View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11892_high_7 (Length: 492)

Name: NF11892_high_7
Description: NF11892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11892_high_7
NF11892_high_7
[»] chr3 (70 HSPs)
chr3 (1-411)||(32582479-32582884)
chr3 (407-477)||(32582322-32582392)
chr3 (1-134)||(21367674-21367814)
chr3 (191-376)||(32325975-32326167)
chr3 (1-143)||(39980727-39980876)
chr3 (318-372)||(13799984-13800038)
chr3 (1-135)||(20880482-20880623)
chr3 (211-376)||(37334551-37334713)
chr3 (89-135)||(37273140-37273186)
chr3 (5-138)||(402469-402609)
chr3 (318-375)||(43822592-43822649)
chr3 (313-373)||(44539192-44539253)
chr3 (83-134)||(901931-901982)
chr3 (12-143)||(30443891-30444029)
chr3 (317-375)||(1384249-1384307)
chr3 (322-376)||(2948876-2948930)
chr3 (1-143)||(18405754-18405903)
chr3 (1-69)||(584122-584193)
chr3 (86-143)||(3845577-3845634)
chr3 (70-135)||(35394497-35394562)
chr3 (89-138)||(39602228-39602277)
chr3 (84-145)||(50600191-50600252)
chr3 (83-143)||(26990503-26990563)
chr3 (83-143)||(44747420-44747480)
chr3 (105-144)||(23816047-23816086)
chr3 (87-138)||(24158519-24158570)
chr3 (1-108)||(31365111-31365225)
chr3 (83-134)||(35696245-35696296)
chr3 (83-134)||(47132338-47132389)
chr3 (215-375)||(34778279-34778435)
chr3 (318-376)||(36293299-36293356)
chr3 (83-132)||(466202-466251)
chr3 (96-145)||(2719464-2719513)
chr3 (77-138)||(20669175-20669236)
chr3 (78-143)||(36631058-36631123)
chr3 (89-138)||(41633363-41633412)
chr3 (89-145)||(14548739-14548795)
chr3 (89-145)||(24280707-24280763)
chr3 (89-145)||(24887301-24887357)
chr3 (86-134)||(33972749-33972797)
chr3 (89-132)||(26542546-26542589)
chr3 (78-145)||(28622006-28622073)
chr3 (325-376)||(32645801-32645852)
chr3 (313-376)||(37243678-37243741)
chr3 (83-138)||(41452526-41452581)
chr3 (3-69)||(43046741-43046809)
chr3 (89-132)||(44488892-44488935)
chr3 (78-117)||(46478713-46478752)
chr3 (97-144)||(46886718-46886765)
chr3 (87-134)||(49465681-49465728)
chr3 (90-132)||(34254827-34254869)
chr3 (319-376)||(37083903-37083961)
chr3 (12-124)||(38902083-38902201)
chr3 (87-141)||(39311695-39311749)
chr3 (179-253)||(43822713-43822787)
chr3 (89-139)||(48528558-48528608)
chr3 (277-358)||(1265363-1265444)
chr3 (78-143)||(20170521-20170586)
chr3 (97-134)||(22203437-22203474)
chr3 (1-69)||(24085261-24085332)
chr3 (278-335)||(31534457-31534514)
chr3 (104-145)||(33405200-33405241)
chr3 (210-294)||(38053581-38053666)
chr3 (78-143)||(53789468-53789533)
chr3 (227-294)||(32109889-32109957)
chr3 (4-40)||(34235019-34235055)
chr3 (77-137)||(36783340-36783400)
chr3 (78-138)||(41644452-41644512)
chr3 (5-68)||(42747709-42747775)
chr3 (83-135)||(44284092-44284144)
[»] chr5 (72 HSPs)
chr5 (190-376)||(34640093-34640281)
chr5 (247-376)||(1621438-1621570)
chr5 (249-375)||(32882785-32882909)
chr5 (191-376)||(2941982-2942170)
chr5 (1-143)||(16937806-16937955)
chr5 (1-138)||(9202671-9202815)
chr5 (241-373)||(32826650-32826785)
chr5 (216-375)||(6462239-6462400)
chr5 (5-145)||(12425567-12425716)
chr5 (77-138)||(4014430-4014491)
chr5 (9-134)||(10639960-10640092)
chr5 (10-143)||(29925839-29925978)
chr5 (217-376)||(31677201-31677369)
chr5 (47-145)||(39105460-39105562)
chr5 (3-146)||(7984964-7985114)
chr5 (10-137)||(15246837-15246971)
chr5 (1-145)||(41534437-41534585)
chr5 (1-69)||(9107166-9107237)
chr5 (70-143)||(28776991-28777064)
chr5 (84-141)||(37954686-37954743)
chr5 (89-145)||(6183440-6183496)
chr5 (1-145)||(41419316-41419466)
chr5 (318-376)||(9004877-9004936)
chr5 (102-145)||(11095502-11095545)
chr5 (227-376)||(18336861-18337010)
chr5 (89-144)||(33533557-33533612)
chr5 (70-145)||(42100307-42100382)
chr5 (1-127)||(7705921-7706054)
chr5 (318-376)||(16869908-16869966)
chr5 (83-145)||(37588372-37588434)
chr5 (89-135)||(41052874-41052920)
chr5 (266-372)||(17259525-17259632)
chr5 (269-357)||(19397500-19397589)
chr5 (77-138)||(36638750-36638811)
chr5 (77-134)||(37611221-37611278)
chr5 (77-134)||(37787951-37788008)
chr5 (1-69)||(39594883-39594954)
chr5 (263-366)||(1014969-1015071)
chr5 (89-145)||(12975343-12975398)
chr5 (336-376)||(28363490-28363530)
chr5 (82-134)||(32009699-32009751)
chr5 (1-68)||(32010022-32010092)
chr5 (89-145)||(32172649-32172705)
chr5 (1-69)||(499654-499726)
chr5 (4-127)||(1464946-1465076)
chr5 (43-135)||(4619713-4619808)
chr5 (96-135)||(7319033-7319072)
chr5 (83-138)||(11684417-11684472)
chr5 (86-137)||(12857720-12857771)
chr5 (320-375)||(17902715-17902770)
chr5 (1-40)||(22209747-22209786)
chr5 (104-143)||(32942616-32942655)
chr5 (89-140)||(35095804-35095855)
chr5 (83-134)||(36318781-36318832)
chr5 (88-127)||(42500258-42500297)
chr5 (1-69)||(1773029-1773098)
chr5 (99-145)||(4620189-4620235)
chr5 (77-127)||(12521542-12521592)
chr5 (9-66)||(15015922-15015982)
chr5 (89-135)||(26005015-26005061)
chr5 (227-292)||(28363539-28363605)
chr5 (83-145)||(37526211-37526273)
chr5 (4-68)||(3520654-3520721)
chr5 (89-134)||(12242728-12242773)
chr5 (89-138)||(13604867-13604916)
chr5 (78-127)||(13697766-13697815)
chr5 (89-134)||(17368683-17368728)
chr5 (5-69)||(24030105-24030170)
chr5 (89-138)||(41957469-41957518)
chr5 (77-145)||(6587113-6587181)
chr5 (313-373)||(6588397-6588456)
chr5 (321-373)||(13838823-13838875)
[»] chr4 (81 HSPs)
chr4 (232-376)||(24418115-24418259)
chr4 (3-147)||(40174557-40174702)
chr4 (277-373)||(41963308-41963402)
chr4 (205-376)||(47789350-47789523)
chr4 (179-376)||(52831511-52831704)
chr4 (1-143)||(17822788-17822937)
chr4 (1-134)||(54426050-54426190)
chr4 (263-372)||(31736049-31736158)
chr4 (1-125)||(13126499-13126630)
chr4 (1-145)||(35571554-35571705)
chr4 (78-134)||(55414427-55414483)
chr4 (1-143)||(21731579-21731728)
chr4 (5-127)||(25904150-25904279)
chr4 (1-69)||(49940090-49940161)
chr4 (89-133)||(825508-825552)
chr4 (13-145)||(1706618-1706757)
chr4 (316-376)||(20988774-20988834)
chr4 (83-134)||(2996580-2996631)
chr4 (232-373)||(52714370-52714513)
chr4 (83-138)||(55302252-55302307)
chr4 (83-145)||(11802530-11802592)
chr4 (83-145)||(14011230-14011292)
chr4 (4-114)||(22030230-22030347)
chr4 (205-294)||(39276510-39276600)
chr4 (318-376)||(44555668-44555726)
chr4 (88-145)||(20031745-20031802)
chr4 (277-372)||(20435493-20435587)
chr4 (1-69)||(23319929-23319998)
chr4 (1-134)||(24169270-24169410)
chr4 (4-56)||(39691075-39691130)
chr4 (41-127)||(50681055-50681145)
chr4 (89-145)||(3155599-3155655)
chr4 (83-143)||(16199993-16200053)
chr4 (5-133)||(29388622-29388757)
chr4 (78-134)||(44862991-44863047)
chr4 (318-402)||(51379804-51379893)
chr4 (1-68)||(53294037-53294107)
chr4 (1-55)||(15173226-15173283)
chr4 (1-40)||(27043753-27043792)
chr4 (89-144)||(28431334-28431389)
chr4 (317-356)||(31404621-31404660)
chr4 (318-376)||(37713251-37713310)
chr4 (83-134)||(40831042-40831092)
chr4 (90-145)||(42121484-42121539)
chr4 (83-138)||(52259634-52259689)
chr4 (43-136)||(55064838-55064937)
chr4 (318-376)||(466655-466713)
chr4 (96-138)||(942133-942175)
chr4 (89-127)||(2592327-2592365)
chr4 (89-135)||(18628561-18628607)
chr4 (1-58)||(18815110-18815170)
chr4 (318-376)||(21501673-21501730)
chr4 (318-376)||(26552151-26552209)
chr4 (225-255)||(50570225-50570255)
chr4 (83-145)||(50800042-50800103)
chr4 (89-135)||(53673676-53673722)
chr4 (86-127)||(2244065-2244106)
chr4 (77-134)||(6466052-6466109)
chr4 (334-375)||(17425642-17425683)
chr4 (89-126)||(27123370-27123407)
chr4 (419-448)||(30071637-30071666)
chr4 (240-293)||(31998384-31998437)
chr4 (84-145)||(44319945-44320006)
chr4 (89-138)||(47800626-47800675)
chr4 (72-145)||(49202641-49202714)
chr4 (78-127)||(50662745-50662794)
chr4 (1-134)||(52315120-52315260)
chr4 (302-366)||(55723169-55723234)
chr4 (83-139)||(4798578-4798634)
chr4 (89-145)||(7694028-7694084)
chr4 (78-134)||(7839368-7839424)
chr4 (90-138)||(10365775-10365822)
chr4 (83-127)||(25487577-25487621)
chr4 (110-138)||(25548568-25548596)
chr4 (222-258)||(27611816-27611852)
chr4 (89-137)||(29563422-29563470)
chr4 (319-375)||(30070214-30070270)
chr4 (78-134)||(33586962-33587018)
chr4 (87-143)||(39691159-39691215)
chr4 (89-137)||(50004162-50004210)
chr4 (89-145)||(51630107-51630163)
[»] chr1 (82 HSPs)
chr1 (227-366)||(1714040-1714181)
chr1 (183-376)||(31117556-31117749)
chr1 (190-376)||(35272452-35272637)
chr1 (45-138)||(51929509-51929606)
chr1 (1-138)||(10199331-10199475)
chr1 (3-134)||(49938754-49938892)
chr1 (1-143)||(3233938-3234087)
chr1 (232-376)||(22593514-22593660)
chr1 (1-68)||(50644178-50644248)
chr1 (1-132)||(7941615-7941753)
chr1 (78-145)||(45975686-45975753)
chr1 (4-137)||(2295100-2295240)
chr1 (78-143)||(24915058-24915123)
chr1 (318-399)||(7583472-7583555)
chr1 (313-376)||(32602855-32602918)
chr1 (4-138)||(6102157-6102297)
chr1 (322-376)||(20004033-20004087)
chr1 (213-290)||(32348407-32348485)
chr1 (206-371)||(32359243-32359405)
chr1 (89-138)||(2522632-2522681)
chr1 (89-138)||(7137016-7137065)
chr1 (76-145)||(7218079-7218148)
chr1 (89-134)||(12564517-12564562)
chr1 (9-113)||(29904779-29904890)
chr1 (89-145)||(34290232-34290288)
chr1 (83-135)||(41195205-41195257)
chr1 (1-138)||(6292496-6292639)
chr1 (87-134)||(32548647-32548694)
chr1 (83-138)||(35179142-35179197)
chr1 (78-137)||(37631566-37631625)
chr1 (340-375)||(42747678-42747713)
chr1 (1-123)||(43230695-43230822)
chr1 (72-134)||(51695496-51695558)
chr1 (78-143)||(473162-473227)
chr1 (1-69)||(5721001-5721072)
chr1 (182-290)||(21516465-21516574)
chr1 (89-134)||(26779943-26779988)
chr1 (7-63)||(33204323-33204382)
chr1 (318-375)||(35926608-35926665)
chr1 (269-373)||(42695409-42695514)
chr1 (78-134)||(1510317-1510373)
chr1 (89-145)||(14629984-14630040)
chr1 (1-52)||(15784410-15784464)
chr1 (232-373)||(20791822-20791968)
chr1 (5-131)||(37593611-37593744)
chr1 (183-255)||(42747731-42747803)
chr1 (83-134)||(1509758-1509809)
chr1 (83-134)||(29834917-29834968)
chr1 (89-136)||(35017581-35017628)
chr1 (233-295)||(35058681-35058744)
chr1 (8-66)||(36514606-36514667)
chr1 (316-375)||(48573497-48573555)
chr1 (83-145)||(2294907-2294969)
chr1 (323-376)||(5046983-5047034)
chr1 (96-138)||(16322852-16322894)
chr1 (89-143)||(17778955-17779009)
chr1 (89-135)||(28077087-28077133)
chr1 (1-35)||(33723305-33723339)
chr1 (270-376)||(37131419-37131525)
chr1 (43-138)||(37811855-37811953)
chr1 (96-138)||(51929800-51929842)
chr1 (419-449)||(52596414-52596444)
chr1 (6-66)||(6557051-6557114)
chr1 (77-138)||(10744304-10744365)
chr1 (86-143)||(17603399-17603456)
chr1 (88-137)||(24225251-24225300)
chr1 (210-294)||(28870456-28870541)
chr1 (89-145)||(30259504-30259561)
chr1 (77-134)||(35925697-35925754)
chr1 (1-69)||(37617388-37617459)
chr1 (9-69)||(38001671-38001734)
chr1 (78-143)||(42174853-42174918)
chr1 (89-134)||(51957401-51957446)
chr1 (89-145)||(2777888-2777944)
chr1 (1-29)||(3319869-3319897)
chr1 (1-68)||(5741683-5741753)
chr1 (77-121)||(6262040-6262084)
chr1 (89-145)||(8130432-8130488)
chr1 (89-145)||(10809341-10809397)
chr1 (89-145)||(37842373-37842429)
chr1 (324-376)||(38322081-38322133)
chr1 (89-129)||(40943245-40943285)
[»] scaffold0040 (1 HSPs)
scaffold0040 (318-376)||(49862-49920)
[»] chr6 (58 HSPs)
chr6 (232-376)||(724618-724764)
chr6 (242-363)||(5976699-5976823)
chr6 (321-373)||(9749906-9749958)
chr6 (77-145)||(31624086-31624154)
chr6 (10-127)||(2455005-2455126)
chr6 (318-373)||(9750243-9750298)
chr6 (268-358)||(17328630-17328721)
chr6 (9-134)||(20368109-20368243)
chr6 (318-367)||(6329704-6329753)
chr6 (316-372)||(2046119-2046175)
chr6 (89-132)||(2455819-2455862)
chr6 (83-134)||(9763567-9763618)
chr6 (318-373)||(19345865-19345920)
chr6 (83-134)||(34430473-34430524)
chr6 (89-143)||(835267-835321)
chr6 (301-358)||(3341187-3341245)
chr6 (321-367)||(6338561-6338607)
chr6 (232-293)||(8014431-8014493)
chr6 (83-145)||(9667997-9668059)
chr6 (72-138)||(24476605-24476671)
chr6 (318-371)||(4405558-4405611)
chr6 (78-143)||(6536613-6536678)
chr6 (9-134)||(13907592-13907722)
chr6 (313-373)||(3951902-3951962)
chr6 (1-40)||(835184-835223)
chr6 (91-134)||(2205610-2205653)
chr6 (83-138)||(4246413-4246468)
chr6 (77-132)||(4420652-4420707)
chr6 (83-138)||(8420209-8420264)
chr6 (1-36)||(12111079-12111114)
