View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11892_high_33 (Length: 245)
Name: NF11892_high_33
Description: NF11892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11892_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 42926438 - 42926667
Alignment:
| Q |
1 |
tagaatacgaatccaccgattcatgagtcggaaaaatctccgagtcggaatcggagtcgttgttttcgttaacatagtgttgaaaagcgcttagcgcttc |
100 |
Q |
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| T |
42926438 |
tagaatacgaatccaccgattcatgagtcggaaaaatctccgagtcggaatcggagtcgttgttttcgttaacatagtgttgaaaagcgcttagcgcttc |
42926537 |
T |
|
| Q |
101 |
ttgcatgtagaactgagaataatcgtcgtttgatgttaaaggtgaaaagatctccgccgtgggattgttcaacgttggccatggtggaacgtgtacggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42926538 |
ttgcatgtagaactgagaataatcgtcgtttgatgttaaaggtgaaaagatctccgccgtgggattgttcaacgttggccatggtggaacgtgtacggtt |
42926637 |
T |
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| Q |
201 |
ggatttgtacgatgaggtggttcccctaac |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
42926638 |
ggatttgtacgatgaggtggttcccctaac |
42926667 |
T |
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