)||(39995131-39995241)
chr2 (34-144)||(14253465-14253574)
chr2 (33-163)||(45409192-45409321)
chr2 (34-159)||(638536-638660)
chr2 (34-163)||(5770110-5770238)
chr2 (34-163)||(14777498-14777626)
chr2 (34-163)||(17965926-17966054)
chr2 (34-163)||(34356700-34356828)
chr2 (34-163)||(42674661-42674789)
chr2 (34-165)||(9733844-9733974)
chr2 (33-159)||(14832752-14832877)
chr2 (34-160)||(18713660-18713785)
chr2 (33-163)||(27357963-27358092)
chr2 (34-163)||(4559502-4559630)
chr2 (34-163)||(40950859-40950987)
chr2 (34-163)||(41729130-41729258)
chr2 (35-163)||(45694132-45694259)
chr2 (34-144)||(6571630-6571739)
chr2 (34-144)||(26310210-26310321)
chr2 (34-162)||(41750472-41750599)
chr2 (34-161)||(11763374-11763499)
chr2 (35-163)||(25454968-25455095)
chr2 (34-93)||(23944106-23944165)
chr2 (35-98)||(40569964-40570027)
chr2 (34-91)||(516463-516520)
chr2 (34-163)||(5002837-5002964)
chr2 (50-91)||(41297989-41298030)
chr2 (54-93)||(1723297-1723336)
chr2 (48-161)||(24499399-24499509)
chr2 (34-127)||(3902399-3902491)
chr2 (34-98)||(25724968-25725033)
chr2 (34-102)||(13539611-13539679)
[»] chr7 (46 HSPs)
chr7 (35-163)||(41684022-41684149)
chr7 (34-163)||(44565988-44566116)
chr7 (34-163)||(45045569-45045697)
chr7 (34-163)||(25098012-25098140)
chr7 (34-163)||(35488189-35488317)
chr7 (34-163)||(40212832-40212960)
chr7 (34-124)||(10902689-10902778)
chr7 (34-160)||(48341306-48341430)
chr7 (34-163)||(48314065-48314193)
chr7 (34-162)||(45265049-45265176)
chr7 (33-163)||(18824087-18824217)
chr7 (34-163)||(9946990-9947118)
chr7 (34-163)||(11329936-11330064)
chr7 (34-163)||(27213855-27213983)
chr7 (34-163)||(28904186-28904314)
chr7 (34-159)||(45448885-45449009)
chr7 (52-163)||(33378803-33378913)
chr7 (34-144)||(38396385-38396494)
chr7 (34-163)||(27248236-27248364)
chr7 (34-163)||(27419224-27419352)
chr7 (34-163)||(39554126-39554254)
chr7 (62-163)||(48160591-48160691)
chr7 (34-163)||(9814218-9814342)
chr7 (34-162)||(41632365-41632492)
chr7 (33-163)||(25045618-25045746)
chr7 (34-163)||(8419589-8419717)
chr7 (34-163)||(25924637-25924765)
chr7 (34-163)||(38544137-38544265)
chr7 (34-162)||(43949188-43949315)
chr7 (33-163)||(11000644-11000774)
chr7 (34-125)||(16825392-16825482)
chr7 (34-127)||(30871131-30871223)
chr7 (33-105)||(45723091-45723163)
chr7 (34-93)||(30686061-30686120)
chr7 (34-125)||(34930504-34930595)
chr7 (106-162)||(45723221-45723277)
chr7 (34-161)||(44820197-44820323)
chr7 (35-160)||(6656476-6656598)
chr7 (37-93)||(38528776-38528832)
chr7 (34-93)||(37534172-37534231)
chr7 (71-161)||(6656226-6656315)
chr7 (35-105)||(43445940-43446010)
chr7 (1-30)||(6174054-6174083)
chr7 (34-99)||(22156242-22156307)
chr7 (34-99)||(22212157-22212222)
chr7 (33-93)||(45440849-45440909)
[»] chr8 (35 HSPs)
chr8 (34-163)||(1554354-1554482)
chr8 (34-163)||(16313507-16313635)
chr8 (34-163)||(32660933-32661061)
chr8 (34-163)||(37392546-37392674)
chr8 (34-164)||(18726618-18726747)
chr8 (34-144)||(26601957-26602065)
chr8 (34-163)||(35394333-35394461)
chr8 (34-163)||(35818424-35818552)
chr8 (34-163)||(38132737-38132865)
chr8 (34-163)||(38364024-38364152)
chr8 (34-162)||(33444627-33444752)
chr8 (34-157)||(3049952-3050074)
chr8 (33-144)||(29421508-29421618)
chr8 (49-163)||(7317332-7317444)
chr8 (33-163)||(25837853-25837982)
chr8 (34-163)||(12710588-12710716)
chr8 (34-165)||(18298055-18298185)
chr8 (34-163)||(10896217-10896345)
chr8 (40-161)||(21137134-21137254)
chr8 (34-163)||(26062087-26062215)
chr8 (34-163)||(41228714-41228842)
chr8 (34-162)||(42755810-42755937)
chr8 (34-105)||(31117587-31117658)
chr8 (34-165)||(40197074-40197204)
chr8 (34-159)||(7931182-7931306)
chr8 (35-104)||(15226908-15226977)
chr8 (33-93)||(5749657-5749716)
chr8 (35-93)||(12650079-12650137)
chr8 (35-101)||(25899577-25899642)
chr8 (35-125)||(41432685-41432773)
chr8 (40-98)||(43872030-43872088)
chr8 (35-124)||(38437398-38437486)
chr8 (34-125)||(14763969-14764059)
chr8 (33-161)||(5020492-5020622)
chr8 (35-87)||(6805698-6805750)
[»] chr6 (17 HSPs)
chr6 (34-163)||(14170956-14171084)
chr6 (33-163)||(6705765-6705894)
chr6 (34-163)||(2657643-2657771)
chr6 (34-133)||(7344113-7344211)
chr6 (52-163)||(7053570-7053680)
chr6 (34-144)||(16968868-16968977)
chr6 (33-163)||(1316960-1317089)
chr6 (34-144)||(21008043-21008152)
chr6 (34-160)||(18897864-18897989)
chr6 (35-124)||(345870-345958)
chr6 (35-127)||(9760406-9760497)
chr6 (74-163)||(8029316-8029404)
chr6 (33-98)||(10849847-10849912)
chr6 (36-93)||(14781689-14781746)
chr6 (2-38)||(9644688-9644724)
chr6 (2-38)||(9650705-9650741)
chr6 (54-82)||(30588040-30588068)
[»] chr5 (31 HSPs)
chr5 (34-163)||(4765560-4765688)
chr5 (34-163)||(19065505-19065633)
chr5 (35-144)||(27480953-27481061)
chr5 (33-162)||(6930582-6930714)
chr5 (34-160)||(11855658-11855783)
chr5 (34-163)||(12970530-12970658)
chr5 (34-157)||(8406837-8406959)
chr5 (34-139)||(8646415-8646519)
chr5 (34-163)||(29543015-29543143)
chr5 (34-163)||(36703817-36703945)
chr5 (34-163)||(555706-555834)
chr5 (34-163)||(14206821-14206949)
chr5 (61-161)||(26637045-26637144)
chr5 (33-159)||(6091657-6091782)
chr5 (34-163)||(18412152-18412280)
chr5 (34-125)||(32535880-32535970)
chr5 (34-163)||(42012179-42012307)
chr5 (34-163)||(22935912-22936040)
chr5 (34-163)||(28602499-28602626)
chr5 (30-163)||(27481297-27481428)
chr5 (36-91)||(30899500-30899555)
chr5 (35-102)||(35348586-35348652)
chr5 (34-102)||(28023776-28023844)
chr5 (35-125)||(20962534-20962623)
chr5 (54-124)||(28429664-28429733)
chr5 (35-104)||(40275813-40275882)
chr5 (34-102)||(19089777-19089845)
chr5 (65-97)||(35602888-35602920)
chr5 (67-162)||(15200547-15200641)
chr5 (66-127)||(830056-830116)
chr5 (2-38)||(9395342-9395378)
[»] chr3 (38 HSPs)
chr3 (34-165)||(6231499-6231629)
chr3 (34-163)||(26848965-26849093)
chr3 (34-163)||(40908208-40908336)
chr3 (33-163)||(31435923-31436052)
chr3 (34-159)||(33217917-33218041)
chr3 (66-163)||(43132157-43132253)
chr3 (34-145)||(31611003-31611113)
chr3 (34-163)||(8476308-8476436)
chr3 (34-163)||(11239120-11239248)
chr3 (34-163)||(20297736-20297864)
chr3 (52-163)||(24574536-24574646)
chr3 (34-164)||(28124435-28124564)
chr3 (34-160)||(48339760-48339885)
chr3 (34-163)||(9320448-9320576)
chr3 (34-163)||(44952251-44952379)
chr3 (35-124)||(53165764-53165852)
chr3 (35-125)||(46359896-46359985)
chr3 (34-163)||(20414465-20414593)
chr3 (34-161)||(1099141-1099267)
chr3 (34-144)||(10822737-10822846)
chr3 (34-163)||(47114857-47114985)
chr3 (33-105)||(18460881-18460953)
chr3 (29-93)||(28139789-28139853)
chr3 (37-89)||(45826723-45826775)
chr3 (34-125)||(12228294-12228384)
chr3 (34-105)||(43718987-43719058)
chr3 (34-144)||(1246921-1247030)
chr3 (33-163)||(28770210-28770339)
chr3 (34-124)||(33497800-33497889)
chr3 (35-104)||(12930999-12931067)
chr3 (38-102)||(6832016-6832079)
chr3 (34-93)||(29512635-29512694)
chr3 (53-104)||(40584562-40584613)
chr3 (56-125)||(39932561-39932631)
chr3 (79-124)||(26849194-26849238)
chr3 (36-93)||(32071390-32071446)
chr3 (54-99)||(33647766-33647811)
chr3 (1-37)||(6013329-6013365)
[»] scaffold0006 (3 HSPs)
scaffold0006 (34-163)||(201868-201996)
scaffold0006 (34-141)||(143556-143662)
scaffold0006 (35-125)||(119264-119353)
[»] scaffold0189 (1 HSPs)
scaffold0189 (34-158)||(28957-29080)
[»] scaffold0702 (1 HSPs)
scaffold0702 (35-163)||(3565-3692)
[»] scaffold0662 (1 HSPs)
scaffold0662 (35-163)||(4412-4539)
[»] scaffold0238 (1 HSPs)
scaffold0238 (67-144)||(23315-23391)
[»] scaffold0069 (1 HSPs)
scaffold0069 (44-98)||(21854-21908)
[»] scaffold1480 (1 HSPs)
scaffold1480 (41-98)||(449-506)


Alignment Details
Target: chr4 (Bit Score: 111; Significance: 5e-56; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 176 - 310
Target Start/End: Complemental strand, 47426253 - 47426121
Alignment:
Q  176 tttgtttgacacatctccttctttatcccaaaattaaataaacgtctgtcacacgcctgaataatttaatttcaattgtaaatatgcaaactcattgatg 275  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47426253 tttgtttggcacatctccttctttatcccaaa-ttaaataaacgtctgtcacacgcctgaataatt-aatttcaattgtaaatatgcaaactcattgatg 47426156  T
Q  276 ttaacataacaagtggtgtgtgtggggattctttt 310  Q
    |||||||||||||||||||||||||||||| ||||    
T  47426155 ttaacataacaagtggtgtgtgtggggattatttt 47426121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 47426374 - 47426276
Alignment:
Q  29 taatatttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctc 127  Q
    ||||||||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  47426374 taatatttttctatttccaggaacattttatatcaagaaataaaatttagtaaacttgtaacaaacatagacatataatattcatatcattttattctc 47426276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 30415849 - 30415977
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| |||||||||||||||   | ||||||||||| ||||||||||||||| | |||||||| ||||||||||||||||||| |||  |||    
T  30415849 tttttctattccaaagaacattttatatttgggaataaaatttagtaaacttgtaacaaacacagacatat-atattcctatcattttattatcgggaat 30415947  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||||||| | ||||| ||||||||||    
T  30415948 caacaaatataacttgaaacaaacacaccc 30415977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 6280049 - 6279921
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||||||||| | |||| ||||||||||||| ||  |||    
T  6280049 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatat-acattcatatcattttattcccgggaat 6279951  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  6279950 caacaattataacttgaaacaaacacaccc 6279921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 34049725 - 34049597
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||  ||  |||    
T  34049725 tttttctattcccaggaacattttataccctggaataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttatttccgggaat 34049627  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  34049626 caacaattataacttgaaacaaacacaccc 34049597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 39730421 - 39730293
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||| ||  |||    
T  39730421 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttattcccgggaat 39730323  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||| || |||| | ||||| ||||||||||    
T  39730322 caaaaattataacttgaaacaaacacaccc 39730293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 936073 - 936201
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||  || | ||||||||||| ||||||||||||||| ||||  |||| ||||||| |||||||||||||||  |||    
T  936073 tttttctattcccaggaacattttatgcccgggaataaaatttagtaaacttgtaacaaacatagggatat-atattccaatcattttattctcgggaat 936171  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  936172 caacaattataacttgaaacaaacacaccc 936201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 45747924 - 45747796
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| | |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  45747924 tttttctattcctaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 45747826  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  45747825 caacaattataacttgaaacaaacacaccc 45747796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 55968128 - 55968000
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| | |||||||| | ||||| |||||||||||| ||  |||    
T  55968128 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacagagacatat-acattccaatcattttattcccgggaat 55968030  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  55968029 caacaattataacttgaaacaaacacaccc 55968000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 27763026 - 27762899
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  ||||    
T  27763026 ttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaatc 27762928  T
Q  135 aacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||| |||| | ||||| ||||||||||    
T  27762927 aacaattataacttgaaacaaacacaccc 27762899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 35999633 - 35999761
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  35999633 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgagaat 35999731  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  35999732 caacaattataacttgaaacaaacacaccc 35999761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 40435847 - 40435975
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  40435847 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 40435945  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  40435946 caacaattataacttgaaacaaacacaccc 40435975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 43723211 - 43723339
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| ||||||||||||| |||  |||    
T  43723211 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattttcgggaat 43723309  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  43723310 caacaattataacttgaaacaaacacaccc 43723339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 45596215 - 45596343
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| || ||||    
T  45596215 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgaaaat 45596313  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| |||| |||||    
T  45596314 caacaattataacttgaaacaaacgcaccc 45596343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 48519019 - 48518891
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| |  | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  48519019 tttttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 48518921  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||| || |||| | ||||| ||||||||||    
T  48518920 caaaaattataacttgaaacaaacacaccc 48518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 48879272 - 48879400
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  48879272 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 48879370  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  48879371 caacaattataacttgaaacaaacacaccc 48879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 41744349 - 41744222
Alignment:
Q  34 tttttctattcccaagaacattttatatcca-gaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    |||||||||||||| |||||||||||| | | |||||||| |||| ||||||||||||||| |||| ||||||  ||| |||||||||||||| || |||    
T  41744349 tttttctattcccaggaacattttataccaaagaaataaattttagtaaacttgtaacaaacataggcatatac-atttctatcattttattcccggaaa 41744251  T
Q  133 tcaacaaatatatcgtgaaagaaacacac 161  Q
    ||||||| |||| | ||||| ||||||||    
T  41744250 tcaacaattataacttgaaataaacacac 41744222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 165
Target Start/End: Complemental strand, 13230117 - 13229987
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  13230117 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 13230019  T
Q  134 caacaaatatatcgtgaaagaaacacacccct 165  Q
     || || |||| | ||||| ||||||||||||    
T  13230018 aaaaaattataacttgaaacaaacacacccct 13229987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 18931700 - 18931826
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||||||||||  | | ||||||||||| ||||||| || |||| |||||||||| | |||||||||||||||||| |  ||||    
T  18931700 tttttctattcccaggaacattttatacacgggaataaaatttagtaaacttataccaaacatagacatat-acattcctatcattttattcccagaaat 18931798  T
Q  134 caacaaatatatcgtgaaagaaacacac 161  Q
    |||||| |||| | ||||| ||||||||    
T  18931799 caacaattataacttgaaacaaacacac 18931826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 41859176 - 41859047
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| |||||||||||| |  | ||||||||  | ||||||||||||||| |||| ||||| | ||||| |||||||||||| || |||    
T  41859176 atttttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccggaaa 41859078  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||| |||| | ||||| ||||||||||    
T  41859077 tcaacaattataacttgaaacaaacacaccc 41859047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 12276037 - 12275953
Alignment:
Q  36 tttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcatttt 121  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||| ||||| ||||||||||    
T  12276037 tttctttttccaagaacattttatatccaggaataaaatttagtaaacttgtaacaaacataaacatat-atatttctatcatttt 12275953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 18405362 - 18405234
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||| |||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||| ||||||||||||  |||    
T  18405362 tttttttattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctataattttattctcgggaat 18405264  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  18405263 caacaattataacttgaaacaaacacaccc 18405234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 23686734 - 23686862
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  || |||||||| | || |||||| |||| ||||||||||||||| |||| ||||| ||||| |||||||||||||| ||  |||    
T  23686734 tttttctattcccagaaatattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-atatttctatcattttattcccgggaat 23686832  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  23686833 caacaattataacttgaaacaaacacaccc 23686862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 39498772 - 39498900