chr6 (84-127)||(12628356-12628399)
chr6 (277-365)||(14755772-14755862)
chr6 (104-143)||(24982703-24982742)
chr6 (216-294)||(29052694-29052773)
chr6 (313-367)||(6352299-6352352)
chr6 (89-135)||(6647393-6647439)
chr6 (318-376)||(9197190-9197248)
chr6 (83-137)||(30536514-30536568)
chr6 (2-36)||(31338089-31338123)
chr6 (82-132)||(31624952-31625002)
chr6 (77-127)||(32729153-32729203)
chr6 (88-145)||(1275145-1275202)
chr6 (96-145)||(1401105-1401154)
chr6 (89-126)||(2460169-2460206)
chr6 (72-145)||(9109252-9109325)
chr6 (106-147)||(19376591-19376632)
chr6 (88-145)||(20861716-20861773)
chr6 (2-35)||(33737843-33737876)
chr6 (89-138)||(33787763-33787812)
chr6 (89-133)||(837234-837278)
chr6 (1-41)||(4163260-4163300)
chr6 (1-41)||(4224881-4224921)
chr6 (89-145)||(9093574-9093630)
chr6 (1-68)||(10645308-10645378)
chr6 (340-376)||(27903899-27903935)
chr6 (3-35)||(30784656-30784688)
chr6 (1-37)||(32205936-32205972)
chr6 (110-138)||(33074996-33075024)
[»] chr2 (88 HSPs)
chr2 (183-376)||(44984153-44984354)
chr2 (205-372)||(42139444-42139612)
chr2 (179-375)||(27863786-27863983)
chr2 (232-366)||(21721844-21721980)
chr2 (183-372)||(40909973-40910166)
chr2 (205-359)||(31063030-31063186)
chr2 (1-138)||(26143565-26143707)
chr2 (234-375)||(27679144-27679289)
chr2 (96-145)||(6167308-6167357)
chr2 (17-143)||(43279466-43279601)
chr2 (191-376)||(44810115-44810302)
chr2 (216-371)||(12238220-12238376)
chr2 (301-365)||(17487937-17488000)
chr2 (17-145)||(18066124-18066259)
chr2 (1-135)||(33319739-33319876)
chr2 (1-66)||(30331830-30331898)
chr2 (78-143)||(12464480-12464545)
chr2 (78-143)||(26202026-26202091)
chr2 (89-138)||(29316793-29316842)
chr2 (83-132)||(34652048-34652097)
chr2 (89-134)||(40279414-40279459)
chr2 (83-135)||(1939344-1939396)
chr2 (1-68)||(27317456-27317526)
chr2 (77-145)||(33931576-33931644)
chr2 (1-128)||(4606938-4607072)
chr2 (325-376)||(15804461-15804512)
chr2 (89-144)||(16867736-16867791)
chr2 (1-40)||(18179057-18179096)
chr2 (70-145)||(26626869-26626944)
chr2 (301-360)||(41501358-41501417)
chr2 (313-372)||(44809808-44809866)
chr2 (83-145)||(11513894-11513956)
chr2 (1-143)||(20952353-20952502)
chr2 (44-131)||(41812061-41812151)
chr2 (84-134)||(45229518-45229568)
chr2 (70-131)||(750680-750741)
chr2 (5-145)||(2142649-2142797)
chr2 (89-138)||(7871646-7871695)
chr2 (93-138)||(21616649-21616694)
chr2 (1-69)||(31561665-31561736)
chr2 (78-143)||(32592584-32592649)
chr2 (316-357)||(41090592-41090633)
chr2 (1-69)||(42419869-42419940)
chr2 (1-68)||(1633423-1633493)
chr2 (70-138)||(9174818-9174886)
chr2 (78-134)||(12289804-12289860)
chr2 (41-138)||(16451121-16451222)
chr2 (77-145)||(22681191-22681259)
chr2 (89-145)||(42621393-42621449)
chr2 (89-132)||(10646307-10646350)
chr2 (83-138)||(16398117-16398172)
chr2 (84-127)||(20926517-20926560)
chr2 (83-134)||(32098342-32098393)
chr2 (8-69)||(449923-449987)
chr2 (89-147)||(1893299-1893357)
chr2 (3-145)||(2416309-2416458)
chr2 (83-137)||(6546991-6547045)
chr2 (318-372)||(14477687-14477741)
chr2 (77-143)||(19333331-19333397)
chr2 (1-35)||(35329741-35329775)
chr2 (97-135)||(36852478-36852516)
chr2 (1-138)||(40682315-40682461)
chr2 (318-372)||(42034476-42034530)
chr2 (89-135)||(43205315-43205361)
chr2 (93-142)||(7862583-7862632)
chr2 (98-135)||(8017440-8017477)
chr2 (78-127)||(12194966-12195015)
chr2 (336-365)||(13547741-13547770)
chr2 (83-144)||(13736305-13736366)
chr2 (89-134)||(15977992-15978037)
chr2 (84-145)||(18179253-18179314)
chr2 (316-357)||(30401782-30401823)
chr2 (89-134)||(35379034-35379079)
chr2 (93-134)||(36863647-36863688)
chr2 (89-134)||(40279204-40279249)
chr2 (89-134)||(40279274-40279319)
chr2 (89-134)||(40279344-40279389)
chr2 (89-145)||(680499-680555)
chr2 (1-37)||(5043483-5043519)
chr2 (339-375)||(5701293-5701329)
chr2 (89-133)||(6227759-6227803)
chr2 (89-145)||(13869113-13869169)
chr2 (318-370)||(15967867-15967919)
chr2 (190-289)||(15967966-15968066)
chr2 (89-145)||(29628761-29628817)
chr2 (83-127)||(36125375-36125419)
chr2 (241-296)||(38325012-38325068)
chr2 (313-376)||(39710485-39710549)
[»] chr7 (60 HSPs)
chr7 (165-360)||(28175383-28175581)
chr7 (263-372)||(883801-883910)
chr7 (263-372)||(1243130-1243239)
chr7 (233-372)||(3837004-3837143)
chr7 (1-132)||(36517588-36517724)
chr7 (1-147)||(33678774-33678927)
chr7 (41-147)||(20526895-20527005)
chr7 (263-375)||(44235386-44235499)
chr7 (89-138)||(44821962-44822011)
chr7 (41-134)||(21568461-21568558)
chr7 (2-134)||(48470051-48470190)
chr7 (1-143)||(420358-420507)
chr7 (205-376)||(2525206-2525376)
chr7 (1-143)||(20526444-20526593)
chr7 (12-134)||(34744035-34744164)
chr7 (239-376)||(87164-87305)
chr7 (4-113)||(19302489-19302605)
chr7 (77-137)||(529379-529439)
chr7 (83-143)||(46280284-46280344)
chr7 (222-296)||(15050963-15051038)
chr7 (240-367)||(24847175-24847301)
chr7 (315-373)||(10097204-10097261)
chr7 (87-145)||(27548259-27548317)
chr7 (89-138)||(43648243-43648292)
chr7 (89-134)||(47130803-47130848)
chr7 (1-56)||(9210910-9210968)
chr7 (78-134)||(11619165-11619221)
chr7 (97-145)||(12110356-12110404)
chr7 (91-143)||(19022605-19022657)
chr7 (277-365)||(19087333-19087420)
chr7 (77-145)||(28165087-28165155)
chr7 (77-145)||(38010710-38010778)
chr7 (78-138)||(38499920-38499980)
chr7 (89-132)||(25596042-25596085)
chr7 (88-143)||(37064481-37064536)
chr7 (83-134)||(39505963-39506014)
chr7 (77-144)||(39967917-39967984)
chr7 (99-138)||(47559629-47559668)
chr7 (89-135)||(7244686-7244732)
chr7 (318-376)||(11991624-11991682)
chr7 (88-134)||(32410546-32410592)
chr7 (4-134)||(34035924-34036061)
chr7 (4-34)||(35267463-35267493)
chr7 (1-58)||(45338540-45338600)
chr7 (241-293)||(6244559-6244612)
chr7 (89-138)||(18749835-18749884)
chr7 (87-132)||(18865068-18865113)
chr7 (83-144)||(22283756-22283817)
chr7 (318-367)||(24837970-24838019)
chr7 (89-126)||(28128413-28128450)
chr7 (96-145)||(30812144-30812193)
chr7 (78-143)||(38138486-38138551)
chr7 (96-145)||(47177632-47177681)
chr7 (78-138)||(5947187-5947247)
chr7 (318-358)||(6990967-6991007)
chr7 (1-37)||(8427124-8427160)
chr7 (87-135)||(9050641-9050689)
chr7 (339-375)||(12473106-12473142)
chr7 (83-139)||(40377864-40377920)
chr7 (1-29)||(40598408-40598436)
[»] chr8 (66 HSPs)
chr8 (217-376)||(29861397-29861558)
chr8 (240-374)||(8407503-8407639)
chr8 (316-369)||(3346197-3346250)
chr8 (10-143)||(26771263-26771403)
chr8 (1-138)||(30251377-30251521)
chr8 (239-376)||(25019511-25019646)
chr8 (6-134)||(35534541-35534676)
chr8 (1-138)||(43717857-43718004)
chr8 (267-369)||(12525078-12525183)
chr8 (89-145)||(28769357-28769413)
chr8 (191-294)||(35764722-35764826)
chr8 (42-145)||(7514574-7514681)
chr8 (9-143)||(12976211-12976351)
chr8 (83-145)||(43504747-43504809)
chr8 (78-143)||(27028829-27028894)
chr8 (1-127)||(43045648-43045781)
chr8 (2-122)||(35643912-35644039)
chr8 (3-138)||(18133659-18133801)
chr8 (318-376)||(28444740-28444796)
chr8 (9-128)||(31716158-31716284)
chr8 (83-138)||(38874649-38874704)
chr8 (47-138)||(1930038-1930133)
chr8 (83-145)||(12361188-12361250)
chr8 (1-58)||(38602414-38602474)
chr8 (87-144)||(7514810-7514867)
chr8 (89-138)||(11795095-11795144)
chr8 (41-143)||(29168023-29168129)
chr8 (4-68)||(32840912-32840979)
chr8 (1-102)||(36963277-36963385)
chr8 (89-145)||(6509321-6509377)
chr8 (89-145)||(8062325-8062381)
chr8 (89-145)||(10114485-10114541)
chr8 (313-373)||(12367504-12367564)
chr8 (89-145)||(30013214-30013270)
chr8 (2-134)||(38648358-38648497)
chr8 (9-67)||(1058008-1058069)
chr8 (227-293)||(2111013-2111080)
chr8 (94-141)||(9836877-9836924)
chr8 (278-376)||(21367134-21367233)
chr8 (322-373)||(28947420-28947471)
chr8 (83-126)||(42597453-42597496)
chr8 (89-147)||(4762503-4762561)
chr8 (318-372)||(5111605-5111659)
chr8 (77-139)||(7918452-7918514)
chr8 (318-356)||(24523775-24523813)
chr8 (91-133)||(27754412-27754454)
chr8 (18-143)||(28763366-28763498)
chr8 (406-447)||(38289015-38289057)
chr8 (89-135)||(44236841-44236887)
chr8 (89-138)||(1433551-1433600)
chr8 (77-145)||(2482861-2482927)
chr8 (89-134)||(6864477-6864522)
chr8 (87-132)||(6875283-6875328)
chr8 (89-134)||(9956832-9956877)
chr8 (83-144)||(11183542-11183603)
chr8 (78-143)||(11861802-11861867)
chr8 (88-137)||(23775128-23775177)
chr8 (76-145)||(24558849-24558918)
chr8 (319-372)||(29692227-29692280)
chr8 (104-145)||(32841341-32841382)
chr8 (318-371)||(35764655-35764708)
chr8 (319-376)||(4767481-4767540)
chr8 (89-145)||(7918791-7918847)
chr8 (1-41)||(15180646-15180686)
chr8 (69-145)||(27049363-27049438)
chr8 (1-56)||(29818867-29818925)
[»] scaffold0050 (1 HSPs)
scaffold0050 (78-134)||(58749-58805)
[»] scaffold0221 (1 HSPs)
scaffold0221 (83-138)||(22234-22289)
[»] scaffold0010 (2 HSPs)
scaffold0010 (318-376)||(166646-166704)
scaffold0010 (217-290)||(166740-166814)
[»] scaffold0004 (1 HSPs)
scaffold0004 (322-376)||(338994-339048)
[»] scaffold0103 (1 HSPs)
scaffold0103 (78-113)||(52005-52040)
[»] scaffold0024 (1 HSPs)
scaffold0024 (97-138)||(21311-21352)
[»] scaffold0147 (1 HSPs)
scaffold0147 (89-133)||(23639-23683)


Alignment Details
Target: chr3 (Bit Score: 333; Significance: 0; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 411
Target Start/End: Complemental strand, 32582884 - 32582479
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagttttagactgtttgggagaactcatgaaaacagtgacatcgttcaaaagcttttttcaacttat 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  32582884 tggattgacttatttgagtttatctactaccataagttttagactgtttgggagaactcatgaaaacagtgacattgttcaaaagattttttcaacttat 32582785  T
Q  101 ttccataagttctccaaaatagcttatgaaaacagcttgtagcttttgatgnnnnnnnttgcggataatctagcctacagcggatgatttataagctacc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||    
T  32582784 ttccataagttctccaaaatagcttatgaaaacagcttgtagcttttgat-aaaaaaattgcggataatctagcctatagcggatgatttataagctacc 32582686  T
Q  201 ttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtcaagtagcttataagtatgaaatgacataaaaagaggtt 300  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32582685 ttagagctgatagctgataacctagttgattgaatttgtagtgtttggtaaaattagccgtgaagtagcttataagtatgaaatgacataaaaagaggtt 32582586  T
Q  301 catttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagctagctagttgaactgccttatcaaaa 400  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||    
T  32582585 caattaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag----ctagttgaactgccttatcaaaa 32582490  T
Q  401 aaggctataag 411  Q
    |||||||||||    
T  32582489 aaggctataag 32582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 32582392 - 32582322
Alignment:
Q  407 ataagttataagtcaaaaacatgtcttaccaaacagaccctatgaagagagcttataacttgcaagaaaac 477  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32582392 ataagctataagtcaaaaacatgtcttaccaaacagaccctatgaagagagcttataacttacaagaaaac 32582322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 21367814 - 21367674
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttta---gactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| |||||||||| |||||||| | ||||||||||    ||||||||||||||||| ||||||||||    |||||| ||||| ||||| |||||    
T  21367814 tggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttc 21367715  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    | ||||||| |||||||||||||| ||||||||||||||||    
T  21367714 agcttattttcataagttctccaagatagcttatgaaaaca 21367674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 376
Target Start/End: Original strand, 32325975 - 32326167
Alignment:
Q  191 ataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttat----aagtatgaaatg 285  Q
    |||||||| |||| |||| ||||  ||||| ||||||||| |||||| |||||||||||||||||||  ||  || ||||||||    || |||||||||    
T  32325975 ataagctagcttatagctaatagtggataagctagttgatggaatttgtagtgtttggtaaaattagtagttgaactagcttatttataattatgaaatg 32326074  T
Q  286 acataaaaagaggttcatttaagtaacattta---ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||  | |  |||||| ||| |||||   |||||||||||||||||||| |||||||||||| ||||| | |||||||||||||||||    
T  32326075 acataaaaat-gatatatttaattaatatttaattttttttcaattaagattgcaggggtaaaattgatataaataatgataagctataagcta 32326167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 39980876 - 39980727
