View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11891_high_8 (Length: 424)
Name: NF11891_high_8
Description: NF11891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11891_high_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 1 - 424
Target Start/End: Complemental strand, 19576159 - 19575736
Alignment:
| Q |
1 |
taaggttcagagggcaattttgaggcagggaagtcttgcgtttatgaaaaatgggtatattcgaagtggaaggaagtttagatggttgaagcttgacgaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19576159 |
taaggttcagagggcaattttgaggcagggaagtcttgcgattatgaaaaacgggtatattcgaagtggaaggaagtttagatggttgaagcttgacgaa |
19576060 |
T |
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| Q |
101 |
tctgcggattctaaactgttggggtatcctcaagctttgacaaagttttgttattttctaatggatgctttgagagaaaagggtgcgaggatgaagcctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19576059 |
tctgcggattctaaactgttggggtatcctcaagctttgacaaagttttgttattttctaatggatgctttgagagaaaagggtgcgaggatgaagcctt |
19575960 |
T |
|
| Q |
201 |
tgatctgtgcttgtatgtctcaggaaccgaataaagttcttgttgttggggtttgtgggaggcctcgtttggctgctgctcaaggaaatgcgttcggggt |
300 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19575959 |
tgatctgtgcttgtatgtctcaggaaccaaataaagttcttgttgttggggtttgtgggaggcctcgtttggctgctgctcaaggaaatgcgttcggggt |
19575860 |
T |
|
| Q |
301 |
tgcgtttaaaagtgcagctgaggactctgacagtgagtttttccatgagttgtttgagtcttcttggatagtgttagaatctaaagcagttaattctttc |
400 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19575859 |
tgcgtttagaagtgcagctgaggactctgacagtgagtttttccatgagttgtttgagtcttcttggatagtgttagaatctaaagcagttaattctttc |
19575760 |
T |
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| Q |
401 |
atggttaagttgactgagaaactt |
424 |
Q |
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|||||||||||||||||||||||| |
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| T |
19575759 |
atggttaagttgactgagaaactt |
19575736 |
T |
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