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| ||| |||||| | ||| |||||||||||||  ||  |||    
T  39498772 tttttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaacaaacataaacatat-acatttctatcattttatttccgggaat 39498870  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  39498871 caacaattataacttgaaacaaacacaccc 39498900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 39502111 - 39502239
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| ||| |||||| | ||| |||||||||||||  ||  |||    
T  39502111 tttttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaacaaacataaacatat-acatttctatcattttatttccgggaat 39502209  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  39502210 caacaattataacttgaaacaaacacaccc 39502239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 42773895 - 42774023
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||| ||| |||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| |  ||||    
T  42773895 tttttttatccccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccagaaat 42773993  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  42773994 caacaattataacttgaaacaaacacaccc 42774023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 10400933 - 10400810
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||| ||| ||| |||||||| |||  ||||||||||| ||||||||||| ||| |||||||||| | ||| |||||||||||||| |  ||||    
T  10400933 tttttctatttccaggaatattttatacccaagaataaaatttagtaaacttgtaataaacatagacatat-acatttctatcattttattcccaaaaat 10400835  T
Q  134 caacaaatatatcgtgaaagaaaca 158  Q
    ||||||||||| | ||||| |||||    
T  10400834 caacaaatataacttgaaacaaaca 10400810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 27555390 - 27555485
Alignment:
Q  67 aataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||| ||  ||||||||| |||| | ||||| ||||||||||    
T  27555390 aataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccc 27555485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 8322192 - 8322282
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    |||||||||||||||||| |||||||| | || |||||| |||| ||||||||||||||| |||||||||| | ||| ||||||||||||||    
T  8322192 tttttctattcccaagaatattttataccaaggaataaattttagtaaacttgtaacaaacatagacatat-acatttctatcattttattc 8322282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 25916161 - 25916035
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| || | ||||||||||| ||||||||||||||| |||| |||   | |||||||||||||||||| ||  |||    
T  25916161 tttttctattcccagaaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcat---acattcctatcattttattcccgggaat 25916065  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||| || |||| | ||||| ||||||||||    
T  25916064 caaaaattataacttgaaacaaacacaccc 25916035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 50673033 - 50672943
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    ||||||||||||||  ||||||||||| ||   ||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||||||    
T  50673033 tttttctattcccagaaacattttatacccgagaataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttattc 50672943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 25932388 - 25932516
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| ||||||||||||||     |||    
T  25932388 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcctaggaat 25932486  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  25932487 caacaattataacttgaaacaaacacaccc 25932516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 39835435 - 39835307
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||  ||||| | |||  ||||||||||||| ||  |||    
T  39835435 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatatgcatat-acatttatatcattttattcccgggaat 39835337  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  39835336 caacaattataacttgaaacaaacacaccc 39835307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 7258910 - 7259000
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattct 126  Q
    |||||||||||||| ||||||||||||  | ||||||||||||| ||||||||||||||| | |||||| | ||||| |||||||||||||||    
T  7258910 tttttctattcccaggaacattttatacgcggaaataaaatttagtaaacttgtaacaaacaaagacatgt-atatt-ctatcattttattct 7259000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 47670309 - 47670436
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||  |   |||    
T  47670309 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttatttccaggaat 47670407  T
Q  134 caacaaatatatcgtgaaagaaacacacc 162  Q
    |||||| |||| | ||||| |||||||||    
T  47670408 caacaattataacttgaaacaaacacacc 47670436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 105
Target Start/End: Original strand, 48060002 - 48060073
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatata 105  Q
    ||||||||||||||  || |||||||||||| ||||||||||||||||||| |||||||| ||| |||||||    
T  48060002 tttttctattcccataaatattttatatccaaaaataaaatttaataaactcgtaacaaacataaacatata 48060073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 32953470 - 32953598
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| | |||||||||||| ||   ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||| |||  |  |||    
T  32953470 tttttctattcctaggaacattttatacccgagaataaaatttagtaaacttgtaacaaagataggcatat-acattcctatcattttgttcctgggaat 32953568  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||| | ||||||||||    
T  32953569 caacaattataacttgagacaaacacaccc 32953598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 34238080 - 34238011
Alignment:
Q  36 tttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatata 105  Q
    ||||||||||||||||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||||    
T  34238080 tttctattcccaagaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatata 34238011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 52469647 - 52469715
Alignment:
Q  36 tttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatat 104  Q
    |||||||||| |  ||||||||||  || ||||||||||||||||||||||||||||| ||||||||||    
T  52469647 tttctattcctagaaacattttattgccggaaataaaatttaataaacttgtaacaaacatagacatat 52469715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 18405701 - 18405799
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||| | |||||||||||| | |||||||||||||  ||||||||||||||| ||||| || | |||||  |||| ||||||||||| |||||    
T  18405701 ttttctattcctaggaacattttatacctagaaataaaattttgtaaacttgtaacaaacatagatatgt-atatttatatcgttttattctcggaaatc 18405799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 31937997 - 31937938
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    ||||| ||||||||||||||||||||||   | ||||||||||||||||||| |||||||    
T  31937997 tttttttattcccaagaacattttatatttgggaataaaatttaataaacttctaacaaa 31937938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 27942684 - 27942814
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatata-----atattcctatcattttattctcg 128  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||| ||| ||| ||| ||||| |     | |||||||||||||||||  ||    
T  27942684 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttataataaacataaacatagacatatacattcctatcattttatttccg 27942783  T
Q  129 taaatcaacaaatatatcgtgaaagaaacac 159  Q
      ||||||||| |||| | ||||| ||||||    
T  27942784 ggaatcaacaattataacttgaaacaaacac 27942814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 26165324 - 26165439
Alignment:
Q  47 aagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatc 146  Q
    ||||||||||||||| ||  ||||||||||| ||||||||||||||| ||| |||| |   |||  ||| |||||||||||   |||| ||||||||| |    
T  26165324 aagaacattttatattcatgaataaaatttagtaaacttgtaacaaacataaacatgt-gcatttttatgattttattctcaggaatctacaaatataac 26165422  T
Q  147 gtgaaagaaacacaccc 163  Q
     ||||| ||||||||||    
T  26165423 atgaaacaaacacaccc 26165439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 52414189 - 52414225
Alignment:
Q  57 tatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||||||||||||||||||||||||||| ||||||    
T  52414189 tatatccagaaataaaatttaataaacttgcaacaaa 52414225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 36858504 - 36858445
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    ||||||||||| || |||||||||||| || |  |||||||||| |||||||||||||||    
T  36858504 tttttctattctcaggaacattttatacccgggcataaaatttagtaaacttgtaacaaa 36858445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 38414186 - 38414260
Alignment:
Q  67 aataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatata 144  Q
    ||||||||||| ||||||| | ||||| |||||||| | ||||| |||||||||||||| ||  ||||||||||||||    
T  38414186 aataaaatttagtaaacttattacaaacatagacatgt-atatttctatcattttattcccg--aatcaacaaatata 38414260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 44309708 - 44309775
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacat 102  Q
    ||||||||||| | ||||| ||||||| | || ||||||||||| ||| ||||||||||| ||||||||    
T  44309708 tttttctattctctagaacgttttata-ctaggaataaaatttagtaaccttgtaacaaacatagacat 44309775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 51968725 - 51968852
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||||| |||| |||||||  ||  |||||||||||  |||||||||||||| |||| |||   ||||| ||||| |||||||| |  ||||     
T  51968725 ttttctattcccaggaacgttttatactcaagaataaaatttagcaaacttgtaacaaacataggcat-gcatatttctatctttttattcccagaaatt 51968823  T
Q  135 aacaaatatatcgtgaaagaaacacaccc 163  Q
     || |||||| | ||||| ||||||||||    
T  51968824 tacgaatataacttgaaacaaacacaccc 51968852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 1007685 - 1007819
Alignment:
Q  28 gtaatatttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctc 127  Q
    |||| ||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||  ||||||||| |||||| |||||||||||||||    
T  1007685 gtaaaatttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacctagacatat-atattcatatcattttattctc 1007783  T
Q  128 gtaaatcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |  |||||||||||||| | ||||| ||||||||||    
T  1007784 gggaatcaacaaatataacttgaaacaaacacaccc 1007819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 1597471 - 1597342
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| || |||    
T  1597471 atttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccggaaa 1597373  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||| |||| | ||||| ||||||||||    
T  1597372 tcaacaattataacttgaaacaaacacaccc 1597342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 3572693 - 3572565
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  3572693 tttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 3572595  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  3572594 caacaattataacttgaaacaaacacaccc 3572565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 5518633 - 5518504
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| ||||| ||||||||||||||  |  ||    
T  5518633 atttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-atatttctatcattttattcctgggaa 5518535  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||| | ||||| ||||||||||    
T  5518534 tcaacaaatataacttgaaacaaacacaccc 5518504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 2430440 - 2430568
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  2430440 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 2430538  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  2430539 caacaattataacttgaaacaaacacaccc 2430568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 2632796 - 2632924
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| | |||||||| ||||||||| ||  |||    
T  2632796 tttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatat-acattcctattattttattcccgggaat 2632894  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  2632895 caacaattataacttgaaacaaacacaccc 2632924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 12190305 - 12190177
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||| | | |||||||||||||||||| || ||||    
T  12190305 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatgt-acattcctatcattttattcccgaaaat 12190207  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  12190206 caacaattataacttgaaacaaacacaccc 12190177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 39329552 - 39329680
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||||||||| | ||||| |||||||||||| ||  |||    
T  39329552 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatat-acattccaatcattttattcccgggaat 39329650  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  39329651 caacaattataacttgaaacaaacacaccc 39329680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 48916150 - 48916022
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| ||  |||||||||||| ||||||||||||||| |||| ||||| | ||| ||||||||||||||||   |||    
T  48916150 tttttctattcccatgaacattttatacccgaaaataaaatttagtaaacttgtaacaaacataggcatat-acatttctatcattttattctctggaat 48916052  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||||||| | ||||| ||||||||||    
T  48916051 caacaaatataacttgaaataaacacaccc 48916022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 8331958 - 8332086
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| |||||||| |||||| |||| ||||| | ||||| |||||||||||| || ||||    
T  8331958 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgcaacaaacataggcatat-acattccaatcattttattcccggaaat 8332056  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  8332057 caacaattataacttgaaacaaacacaccc 8332086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 37436748 - 37436640
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    |||||||||| ||  ||||||||||||||  |||||||||||| ||||||||||||||| |||  ||||| | |||||||||||||||||||||| ||||    
T  37436748 ttttctattctcagtaacattttatatccgaaaataaaatttagtaaacttgtaacaaacatatgcatat-acattcctatcattttattctcgtgaatc 37436650  T
Q  135 aacaaatata 144  Q
    ||||||||||    
T  37436649 aacaaatata 37436640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 46666652 - 46666780
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  46666652 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaat 46666750  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  46666751 caacaattataacttgaaacaaacacaccc 46666780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 47037401 - 47037529
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| ||||| |||||||||||||| ||  |||    
T  47037401 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-atatttctatcattttattcccgggaat 47037499  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  47037500 caacaattataacttgaaacaaacacaccc 47037529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 52630717 - 52630845
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| ||   ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||| |   |||    
T  52630717 tttttctattcccaggaacattttatacccgagaataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttattcccaggaat 52630815  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  52630816 caacaattataacttgaaacaaacacaccc 52630845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 13653795 - 13653901
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||  || |||||| ||||| ||||||||||||||||   |||    
T  13653795 tttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacgtatacatat-atatttctatcattttattctcaggaat 13653893  T
Q  134 caacaaat 141  Q
    ||||||||    
T  13653894 caacaaat 13653901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 32824866 - 32824992
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||| |||||| || ||||||||||||| ||||||||||||||| |||| ||||| | |||||||| ||||||||  || ||||    
T  32824866 tttttctattcccaggaacaatttatacccggaaataaaatttagtaaacttgtaacaaacataggcatat-acattcctattattttatttccggaaat 32824964  T
Q  134 caacaaatatatcgtgaaagaaacacac 161  Q
    |||||| |||| | ||||| ||||||||    
T  32824965 caacaattataacttgaaacaaacacac 32824992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 39930401 - 39930530
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  39930401 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 39930499  T
Q  134 caacaaatatatcgtgaaagaaacacacccc 164  Q
    |||||| |||| | ||||| |||||||||||    
T  39930500 caacaattataacttgaaacaaacacacccc 39930530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 9115781 - 9115909
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  9115781 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 9115879  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  9115880 caacaattataacttgaaacaaacacaccc 9115909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 14788667 - 14788795
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | |||| |||||| ||||||||||||||| |||||||||| | |||||||| ||||||||| ||  |||    