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| ||| ||||||||||||||||| ||||||||||   |||||||||  ||||||| ||||||||||    ||||    |||| |||||||||||    
T  39980876 tggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagcttttttc 39980777  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    ||||||||| |||||||||||||| ||||||||| |||||| ||| ||||    
T  39980776 aacttattttcataagttctccaatatagcttataaaaacaacttatagc 39980727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 13799984 - 13800038
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13799984 ttttttcaattaagattgcaggggtaaaattgagataaaaagtgataagctataa 13800038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20880623 - 20880482
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtt---ttagactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| ||||||||||||||||||||  ||||||||   ||||||| |||||||||||  ||||||||||    |||||   |||| ||||||||||     
T  20880623 tggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttttttg 20880524  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    | ||||||| |||||||||||||| ||||||| | |||||||    
T  20880523 agcttattttcataagttctccaatatagcttttaaaaacag 20880482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 211 - 376
Target Start/End: Complemental strand, 37334713 - 37334551
Alignment:
Q  211 tagctgataacctagttgatcgaatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatgaaatgacataaaaagaggttcatttaagt 309  Q
    |||| ||||| ||||||||| |||| |  |||||||| ||||||||||   | ||||||| ||||| |||||||||||||  ||| | || |||| || |    
T  37334713 tagcagataagctagttgattgaatatgcagtgtttgataaaattagcgactaaagtagcatataaatatgaaatgacatcgaaa-atgtgcattaaatt 37334615  T
Q  310 aacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    || ||||   |||||||||||||||||| || |||||||||||||||||| || |||||||||||||    
T  37334614 aatattt---ttttcaattaagattgcacggataaaattgagataaaaagcgaaaagctataagcta 37334551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 37273186 - 37273140
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  37273186 ttttcaacttatttccataagttctccaagatagcttatgaaaacag 37273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 402469 - 402609
Alignment:
Q  5 ttgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaact 97  Q
    ||||| |||||||| ||||| |||| ||||||||||   |||||||||||||||||  ||||||||||    |||||| ||||| ||||| |||||| ||    
T  402469 ttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacattgttcataagctgttttcagct 402568  T
Q  98 tatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    || || || ||||||| ||| |||| |||| ||||||||||    
T  402569 taatttcacaagttcttcaagatagattataaaaacagctt 402609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 43822649 - 43822592
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||||||    
T  43822649 ttttttcaattaggattgcaggggtaaaatggagataaaaagtgacaagctataagct 43822592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 44539253 - 44539192
Alignment:
Q  313 atttattttt-tcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  44539253 atttatttttgtcaattaagattgcaagggtaaaatggagataagaagtgataagctttaag 44539192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 901982 - 901931
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  901982 aagcttttttcaacttattttcataagttctccaatatagcttataaaaaca 901931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 143
Target Start/End: Complemental strand, 30444029 - 30443891
Alignment:
Q  12 atttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttcc 104  Q
    |||||||||||||||||  ||||| |||    ||||||||||| ||| || ||||||||||    |||||   |||| |||||||||||| ||||||| |    
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttc 30443930  T
Q  105 ataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    ||||||||||||| |||| |||| |||||||||| ||||    
T  30443929 ataagttctccaatatagtttataaaaacagcttatagc 30443891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 1384307 - 1384249
Alignment:
Q  317 attttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||||| ||||||||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  1384307 atttttccaattaagattgcagcggtaaaaatgagataaaaagtgataagttataagct 1384249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 2948876 - 2948930
Alignment:
Q  322 ttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||    
T  2948876 ttcaattaagattgcaaggataaaatttagataaaaaataataagctataagcta 2948930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 18405754 - 18405903
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacagt----gacatcgttcaaaagcttttttc 93  Q
    |||||||  |||||||||||||||||||  ||||||||||   ||||||||||  |||||| |||||||||||    ||||   |||| || ||||||      
T  18405754 tggattggtttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttca 18405853  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    | |||| || |||||||||||||| |||||||||||||||| ||| ||||    
T  18405854 agcttaatttcataagttctccaagatagcttatgaaaacaacttatagc 18405903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 584193 - 584122
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtt---ttagactgtttgggagaactcatgaaaacag 69  Q
    ||||||||||||||||||||||||||||| ||||||||   | ||||||||| |||||| | ||||||||||    
T  584193 tggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacag 584122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 3845577 - 3845634
Alignment:
Q  86 cttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    ||||||||| ||||||| |||||||||||||| ||| |||||||||||||| ||||||    
T  3845577 cttttttcagcttattttcataagttctccaagataacttatgaaaacagcatgtagc 3845634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 35394497 - 35394562
Alignment:
Q  70 tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||| ||||| ||||| |||||||||||||| ||||| |||| ||| |||||||||||||||||    
T  35394497 tgacattgttcataagctgttttcaacttattttcataaattcttcaagatagcttatgaaaacag 35394562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 39602228 - 39602277
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  39602228 ttttcaacttattttcataagttctcaaagatagcttatgaaaacagctt 39602277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 50600191 - 50600252
Alignment:
Q  84 agcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||| |||||| ||||||| |||||||||||||| |||||| ||||||||||||| ||||||    
T  50600191 agctgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttatagctt 50600252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 26990503 - 26990563
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||||||||| ||||||| |||||||||||| | |||||||| ||||||| ||||||||    
T  26990503 aagcttttttcagcttattttcataagttctccgagatagcttaggaaaacaacttgtagc 26990563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 44747420 - 44747480
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||| ||||| ||||||| |||||||| ||||| |||||||||||||||||||| ||||    
T  44747420 aagcttctttcagcttattttcataagttttccaagatagcttatgaaaacagcttatagc 44747480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 23816086 - 23816047
Alignment:
Q  105 ataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  23816086 ataagttctccaaaatagcttatgaaaacagcttctagct 23816047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 24158519 - 24158570
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| ||||||||||||||||| ||||||  ||||||||||||||||||||    
T  24158519 tttttgcaacttatttccataagctctccaggatagcttatgaaaacagctt 24158570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31365111 - 31365225
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| |||||||||||||||||| |  ||||||||||   |||||||||||||||||| |||||| |||    |||||   |||| |||||||||||    
T  31365111 tggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttc 31365210  T
Q  94 aacttatttccataa 108  Q
    |||| |||| |||||    
T  31365211 aactcattttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 35696296 - 35696245
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  35696296 aagcttttttcaacttattttcacaagttctccaatatagcttataaaaaca 35696245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 47132389 - 47132338
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||| ||||||    
T  47132389 aagcttttttcaacttattttcataacttctccaatatagcttataaaaaca 47132338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 375
Target Start/End: Complemental strand, 34778435 - 34778279
Alignment:
Q  215 tgataacctagttgatcgaatttatagtgtttggtaaaattagccgtcaa--gtagcttataagtatgaaatgacataaaaagaggttcatttaagtaac 312  Q
    |||||| ||||||||  |||||| ||||||||| |||||||||| || ||  ||||||||||| ||| |||| |||| |||| | ||       | |||     
T  34778435 tgataagctagttgaatgaatttgtagtgtttgataaaattagcagttaaaagtagcttataaatataaaattacattaaaaaaagt-------attaat 34778343  T
Q  313 atttatttttt-caattaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    ||||||||||| |||||||||||||| |||||||||| |||  |||| |||||| |||||||||    
T  34778342 atttatttttttcaattaagattgcaggggtaaaattaagaagaaaattgataatctataagct 34778279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 36293299 - 36293356
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||||||||| ||||||| |||||| ||| ||||| |||||||||||||||||    
T  36293299 ttttttcaattaagatagcaagggcaaaatttagagaaaaa-tgataagctataagcta 36293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 466251 - 466202
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    |||||||||| | ||||||| |||||||||||||| ||||||||||||||    
T  466251 aagctttttttagcttattttcataagttctccaacatagcttatgaaaa 466202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 2719513 - 2719464
Alignment:
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||| |||||||||||||| ||||||||||||||||| || ||||||    
T  2719513 cttattttcataagttctccaagatagcttatgaaaacagtttatagctt 2719464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 20669236 - 20669175
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| ||||| |||||  ||||||| |||||| ||||||| ||||||||||||||||||||    
T  20669236 gttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagctt 20669175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 36631058 - 36631123
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    ||||||||||||||||  ||||||| |||||||||||||| |||||| || |||||| ||| ||||    
T  36631058 ttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagc 36631123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 41633412 - 41633363
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| ||||||| |||||| |||||||||||||| |||||||||||||    
T  41633412 ttttcagcttattttcataagctctccaaaatagctgatgaaaacagctt 41633363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 14548739 - 14548795
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||||||||| |||||| |||| |||||||||||| ||| ||||||    
T  14548739 ttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagctt 14548795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 24280763 - 24280707
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||||||||||| |||||| ||||||  ||||||||||| |||||||| ||||||    
T  24280763 ttttcaacttattttcataagctctccatgatagcttatgacaacagcttatagctt 24280707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 24887301 - 24887357
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||| ||||||| ||||||  |||||||||||||||||||| ||||||    
T  24887301 ttttcagcttattcccataagctctccaggatagcttatgaaaacagcttttagctt 24887357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 33972749 - 33972797
Alignment:
Q  86 cttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||||||| ||||||| || ||||||||||||||||||||| ||||||    
T  33972749 cttttttcagcttattttcacaagttctccaaaatagcttataaaaaca 33972797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 26542589 - 26542546
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    ||||||||||||||||||||  |||||| |||||||||||||||    
T  26542589 ttttcaacttatttccataaactctccataatagcttatgaaaa 26542546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 28622006 - 28622073
