View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11892_high_37 (Length: 230)
Name: NF11892_high_37
Description: NF11892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11892_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 11 - 224
Target Start/End: Complemental strand, 12870802 - 12870589
Alignment:
| Q |
11 |
acaacgactcacacatttagggacgaaaataactattcactaacgaaagtgtcgaattagaataaatgtaactaacctgaattccttgtacaaatagaaa |
110 |
Q |
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| T |
12870802 |
acaacgactcacacatttagggacgaaaataactattcactaacgaaagtgtcgaattagaatcaatgtaactaacctgaattccttgtacaaatagaaa |
12870703 |
T |
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| Q |
111 |
gagtcaatagcccaacccttttttctatcagcagccaaaaccgaccaagaagccaaacagaaaacaaaaccagcaactctaagacccaacaaaaccttat |
210 |
Q |
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| T |
12870702 |
gagtcaatagcccaacccttttttctatcagcagccaaaaccgaccaagaaaccaaacagaaaacaaaaccagcaactctaagacccaacaaaaccttat |
12870603 |
T |
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| Q |
211 |
tcaaactcacaact |
224 |
Q |
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|||||||||||||| |
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| T |
12870602 |
tcaaactcacaact |
12870589 |
T |
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