T  14788667 tttttctattcccaggaacattttatacccgggaatataatttagtaaacttgtaacaaacatagacatat-acattcctattattttattcccgggaat 14788765  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||| || |||| | ||||| ||||||||||    
T  14788766 caaaaattataacttgaaacaaacacaccc 14788795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 20260214 - 20260086
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| |   |||    
T  20260214 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccaggaat 20260116  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  20260115 caacaattataacttgaaacaaacacaccc 20260086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 35187400 - 35187528
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| ||| |||||| | ||| |||||||||||||| ||  |||    
T  35187400 tttttctattcccacgaacattttataccaaggaataaattttagtaaacttgtaacaaacataaacatat-acatttctatcattttattcccgggaat 35187498  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  35187499 caacaattataacttgaaaaaaacacaccc 35187528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 25789707 - 25789834
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  25789707 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 25789805  T
Q  134 caacaaatatatcgtgaaagaaacacacc 162  Q
    |||||| |||| | ||||| |||||||||    
T  25789806 caacaattataacttgaaacaaacacacc 25789834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 52186172 - 52186049
Alignment:
Q  36 tttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatca 135  Q
    ||||||||||||  ||||||||||   | | ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |   ||||||    
T  52186172 tttctattcccagaaacattttatcgtcgggaataaaatttagtaaacttgtaacaaatatagacatat-atatttctatcattttattataagaaatca 52186074  T
Q  136 acaaatatatcgtgaaagaaacaca 160  Q
    ||||||||| | ||||| |||||||    
T  52186073 acaaatataacttgaaacaaacaca 52186049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 30240954 - 30241075
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||| ||| |||||| ||| | ||||||||||||||||||||||||||| |||| ||||| ||||| |||||||||||||  |  ||||    
T  30240954 tttttctattcccaataactttttat-tccgggaataaaatttaataaacttgtaacaaacataggcatat-atatttctatcattttattaccaaaaat 30241051  T
Q  134 caacaaatatatcgtgaaagaaac 157  Q
    ||||||||||| | ||||| ||||    
T  30241052 caacaaatataacttgaaacaaac 30241075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 36361726 - 36361851
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| | |||||||||||| |  | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  36361726 tttttctattcctaggaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 36361824  T
Q  134 caacaaatatatcgtgaaagaaacaca 160  Q
    |||||| |||| | ||||| |||||||    
T  36361825 caacaattataacttgaaacaaacaca 36361851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 161
Target Start/End: Complemental strand, 9831999 - 9831872
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| ||||||||||||||  |  ||    
T  9831999 atttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcctgggaa 9831901  T
Q  133 tcaacaaatatatcgtgaaagaaacacac 161  Q
    ||||||| |||| | ||||| ||||||||    
T  9831900 tcaacaattataacttgaaacaaacacac 9831872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 6911455 - 6911565
Alignment:
Q  52 cattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaa 151  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| |||| ||||| | |||| ||||||||||||| ||  ||||||||| |||| | ||||    
T  6911455 cattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatat-acattcttatcattttattcccgagaatcaacaattataacttgaa 6911553  T
Q  152 agaaacacaccc 163  Q
    | ||||||||||    
T  6911554 acaaacacaccc 6911565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 50190893 - 50190767
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| | |||||||||||| || | ||||||||||| |||||||||||||||  ||| ||||| | ||||||| |||||||||  || ||||    
T  50190893 tttttctattccaaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacgtaggcatat-acattcctagcattttatttccggaaat 50190795  T
Q  134 caacaaatatatcgtgaaagaaacacac 161  Q
     ||||| |||||| ||||| ||||||||    
T  50190794 taacaattatatcttgaaacaaacacac 50190767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 4683502 - 4683413
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    |||||||||||| | ||||||||||||||| | ||||||||||| |||| |||||||||| |||| ||||| | |||||||||||||||||    
T  4683502 tttttctattcctaggaacattttatatccgggaataaaatttagtaaatttgtaacaaacataggcatat-acattcctatcattttatt 4683413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 29091610 - 29091738
Alignment:
Q  34 tttttctattcccaagaacattttata-tccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    |||||||||||| | ||||||||| || || |||| ||||||||| ||||||||||||||| |||||||||| |||||  |||||||||||| ||   ||    
T  29091610 tttttctattccgatgaacattttttactcgagaa-taaaatttagtaaacttgtaacaaacatagacatat-atatttttatcattttattatcaggaa 29091707  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||| | ||||| ||||||||||    
T  29091708 tcaacaaatataacttgaaacaaacacaccc 29091738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 11077998 - 11078051
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttg 86  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  11077998 atttttctattcccaaaaacatgttatatccagaaataaaatttaataaacttg 11078051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 11014569 - 11014479
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    ||||||||||||||  ||||||||||||||   |||| |||||| ||||||||||||||| |||||||| | ||||| ||||||||||||||    
T  11014569 tttttctattcccagaaacattttatatccgtgaatataatttattaaacttgtaacaaacatagacatgt-atatttctatcattttattc 11014479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 6978714 - 6978842
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||   |||||||||||   || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  6978714 tttttctattccctgaaacattttatacgaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 6978812  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  6978813 caacaattataacttgaaacaaacacaccc 6978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 20505084 - 20505008
Alignment:
Q  67 aataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatata 144  Q
    ||||||||||| ||||||||||||||| |||||||| | ||||| ||||||||||||||||  ||||| |||||||||    
T  20505084 aataaaatttagtaaacttgtaacaaacatagacatgt-atatttctatcattttattctcagaaatctacaaatata 20505008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 38964807 - 38964683
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||  ||||||||||||||| |||  ||||| | ||| |||||||||||||| ||  |||    
T  38964807 tttttctattcccaggaacattttataccaaggaataaatttttgtaaacttgtaacaaacataagcatat-acatttctatcattttattcccgggaat 38964709  T
Q  134 caacaaatatatcgtgaaagaaacac 159  Q
    |||||| |||| | ||||| ||||||    
T  38964708 caacaattataacttgaaacaaacac 38964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 46960572 - 46960641
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatat 104  Q
    ||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| |||||    
T  46960572 ttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat 46960641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 5806415 - 5806291
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||    || ||||| | ||| |||||||||||||| ||  |||    
T  5806415 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaa----aggcatat-acatttctatcattttattcccgggaat 5806321  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  5806320 caacaattataacttgaaacaaacacaccc 5806291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 13521265 - 13521349
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcatt 119  Q
    |||||||||||||||||||||||||||  |   ||||||||||| ||||||||||||||| | |||||| | ||||| ||||||||    
T  13521265 tttttctattcccaagaacattttatactcgtgaataaaatttagtaaacttgtaacaaacacagacatgt-atatttctatcatt 13521349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 19094072 - 19094121
Alignment:
Q  49 gaacattttatatccagaaataaaatttaataaacttgtaacaaatatag 98  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  19094072 gaacattttatatctagaaataaaatttaataaacttgcaacaaacatag 19094121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 49823009 - 49822917
Alignment:
Q  70 aaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||| ||||||||||||||| |||| ||||||  ||| |||||||||||||| ||  ||||||||| |||| | ||||| ||||||||||    
T  49823009 aaaatttagtaaacttgtaacaaacataggcatatac-atttctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccc 49822917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 13932009 - 13931942
Alignment:
Q  36 tttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatat 104  Q
    |||||||||| | |||||||||||| || ||||||||||||| ||||||||||||||| |||| |||||    
T  13932009 tttctattcc-aggaacattttatacccggaaataaaatttagtaaacttgtaacaaacataggcatat 13931942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 17475443 - 17475360
Alignment:
Q  40 tattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    |||||||| |||||||||||| || | ||||||||||| ||||||| ||||||| ||| |||||| ||||| ||||| |||||||    
T  17475443 tattcccaggaacattttatacccgggaataaaatttagtaaacttataacaaacataaacatat-atatttctatcgttttatt 17475360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 45772040 - 45772084
Alignment:
Q  49 gaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||| |||||||||||||||||||||||||||||||| |||||||    
T  45772040 gaacgttttatatccagaaataaaatttaataaacttataacaaa 45772084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 52699591 - 52699504
Alignment:
Q  37 ttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    ||||||||||| |||| ||||||| || | ||||||||| | ||||||||||||||| |||| ||| |  |||||||||||||||||||    
T  52699591 ttctattcccaggaacgttttatacccgggaataaaattcagtaaacttgtaacaaacataggcatgt-gtattcctatcattttattc 52699504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 9011257 - 9011200
Alignment:
Q  66 aaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    |||||||||||| ||||||||||| ||| |||||||| | |||||||||||||||||||    
T  9011257 aaataaaatttagtaaacttgtaataaacatagacatgt-atattcctatcattttatt 9011200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 51445207 - 51445083
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | |  |||||| |||| ||||||||||||||| ||||  |||| | |||  ||||||||||||| ||  |||    
T  51445207 tttttctattcccaggaacattttata-ctaagaataaattttagtaaacttgtaacaaacataggtatat-acatttatatcattttattcccgggaat 51445110  T
Q  134 caacaaatatatcgtgaaagaaacaca 160  Q
    |||||| |||| | ||||| |||||||    
T  51445109 caacaattataacttgaaacaaacaca 51445083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 19083233 - 19083105
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||| ||| ||||||||||||  |   ||||||||||| ||||||| ||||||| |||||||| | ||||| |||||||| ||||| |  ||||    
T  19083233 tttttctatttccaggaacattttatactcgtgaataaaatttagtaaacttataacaaacatagacatgt-atatttctatcattgtattcccaaaaat 19083135  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    | || ||||||   ||||| ||||||||||    
T  19083134 ctacgaatataatttgaaacaaacacaccc 19083105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 19131121 - 19130993
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||| ||| ||||||||||||  |   ||||||||||| ||||||| ||||||| |||||||| | ||||| |||||||| ||||| |  ||||    
T  19131121 tttttctatttccaggaacattttatactcgtgaataaaatttagtaaacttataacaaacatagacatgt-atatttctatcattgtattcccaaaaat 19131023  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    | || ||||||   ||||| ||||||||||    
T  19131022 ctacgaatataatttgaaacaaacacaccc 19130993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 37261792 - 37261883
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctc 127  Q
    ||||||||||||||| || ||||||| ||  ||| ||||||||||||||||||||||||| |||  ||| | ||||| |||| |||||||||||    
T  37261792 tttttctattcccaaaaagattttatgtcgggaa-taaaatttaataaacttgtaacaaacatatgcatgt-atatttctataattttattctc 37261883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 26384133 - 26384085
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaa 82  Q
    ||||||||||||  |||| |||||||||||| |||||||||||||||||    
T  26384133 tttttctattccttagaatattttatatccaaaaataaaatttaataaa 26384085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 24116448 - 24116338
Alignment:
Q  49 gaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgt 148  Q
    |||| ||||||| || | ||||||||||| ||||||||| ||||| ||| ||||   ||||| ||||| ||||||||||   |||| ||||||||| | |    
T  24116448 gaacgttttatacccgggaataaaatttagtaaacttgtgacaaacataaacat---atatttctatcgttttattctcaggaatctacaaatataacct 24116352  T
Q  149 gaaagaaacacacc 162  Q
    |||| |||||||||    
T  24116351 gaaacaaacacacc 24116338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 37726983 - 37727033
Alignment:
Q  49 gaacattttatatccagaaataaaatttaataaacttgtaacaaatataga 99  Q
    |||||||||||||  ||||||||||||||  |||||||||||||| |||||    
T  37726983 gaacattttatatagagaaataaaatttagaaaacttgtaacaaacataga 37727033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 52276879 - 52276926
Alignment:
Q  49 gaacattttatatccagaaataaaatttaataaacttgtaacaaatatag 98  Q
    |||||||||||||||   ||||||||||| ||||||||||||||||||||    
T  52276879 gaacattttatatccg--aataaaatttagtaaacttgtaacaaatatag 52276926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 1228005 - 1227948
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaa 92  Q
    ||||||||||| |  ||||||||||| |   |||||||||||||||||||||||||||    
T  1228005 ttttctattccaagaaacattttatacctgaaaataaaatttaataaacttgtaacaa 1227948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 28735109 - 28735170
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaata 95  Q
    |||| ||||||| || || ||||||||| || |||||||||||||||||| ||||| |||||    
T  28735109 ttttcctattcctaaaaatattttatattcaaaaataaaatttaataaacgtgtaaaaaata 28735170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 37336570 - 37336514
Alignment:
Q  36 tttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaa 92  Q
    ||||||||||||| || ||||||||||    ||||||||||| ||||||||||||||    
T  37336570 tttctattcccaataatattttatatctgagaataaaatttagtaaacttgtaacaa 37336514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 1988253 - 1988382
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| | ||||| |||||||||||||| |  |||    
T  1988253 atttttctattcccaagaacattttatatccggaaataaaatttaataaacttgtaacaaacataggcatgt-atatttctatcattttattcccagaaa 1988351  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||| | | ||| ||||||||||    
T  1988352 tcaacaaatataacttcaaacaaacacaccc 1988382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 37533895 - 37534023
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| | |||||||||||| |||| ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||| || ||||    
T  37533895 tttttctattccaaggaacattttatacccaggaataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttattcccggaaat 37533993  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  37533994 caacaattataacttgaaacaaacacaccc 37534023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 346473 - 346345
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  346473 tttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 346375  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  346374 caacaattataacttgaaacaaacacaccc 346345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 6171734 - 6171862
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||||||  |||    
T  6171734 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattctcgggaat 6171832  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  6171833 caacaattataacttgaaacaaacacaccc 6171862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 11071548 - 11071676
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| || ||||    
T  11071548 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccggaaat 11071646  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  11071647 caacaattataacttgaaacaaacacaccc 11071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 20426610 - 20426483
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||||| ||||||||||||||| |  |||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||||| ||  ||||    
T  20426610 ttttctattcccaggaacattttatatccggggataaaatttagtaaacttgtaacaaacataggcatataa-attcctatcattttattcccgggaatc 20426512  T
Q  135 aacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||||||   ||||| ||||||||||    
T  20426511 aacaaatataatttgaaacaaacacaccc 20426483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 2521618 - 2521746
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| |||| ||||||||||| ||||||||||||||| |||| ||||| | ||||| ||||||||||| |||  |||    
T  2521618 tttttctattcccaggaacattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattttcgggaat 2521716  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  2521717 caacaattataacttgaaacaaacacaccc 2521746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 159