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||| ||||| ||||||  |||||| ||||||||||| || |||| ||||||||||||||| ||||||    
T  28622006 ttcataagctgttttcaggttattttcataagttctcgaagatagtttatgaaaacagcttatagctt 28622073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 32645852 - 32645801
Alignment:
Q  325 aattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||| |  |||||||| |||||||||||||||||||| |||||||    
T  32645852 aattaagattggagtggtaaaatggagataaaaagtgataagctttaagcta 32645801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 37243741 - 37243678
Alignment:
Q  313 atttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||| |||||| ||||||||||||| |||||||||  ||||||||| | |||| ||||||||||    
T  37243741 atttttttttttaattaagattgcaggggtaaaatgaagataaaaaattataaactataagcta 37243678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 41452581 - 41452526
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| |||||| |||||||||| || |||||||  ||||||||||||||||||||    
T  41452581 aagctgttttcaccttatttccacaacttctccaggatagcttatgaaaacagctt 41452526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 43046809 - 43046741
Alignment:
Q  3 gattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    ||||||||||||||| |||||||| ||| ||| |||||   |||||||||||||||||| ||||||||||    
T  43046809 gattgacttatttgaacttatctattac-atatgttttgtgagactgtttgggagaacttatgaaaacag 43046741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 44488935 - 44488892
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    |||||| ||||||||||||||||||| || ||||||||||||||    
T  44488935 ttttcagcttatttccataagttctctaagatagcttatgaaaa 44488892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 46478752 - 46478713
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaa 117  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  46478752 ttcataagcttttttcaacttattttcataagttctccaa 46478713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 46886718 - 46886765
Alignment:
Q  97 ttatttccataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    |||||| || ||||||||||| |||||||||||||||||||| |||||    
T  46886718 ttattttcaaaagttctccaagatagcttatgaaaacagcttatagct 46886765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 49465681 - 49465728
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| | |||||||||||||||||||||  ||||||||||||||||    
T  49465681 ttttttaagcttatttccataagttctccagtatagcttatgaaaaca 49465728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 132
Target Start/End: Original strand, 34254827 - 34254869
Alignment:
Q  90 tttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||    
T  34254827 tttcagcttatttacataagttctccagaatagcttatgaaaa 34254869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 37083961 - 37083903
Alignment:
Q  319 tttttcaattaagattgcaagggtaaaattgagataaaaa-gtgataagctataagcta 376  Q
    |||||||||||||  | |||||||||||||| ||||||||  |||||||||||||||||    
T  37083961 tttttcaattaaggctacaagggtaaaattgtgataaaaatatgataagctataagcta 37083903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 38902201 - 38902083
Alignment:
Q  12 atttgagcttatctactaccataagtttt--agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttcca 105  Q
    |||||||||||||||||  ||||||||||  | ||||||||| |||| | ||||||||||    |||||| ||||| | | | |||||||||||||| ||    
T  38902201 atttgagcttatctactggcataagttttgcaaactgtttggaagaatttatgaaaacagcatatgacattgttcatacgttgttttcaacttattttca 38902102  T
Q  106 taagttctccaaaatagct 124  Q
    | |||||| ||| ||||||    
T  38902101 tgagttcttcaagatagct 38902083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 39311695 - 39311749
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgta 141  Q
    |||||||| |||||||||||||  ||||||  |||||||||||||||| ||||||    
T  39311695 ttttttcatcttatttccataaactctccagtatagcttatgaaaacaccttgta 39311749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 43822787 - 43822713
Alignment:
Q  179 agcggatgatttataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaa 253  Q
    ||||||||| | |||||||| |||| |||||||||| ||||| |||| | || ||||||  ||||||||||||||    
T  43822787 agcggatgactgataagctagcttatagctgatagcggataaactagctaattgaatttgaagtgtttggtaaaa 43822713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 48528608 - 48528558
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttg 139  Q
    |||||| |||||||| ||||  |||||| ||||||||||||||||||||||    
T  48528608 ttttcagcttatttctataaactctccagaatagcttatgaaaacagcttg 48528558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 358
Target Start/End: Original strand, 1265363 - 1265444
Alignment:
Q  277 tatgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaa 358  Q
    |||||||||||||||||| | ||  |||||| | | ||| |||||||||||||| ||| || ||| |||||||| |||||||    
T  1265363 tatgaaatgacataaaaaaatgtatatttaattcatattaattttttcaattaaaattacaggggcaaaattgaaataaaaa 1265444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 20170586 - 20170521
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| |||||||||||||||||||| ||| ||||||| |||||| ||| | |||||| ||| ||||    
T  20170586 ttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaacaacttatagc 20170521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 22203474 - 22203437
Alignment:
Q  97 ttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  22203474 ttattttcataagttctccaagatagcttatgaaaaca 22203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24085261 - 24085332
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    ||||||| |||||||||||||||||||   ||||||||||   |||||| || |||||||| ||||||||||    
T  24085261 tggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacag 24085332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 31534457 - 31534514
Alignment:
Q  278 atgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattg 335  Q
    |||||||||||||| || | || ||||||| ||| ||||||||||| |||||||||||    
T  31534457 atgaaatgacataacaaaaagtgcatttaattaatatttatttttttaattaagattg 31534514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 33405200 - 33405241
Alignment:
Q  104 cataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||||||| ||| |||||||||||||||||||| ||||||    
T  33405200 cataagttcttcaagatagcttatgaaaacagcttatagctt 33405241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Complemental strand, 38053666 - 38053581
Alignment:
Q  210 atagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtcaag-tagcttataagtatgaaatgacataaaaa 294  Q
    |||| |||||| |||| | ||||||| |  ||||||| ||||||||||| ||  || |||||||||| ||||||||||||||||||    
T  38053666 atagttgataagctagctaatcgaatatggagtgtttagtaaaattagcagttgagatagcttataaatatgaaatgacataaaaa 38053581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 53789468 - 53789533
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| |||||||||||| |||| || |||||||||||||  ||||||||||| |||| ||| ||||    
T  53789468 ttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttatagc 53789533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 32109957 - 32109889
Alignment:
Q  227 tgatcgaatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatgaaatgacataaaaa 294  Q
    |||| ||||| ||||||||||||||||||||  | | || |||||||||  ||||||||||||||||||    
T  32109957 tgattgaattcatagtgtttggtaaaattagtggcttaactagcttatatatatgaaatgacataaaaa 32109889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 34235019 - 34235055
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt 40  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  34235019 attgacttattcgagcttatctactaacataagtttt 34235055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 36783340 - 36783400
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    ||||| ||||| |||||| ||||| | ||||| | |||||| |||||||||||||||||||    
T  36783340 gttcataagctgttttcagcttatattcataattgctccaatatagcttatgaaaacagct 36783400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 41644452 - 41644512
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||| ||||| |||||| ||||||||| |||| |||| |  ||||||||||||||||||||    
T  41644452 ttcataagctgttttcagcttatttccttaagatctctacgatagcttatgaaaacagctt 41644512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 42747709 - 42747775
Alignment:
Q  5 ttgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaaca 68  Q
    |||||||||||||| ||||||||| |||||||| ||   |||||||||  ||||||| |||||||||    
T  42747709 ttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaaca 42747775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 44284092 - 44284144
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    ||||| |||||| |||||||| ||||| ||||||  |||||||||||||||||    
T  44284092 aagctattttcagcttatttctataagctctccaggatagcttatgaaaacag 44284144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 190 - 376
Target Start/End: Complemental strand, 34640281 - 34640093
Alignment:
Q  190 tataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtcaa-gtagcttataagtatgaaatgaca 288  Q
    ||||||||| |||| |||||||||| ||||| |||| | || |||||| || ||||||||||||||||  || |  ||||||||||| ||||||||||||    
T  34640281 tataagctagcttatagctgatagcggataagctagcttattgaatttgtaatgtttggtaaaattagtggttattgtagcttataaatatgaaatgaca 34640182  T
Q  289 taaaaagaggttcatttaagtaacatttattttttcaattaagattgcaa-gggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||   || |||| || ||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  34640181 taaaaaattgtgcattaaattaatatttattttttcaattgagattgcaaggggtaaaattgagataaaaagtgataaactataagcta 34640093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 247 - 376
Target Start/End: Original strand, 1621438 - 1621570
Alignment:
Q  247 ggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagag-gttcatttaagtaacatttatttt-ttcaattaagattgcaagggta 343  Q
    |||||||||||| ||  ||||||||||||| |||||||||||||||||| |  ||  |  ||| ||| ||||||||| ||||||||||||||||||||||    
T  1621438 ggtaaaattagcggttgaagtagcttataaatatgaaatgacataaaaaaaatgtatacataattaatatttatttttttcaattaagattgcaagggta 1621537  T
Q  344 aaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||||||| |||||||||||||||||    
T  1621538 aaattgagataaaaactgataagctataagcta 1621570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 249 - 375
Target Start/End: Complemental strand, 32882909 - 32882785
Alignment:
Q  249 taaaattagccgtcaagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacattta-ttttttcaattaagattgcaagggtaaaat 347  Q
    |||||||||| || ||||||||||||| ||||||||||||||||||| |||  | |||| ||| ||||| |||||||||||||||||||| |||||||||    
T  32882909 taaaattagc-gtgaagtagcttataaatatgaaatgacataaaaag-ggtata-ttaattaatatttatttttttcaattaagattgcaggggtaaaat 32882813  T
Q  348 tgagataaaaagtgataagctataagct 375  Q
    ||||||||||||||| ||||| ||||||    
T  32882812 tgagataaaaagtgagaagctgtaagct 32882785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 376
Target Start/End: Complemental strand, 2942170 - 2941982
Alignment:
Q  191 ataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacat 289  Q
    |||||||| |||| |||||||||| ||||| ||||||| | |||||| ||| |||||||||||||||  ||  || || ||||||| ||| |||||||||    
T  2942170 ataagctagcttatagctgatagcggataagctagttggttgaatttgtagggtttggtaaaattagtggttgaactaacttataaatataaaatgacat 2942071  T
Q  290 aaaaagaggttcatttaagtaacattta---ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||| | | |  ||||||  || |||||   ||||||||||||||||| |||||||||||||||||||||   ||||||||| |||||||    
T  2942070 aaaa-gtgatatatttaatgaatatttaattttttttcaattaagattacaagggtaaaattgagataaaggatgataagctctaagcta 2941982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 16937806 - 16937955
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| ||||||||||||||||||||| ||||||||||   ||| ||||||| |||||| ||||||||||    |||||   |||| |||||||||||    
T  16937806 tggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagcttttttc 16937905  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    | ||||||| | |||||||||||| ||||| ||| |||||| ||| ||||    
T  16937906 agcttattttcctaagttctccaatatagcgtataaaaacaacttatagc 16937955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9202671 - 9202815
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||||||||||||||||||||| ||  ||||||||||   ||||| ||| ||| |||| ||| ||||||    |||||| ||||| ||||| ||| |    