Target Start/End: Complemental strand, 28311824 - 28311701
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||||| |||||||||||| || | ||||||||| | ||||||||||||||| |||| ||||| |||||||||||||||||||| ||  ||||    
T  28311824 ttttctattcccaggaacattttatacccgggaataaaattcagtaaacttgtaacaaacataggcatat-atattcctatcattttattcccgggaatc 28311726  T
Q  135 aacaaatatatcgtgaaagaaacac 159  Q
    |||||||||| | ||||| ||||||    
T  28311725 aacaaatataacttgaaacaaacac 28311701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 159
Target Start/End: Original strand, 37233373 - 37233496
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| || ||||||||||||||||| ||  ||||    
T  37233373 ttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-atgttcctatcattttattcccgggaatc 37233471  T
Q  135 aacaaatatatcgtgaaagaaacac 159  Q
    |||||||||| | ||||| ||||||    
T  37233472 aacaaatataacttgaaacaaacac 37233496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 2050809 - 2050935
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| ||||  |||| | |||||||||||||||||||||  |||    
T  2050809 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggtatat-acattcctatcattttattctcgggaat 2050907  T
Q  134 caacaaatatatcgtgaaagaaacacac 161  Q
    |||||| |||| | ||||| ||||||||    
T  2050908 caacaattataacttgaaacaaacacac 2050935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 37192465 - 37192591
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||||||||||||||||||| |||||||||| | ||| |||||||||||||| ||  |||    
T  37192465 tttttctattcccaggaacattttataccaaggaataaattttaataaacttgtaacaaacatagacatat-acatttctatcattttattcccgggaat 37192563  T
Q  134 caacaaatatatcgtgaaagaaacacac 161  Q
    |||||| |||| | ||||| ||||||||    
T  37192564 caacaattataacttgaaacaaacacac 37192591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 21737510 - 21737400
Alignment:
Q  52 cattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaa 151  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||| ||  ||||||||| |||| | ||||    
T  21737510 cattttatacccaggaataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttattcccgggaatcaacaattataacttgaa 21737412  T
Q  152 agaaacacaccc 163  Q
    | ||||||||||    
T  21737411 acaaacacaccc 21737400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 39995241 - 39995131
Alignment:
Q  52 cattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaa 151  Q
    |||||||||||||| ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  ||||||||| |||| | ||||    
T  39995241 cattttatatccaggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaatcaacaattataacttgaa 39995143  T
Q  152 agaaacacaccc 163  Q
    | ||||||||||    
T  39995142 acaaacacaccc 39995131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 14253465 - 14253574
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  |||||||||||  | | ||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||| ||  |||    
T  14253465 tttttctattcccataaacattttatactcgggaataaaatttagtaaacttgtaacaaacatagacatat-atatttctatcattttattcccgagaat 14253563  T
Q  134 caacaaatata 144  Q
    |||||||||||    
T  14253564 caacaaatata 14253574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 45409192 - 45409321
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| ||| |||||||| || | ||||||||||| ||||||||||| ||| |||| ||||| | |||||||||||||||| || |  ||    
T  45409192 atttttctattcccatgaatattttatacccggtaataaaatttagtaaacttgtaaaaaacataggcatat-acattcctatcattttatacttgggaa 45409290  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||| | ||||| ||||||||||    
T  45409291 tcaacaaatataacttgaaacaaacacaccc 45409321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 638536 - 638660
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||| |||||| | |||||||||||| || ||||||||||||| ||||| ||||||||| |||||||||| | |||||||||||||||||  || ||||    
T  638536 tttttatattcctaggaacattttatacccggaaataaaatttagtaaacctgtaacaaacatagacatat-acattcctatcattttatttccggaaat 638634  T
Q  134 caacaaatatatcgtgaaagaaacac 159  Q
    |||||| |||| | ||||| ||||||    
T  638635 caacaattataacttgaaacaaacac 638660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 5770238 - 5770110
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| |   |||    
T  5770238 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccaggaat 5770140  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||| ||||    
T  5770139 caacaattataacttgaaacaaacataccc 5770110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 14777626 - 14777498
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  14777626 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaat 14777528  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| ||||   ||||| ||||||||||    
T  14777527 caacaattataaattgaaacaaacacaccc 14777498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 17965926 - 17966054
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| | |||||||||||| || | ||||||||||  ||||||||||||||| |||||||||| | ||||| ||||||||||| |||  |||    
T  17965926 tttttctattcctaggaacattttatacccgggaataaaatttggtaaacttgtaacaaacatagacatat-acattccaatcattttattatcgggaat 17966024  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  17966025 caacaattataacttgaaacaaacacaccc 17966054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 34356828 - 34356700
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||| || |||| |||||||||| | ||| |||||||||||||| ||  |||    
T  34356828 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttataccaaacatagacatat-acatttctatcattttattcccgggaat 34356730  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  34356729 caacaattataacttgaaacaaacacaccc 34356700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 42674789 - 42674661
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||  || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  42674789 tttttctattcccaggaacattttatgcccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaat 42674691  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  42674690 caacaattataacttgaaacaaacacaccc 42674661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 165
Target Start/End: Complemental strand, 9733974 - 9733844
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||| |||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  9733974 tttttttattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 9733876  T
Q  134 caacaaatatatcgtgaaagaaacacacccct 165  Q
    |||||| |||| | ||||| ||||||||||||    
T  9733875 caacaattataacttgaaacaaacacacccct 9733844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 159
Target Start/End: Original strand, 14832752 - 14832877
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    |||||||||||||||||||||||||||| |  | ||||||||||| ||||||| ||||||| |||| ||||| ||||| ||||||||||||||     ||    
T  14832752 atttttctattcccaagaacattttatacctgggaataaaatttagtaaacttttaacaaacataggcatat-atatttctatcattttattcctaggaa 14832850  T
Q  133 tcaacaaatatatcgtgaaagaaacac 159  Q
    |||||||||||| | ||||| ||||||    
T  14832851 tcaacaaatataacttgaaacaaacac 14832877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 18713785 - 18713660
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||| |||| |||||||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| |||||  ||||||||||||  | | |||    
T  18713785 tttttttattaccaagaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-atatttatatcattttattaccatgaat 18713687  T
Q  134 caacaaatatatcgtgaaagaaacaca 160  Q
    ||||||||||| | ||||| |||||||    
T  18713686 caacaaatataacttgaaacaaacaca 18713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 27358092 - 27357963
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| ||| |||||||| |  | ||||||||||| ||||||||||||||| |||||||||| | || ||||||||||||| |  |  ||    
T  27358092 atttttctattcccatgaatattttatacctgggaataaaatttagtaaacttgtaacaaacatagacatat-acatccctatcattttatacctgggaa 27357994  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||| | ||||| ||||||||||    
T  27357993 tcaacaaatataacttgaaacaaacacaccc 27357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 4559502 - 4559630
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||  | ||||||||||||||| |||| ||||| | ||||| ||||||||||||| |  |||    
T  4559502 tttttctattcccaggaacattttatacccgggaataaaataaagtaaacttgtaacaaacataggcatat-acattccaatcattttattcttgggaat 4559600  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  4559601 caacaattataacttgaaacaaacacaccc 4559630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 40950987 - 40950859
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||| |||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||  ||||| ||||| |||||||||||||| ||  |||    
T  40950987 tttttgtattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataagcatat-atatttctatcattttattcccgagaat 40950889  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  40950888 caacaattataacttgaaacaaacacaccc 40950859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 41729258 - 41729130
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||||||||||||  | ||||||||||| ||||||||||||||| |||| |||||   |||||||||||||||||| ||  |||    
T  41729258 tttttctattcccaggaacattttatatctggcaataaaatttagtaaacttgtaacaaacataggcatat-ccattcctatcattttattcccgggaat 41729160  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
     || || |||| | ||||| ||||||||||    
T  41729159 aaaaaattataacttgaaacaaacacaccc 41729130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 45694132 - 45694259
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||||| |||| ||||||| || | ||||||||||| ||||||||||||||| |||||||| |  ||||||||||||||||||| |  |||||    
T  45694132 ttttctattcccatgaacgttttatacccgggaataaaatttagtaaacttgtaacaaacatagacatgt-gtattcctatcattttattcccagaaatc 45694230  T
Q  135 aacaaatatatcgtgaaagaaacacaccc 163  Q
     || |||||| | ||||| |||| |||||    
T  45694231 tacgaatataacttgaaacaaacgcaccc 45694259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 6571630 - 6571739
Alignment:
Q  34 tttttctattcccaagaacattttatatccaga-aataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||| |||||||  |||||||||||| || || ||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||  || |||    
T  6571630 tttttatattccccggaacattttata-cctgagaataaaatttagtaaacttgtaacaaacataggcatat-atattcctatcattttatttccggaaa 6571727  T
Q  133 tcaacaaatata 144  Q
    ||||||||||||    
T  6571728 tcaacaaatata 6571739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 26310210 - 26310321
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaa--atatagacatataatattcctatcattttattctcgtaa 131  Q
    |||||||||||||| |||||||||||| | || |||||| |||||||||||| ||||||  |||||||||||| | ||| |||||||||||||| ||  |    
T  26310210 tttttctattcccaggaacattttataccaaggaataaattttaataaacttctaacaaacatatagacatat-acatttctatcattttattcccggga 26310308  T
Q  132 atcaacaaatata 144  Q
    |||||||| ||||    
T  26310309 atcaacaattata 26310321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 41750472 - 41750599
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| ||||||||||||||     |||    
T  41750472 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcctaggaat 41750570  T
Q  134 caacaaatatatcgtgaaagaaacacacc 162  Q
    |||||| |||| | ||||| |||||||||    
T  41750571 caacaattataacttgaaacaaacacacc 41750599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 11763499 - 11763374
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  || ||||||| |||   ||||||||||| |||| || ||||||| |||||||||| ||||||||||||||| |||| || |||     
T  11763499 tttttctattcccagaaatattttatgtccgagaataaaatttagtaaatttataacaaacatagacatat-atattcctatcatttcattcccgaaaaa 11763401  T
Q  134 caacaaatatatcgtgaaagaaacacac 161  Q
    ||||||||||| | ||||| ||||||||    
T  11763400 caacaaatataacttgaaa-aaacacac 11763374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 25454968 - 25455095
Alignment:
Q  35 ttttctattcccaagaacattttata-tccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||| |||||||||||| || |||| | ||||||| ||||||||||||||| ||||||||||  ||||  ||| |||||||||||   |||    
T  25454968 ttttctattcccaggaacattttatactcgagaa-tgaaatttagtaaacttgtaacaaacatagacatat-gtatttttatgattttattctcaggaat 25455065  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    | ||||||||| | ||||| ||||||||||    
T  25455066 ctacaaatataacttgaaacaaacacaccc 25455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 23944106 - 23944165
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||||||||||| |||||||||||||||   ||||||||||| |||||||||||||||    
T  23944106 tttttctattcccaggaacattttatatccgagaataaaatttagtaaacttgtaacaaa 23944165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 40569964 - 40570027
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatag 98  Q
    ||||||||||||| |||||||||||| || | |||||||||||| |||||||||||||| ||||    
T  40569964 ttttctattcccaggaacattttatacccgggaataaaatttaacaaacttgtaacaaacatag 40570027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 516520 - 516463
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaaca 91  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||| |||| || |||||    
T  516520 tttttatattcccaaaaacattttatacccagaaataaaatttactaaaattataaca 516463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 5002964 - 5002837
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| |  | |||||||||||  ||||||||||||||||||  ||| | ||| | |||||||||||||||   ||||    
T  5002964 tttttctattcccagaaacattttata-cttggaataaaatttagcaaacttgtaacaaatatatgcatgt-atacttctatcattttattcttagaaat 5002867  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    | ||||||||| | ||||| |||| |||||    
T  5002866 ctacaaatataacttgaaacaaacgcaccc 5002837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 41298030 - 41297989
Alignment:
Q  50 aacattttatatccagaaataaaatttaataaacttgtaaca 91  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  41298030 aacattttatatccgggaataaaatttaataaacttgtaaca 41297989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 1723336 - 1723297
Alignment:
Q  54 ttttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  1723336 ttttatatccaagaataaaatttaataaacttgtaacaaa 1723297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 24499399 - 24499509
Alignment:
Q  48 agaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcg 147  Q
    ||||||||||||| |  | ||||||||||| ||||||| ||||||| ||||| ||   ||||| |||||||||||||    | |||||||||||||| |     
T  24499399 agaacattttataccatggaataaaatttagtaaacttataacaaacatagatat---atatttctatcattttatttctatgaatcaacaaatataact 24499495  T
Q  148 tgaaagaaacacac 161  Q
    ||||| ||||||||    
T  24499496 tgaaacaaacacac 24499509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 3902399 - 3902491
Alignment:
Q  34 tttttctattcccaagaacattttatatccaga-aataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctc 127  Q
    |||||||||||||| |||||||||| | || || ||||||||||| ||||||||||||||| |||    ||| ||||| ||||||||||||||||    
T  3902399 tttttctattcccaggaacattttaaa-cctgagaataaaatttagtaaacttgtaacaaacatatgtctat-atatttctatcattttattctc 3902491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 25724968 - 25725033
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaa-tttaataaacttgtaacaaatatag 98  Q
    ||||||||||||||  ||||||||||| |||| ||||||| |||||||||| || |||||| ||||    
T  25724968 tttttctattcccagaaacattttatacccagcaataaaattttaataaacctgcaacaaacatag 25725033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 13539611 - 13539679
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacat 102  Q
    |||||| |||||||  ||||||||||| |    |||||||||||||||| |||||||||| ||||||||    
T  13539611 tttttccattcccataaacattttatacctgcgaataaaatttaataaatttgtaacaaacatagacat 13539679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 6e-31; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 41684149 - 41684022
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    |||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||| |||||| ||||| ||||||| ||||||||   ||||    
T  41684149 ttttctattcccaagaacatcttatatccggaaataaaatttagtaaacttgtaacaaacataaacatat-atatttctatcatattattctcaggaatc 41684051  T
Q  135 aacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||| | ||||| ||||||||||    
T  41684050 aacaaatataacttgaaacaaacacaccc 41684022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 44565988 - 44566116
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| || | ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||  || ||||    
T  44565988 tttttctattcccagaaacattttatacccgggaataaaatttaataaacttgtaacaaacatagacatat-acattcctatcattttatttccggaaat 44566086  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  44566087 caacaattataacttgaaacaaacacaccc 44566116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 45045569 - 45045697