T  9202671 tggattgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctgtttcc 9202770  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    | ||||||| |||||||||| ||| ||| ||||||||||||||||    
T  9202771 agcttattttcataagttcttcaagataacttatgaaaacagctt 9202815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 241 - 373
Target Start/End: Original strand, 32826650 - 32826785
Alignment:
Q  241 gtgtttggtaaaattagccgtcaa--gtagcttataagtatgaaatgacataaaaagag-gttcatttaagtaacatttatttt-ttcaattaagattgc 336  Q
    ||||||| ||||||||||||| ||  ||| ||||||| ||| |||||| |||||||||  || || |||| ||| ||||||||| |||||||||||| |     
T  32826650 gtgtttgataaaattagccgttaaaagtaacttataa-tataaaatgatataaaaagaaagtgcaattaattaatatttatttttttcaattaagatggt 32826748  T
Q  337 aagggtaaaattgagataaaaagtgataagctataag 373  Q
    | |||||||||||||||| ||||||||||||||||||    
T  32826749 atgggtaaaattgagatagaaagtgataagctataag 32826785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 375
Target Start/End: Original strand, 6462239 - 6462400
Alignment:
Q  216 gataacctagttgatcgaatttatagtgtttggtaaaattagccgtcaagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatt 315  Q
    ||||| |||| |||| |||||| |||||||| ||||||||||| |   | ||| |||||| |||||||||||| | |||  | |  |||||| ||| |||    
T  6462239 gataagctagctgattgaatttgtagtgtttagtaaaattagcggctcattaggttataaatatgaaatgacagacaaat-gctatatttaattaatatt 6462337  T
Q  316 ta---ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    ||   |||||||||| ||||||||| |||||||||||||||||| | ||||||||||||||||    
T  6462338 tagttttttttcaatcaagattgcaggggtaaaattgagataaataatgataagctataagct 6462400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 12425716 - 12425567
Alignment:
Q  5 ttgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcat--gaaaacagtg----acatcgttcaaaagcttttttcaa 95  Q
    ||||||||||||||||||||||||  ||||||||||   |||||||||||||||||| ||  |||||||       |||| ||  | ||| | |||||||    
T  12425716 ttgacttatttgagcttatctactgtcataagttttgtgagactgtttgggagaacttatatgaaaacaacctaaaacattgtcaataagttgttttcaa 12425617  T
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||| |||||||||||||| ||||||| |||||||||||| ||||||    
T  12425616 cttattttcataagttctccaagatagcttgtgaaaacagcttatagctt 12425567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 4014430 - 4014491
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| ||||| |||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  4014430 gttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagctt 4014491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 10640092 - 10639960
Alignment:
Q  9 cttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatt 101  Q
    |||||||||| |||||||||  ||||||||||   | | |||||||||||||| ||||||||||    ||||||  |||| |||||||||  | ||||||    
T  10640092 cttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataagctttttctagcttatt 10639993  T
Q  102 tccataagttctccaaaatagcttatgaaaaca 134  Q
    | ||||||||||||||||||| ||||| |||||    
T  10639992 ttcataagttctccaaaatagtttatgtaaaca 10639960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 29925978 - 29925839
Alignment:
Q  10 ttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttattt 102  Q
    ||||||| |||||||||||| || |||||||   |||| ||||||||||||| ||||||||||    |||||  |||||   | ||||||||||||||||    
T  29925978 ttatttgggcttatctactagca-aagttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattt 29925880  T
Q  103 ccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
     |||||||||||||| |||||||||| ||||| ||| ||||    
T  29925879 tcataagttctccaatatagcttatgtaaacaacttatagc 29925839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 376
Target Start/End: Complemental strand, 31677369 - 31677201
Alignment:
Q  217 ataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacat-aaaaagaggt-----tcatttaagt 309  Q
    |||| |||| |||| ||||||| |||||||||||||| |||| ||  || ||||||| || ||||||||||||| ||||| ||||     | |||||| |    
T  31677369 ataagctagctgattgaatttacagtgtttggtaaaactagcggttgaactagcttacaaatatgaaatgacatcaaaaaaaggtatatttaatttaaat 31677270  T
Q  310 aacattta--ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    || ||| |  |||||||||||||||||  | |||||||||||||||||| | |||||||||||||||||    
T  31677269 aatattgaagttttttcaattaagattagaggggtaaaattgagataaacaatgataagctataagcta 31677201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 39105562 - 39105460
Alignment:
Q  47 tttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtag 142  Q
    |||||||||| | ||||||||||    |||||| ||||| ||||| |||| | ||||||| |||||||||||||| ||||||||||||||||| || |||    
T  39105562 tttgggagaatttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatag 39105463  T
Q  143 ctt 145  Q
    |||    
T  39105462 ctt 39105460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 7985114 - 7984964
Alignment:
Q  3 gattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaa 95  Q
    ||||| || ||||||| |||||||||  |||||| |||   ||||| ||||||||| || | ||||||||    |||| | ||||| ||||| ||||||     
T  7985114 gattggctaatttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtgacgttgttcataagctgttttcag 7985015  T
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagcttgtagcttt 146  Q
    ||||||| ||||| |||||||| |||||||||||||| ||||| |||||||    
T  7985014 cttattttcataaattctccaagatagcttatgaaaaaagcttatagcttt 7984964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 15246971 - 15246837
Alignment:
Q  10 ttatttgagcttatctactaccataagtt---ttagactgtttgggagaactcatgaaaaca----gtgacatcgttcaaaagcttttttcaacttattt 102  Q
    |||||||||||||||||||  ||||||||   ||||| |||||||||||||| |||||| ||     ||||||| |||| ||| ||||| ||||||||||    
T  15246971 ttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttatgacatcattcataagttttttgcaacttattt 15246872  T
Q  103 ccataagttctccaaaatagcttatgaaaacagct 137  Q
      || | ||||| || |||||||||||||||||||    
T  15246871 ttatcatttctctaagatagcttatgaaaacagct 15246837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 41534585 - 41534437
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag-tgacatcgttcaaaagcttttttcaac 96  Q
    |||||||||||||||||||| |||||||  ||||| ||||   ||| ||||||||| ||||  ||||||||| | |   |||||| ||||| ||||||      
T  41534585 tggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacgttcataagctgttttcaga 41534486  T
Q  97 ttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||||   |||||||| ||||||||||||||||||| ||| ||||||    
T  41534485 ttatttcttcaagttctcaaaaatagcttatgaaaacaacttatagctt 41534437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9107237 - 9107166
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    |||||||||||||||||| ||||||| |  ||||||||||   ||| |||||||||||||||||||||||||    
T  9107237 tggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacag 9107166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 28777064 - 28776991
Alignment:
Q  70 tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||| |||||||| || |||| | ||||||| ||| |||||||||| |||||||||||||||||||| ||||    
T  28777064 tgacattgttcaaaaactatttttatcttattttcattagttctccaagatagcttatgaaaacagcttatagc 28776991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 37954743 - 37954686
Alignment:
Q  84 agcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgta 141  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||| |||||| ||||||    
T  37954743 agcttttttcaacttattttcatatgttctccaatatagcttataaaaacaacttgta 37954686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 6183496 - 6183440
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||||||||| ||||||||| |||||||||| ||||||| ||||||    
T  6183496 ttttcagcttatttccataagctctccaaaacagcttatgaatacagcttatagctt 6183440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 41419466 - 41419316
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    |||||||||||||||||||| |||||||  ||||| ||||   ||| ||||||||| ||||  |||||||||    |||||| |||||  |||| |||||    
T  41419466 tggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacattgttcatgagctattttc 41419367  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |  |||||||  |||| |||| ||||||||||||||||||| ||| ||||||    
T  41419366 agattatttcattaag-tctcaaaaatagcttatgaaaacaacttatagctt 41419316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 9004936 - 9004877
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagata-aaaagtgataagctataagcta 376  Q
    ||||| ||||||||||||||  ||||||||||||||| ||||||||| ||||||||||||    
T  9004936 tttttccaattaagattgcagaggtaaaattgagataaaaaagtgattagctataagcta 9004877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 11095502 - 11095545
Alignment:
Q  102 tccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||    
T  11095502 tccataagttctccagaatagcttatgaaaacaacttgtagctt 11095545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 376
Target Start/End: Complemental strand, 18337010 - 18336861
Alignment:
Q  227 tgatcgaatttatagtgtttggtaaaattagccgt-caagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttatttttt-c 324  Q
    |||| |||||| |||| |||| | |||||||| || |||||||||| ||| |||   |||||||||||| | || ||||||  ||| ||||||||||| |    
T  18337010 tgatggaatttgtagtatttgatgaaattagcggttcaagtagcttttaaatattggatgacataaaaa-atgtgcatttagttaatatttatttttttc 18336912  T
Q  325 aattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||| ||||| ||||||| | |||||||||||||||||| | |||||||    
T  18336911 aattaaggttgcatgggtaaa-tggagataaaaagtgataagttttaagcta 18336861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 33533557 - 33533612
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||| ||| |||||    
T  33533557 ttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatagct 33533612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 42100382 - 42100307
Alignment:
Q  70 tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||||| | |||||| ||||||| ||||||||||| ||||||||||| |||| | |||| ||||||    
T  42100382 tgacatagttcaaaaggtgttttcatcttattttcataagttctcaaaaatagcttacgaaatccgcttatagctt 42100307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7705921 - 7706054
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||||||||||||||| ||||||||| ||||||||||   |  || |||||||||||| ||||||||||    |||||   ||||   |||||||||    
T  7705921 tggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctgcttttttc 7706020  T
Q  94 aacttatttccataagttctccaaaatagcttat 127  Q
      ||||||| || ||||||||||| |||||||||    
T  7706021 ggcttattttcacaagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 16869908 - 16869966
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||| ||||||||  || ||||||||||||||| ||||||| |||||||||||||||||    
T  16869908 ttttctcaattaaagttacaagggtaaaattgaaataaaaaatgataagctataagcta 16869966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 37588372 - 37588434
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||| |||||||||||||| |||||| |||| |||||||||||| ||| ||||||    
T  37588372 aagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagctt 37588434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 41052920 - 41052874
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  41052920 tttttaacttatttccataagctctccaaaataggttatgaaaacag 41052874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 372
Target Start/End: Complemental strand, 17259632 - 17259525
Alignment:
Q  266 tagcttataagtatgaaatgacataaaaagaggttcatttaagtaacattta--ttttttcaattaagattgcaagggtaaaattgagataaaaagtgat 363  Q
    ||||||||||||||||||||||||||||| || |  |||||| ||| | |||  ||||||||||||||  | |||| ||||| ||||||| |||| ||||    
T  17259632 tagcttataagtatgaaatgacataaaaa-agatatatttaattaatacttaatttttttcaattaaggctacaagtgtaaatttgagatgaaaaatgat 17259534  T
Q  364 aagctataa 372  Q
    ||| |||||    
T  17259533 aagttataa 17259525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 357
Target Start/End: Complemental strand, 19397589 - 19397500
Alignment:
Q  269 cttataagtatgaaatgacataaaaagaggttcatttaagtaacatttattt-tttcaattaagattgcaagggtaaaattgagataaaa 357  Q
    ||||||| |||||||||||||||||| |     |||||| ||| |||||||| ||| ||||||||  |||||||||||||||||||||||    