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  45045569 tttttctattcccaggaacattttatacccggaaataaaatttaataaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 45045667  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | | ||| ||||||||||    
T  45045668 caacaattataacttaaaacaaacacaccc 45045697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 25098012 - 25098140
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||| || | ||||| | |||||||||||||||||| || ||||    
T  25098012 tttttctattcccaggaacattttatacccggaaataaaatttagtaaacttgtaacaaacatgggcatat-acattcctatcattttattcccgaaaat 25098110  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||| || |||| | ||||| ||||||||||    
T  25098111 caaaaattataacttgaaacaaacacaccc 25098140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 35488317 - 35488189
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| || ||||    
T  35488317 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccggaaat 35488219  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  35488218 caacaattataacttgaaacaaacacaccc 35488189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 40212832 - 40212960
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  40212832 tttttctattcccaggaacattttataccccggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgcgaat 40212930  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  40212931 caacaattataacttgaaacaaacacaccc 40212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 10902778 - 10902689
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||| | ||||| |||||||||||||    
T  10902778 tttttctattcccaaaaacattttatatccaaaaataaaatttagtaaacttgtaacaaacatagacatgt-atatttctatcattttatt 10902689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 48341306 - 48341430
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  48341306 tttttctattcccaggaacattttata-ccgggaataaaatttaataaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 48341403  T
Q  134 caacaaatatatcgtgaaagaaacaca 160  Q
    |||||| |||| | ||||| |||||||    
T  48341404 caacaattataacttgaaacaaacaca 48341430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 48314065 - 48314193
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  |||||||||||||| | ||||||||||| ||||||| ||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  48314065 tttttctattcccagaaacattttatatccgggaataaaatttagtaaacttctaacaaacataggcatat-acattcctatcattttattcccgggaat 48314163  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  48314164 caacaattataacttgaaacaaacacaccc 48314193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 34 - 162
Target Start/End: Complemental strand, 45265176 - 45265049
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || ||||||||||||| ||||||| ||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  45265176 tttttctattcccaggaacattttatacccggaaataaaatttagtaaacttataacaaacataggcatat-acattccaatcattttattcccgagaat 45265078  T
Q  134 caacaaatatatcgtgaaagaaacacacc 162  Q
    |||||| |||| | ||||| |||||||||    
T  45265077 caacaattataacttgaaacaaacacacc 45265049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 18824087 - 18824217
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    |||||||||||||||| ||||||||||| || | ||||||||||| | ||||||||||||| |||| ||||||   || |||||||||||||| |  |||    
T  18824087 atttttctattcccaaaaacattttatacccgggaataaaatttagtgaacttgtaacaaacataggcatatatattttctatcattttattcccaaaaa 18824186  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||| | | ||||| ||||||||||    
T  18824187 tcaacaaatacaacttgaaacaaacacaccc 18824217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 9947118 - 9946990
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  9947118 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 9947020  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||| || |||| | | ||| ||||||||||    
T  9947019 caaaaattataactttaaacaaacacaccc 9946990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 11329936 - 11330064
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  11329936 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 11330034  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  11330035 caacaattataacttgaaacaaacacaccc 11330064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 27213983 - 27213855
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  27213983 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 27213885  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  27213884 caacaattataacttgaaacaaacacaccc 27213855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 28904314 - 28904186
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| | || |||||| |||| ||||||||||||||| |||||||||| | ||| |||||||||||||||||  |||    
T  28904314 tttttctattcccagaaacattttataccaaggaataaattttagtaaacttgtaacaaacatagacatat-acatttctatcattttattctcgggaat 28904216  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | | ||| ||||||||||    
T  28904215 caacaattataacttaaaacaaacacaccc 28904186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 45448885 - 45449009
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||||||| | | |||||||||||||||||| ||  |||    
T  45448885 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatct-acattcctatcattttattcccgagaat 45448983  T
Q  134 caacaaatatatcgtgaaagaaacac 159  Q
    ||| || |||| | ||||| ||||||    
T  45448984 caaaaattataacttgaaacaaacac 45449009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 33378803 - 33378913
Alignment:
Q  52 cattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaa 151  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  ||||||||| |||| | ||||    
T  33378803 cattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaatcaacaattataacttgaa 33378901  T
Q  152 agaaacacaccc 163  Q
    | ||||||||||    
T  33378902 acaaacacaccc 33378913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 38396494 - 38396385
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||| || |||| |||||||||| | |||||||||||||||||| ||  |||    
T  38396494 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttataccaaacatagacatat-acattcctatcattttattcccgggaat 38396396  T
Q  134 caacaaatata 144  Q
    |||||| ||||    
T  38396395 caacaattata 38396385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 27248236 - 27248364
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| |  | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  27248236 tttttctattcccagtaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaat 27248334  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  27248335 caacaattataacttgaaacaaacacaccc 27248364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 27419352 - 27419224
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  27419352 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 27419254  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    || ||| |||| | ||||| ||||||||||    
T  27419253 cagcaattataacttgaaacaaacacaccc 27419224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 39554126 - 39554254
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||| || |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  39554126 tttttctattctcaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 39554224  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  39554225 caacaattataacttgaaacaaacacaccc 39554254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 48160691 - 48160591
Alignment:
Q  62 ccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaaagaaacacac 161  Q
    |||| ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||| ||  ||||||||| |||| | ||||| ||||||||    
T  48160691 ccaggaataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacac 48160593  T
Q  162 cc 163  Q
    ||    
T  48160592 cc 48160591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 9814342 - 9814218
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||    | |||||| | |||||||||||||||||| ||  |||    
T  9814342 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaa----acacatat-acattcctatcattttattcccgggaat 9814248  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  9814247 caacaattataacttgaaacaaacacaccc 9814218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 34 - 162
Target Start/End: Complemental strand, 41632492 - 41632365
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| |||||||||||||| | || |||||| |||| ||||||||||| ||| |||| ||||| | ||| ||||||||||||||||   |||    
T  41632492 tttttctattcctaagaacattttataccaaggaataaattttagtaaacttgtaataaacataggcatat-acatttctatcattttattctcaggaat 41632394  T
Q  134 caacaaatatatcgtgaaagaaacacacc 162  Q
    |||||| |||| | ||||| |||||||||    
T  41632393 caacaattataacttgaaacaaacacacc 41632365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 25045746 - 25045618
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| ||||||||||||  | | ||||||||||| ||||||||||||||| |||  ||||| ||||||||||| ||||| || |   ||    
T  25045746 atttttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacatatgcatat-atattcctatcttttta-tccccagaa 25045649  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||| | ||||| ||||||||||    
T  25045648 tcaacaaatataacttgaaacaaacacaccc 25045618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 8419717 - 8419589
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| |  | ||||||||  | ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  8419717 tttttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaat 8419619  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  8419618 caacaattataacttgaaacaaacacaccc 8419589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 25924765 - 25924637
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||||||||||   || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  25924765 tttttctattcccaggaacattttatacaaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 25924667  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||| ||||    
T  25924666 caacaattataacttgaaacaaacataccc 25924637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 38544137 - 38544265
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| || | ||||||||||| ||||| ||||| ||| |||| ||||| | |||||||||||||||||  ||  |||    
T  38544137 tttttctattcccagaaacattttatacccgggaataaaatttagtaaacctgtaataaacataggcatat-acattcctatcattttatttccgggaat 38544235  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  38544236 caacaattataacttgaaacaaacacaccc 38544265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 43949188 - 43949315
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||| ||| ||||||||||||   || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  43949188 tttttctatttccaggaacattttatactaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 43949286  T
Q  134 caacaaatatatcgtgaaagaaacacacc 162  Q
    |||||| |||| | ||||| |||||||||    
T  43949287 caacaattataacttgaaacaaacacacc 43949315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 11000644 - 11000774
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagac-atataatattcctatcattttattctcgtaa 131  Q
    ||||||||||||||||||| |||||||| || | ||||||||||| ||||||||||||||| |||| | |||| |||||  ||||||||||||  |   |    
T  11000644 atttttctattcccaagaatattttatacccgggaataaaatttagtaaacttgtaacaaacataggctatat-atatttatatcattttatttccagga 11000742  T
Q  132 atcaacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||| ||||| | ||||| ||||||||||    
T  11000743 atcaacatatataacttgaaacaaacacaccc 11000774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 16825482 - 16825392
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| ||||||||||||||    
T  16825482 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattc 16825392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 30871131 - 30871223
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctc 127  Q
    ||||||||||||||  ||||||| ||||||  |||||||| ||||||||||||||||||| ||| | || | ||||| ||||||||||||||||    
T  30871131 tttttctattcccacaaacatttgatatccgaaaataaaacttaataaacttgtaacaaacataaaaatgt-atatttctatcattttattctc 30871223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 45723091 - 45723163
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatata 105  Q
    ||||||||||||||||||||||||||||  | | ||||||||||| ||||||||| ||||| |||| ||||||    
T  45723091 atttttctattcccaagaacattttatactcgggaataaaatttagtaaacttgtgacaaacataggcatata 45723163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 30686120 - 30686061
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||||||||||| |||||||||||| || | ||||||||||| |||||||||||||||    
T  30686120 tttttctattcccatgaacattttatacccgggaataaaatttagtaaacttgtaacaaa 30686061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 34930595 - 34930504
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaac-aaatatagacatataatattcctatcattttattc 125  Q
    |||||||||||||| |||||||||||| | || |||||| |||| |||||||||||| ||| |||| ||||| | ||| ||||||||||||||    
T  34930595 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaaacataggcatat-acatttctatcattttattc 34930504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 45723221 - 45723277
Alignment:
Q  106 atattcctatcattttattctcgtaaatcaacaaatatatcgtgaaagaaacacacc 162  Q
    |||||||||||||||||||||||  |||||||||||||| | ||||| |||||||||    
T  45723221 atattcctatcattttattctcgggaatcaacaaatataacttgaaacaaacacacc 45723277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 44820197 - 44820323
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||| |||| | |||||||||||| | || |||||| |||||||||| ||||||||| | | ||| || | ||| ||||||||||||||  | ||||    
T  44820197 tttttctgttccgaggaacattttataccaaggaataaattttaataaacatgtaacaaacacatacaaat-acatttctatcattttattcctgaaaat 44820295  T
Q  134 caacaaatatatcgtgaaagaaacacac 161  Q
    |||||| |||| | ||||| ||||||||    
T  44820296 caacaattataacttgaaacaaacacac 44820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 6656598 - 6656476
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    |||||||||||||  |||||||||||  |  ||||||| |||| ||||||||||||||| |||| ||||| |||||| ||||| ||||||  |  |||||    
T  6656598 ttttctattcccagaaacattttatactcgaaaataaa-tttagtaaacttgtaacaaacataggcatat-atattcatatca-tttatttccaaaaatc 6656502  T
Q  135 aacaaatatatcgtgaaagaaacaca 160  Q
    |||||||||| | ||||| |||||||    
T  6656501 aacaaatataacttgaaacaaacaca 6656476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 38528832 - 38528776
Alignment:
Q  37 ttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||||||||| ||||||||||| |||  |||||||| || |||||||||||||||    
T  38528832 ttctattcccaataacattttatacccaagaataaaatctagtaaacttgtaacaaa 38528776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 37534231 - 37534172
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    ||||||||||||||  || |||||||| || ||||||||| ||| |||||||||||||||    
T  37534231 tttttctattcccataaatattttatacccggaaataaaagttagtaaacttgtaacaaa 37534172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 6656315 - 6656226
Alignment:
Q  71 aaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaaagaaacacac 161  Q
    ||||||| ||||||| ||||||| ||||  ||||| ||||| ||||||||||||  |  ||||||||||||||| | ||||| ||||||||    
T  6656315 aaatttagtaaacttataacaaacataggtatata-tattcatatcattttatttccaaaaatcaacaaatataacttgaaacaaacacac 6656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 43446010 - 43445940
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatata 105  Q
    |||| ||||| || ||||||||||||| |   ||||||||||| ||||||| |||||||||||| ||||||    
T  43446010 ttttttattctcatgaacattttatattcgagaataaaatttagtaaacttataacaaatataggcatata 43445940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 6174054 - 6174083
Alignment:
Q  1 attctcttataaataggaccggaagaagta 30  Q
    ||||||||||||||||||||||||||||||    
T  6174054 attctcttataaataggaccggaagaagta 6174083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 22156307 - 22156242
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatataga 99  Q
    |||||||||||||| |||| |||||||  | | | ||||||||| |||||||||||||||| ||||    
T  22156307 tttttctattcccaggaacgttttatacgcgggattaaaatttattaaacttgtaacaaatctaga 22156242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 22212222 - 22212157
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatataga 99  Q
    |||||||||||||| |||| |||||||  | | | ||||||||| |||||||||||||||| ||||    
T  22212222 tttttctattcccaggaacgttttatacgcgggattaaaatttattaaacttgtaacaaatctaga 22212157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 45440849 - 45440909
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||| |||||| | ||||||||||||  | | ||||||||||| |||||||||||||||    
T  45440849 atttttatattccgaggaacattttatactcgggaataaaatttagtaaacttgtaacaaa 45440909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 1554482 - 1554354
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||| ||  |||    
T  1554482 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttattcccgggaat 1554384  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  1554383 caacaattataacttgaaacaaacacaccc 1554354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 16313635 - 16313507