T  19397589 cttataaatatgaaatgacataaaaaaaaaaatatttaattaatatttatttgttttaattaagacggcaagggtaaaattgagataaaa 19397500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 36638811 - 36638750
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| |||||||||||| |||||||||||||| |||| |  ||| ||||||||||||||||    
T  36638811 gttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaacagctt 36638750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 37611221 - 37611278
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||| ||||| ||||||  ||||||||||||| ||||||| ||||||||||||||||    
T  37611221 gttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37611278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 37787951 - 37788008
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||| ||||| ||||||  ||||||||||||| ||||||| ||||||||||||||||    
T  37787951 gttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37788008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 39594954 - 39594883
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtt---ttagactgtttgggagaactcatgaaaacag 69  Q
    |||||||||||||||||||||||||||   ||||||||   ||||| ||||||||| |||| ||||||||||    
T  39594954 tggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacag 39594883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 366
Target Start/End: Complemental strand, 1015071 - 1014969
Alignment:
Q  263 aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttat-tttttcaattaagattgcaagggtaaaattgagataaaaagtg 361  Q
    |||||||| |||  |||||||||||||||||| | || ||||||| ||| |||||| ||||  || |||||||||| |||| |||||||||||||||||     
T  1015071 aagtagctcatagatatgaaatgacataaaaa-atgtacatttaattaatatttatcttttaaaactaagattgcaggggt-aaattgagataaaaagtt 1014974  T
Q  362 ataag 366  Q
    |||||    
T  1014973 ataag 1014969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 12975398 - 12975343
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||||||| ||||||    
T  12975398 ttttcaacttatt-ccataagctctccaagatagcttatgaacacagcttatagctt 12975343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 28363530 - 28363490
Alignment:
Q  336 caagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  28363530 caagagtaaaattgagataaaaaatgataagctataagcta 28363490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 32009751 - 32009699
Alignment:
Q  82 aaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||||||||| ||||| ||| |||||||||||||| ||||||||| ||||||    
T  32009751 aaagcttttttgaacttgttttcataagttctccaatatagcttataaaaaca 32009699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32010092 - 32010022
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagt---tttagactgtttgggagaactcatgaaaaca 68  Q
    |||||||||||||||||| |||||||||  |||||||   || |||||||||| ||||||| |||||||||    
T  32010092 tggattgacttatttgagtttatctactcacataagtttcttcagactgtttgagagaacttatgaaaaca 32010022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 32172705 - 32172649
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||||||| |||||| ||  |||||||||||||||||||| ||||||    
T  32172705 ttttcagcttatttccattagttcttcatgatagcttatgaaaacagcttatagctt 32172649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 499654 - 499726
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataag----ttttagactgtttgggagaactcatgaaaacag 69  Q
    |||||||||||||||||||||| |||||  ||||||    | |||| ||||||||||||||| ||||||||||    
T  499654 tggattgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacag 499726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 1464946 - 1465076
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaac 96  Q
    ||||||||||||||||||| || ||| |||||||| |   |||||||| ||||||||| ||||||||||    || ||| | ||| ||| | |||||| |    
T  1464946 attgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 1465045  T
Q  97 ttatttccataagttctccaaaatagcttat 127  Q
    |||||| || |||| |||||| |||||||||    
T  1465046 ttattttcacaagtcctccaagatagcttat 1465076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 4619808 - 4619713
Alignment:
Q  43 actgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    ||||||||||||| || |||||||||     |||||| ||||| |||||  ||||| |||||||||||||||||||||  |||||||||||| ||||    
T  4619808 actgtttgggagagcttatgaaaacaactaatgacat-gttcataagctggtttcaccttatttccataagttctccatgatagcttatgaagacag 4619713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 7319033 - 7319072
Alignment:
Q  96 cttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  7319033 cttattttcataagttctccaagatagcttatgaaaacag 7319072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 11684472 - 11684417
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| |||||||||||||||| |||| ||||||  |||||||||||||| |||||    
T  11684472 aagctgttttcaacttatttccgtaagctctccagcatagcttatgaaaatagctt 11684417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 12857720 - 12857771
Alignment:
Q  86 cttttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| ||| |||||    
T  12857720 cttttttcagcttattttcataagttctccaatatagcttataaaatcagct 12857771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 375
Target Start/End: Complemental strand, 17902770 - 17902715
Alignment:
Q  320 ttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||| |||||||||  ||||||| ||||||||| ||||| ||||||||||||||||    
T  17902770 ttttaaattaagataacaagggtgaaattgagagaaaaattgataagctataagct 17902715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22209747 - 22209786
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt 40  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  22209747 tggattgacttatttgagcttatctactggcataagtttt 22209786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 32942655 - 32942616
Alignment:
Q  104 cataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  32942655 cataagttctccaagatagcttatgaaaacagcttatagc 32942616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 35095804 - 35095855
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgt 140  Q
    ||||||||||||||||||||| | | ||| |||||| |||||||||||||||    
T  35095804 ttttcaacttatttccataagctttacaagatagctcatgaaaacagcttgt 35095855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 36318832 - 36318781
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||| |||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  36318832 aagctgttttcagcttatttacataaattctccaagatagcttatgaaaaca 36318781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 42500258 - 42500297
Alignment:
Q  88 tttttcaacttatttccataagttctccaaaatagcttat 127  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  42500258 tttttcaacttattttcataagttctccaatatagcttat 42500297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1773029 - 1773098
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    ||||||| ||||||| |||||||||||| |||||||||||   ||||||  |||||||||| ||||||||||    
T  1773029 tggattggcttattttagcttatctacttccataagttttgtgagactg--tgggagaacttatgaaaacag 1773098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 4620235 - 4620189
Alignment:
Q  99 atttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||| ||||||||| |||||||||||||||||||| ||||||    
T  4620235 atttcgatatgttctccaacatagcttatgaaaacagcttatagctt 4620189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 12521592 - 12521542
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    ||||| ||||| |||||| |||||||||||||| ||| |||||||||||||    
T  12521592 gttcataagctgttttcagcttatttccataagctcttcaaaatagcttat 12521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 15015982 - 15015922
Alignment:
Q  9 cttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaa 66  Q
    ||||||||||||||||||||  |||||| |||   |||||||||||||||||| |||||||    
T  15015982 cttatttgagcttatctactgacataagctttgtgagactgtttgggagaacttatgaaaa 15015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 26005015 - 26005061
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||| |||||||||||||| |||||||  ||||||||||||||||    
T  26005015 ttttcaccttatttccataagctctccaagctagcttatgaaaacag 26005061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 28363605 - 28363539
Alignment:
Q  227 tgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaa 292  Q
    |||| |||||| ||||||||||||| |||||| ||  || ||| |||||||||||||||||||||||    
T  28363605 tgattgaatttgtagtgtttggtaatattagctgttgaactagtttataagtatgaaatgacataaa 28363539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 37526211 - 37526273
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||| |||||||||||||| |||||| || | |||||||||||| ||| ||||||    
T  37526211 aagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttatagctt 37526273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 3520721 - 3520654
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaaca 68  Q
    |||| |||||||||||| ||||||||  ||||||| |   |||||||||||||||||| |||||||||    
T  3520721 attggcttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaaca 3520654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 12242728 - 12242773
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| |||| ||||||||| ||||||| ||||||||||||||||    
T  12242728 ttttcagcttacttccataagctctccaagatagcttatgaaaaca 12242773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 13604867 - 13604916
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||| |||||| ||| ||| ||| ||||||||||||||||    
T  13604867 ttttcaacttattttcataagctcttcaagataacttatgaaaacagctt 13604916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 13697766 - 13697815
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    |||| ||| |||||||||||||||| ||||| |||||||| |||||||||    
T  13697766 ttcataagtttttttcaacttattttcataacttctccaacatagcttat 13697815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 17368728 - 17368683
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| |||||||||||||  ||||||| ||||||||||||||||    
T  17368728 ttttcagcttatttccataacctctccaagatagcttatgaaaaca 17368683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 24030105 - 24030170
Alignment:
Q  5 ttgacttatttgagcttatctactaccataagttttag-actgtttgggagaactcatgaaaacag 69  Q
    |||||||||||||| |||| ||||  ||||| |||||  |||||||||||||||| ||||||||||    
T  24030105 ttgacttatttgagtttatttactggcataacttttactactgtttgggagaacttatgaaaacag 24030170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 41957469 - 41957518
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| ||||||| ||||||||||| |  ||||||||||||||||||||    
T  41957469 ttttcatcttattttcataagttctcaaggatagcttatgaaaacagctt 41957518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 6587113 - 6587181
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||||| ||| || ||||||| || ||||||||||  |||||||||||||||| ||| ||||||    
T  6587113 gttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatagctt 6587181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 6588456 - 6588397
Alignment:
Q  313 atttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    ||||||||||| |||||||||| |||| ||||||||||||||||   |||||| |||||||    
T  6588456 atttatttttt-aattaagattacaagagtaaaattgagataaattatgataaactataag 6588397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 13838823 - 13838875
Alignment:
Q  321 tttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    |||||| |||||||| | |||||| |||| |||||||| ||||||||||||||    
T  13838823 tttcaactaagattgtaggggtaatattgcgataaaaaatgataagctataag 13838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 376
Target Start/End: Original strand, 24418115 - 24418259
Alignment:
Q  232 gaatttatagtgtttggtaaaattagccgt-caagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaa 330  Q
    |||||| |||||||||||||| ||||  || |||||||||||||| ||||||||||||||||||      ||||||| ||| ||||||||||| ||||||    
T  24418115 gaatttgtagtgtttggtaaa-ttagttgttcaagtagcttataaatatgaaatgacataaaaaagtaagcatttaattaatatttattttttaaattaa 24418213  T
Q  331 gattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||| |||||||||  ||||||||| |||||||||||||||||    
T  24418214 gattgcaggggtaaaataaagataaaaaatgataagctataagcta 24418259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 40174702 - 40174557