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| ||||  |||| | |||||||||||||||||| || ||||    
T  16313635 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggtatat-acattcctatcattttattcccggaaat 16313537  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  16313536 caacaattataacttgaaacaaacacaccc 16313507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 32661061 - 32660933
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||||| |   |||    
T  32661061 tttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatat-acattcctatcattttattcccaggaat 32660963  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  32660962 caacaattataacttgaaacaaacacaccc 32660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 37392674 - 37392546
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  37392674 tttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 37392576  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||| ||||||    
T  37392575 caacaattataacttgaaacaaatacaccc 37392546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 18726747 - 18726618
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| |  | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  18726747 tttttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 18726649  T
Q  134 caacaaatatatcgtgaaagaaacacacccc 164  Q
    |||||| |||| | ||||| |||||||||||    
T  18726648 caacaattataacttgaaacaaacacacccc 18726618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 26602065 - 26601957
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  26602065 tttttctattcccaagaacattttata-ccaggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 26601968  T
Q  134 caacaaatata 144  Q
    |||||| ||||    
T  26601967 caacaattata 26601957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 35394333 - 35394461
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||| |  ||||||||||||| || | ||||||||||| ||||||||||||||| |||||||||| ||||| || ||||||||||||||| |||    
T  35394333 tttttctattacgtagaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatat-atatttctttcattttattctcgtgaat 35394431  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||| ||||||| | ||||| ||||| ||||    
T  35394432 caataaatataacttgaaacaaacaaaccc 35394461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 35818552 - 35818424
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  35818552 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaat 35818454  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  35818453 caacaattataacttgaaacaaacacaccc 35818424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 38132865 - 38132737
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||||||||| | ||| |||||||||||||| ||  |||    
T  38132865 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatagacatat-acatttctatcattttattcccgagaat 38132767  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  38132766 caacaattataacttgaaacaaacacaccc 38132737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 38364024 - 38364152
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  38364024 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaat 38364122  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  38364123 caacaattataacttgaaacaaacacaccc 38364152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 34 - 162
Target Start/End: Complemental strand, 33444752 - 33444627
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||||||||||||||| || | ||||||||||| | ||||||||||||| |||||||||| |||||  |||||||||||||||   |||    
T  33444752 tttttctattcccaagaacattttata-ccgggaataaaatttagt-aacttgtaacaaacatagacatat-atatttttatcattttattctcaggaat 33444656  T
Q  134 caacaaatatatcgtgaaagaaacacacc 162  Q
    ||||||||||| | ||||| |||||||||    
T  33444655 caacaaatataacttgaaacaaacacacc 33444627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 3049952 - 3050074
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  3049952 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 3050050  T
Q  134 caacaaatatatcgtgaaagaaac 157  Q
    |||||| |||| | ||||| ||||    
T  3050051 caacaattataacttgaaacaaac 3050074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 29421618 - 29421508
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    |||||||||||||||  || |||||||| ||   ||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||| | ||    
T  29421618 atttttctattcccagaaatattttatacccgagaataaaatttaataaacttgtaacaaacataaacatat-atatttctatcattttattctcatgaa 29421520  T
Q  133 tcaacaaatata 144  Q
    ||||||||||||    
T  29421519 tcaacaaatata 29421508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 7317332 - 7317444
Alignment:
Q  49 gaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgt 148  Q
    ||||| ||||||||| ||| ||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||| | | ||||||||||||||| | |    
T  7317332 gaacactttatatccggaa-taaaatttagtaaacttgtaacaaacataggcatata-tattcctatcattttatttttgaaaatcaacaaatataactt 7317429  T
Q  149 gaaagaaacacaccc 163  Q
    |||| ||||||||||    
T  7317430 gaaacaaacacaccc 7317444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 25837853 - 25837982
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| |||||||||||| || | ||||||||||  ||||||||||||||| |||| ||| | | |||||||||||||||||| ||  ||    
T  25837853 atttttctattcccaggaacattttatacccgggaataaaattttgtaaacttgtaacaaacataggcatgt-acattcctatcattttattcccgggaa 25837951  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||| |||| | ||||| ||||||||||    
T  25837952 tcaacaattataacttgaaacaaacacaccc 25837982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 12710588 - 12710716
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  12710588 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 12710686  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  12710687 caacaattataacttgaaacaaacacaccc 12710716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 165
Target Start/End: Original strand, 18298055 - 18298185
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| ||||  |||| | |||||||||||||||||| ||  |||    
T  18298055 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggtatat-acattcctatcattttattcccgagaat 18298153  T
Q  134 caacaaatatatcgtgaaagaaacacacccct 165  Q
    ||| || |||| | ||||| ||||| ||||||    
T  18298154 caaaaattataacttgaaacaaacaaacccct 18298185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 10896345 - 10896217
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| |||| |||||||||| |||| ||||| | ||| ||||||||||||||  |  |||    
T  10896345 tttttctattcccaggaacattttataccaaggaataaattttagtaaatttgtaacaaacataggcatat-acatttctatcattttattcctgggaat 10896247  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  10896246 caacaattataacttgaaacaaacacaccc 10896217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 161
Target Start/End: Complemental strand, 21137254 - 21137134
Alignment:
Q  40 tattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaa 139  Q
    ||||||||  ||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| ||||| |||| |||||||||||   |||||||||    
T  21137254 tattcccacaaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-atatttctattattttattctcaggaatcaacaa 21137156  T
Q  140 atatatcgtgaaagaaacacac 161  Q
    ||||| | | ||| ||||||||    
T  21137155 atataacttcaaacaaacacac 21137134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 26062087 - 26062215
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| | |||||||||| | || |||||| |||| ||||||||||||||| ||||  |||| | ||| |||||||||||||| ||  |||    
T  26062087 tttttctattcccagggacattttataccaaggaataaattttagtaaacttgtaacaaacataggaatat-acatttctatcattttattcccgagaat 26062185  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  26062186 caacaattataacttgaaacaaacacaccc 26062215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 41228842 - 41228714
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| | |||||||||||| || | ||||||||||| |||||||||||||||  ||| ||||| | ||||||| |||||||||| ||  |||    
T  41228842 tttttctattccaaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacgtaggcatat-acattcctaccattttattcccgggaat 41228744  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
     ||||| |||| | ||||| ||||||||||    
T  41228743 taacaattataacttgaaacaaacacaccc 41228714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 162
Target Start/End: Original strand, 42755810 - 42755937
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||||||||||   || |||||| |||| |||||||||||| || |||| ||||| | ||| |||||||||||||| |   |||    
T  42755810 tttttctattcccaggaacattttatacaaaggaataaattttagtaaacttgtaactaacataggcatat-acatttctatcattttattcccaggaat 42755908  T
Q  134 caacaaatatatcgtgaaagaaacacacc 162  Q
    |||||| |||| | ||||| |||||||||    
T  42755909 caacaattataacttgaaacaaacacacc 42755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 31117658 - 31117587
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatata 105  Q
    |||||||||||  ||||||||||||||| | |||||||||||||||||| | |||||||| ||||| |||||    
T  31117658 tttttctattctgaagaacattttatattcggaaataaaatttaataaaatcgtaacaaacatagatatata 31117587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 165
Target Start/End: Complemental strand, 40197204 - 40197074
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||||| |  |||||| |||| ||||||| ||||||| ||| |||||| | ||| |||||||||||||  ||  |||    
T  40197204 tttttctattcccagaaacattttatatcaaagaataaattttagtaaacttataacaaacataaacatat-acatttctatcattttatttccgggaat 40197106  T
Q  134 caacaaatatatcgtgaaagaaacacacccct 165  Q
    |||||| |||| | ||||| ||||| ||||||    
T  40197105 caacaattataacttgaaacaaacatacccct 40197074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 7931182 - 7931306
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||| || |||||||||||| | || |||||| |||| ||||||| ||||||| ||| |||||| | ||| |||||||||||||| |   |||    
T  7931182 tttttctattctcaggaacattttataccaaggaataaattttagtaaacttataacaaacatatacatat-acatttctatcattttattcccaggaat 7931280  T
Q  134 caacaaatatatcgtgaaagaaacac 159  Q
    |||||| |||| | ||||| ||||||    
T  7931281 caacaattataacttgaaacaaacac 7931306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 15226908 - 15226977
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatat 104  Q
    |||||||||| || ||| |||||||| || ||||||||||||| ||||||||||||||| ||| ||||||    
T  15226908 ttttctattcgcaggaatattttatacccggaaataaaatttagtaaacttgtaacaaacataaacatat 15226977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 5749716 - 5749657
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||||||||| ||||||||||| ||||||| |||| || ||||||||||||||||||||    
T  5749716 atttttctattctcaagaacattt-atatccataaattaagtttaataaacttgtaacaaa 5749657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 12650079 - 12650137
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    ||||||||| ||| ||| ||||||||  ||||||||||||||||||| |||||||||||    
T  12650079 ttttctatttccatgaatattttatacacagaaataaaatttaataatcttgtaacaaa 12650137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 25899577 - 25899642
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagaca 101  Q
    ||||||||||| | |||||||| ||| || |||||||||||||||||||||| |||||| |||||||    
T  25899577 ttttctattccgaggaacattt-atacccggaaataaaatttaataaacttgcaacaaacatagaca 25899642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 41432685 - 41432773
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    |||||||||||||  ||| ||||||| || | ||||||||||| ||||||||||||||| ||| |||| |  |||||||||||||||||||    
T  41432685 ttttctattcccataaacgttttata-ccgggaataaaatttagtaaacttgtaacaaacataaacatgt-gtattcctatcattttattc 41432773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 43872088 - 43872030
Alignment:
Q  40 tattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatag 98  Q
    |||||||| |||||||||||| || | |||||||||||| |||||||||||||| ||||    
T  43872088 tattcccaggaacattttatacccgggaataaaatttaacaaacttgtaacaaacatag 43872030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 38437398 - 38437486
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    |||||||||| || |||| ||||||| ||  |||||||||||  ||||||||||||||| ||||| ||||  |||||||||| |||||||    
T  38437398 ttttctattctcaggaacgttttatacccgaaaataaaattttgtaaacttgtaacaaacatagatatat-gtattcctatcgttttatt 38437486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 14764059 - 14763969
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    ||||||||||| || |||||||||||| ||   ||||||||||| |||||||| |||||| |||  ||| | ||||| ||||||||||||||    
T  14764059 tttttctattctcatgaacattttatacccgtgaataaaatttagtaaacttgaaacaaacatatgcatgt-atatttctatcattttattc 14763969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 161
Target Start/End: Complemental strand, 5020622 - 5020492
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcct---atcattttattctcgt 129  Q
    |||||||||||| ||  ||||||||||| ||   | |||| |||| ||||||||||| ||| |||  |||||| |||||||   |||||||||||| | |    
T  5020622 atttttctattcacagaaacattttatacccgagagtaaactttagtaaacttgtaagaaacatatgcatata-tattcctcctatcattttattcccat 5020524  T
Q  130 aaatcaacaaatatatcgtgaaagaaacacac 161  Q
     |||||||||||||| | ||||| ||||||||    
T  5020523 gaatcaacaaatataacttgaaacaaacacac 5020492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 6805750 - 6805698
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgt 87  Q
    |||||||||||||||||||| |||||  | | ||||||||||| |||||||||    
T  6805750 ttttctattcccaagaacatattatactcgggaataaaatttagtaaacttgt 6805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 4e-29; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 14170956 - 14171084
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  14170956 tttttctattcccaggaacattttatatccaggaataaaatttagtaaacttgtaacaaacataggcatat-agattcctatcattttattcccgggaat 14171054  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||| || |||| | ||||| ||||||||||    
T  14171055 caaaaattataacttgaaacaaacacaccc 14171084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 6705894 - 6705765
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| |||||||||||| | || ||||||||||| ||||||||||||||| |||||||||| ||||| ||| ||||||||||   | ||    
T  6705894 atttttctattcccaggaacattttatacctaggaataaaatttagtaaacttgtaacaaacatagacatat-atatttctaccattttattccaatgaa 6705796  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||| | ||||| ||||||||||    
T  6705795 tcaacaaatataacttgaaacaaacacaccc 6705765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 2657643 - 2657771
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| ||||  |||| | |||||||||||||||||| ||  |||    
T  2657643 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggtatat-acattcctatcattttattcccgggaat 2657741  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  2657742 caacaattataacttgaaacaaacacaccc 2657771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 7344211 - 7344113
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| |  | ||||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||    
T  7344211 tttttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaacaaatataggcatat-acattcctatcattttattctcggaaat 7344113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 7053680 - 7053570
Alignment:
Q  52 cattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaa 151  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  ||||||||| |||| | ||||    
T  7053680 cattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaatcaacaattataacttgaa 7053582  T
Q  152 agaaacacaccc 163  Q
    | ||||||||||    
T  7053581 acaaacacaccc 7053570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 16968868 - 16968977
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| ||   ||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||||||||   |||    
T  16968868 tttttctattcccagaaacattttatacccgagaataaaatttagtaaacttgtaacaaacatagacatat-agattcctatcattttattctcaggaat 16968966  T
Q  134 caacaaatata 144  Q
    |||||| ||||    
T  16968967 caacaattata 16968977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 33 - 163
Target Start/End: Original strand, 1316960 - 1317089
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||||||| |||||||||||| |  | ||||||||  | ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  ||    
T  1316960 atttttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaa 1317058  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||| |||| | ||||| ||||||||||    
T  1317059 tcaacaattataacttgaaacaaacacaccc 1317089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 21008152 - 21008043
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||||||||||| || | | | ||||||||||| ||||| ||||||||||| || ||||| |||||  ||||||||||||| |  ||||    
T  21008152 tttttctattcccaagaacatttcatgttcgggaataaaatttagtaaacctgtaacaaatagaggcatat-atatttttatcattttattcccagaaat 21008054  T
Q  134 caacaaatata 144  Q
    |||||||||||    
T  21008053 caacaaatata 21008043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 160
Target Start/End: Original strand, 18897864 - 18897989
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| | || |||||| |||||||||||||||||||| |||| ||||| | ||| |||||| ||||||  ||  |||    
T  18897864 tttttctattcccagaaacattttataccaaggaataaattttaataaacttgtaacaaacataggcatat-acatttctatcactttatttccgggaat 18897962  T
Q  134 caacaaatatatcgtgaaagaaacaca 160  Q
    |||||| |||| | ||||| |||||||    
T  18897963 caacaattataacttgaaacaaacaca 18897989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 345958 - 345870
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    ||||||||||| || ||| ||||||||||   ||||||||||| ||||||||||||||| |||||||| |  ||||||||||||||||||    
T  345958 ttttctattcctaaaaacgttttatatccgagaataaaatttagtaaacttgtaacaaacatagacatgt-gtattcctatcattttatt 345870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 9760497 - 9760406
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctc 127  Q
    |||||||||| || ||||||||||||||| ||||||||||||| ||||||| ||||||| |||| ||| | ||| | | ||||||||||||||    
T  9760497 ttttctattctcatgaacattttatatcctgaaataaaatttagtaaacttataacaaaaataggcatgt-ataattcgatcattttattctc 9760406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 8029316 - 8029404
Alignment:
Q  74 tttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||| ||||||||||||||| |||| ||||||  ||| |||||||||||||| ||  ||||||||| |||| | ||||| ||||||||||    
T  8029316 tttagtaaacttgtaacaaacataggcatatac-atttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 8029404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 10849912 - 10849847
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatag 98  Q
    ||||||||||||||| |||||||||| | |||| || |||| ||| |||||||||||| |||||||    
T  10849912 atttttctattcccaggaacattttacacccaggaagaaaagttactaaacttgtaactaatatag 10849847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 14781746 - 14781689
Alignment:
Q  36 tttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||||||||| || ||||||||| | || ||||||||||| |||||||||||||||    
T  14781746 tttctattcccatgagcattttatacctaggaataaaatttagtaaacttgtaacaaa 14781689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 9644724 - 9644688
Alignment:
Q  2 ttctcttataaataggaccggaagaagtaatattttt 38  Q
    |||||||||||||||||||||| | ||||||||||||    
T  9644724 ttctcttataaataggaccggaggtagtaatattttt 9644688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 9650741 - 9650705
Alignment:
Q  2 ttctcttataaataggaccggaagaagtaatattttt 38  Q
    |||||||||||||||||||||| | ||||||||||||    
T  9650741 ttctcttataaataggaccggaggtagtaatattttt 9650705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 82
Target Start/End: Original strand, 30588040 - 30588068
Alignment:
Q  54 ttttatatccagaaataaaatttaataaa 82  Q
    |||||||||||||||||||||||||||||    
T  30588040 ttttatatccagaaataaaatttaataaa 30588068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 4765688 - 4765560
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  4765688 tttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 4765590  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  4765589 caacaattataacttgaaacaaacacaccc 4765560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 19065633 - 19065505
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  19065633 tttttctattcccaggaacattttatacccggaaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 19065535  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  19065534 caacaattataacttgaaacaaacacaccc 19065505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 27480953 - 27481061
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||||| ||||||||||||  ||| ||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||||  |||||    
T  27480953 ttttctattcccatgaacattttatacacaggaataaaatttagtaaacttgtaacaaacatagacata-catattcctatcattttattctcaaaaatc 27481051  T
Q  135 aacaaatata 144  Q
    ||||||||||    
T  27481052 aacaaatata 27481061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 6930582 - 6930714
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatata---atattcctatcattttattctcgt 129  Q
    |||||||||||||||| || |||||||||||  |||||||||||| ||||||||||||||| ||| |||||||   ||||| ||||||||||||||||      
T  6930582 atttttctattcccaataatattttatatccgaaaataaaatttagtaaacttgtaacaaacataaacatatatatatatttctatcattttattctcag 6930681  T
Q  130 aaatcaacaaatatatcgtgaaagaaacacacc 162  Q
     |||||||||||||| | ||||| |||||||||    
T  6930682 gaatcaacaaatataacttgaaataaacacacc 6930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 11855783 - 11855658
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||||||||||||| | ||||||||||| ||||||||||||||| |||| ||||| | ||||||||||||||||||||   |||    
T  11855783 tttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattctcaggaat 11855685  T
Q  134 caacaaatatatcgtgaaagaaacaca 160  Q
    |||||| |||| | ||||| |||||||    
T  11855684 caacaattataacttgaaacaaacaca 11855658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 12970658 - 12970530
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  12970658 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 12970560  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  12970559 caacaattataacttgaaacaaacacaccc 12970530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 8406837 - 8406959
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | |||||||||||  ||||||||||||||||||| ||| | | ||||||||||||||||||||| ||||    
T  8406837 tttttctattcccaggaacattttatacccgggaataaaatttagcaaacttgtaacaaatataggcatgt-acattcctatcattttattctcgaaaat 8406935  T
Q  134 caacaaatatatcgtgaaagaaac 157  Q
    |||||| |||| | ||||| ||||    
T  8406936 caacaattataacttgaaacaaac 8406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 8646519 - 8646415
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||| ||  |||    
T  8646519 tttttctattcccaggaacattttataaccgggaataaaatttagtaaacttgtaacaaacatagacatat-acattcctatcattttattcccgggaat 8646421  T
Q  134 caacaa 139  Q
    ||||||    
T  8646420 caacaa 8646415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 29543143 - 29543015
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||||||||| | ||||| |||||||||||| |   |||    
T  29543143 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatat-acattccaatcattttattcccaggaat 29543045  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  29543044 caacaattataacttgaaacaaacacaccc 29543015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 36703817 - 36703945
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||||||||| | ||| |||||||||||||| ||  |||    
T  36703817 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatagacatat-acatttctatcattttattcccgataat 36703915  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  36703916 caacaattataacttgaaacaaacacaccc 36703945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 555834 - 555706
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||  |||||||||||| | || |||||| |||| ||||||||||||||| |||||||||| | ||| |||||||||||||| ||  |||    
T  555834 tttttctattccctggaacattttataccaaggaataaattttagtaaacttgtaacaaacatagacatat-acatttctatcattttattcccgggaat 555736  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  555735 caacaattataacttgaaacaaacacaccc 555706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 14206949 - 14206821
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| || ||||    
T  14206949 tttttctattcccagaaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccggaaat 14206851  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  14206850 caacaattataacttgaaacaaacacaccc 14206821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 26637144 - 26637045
Alignment:
Q  61 tccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaaagaaacaca 160  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| ||| | |||||||||||||| | | |||||||||||||| | ||||| |||||||    
T  26637144 tccaggaataaaatttagtaaacttgtaacaaatatagacatat-ataattctatcattttattcccattaatcaacaaatataacttgaaacaaacaca 26637046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 159
Target Start/End: Original strand, 6091657 - 6091782
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    |||||||||||||||||||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | |||  ||||||||||||| ||  ||    
T  6091657 atttttctattcccaagaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttatatcattttattcccgggaa 6091755  T
Q  133 tcaacaaatatatcgtgaaagaaacac 159  Q
    ||||||| |||| | ||||| ||||||    
T  6091756 tcaacaattataacttgaaacaaacac 6091782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 18412152 - 18412280
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| ||   ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| |   |||    
T  18412152 tttttctattcccaggaacattttatacccgagaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccaggaat 18412250  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    ||| || |||| | ||||| ||||||||||    
T  18412251 caataattataacttgaaacaaacacaccc 18412280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 32535880 - 32535970
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    ||||||||||||||| ||||||||||| | ||||||||| |||| ||||||||||||||| ||| |||||| | ||| ||||||||||||||    
T  32535880 tttttctattcccaataacattttataccaagaaataaattttagtaaacttgtaacaaacataaacatat-acatttctatcattttattc 32535970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 42012307 - 42012179
Alignment:
Q  34 tttttctattcccaagaacattttata-tccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    |||||||||||| | |||||||||||| || |||| ||||||||| |||| |||||||||| ||||||||||  |||| |||||||||||||| ||  ||    
T  42012307 tttttctattcctaggaacattttatactcgagaa-taaaatttagtaaatttgtaacaaacatagacatat-gtatttctatcattttattcccgagaa 42012210  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||| | | ||| ||||||||||    
T  42012209 tcaacaaatatagcttcaaacaaacacaccc 42012179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 22936040 - 22935912
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| |  | ||||||||  | ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  22936040 tttttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaat 22935942  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  22935941 caacaattataacttgaaacaaacacaccc 22935912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 28602499 - 28602626
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||| ||  ||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| ||  |||    
T  28602499 tttttctattctcagaaacattttata-ccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccgggaat 28602596  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  28602597 caacaattataacttgaaacaaacacaccc 28602626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 27481297 - 27481428
Alignment:
Q  30 aatatttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgt 129  Q
    ||||||||| ||||| || ||| |||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||  |      
T  27481297 aatattttt-tattctcaggaatattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttatttccaa 27481394  T
Q  130 aaatcaacaaatatatcgtgaaagaaacacaccc 163  Q
    ||||||| || |||| | ||||| ||||||||||    
T  27481395 aaatcaaaaattataacttgaaacaaacacaccc 27481428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 30899500 - 30899555
Alignment:
Q  36 tttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaaca 91  Q
    |||||||||||||||| ||||||||||||| |||||||||||  ||||||||||||    
T  30899500 tttctattcccaagaatattttatatccaggaataaaatttagaaaacttgtaaca 30899555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 35348652 - 35348586
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacat 102  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||| ||||||||||||||| ||||||||    
T  35348652 ttttctattcccaaaaacattttataccca-aaatacaatttagtaaacttgtaacaaacatagacat 35348586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 28023776 - 28023844
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacat 102  Q
    |||||||||||||||  |||||||||||     ||||||||||||| ||||||||||||||||||||||    
T  28023776 tttttctattcccaaacacattttatatgtgagaataaaatttaatgaacttgtaacaaatatagacat 28023844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 20962534 - 20962623
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    |||||||||||||  ||| ||||||||||   ||||||||||| ||||||||||||||| |||| ||  |  |||||||||||||||||||    
T  20962534 ttttctattcccagaaacgttttatatccgagaataaaatttagtaaacttgtaacaaacataggcacgt-gtattcctatcattttattc 20962623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 28429664 - 28429733
Alignment:
Q  54 ttttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    |||||||| | | ||||||||||| |||||||||||||||||||| ||| | ||||| |||||||||||||    
T  28429664 ttttatattcgggaataaaatttagtaaacttgtaacaaatataggcatgt-atatttctatcattttatt 28429733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 40275882 - 40275813
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatat 104  Q
    ||||||||||||| ||| |||| |||||  | |||||||||||  |||||||||||||| ||||||||||    
T  40275882 ttttctattcccaggaatatttcatatctgggaataaaatttagcaaacttgtaacaaacatagacatat 40275813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 19089845 - 19089777
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacat 102  Q
    ||||||||||||||| ||| |||||||  ||  ||||||||||||||||||| ||||||| ||| ||||    
T  19089845 tttttctattcccaaaaacgttttatactcaagaataaaatttaataaacttataacaaacataaacat 19089777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 35602920 - 35602888
Alignment:
Q  65 gaaataaaatttaataaacttgtaacaaatata 97  Q
    |||||||||||||||||||||||||||||||||    
T  35602920 gaaataaaatttaataaacttgtaacaaatata 35602888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 15200641 - 15200547
Alignment:
Q  67 aataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaaagaaacacacc 162  Q
    |||||||||||||||| || ||||||| |||||||||| |||||  |||||||||||| ||  ||||| | ||||||| | ||||| |||| ||||    
T  15200641 aataaaatttaataaatttataacaaacatagacatat-atatttatatcattttattttcaaaaatctataaatataacttgaaacaaacgcacc 15200547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 830116 - 830056
Alignment:
Q  66 aaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctc 127  Q
    |||||||||||||||||||||||||||| |||  ||||| |||||  |||| ||||||||||    
T  830116 aaataaaatttaataaacttgtaacaaacatattcatat-atattgatatctttttattctc 830056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 9395378 - 9395342
Alignment:
Q  2 ttctcttataaataggaccggaagaagtaatattttt 38  Q
    |||||||||||||||||||||| | ||||||||||||    
T  9395378 ttctcttataaataggaccggaggtagtaatattttt 9395342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 165
Target Start/End: Complemental strand, 6231629 - 6231499
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||| | |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||||||  |||    
T  6231629 tttttctattccaaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattctcgggaat 6231531  T
Q  134 caacaaatatatcgtgaaagaaacacacccct 165  Q
    |||||| |||| | ||||| ||||||||||||    
T  6231530 caacaattataacttgaaacaaacacacccct 6231499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 26848965 - 26849093
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  26848965 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 26849063  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  26849064 caacaattataacttgaaacaaacacaccc 26849093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 40908208 - 40908336
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  40908208 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 40908306  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  40908307 caacaattataacttgaaacaaacacaccc 40908336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 31436052 - 31435923
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    |||||||||||  || |||||||||||| |||| ||||||||||| ||||||||||||||| |||| ||||| | ||| ||||||||||||||||   ||    
T  31436052 atttttctattttcaggaacattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatat-acatttctatcattttattctcaggaa 31435954  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||| | ||||| ||||||||||    
T  31435953 tcaacaaatataacttgaaacaaacacaccc 31435923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 33218041 - 33217917
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||||||||||  | | |||||||||||||||| |||||||||| |||| ||||| | |||||||||||||||||| || ||||    
T  33218041 tttttctattcccaggaacattttatactcgggaataaaatttaataaatttgtaacaaacataggcatat-acattcctatcattttattcccggaaat 33217943  T
Q  134 caacaaatatatcgtgaaagaaacac 159  Q
    |||||| |||| | ||||| ||||||    