Alignment:
Q  3 gattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacagtgacatcgttcaaaagcttttttcaactta 99  Q
    |||||| ||||||||| |||||||||| ||||||||||   ||||||||||||| |||| ||||||||||  |||| || || || || |||||||||||    
T  40174702 gattgatttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaacag--acattgtccataaactgttttcaactta 40174605  T
Q  100 tttccataagttctccaaaatagcttatgaaaacagcttgtagctttt 147  Q
    ||  || |||||||||||  ||||||||||||||||||| ||||||||    
T  40174604 ttatcacaagttctccaatgtagcttatgaaaacagcttatagctttt 40174557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 373
Target Start/End: Original strand, 41963308 - 41963402
Alignment:
Q  277 tatgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    |||||||||||||||||| | || ||||||| ||  |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  41963308 tatgaaatgacataaaaaaatgtgcatttaattattatttattttttcaattaagattgca--ggtaaaattgagatacaaagtgataagctataag 41963402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 376
Target Start/End: Original strand, 47789350 - 47789523
Alignment:
Q  205 agctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttcat 303  Q
    |||||||||| ||||| |||  |||| || ||| |||||||||||||||||||| ||  |||| |||| ||| || |||||||| |||||    || |||    
T  47789350 agctgatagcggataagctaactgattgattttgtagtgtttggtaaaattagcggttgaagttgcttctaaatacgaaatgacctaaaatattgtgcat 47789449  T
Q  304 ttaagtaacatttattt-tttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||| ||| |||||||| ||||||||||||||||| |||| |||| |||||||| |||||||||||||||||||    
T  47789450 ttaattaatatttatttctttcaattaagattgcaggggttaaatggagataaatagtgataagctataagcta 47789523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 376
Target Start/End: Complemental strand, 52831704 - 52831511
Alignment:
Q  179 agcggatgatttataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagt 277  Q
    ||||||||| |||||||||| |||| |||||||    ||||||| | || || |||||| ||| ||| |||||||| |||  |  ||||||||||||| |    
T  52831704 agcggatgacttataagctagcttatagctgatcatggataaccaactt-attgaatttgtagagttcggtaaaatcagcgattgaagtagcttataaat 52831606  T
Q  278 atgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||| |||||||| | || ||||||| |||   || ||||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  52831605 atgaaatggcataaaaa-atgtgcatttaattaa---ttttttttccaattaagattgcaggggtcaaattgagataaaaaatgataagctataagcta 52831511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 17822788 - 17822937
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    |||||| |||||||||||||||||||||  |||||||| |   ||||| ||| |||||||  ||||||||||    ||||||  |||| ||||||||||     
T  17822788 tggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataagcttttttt 17822887  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    | ||||||| |||||||||||||| |||||||||||||||| ||| ||||    
T  17822888 agcttattttcataagttctccaagatagcttatgaaaacaacttatagc 17822937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 54426190 - 54426050
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| ||||||||||||||||||||  ||||||||||   |||||| ||||||||||| | ||||||||    |||||   |||| |||||||||||    
T  54426190 tggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagcttttttc 54426091  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    || |||||| |||||||||||||| |||| |||| ||||||    
T  54426090 aagttattttcataagttctccaatatagattataaaaaca 54426050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 31736049 - 31736158
Alignment:
Q  263 aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacattta-ttttttcaattaagattgcaagggtaaaattgagataaaaagtg 361  Q
    |||||||| ||||  ||||||||||||||||| | |||||||| | ||| ||||| ||||||||||||||||||  ||||||||||| ||||||||| |     
T  31736049 aagtagctcataaacatgaaatgacataaaaaaatgttcatttgattaatatttatttttttcaattaagattg-gagggtaaaatttagataaaaaatt 31736147  T
Q  362 ataagctataa 372  Q
    |||||||||||    
T  31736148 ataagctataa 31736158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 13126499 - 13126630
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| ||||||| |||||| |||||| ||||||||||   ||||||||||| |||||| || |||||||    ||||||   ||| |||||||||||    
T  13126499 tggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagcttttttc 13126598  T
Q  94 aacttatttccataagttctccaaaatagctt 125  Q
    | ||||||| ||||||||||| || |||||||    
T  13126599 agcttattttcataagttctcgaagatagctt 13126630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 35571554 - 35571705
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttta---gactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| ||||||||||||||||||||| ||||||||||    ||  |||||||||||||  | |||||||    | |||  |||||  ||||  ||||    
T  35571554 tggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagctggtttc 35571653  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||||| || |||||||| || |||||||||||||||||||| ||||||    
T  35571654 aacttattttcacaagttctctaagatagcttatgaaaacagcttatagctt 35571705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 55414427 - 55414483
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  55414427 ttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaaca 55414483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 21731579 - 21731728
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    |||||||  |||||||||| ||||||||  ||||||||||   ||| |||||||||||||| ||||||||||    | |||   |||| || ||||||||    
T  21731579 tggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaacttttttc 21731678  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||| || ||||| |||||||| ||||||||| |||||| ||| ||||    
T  21731679 aacttactttcataaattctccaatatagcttataaaaacaacttatagc 21731728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 25904150 - 25904279
Alignment:
Q  5 ttgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaact 97  Q
    |||||||||||||||||||| | |  ||||| ||||   ||||||||||||||| || ||||||||||    || |||  |||| |||||||||||| ||    
T  25904150 ttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagct 25904249  T
Q  98 tatttccataagttctccaaaatagcttat 127  Q
    |||||  ||||||||||||||| |||||||    
T  25904250 tatttttataagttctccaaaacagcttat 25904279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 49940090 - 49940161
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    |||||||||||||||||||||| || ||| ||||||||||   |||||||||| ||||||| ||||||||||    
T  49940090 tggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaacag 49940161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 825508 - 825552
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaac 133  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||    
T  825508 ttttcagcttattttcataagttctccaaaatagcttatgaaaac 825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 145
Target Start/End: Complemental strand, 1706757 - 1706618
Alignment:
Q  13 tttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttcca 105  Q
    |||||| |||||||||  ||||||||||   |||| ||||| ||||| | ||||||||||    || ||| ||||| ||||| ||| |||||||||| ||    
T  1706757 tttgagtttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataagctatttccaacttattttca 1706658  T
Q  106 taagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||| | ||||| |||| ||||||||||||||| ||||||    
T  1706657 taagctgtccaagatagtttatgaaaacagcttatagctt 1706618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 376
Target Start/End: Original strand, 20988774 - 20988834
Alignment:
Q  316 tattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||| ||||||||||  | || ||||||||||||||||| |||||||||||||||||    
T  20988774 tatttttttaattaagattaaagggttaaaattgagataaaaaatgataagctataagcta 20988834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 2996631 - 2996580
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||||||||| |||| | ||||||| ||||||||||||||||    
T  2996631 aagcttttttcaacttattttcatacgctctccaagatagcttatgaaaaca 2996580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 373
Target Start/End: Complemental strand, 52714513 - 52714370
Alignment:
Q  232 gaatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttatttttt-caatta 329  Q
    |||||||||||||| |||||||||| | | |  ||||| | |||  ||||||||||| ||||||  |||| |||||| ||| ||||||||||| ||||||    
T  52714513 gaatttatagtgttaggtaaaattaacgggtggagtagatcatagatatgaaatgacctaaaaaatggtttatttaattaatatttatttttttcaatta 52714414  T
Q  330 agattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    | ||| ||   || |||||||||||||| |||||||| ||||||    
T  52714413 aaattacataagttaaattgagataaaacgtgataagttataag 52714370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 55302307 - 55302252
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||| ||||||| |||||||| ||||| ||||||||||| ||||||||    
T  55302307 aagcttttttcagcttattttcataagttttccaacatagcttatgataacagctt 55302252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 11802592 - 11802530
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||| ||||||  |||||| |||||| ||||||||||||||||| ||||||||||    
T  11802592 aagctgttttcagcttattctcataagctctccataatagcttatgaaaacaacttgtagctt 11802530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 14011292 - 14011230
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||| |||||||||||||| ||||||| |||||||||| |||||  |||||||||    
T  14011292 aagctgttttcagcttatttccataagctctccaagatagcttatgtaaacattttgtagctt 14011230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 22030347 - 22030230
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaac 96  Q
    |||||||||||||||||| |||| || ||||||||||   || || |||||||||||| ||||||||||    |||||   ||||||||||||| |||      
T  22030347 attgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttctcagg 22030248  T
Q  97 ttatttccataagttctc 114  Q
    |||||| |||||||||||    
T  22030247 ttattttcataagttctc 22030230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 294
Target Start/End: Complemental strand, 39276600 - 39276510
Alignment:
Q  205 agctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatgaaatgacataaaaa 294  Q
    |||| |||||| ||||||||| |||| |||||| |||||||||||||||||||  | | || |||||||||| | | ||||||||||||||    
T  39276600 agctaatagcttataacctagctgattgaatttgtagtgtttggtaaaattagtggttgaactagcttataaatcttaaatgacataaaaa 39276510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 44555668 - 44555726
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||||||||||  ||| ||||||||||||||||   |||||||||||||||||    
T  44555668 ttttttcaattaagattaaaagagtaaaattgagataaatgatgataagctataagcta 44555726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 20031802 - 20031745
Alignment:
Q  88 tttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||| || |||| ||||||||||| |||||||||||||||||| |||| ||||||    
T  20031802 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagctt 20031745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 372
Target Start/End: Complemental strand, 20435587 - 20435493
Alignment:
Q  277 tatgaaatgacataaaaagaggttcatttaagtaacattta-ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    |||||||||||| ||||| | |  ||||||| ||| ||||| |||||||||| || |||| | |||||||||||||||||||||||| ||| |||||    
T  20435587 tatgaaatgacaaaaaaatatg--catttaattaatatttaattttttcaataaatattgtaggggtaaaattgagataaaaagtgacaagttataa 20435493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23319998 - 23319929
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt-agactgtttgggagaactcatgaaaacag 69  Q
    ||||||| |||||||||| |||||||||| ||||  |||| |||||||||||||||| | ||||||||||    
T  23319998 tggattggcttatttgagattatctactagcatacattttgagactgtttgggagaagttatgaaaacag 23319929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24169410 - 24169270
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| |||||| ||| |||||||||  ||||||||||   ||||| |||| |||||||  | |||| ||    ||||||  |||| ||| |||||||    
T  24169410 tggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattttttc 24169311  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||||||| |||||| ||||||| ||||||| ||||||||    
T  24169310 aacttattttcataagctctccaagatagcttgtgaaaaca 24169270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 39691075 - 39691130