T  33217942 caacaattataacttgaaacaaacac 33217917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 43132253 - 43132157
Alignment:
Q  66 aaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||  |||||||||||||| | ||||| ||||||||||    
T  43132253 aaataaaatttaataaacttgtaacaaacataggcatata-tattcctattattttattctcgagaatcaacaaatataacttgaaacaaacacaccc 43132157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 31611113 - 31611003
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||||||||| | ||||| |||||||||||| ||  |||    
T  31611113 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatat-acattccaatcattttattcccgggaat 31611015  T
Q  134 caacaaatatat 145  Q
    |||||| |||||    
T  31611014 caacaattatat 31611003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 8476436 - 8476308
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| | || ||||| | ||||| |||||||||||| ||  |||    
T  8476436 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacacaggcatat-acattccaatcattttattcccgggaat 8476338  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  8476337 caacaattataacttgaaacaaacacaccc 8476308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 11239248 - 11239120
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  11239248 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 11239150  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  11239149 caacaattataacttgaaacaaacacaccc 11239120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 20297736 - 20297864
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||||||||||||||||||| |||| ||||| | ||| |||||||||||||  ||  |||    
T  20297736 tttttctattcccaggaacattttataccaaggaataaattttaataaacttgtaacaaacataggcatat-acatttctatcattttatttccgggaat 20297834  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  20297835 caacaattataacttgaaacaaacacaccc 20297864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 24574536 - 24574646
Alignment:
Q  52 cattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatatatcgtgaa 151  Q
    ||||||||| |||| ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  ||||||||| |||| | ||||    
T  24574536 cattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaatcaacaattataacttgaa 24574634  T
Q  152 agaaacacaccc 163  Q
    | ||||||||||    
T  24574635 acaaacacaccc 24574646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 28124564 - 28124435
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||| |||||| | |||||||||||| || | ||||||||||| ||||||| ||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  28124564 tttttatattccgaggaacattttatacccgggaataaaatttagtaaacttataacaaacataggcatat-acattcctatcattttattcccgagaat 28124466  T
Q  134 caacaaatatatcgtgaaagaaacacacccc 164  Q
    |||||| |||| | ||||| |||||||||||    
T  28124465 caacaattataacttgaaacaaacacacccc 28124435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 48339885 - 48339760
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | |||  ||||||||||||| || ||||    
T  48339885 tttttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttatatcattttattcccggaaat 48339787  T
Q  134 caacaaatatatcgtgaaagaaacaca 160  Q
    |||||| |||| | ||||| |||||||    
T  48339786 caacaattataacttgaaacaaacaca 48339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 9320576 - 9320448
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||| |||||||| || | ||||||||||| ||||||||||||||| |||   |||| | |||||||||||||||||| ||  |||    
T  9320576 tttttctattcccaggaatattttatacccgggaataaaatttagtaaacttgtaacaaacataagtatat-acattcctatcattttattcccgggaat 9320478  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  9320477 caacaattataacttgaaacaaacacaccc 9320448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 44952251 - 44952379
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||||||||||||  ||||||||||| | || |||||| |||| ||||||||||||||| |||| ||||| | ||| |||||||||||||| ||  |||    
T  44952251 tttttctattcccagaaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatat-acatttctatcattttattcccgggaat 44952349  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  44952350 caacaattataacttgaaacaaacacaccc 44952379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 53165852 - 53165764
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    |||||||||||||  |||||||||||||| | ||||||||||| ||||||||||||||| |||  ||||| |||||||||||||||||||    
T  53165852 ttttctattcccagaaacattttatatccgggaataaaatttagtaaacttgtaacaaacataagcatat-atattcctatcattttatt 53165764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 46359896 - 46359985
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    |||||||||| ||||||||||||||| || | ||||||||||| ||||||||||||||| ||||  |||| | ||||||||||||||||||    
T  46359896 ttttctattcacaagaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggtatat-acattcctatcattttattc 46359985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 20414593 - 20414465
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||| |||| |||||||||||||||| || | ||||||||||| |||| || ||||||| |||| ||||| | ||||| |||||||||||| |  ||||    
T  20414593 tttttttatttccaagaacattttatacccgggaataaaatttagtaaatttataacaaacataggcatat-acattccaatcattttattcccagaaat 20414495  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  20414494 caacaattataacttgaaacaaacacaccc 20414465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 161
Target Start/End: Original strand, 1099141 - 1099267
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| | || |||||| |||| ||||||||||||||| ||||  |||| | ||| |||||||||||||| ||  |||    
T  1099141 tttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatagggatat-acatttctatcattttattcccgggaat 1099239  T
Q  134 caacaaatatatcgtgaaagaaacacac 161  Q
    |||||| |||| | | ||| ||||||||    
T  1099240 caacaattataacttaaaacaaacacac 1099267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 10822846 - 10822737
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | |||    |||| ||||||||||||||| |||||||||||   ||| ||||||||||||| || ||||    
T  10822846 tttttctattcccaggaacattttatacccgggaattttttttagtaaacttgtaacaaacatagacatatacacttc-tatcattttattcccggaaat 10822748  T
Q  134 caacaaatata 144  Q
    |||||||||||    
T  10822747 caacaaatata 10822737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 163
Target Start/End: Complemental strand, 47114985 - 47114857
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    ||||| |||| ||| ||||||||||||  | | ||||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||||| |   |||    
T  47114985 tttttttatttccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacataggcatat-acattccaatcattttattcccaggaat 47114887  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  47114886 caacaattataacttgaaacaaacacaccc 47114857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 18460881 - 18460953
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatata 105  Q
    |||||||||||||||  ||||||||||| | |  ||||||||||| ||||||||||||||| |||||||||||    
T  18460881 atttttctattcccagaaacattttataccaaagaataaaatttagtaaacttgtaacaaacatagacatata 18460953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 28139853 - 28139789
Alignment:
Q  29 taatatttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||| ||||||||||||||||| ||||||||||  |||||||||||| ||| |||||||||||    
T  28139853 taatatatttctattcccaagaacgttttatatccgaaaataaaatttactaatcttgtaacaaa 28139789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 45826723 - 45826775
Alignment:
Q  37 ttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaa 89  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  45826723 ttctattcccaggaacattttatatcatgaaataaaatttaataaacttgtaa 45826775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 12228384 - 12228294
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    ||||||||||||||  |||||||| || ||   ||||||||||| ||||||||||| ||| |||| ||||| ||||| ||||||||||||||    
T  12228384 tttttctattcccagaaacattttgtacccgagaataaaatttagtaaacttgtaataaacataggcatat-atatttctatcattttattc 12228294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 43719058 - 43718987
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatata 105  Q
    ||||||||||| || |||||||||||  | || |||||| |||||||||||||||||||| ||||| |||||    
T  43719058 tttttctattctcaggaacattttatgccaaggaataaattttaataaacttgtaacaaacatagatatata 43718987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 1247030 - 1246921
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||| ||| |||||||||||     | ||||||||||| ||||||||||||||| |||  |||||  |||| |||||||||||||| ||  |||    
T  1247030 tttttctattaccaggaacattttattcttgggaataaaatttagtaaacttgtaacaaacataagcatat-gtatttctatcattttattcccgagaat 1246932  T
Q  134 caacaaatata 144  Q
    |||||||||||    
T  1246931 caacaaatata 1246921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 163
Target Start/End: Complemental strand, 28770339 - 28770210
Alignment:
Q  33 atttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaa 132  Q
    ||||||||||| | | |||| ||||||| |||| ||| ||||||| |||||||||| |||| ||||||||   ||||| ||||| |||||||| |   ||    
T  28770339 atttttctattgctaggaacgttttatacccaggaatcaaatttagtaaacttgtaccaaacatagacat-gcatatttctatctttttattcccaggaa 28770241  T
Q  133 tcaacaaatatatcgtgaaagaaacacaccc 163  Q
    || || |||||| | ||||||||||||||||    
T  28770240 tctacgaatataacttgaaagaaacacaccc 28770210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 33497800 - 33497889
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    ||||| ||||| || ||||||||| |||||   |||||||||||||||| ||||||||||||||  ||| | ||||| |||||||||||||    
T  33497800 tttttttattctcatgaacattttgtatcctagaataaaatttaataaatttgtaacaaatataagcatgt-atatttctatcattttatt 33497889  T

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Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 12931067 - 12930999
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatat 104  Q
    |||||||||||||  ||||||||||| || | ||||||||||| ||||||||||||||| |||| |||||    
T  12931067 ttttctattcccataaacattttata-ccgggaataaaatttagtaaacttgtaacaaacatagccatat 12930999  T

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Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 6832079 - 6832016
Alignment:
Q  38 tctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacat 102  Q
    |||||||||| ||| |||||||| || | ||||||||||| ||||||||||||||| ||||||||    
T  6832079 tctattcccaggaatattttata-cctggaataaaatttagtaaacttgtaacaaacatagacat 6832016  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 29512635 - 29512694
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||||||||| | ||||||||||||  ||| ||||||||||| |||||||| ||||||    
T  29512635 tttttctattccgatgaacattttatactcaggaataaaatttagtaaacttgaaacaaa 29512694  T

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Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 40584562 - 40584613
Alignment:
Q  53 attttatatccagaaataaaatttaataaacttgtaacaaatatagacatat 104  Q
    |||||||||||  |||||||||||||||||||||||  ||| ||||||||||    
T  40584562 attttatatccgaaaataaaatttaataaacttgtagaaaacatagacatat 40584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 39932631 - 39932561
Alignment:
Q  56 ttatatccagaaataaaatttaataaacttgtaacaaatatagacatata-atattcctatcattttattc 125  Q
    |||||||| | ||||||||||| ||||||| ||||||| ||| ||||||| | ||| ||||||||||||||    
T  39932631 ttatatccgggaataaaatttagtaaacttataacaaacataaacatatatacatttctatcattttattc 39932561  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 26849238 - 26849194
Alignment:
Q  79 taaacttgtaacaaatatagacatataatattcctatcattttatt 124  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||    
T  26849238 taaacttgtaacaaacatagacatat-atatttctatcattttatt 26849194  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 32071390 - 32071446
Alignment:
Q  36 tttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaa 93  Q
    |||||||| ||| |||||||| ||| ||| |||||||||||| |||||||||||||||    
T  32071390 tttctatttccatgaacatttcataccca-aaataaaatttagtaaacttgtaacaaa 32071446  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 33647811 - 33647766
Alignment:
Q  54 ttttatatccagaaataaaatttaataaacttgtaacaaatataga 99  Q
    ||||||| |||| ||||||||||| ||||||||||||||| |||||    
T  33647811 ttttatacccaggaataaaatttagtaaacttgtaacaaacataga 33647766  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6013365 - 6013329
Alignment:
Q  1 attctcttataaataggaccggaagaagtaatatttt 37  Q
    ||||||||||||||||||||||| | |||||||||||    
T  6013365 attctcttataaataggaccggagggagtaatatttt 6013329  T

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Target: scaffold0006 (Bit Score: 62; Significance: 9e-27; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 201868 - 201996
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||| |||||||| || ||||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| ||  |||    
T  201868 tttttctattcccaggaatattttatacccggaaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgggaat 201966  T
Q  134 caacaaatatatcgtgaaagaaacacaccc 163  Q
    |||||| |||| | ||||| ||||||||||    
T  201967 caacaattataacttgaaacaaacacaccc 201996  T

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Target: scaffold0006; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 143556 - 143662
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||  || |||||| ||||| ||||||||||||||||   |||    
T  143556 tttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacgtatacatat-atatttctatcattttattctcaggaat 143654  T
Q  134 caacaaat 141  Q
    ||||||||    
T  143655 caacaaat 143662  T

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Target: scaffold0006; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 119264 - 119353
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattc 125  Q
    ||||||||||||| ||||||||||||  ||  ||||||||||| ||||||||||||||| |||||||| | ||||| |||||||| |||||    
T  119264 ttttctattcccaggaacattttatactcatgaataaaatttagtaaacttgtaacaaacatagacatgt-atatttctatcattgtattc 119353  T

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Target: scaffold0189 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 29080 - 28957
Alignment:
Q  34 tttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaat 133  Q
    |||||||||||||| |||||||||||| || | ||||||||||| ||||||||||||||| |||| ||||| | |||||||||||||||||| || ||||    
T  29080 tttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat-acattcctatcattttattcccgaaaat 28982  T
Q  134 caacaaatatatcgtgaaagaaaca 158  Q
    |||||| |||| | ||||| |||||    
T  28981 caacaattataacttgaaacaaaca 28957  T

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Target: scaffold0702 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 163
Target Start/End: Complemental strand, 3692 - 3565
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||||| ||||||||||||  | | ||||||||||| ||||||||||||||| |||| ||||| |||||  ||| |||||||||    |||||    
T  3692 ttttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacataggcatat-atatttttataattttattcctagaaatc 3594  T
Q  135 aacaaatatatcgtgaaagaaacacaccc 163  Q
     ||||||||| | ||||| ||||||||||    
T  3593 tacaaatataacttgaaacaaacacaccc 3565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 4412 - 4539
Alignment:
Q  35 ttttctattcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatc 134  Q
    ||||||||||||| ||||||||||||  | | ||||||||||| ||||||||||||||| |||| ||||| |||||  ||| |||||||||    |||||    
T  4412 ttttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacataggcatat-atatttttataattttattcctagaaatc 4510  T
Q  135 aacaaatatatcgtgaaagaaacacaccc 163  Q
     ||||||||| | ||||| ||||||||||    
T  4511 tacaaatataacttgaaacaaacacaccc 4539  T

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Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 23391 - 23315
Alignment:
Q  67 aataaaatttaataaacttgtaacaaatatagacatataatattcctatcattttattctcgtaaatcaacaaatata 144  Q
    ||||||||||| ||||||||||||||| |||||||| | ||||| |||| |||||||||||  ||||| |||||||||    
T  23391 aataaaatttagtaaacttgtaacaaacatagacatgt-atatttctataattttattctcagaaatctacaaatata 23315  T

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Target: scaffold0069 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 21908 - 21854
Alignment:
Q  44 cccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatag 98  Q
    |||| |||||||||||||| || |||||||||||||||||||| |||||| ||||    
T  21908 cccaggaacattttatatctaggaataaaatttaataaacttgcaacaaacatag 21854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1480 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1480
Description:

Target: scaffold1480; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 506 - 449
Alignment:
Q  41 attcccaagaacattttatatccagaaataaaatttaataaacttgtaacaaatatag 98  Q
    ||||||| |||||||||||||  || |||||||||||||||||||| |||||| ||||    
T  506 attcccaggaacattttatatttaggaataaaatttaataaacttgcaacaaacatag 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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