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt---agactgtttgggagaa 56  Q
    |||||||||||||||||||||||||| ||||||||||   |||||||||| |||||    
T  39691075 attgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaa 39691130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 50681055 - 50681145
Alignment:
Q  41 agactgtttgggagaactcatgaaaacagt----gacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    |||||||||| ||||||| |||||||||||    ||||   |||| ||||||||||||| |||||| ||||| |||||||| |||||||||    
T  50681055 agactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagcttat 50681145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 3155655 - 3155599
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||| ||| |||||| ||| |||| ||||||||||||||||||||||    
T  3155655 ttttcagcttattttcattagttcttcaagatagtttatgaaaacagcttgtagctt 3155599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 16199993 - 16200053
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| ||||| | ||||||| ||||||| |||||| |||||||||||||||||||| ||||    
T  16199993 aagccttttttagcttattttcataagtcctccaagatagcttatgaaaacagcttatagc 16200053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 29388757 - 29388622
Alignment:
Q  5 ttgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaact 97  Q
    ||||||||||||| ||||||||||| ||||||||||   ||| |||||||||||||| | |||| |||    |||||   || | | ||| |||||||||    
T  29388757 ttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaacttacgaaagcagtttatgacaatttttatatgctcttttcaact 29388658  T
Q  98 tatttccataagttctccaaaatagcttatgaaaac 133  Q
    ||||| ||||| |||||||  ||||||||| |||||    
T  29388657 tattttcataaattctccagtatagcttataaaaac 29388622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 44862991 - 44863047
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| |||||||||||||||||||| |||||||||| |||  |||||||| ||||||    
T  44862991 ttcataagcttttttcaacttatttgcataagttctacaatttagcttataaaaaca 44863047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 51379804 - 51379893
Alignment:
Q  318 ttttttcaattaa-gattgcaagggtaaaattgagataaaaagtgataagctataagct----agctagttgaactgccttatcaaaaaa 402  Q
    ||||||||||||| |||| ||||||||||||| ||| ||||| |||||||||| |||||     |||| ||||| |||||||||||||||    
T  51379804 ttttttcaattaaagattacaagggtaaaattaagagaaaaaatgataagctacaagctcaaatgctacttgaagtgccttatcaaaaaa 51379893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 53294037 - 53294107
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaaca 68  Q
    |||||||||| ||||| |||||||||||  ||| ||||||   ||||||||||||| ||||||||||||||    
T  53294037 tggattgactaatttgtgcttatctactgacatgagttttgtaagactgtttgggaaaactcatgaaaaca 53294107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15173226 - 15173283
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggaga 55  Q
    ||||||||||||||||| ||||||||||  ||||||||||   |||||||||||||||    
T  15173226 tggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggaga 15173283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27043753 - 27043792
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt 40  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  27043753 tggattgacttatttgagcttatctactgacataagtttt 27043792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 28431389 - 28431334
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    ||||||||||| ||||||||| ||||||||||   ||||||||||||||| |||||    
T  28431389 ttttcaacttacttccataagctctccaaaatgatttatgaaaacagcttatagct 28431334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 31404660 - 31404621
Alignment:
Q  317 attttttcaattaagattgcaagggtaaaattgagataaa 356  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  31404660 attttttcaattaagattacaaggataaaattgagataaa 31404621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 37713310 - 37713251
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgaga-taaaaagtgataagctataagcta 376  Q
    ||||||||||||||||  || ||||||||||||||  ||||| |||||||||||||||||    
T  37713310 ttttttcaattaagatcacaggggtaaaattgagagaaaaaaatgataagctataagcta 37713251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 40831042 - 40831092
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||||||||| ||||||||||||||  |||||||| ||||||    
T  40831042 aagcttttttcaacttattt-cataagttctccaatctagcttataaaaaca 40831092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 42121539 - 42121484
Alignment:
Q  90 tttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||||||| ||||||||||| |||||| ||||||||| ||| ||||||    
T  42121539 tttcagcttatttccacaagttctccaagatagctcatgaaaacaacttatagctt 42121484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 52259689 - 52259634
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| |||||||||||||| |||||| ||||| | ||||||||| ||||||||||    
T  52259689 aagctattttcaacttattttcataagctctcccagatagcttataaaaacagctt 52259634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 55064937 - 55064838
Alignment:
Q  43 actgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagc--ttatgaaaacagc 136  Q
    ||||||||||||||||  ||||||||     ||||||  ||||| ||||||||||| ||||||| |||||||||||||| ||| |  |||||||||||||    
T  55064937 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaagataacatttatgaaaacagc 55064838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 466713 - 466655
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||||||||  | |||||| ||| |||| ||||| |||||||||||||||||    
T  466713 ttttttcaattaagatgactagggtataatcgagagaaaaaatgataagctataagcta 466655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 942133 - 942175
Alignment:
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||  |||||||||||| |||||||||||||||||||||    
T  942133 cttatttttataagttctccataatagcttatgaaaacagctt 942175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 2592327 - 2592365
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttat 127  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  2592327 ttttcagcttatttccataagctctccaaaatagcttat 2592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 18628561 - 18628607
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||| |||||||||||||| ||||||| ||| |||||||||||||    
T  18628561 ttttcagcttatttccataagctctccaagataacttatgaaaacag 18628607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18815170 - 18815110
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaact 58  Q
    ||||||| |||||||||||||| |||||| ||||||||||   |||||||||| |||||||    
T  18815170 tggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaact 18815110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 21501730 - 21501673
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||||||| || |||||| ||||||| |||||||| | |||||||||||||||    
T  21501730 ttttttcaattaaggttacaaggggaaaattgggataaaaa-ttataagctataagcta 21501673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 26552151 - 26552209
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||||| |  | ||||||||||||||||||||||| |||||| ||||| ||||    
T  26552151 ttttttcaattacgggtacaagggtaaaattgagataaaaaatgataaactataggcta 26552209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 255
Target Start/End: Original strand, 50570225 - 50570255
Alignment:
Q  225 gttgatcgaatttatagtgtttggtaaaatt 255  Q
    |||||||||||||||||||||||||||||||    
T  50570225 gttgatcgaatttatagtgtttggtaaaatt 50570255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 50800042 - 50800103
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||| |||||||||| ||||||||||  |||||||| ||||||||||| ||||||    
T  50800042 aagctgttttcagcttatttcca-aagttctccatgatagcttaagaaaacagcttatagctt 50800103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 53673676 - 53673722
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||| ||||||| |||||| ||||||| |||||||||||||||||    
T  53673676 ttttcagcttatttacataagctctccaagatagcttatgaaaacag 53673722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 2244106 - 2244065
Alignment:
Q  86 cttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    ||||||||| ||||||| |||||||||||||| |||||||||    
T  2244106 cttttttcaccttattttcataagttctccaatatagcttat 2244065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 6466052 - 6466109
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||| ||||| ||||||||||||||||||||  |||| | ||||||||||| |||||    
T  6466052 gttcataagctattttcaacttatttccataatctctctagaatagcttatggaaaca 6466109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 17425642 - 17425683
Alignment:
Q  334 tgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||| |||||||||||||||||||||||||| | ||||||||    
T  17425642 tgcaggggtaaaattgagataaaaagtgataggttataagct 17425683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 27123370 - 27123407
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagctta 126  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  27123370 ttttcaacttatttccataagctctccataatagctta 27123407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 448
Target Start/End: Original strand, 30071637 - 30071666
Alignment:
Q  419 tcaaaaacatgtcttaccaaacagacccta 448  Q
    ||||||||||||||||||||||||||||||    
T  30071637 tcaaaaacatgtcttaccaaacagacccta 30071666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 31998437 - 31998384
Alignment:
Q  240 agtgtttggtaaaattagccgtcaagtagcttataagtatgaaatgacataaaa 293  Q
    ||||||||||||||||||| || |||| ||| |||| ||| |||||||||||||    
T  31998437 agtgtttggtaaaattagctgttaagtggctgataaatataaaatgacataaaa 31998384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 44320006 - 44319945
Alignment:
Q  84 agcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||| ||||||||| |||| ||||||||||| |  ||||||||| |||| ||||||||||||    
T  44320006 agctattttcaactaattttcataagttctctaggatagcttatcaaaatagcttgtagctt 44319945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 47800675 - 47800626
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| ||||||| |||||| ||| ||| ||||||||||||||||||||    
T  47800675 ttttcagcttattttcataagctcttcaagatagcttatgaaaacagctt 47800626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 49202714 - 49202641
Alignment:
Q  72 acatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||| ||||| ||| | |||||||||||||| ||| |||| ||||| |||||||| ||||||| ||| ||||||    
T  49202714 acattgttcataagttgttttcaacttattttcattagttatccaagatagcttacgaaaacaacttatagctt 49202641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 50662745 - 50662794
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    |||| |||||||||||||||||||| || || |||||||| |||||||||    
T  50662745 ttcataagcttttttcaacttattttcacaatttctccaatatagcttat 50662794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 52315120 - 52315260
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    |||||||||||||||||| |||||||||  | ||||||||   ||| ||||||| |||||| || ||||||     | ||||  |||| ||| |  ||||    
T  52315120 tggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttgctttc 52315219  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    | ||||||| |||||||| |||||||||||||||| |||||    
T  52315220 agcttattttcataagttttccaaaatagcttatggaaaca 52315260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 366
Target Start/End: Original strand, 55723169 - 55723234
Alignment:
Q  302 atttaagtaacatttatttt-ttcaattaagattgcaagggtaaaattgagataaaaagtgataag 366  Q
    |||||| ||| ||||||||| |||||||| || ||||  |||||||||||||| ||||||||||||    
T  55723169 atttaattaatatttatttttttcaattatgactgcagaggtaaaattgagatgaaaagtgataag 55723234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 4798578 - 4798634
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttg 139  Q
    ||||| |||| | ||||||| |||||| ||||||| |||||||||||||||| ||||    
T  4798578 aagctgttttgagcttatttgcataagctctccaagatagcttatgaaaacaacttg 4798634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 7694028 - 7694084
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||||||||  ||||||  ||| |||||||||||||||| ||||||    
T  7694028 ttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagctt 7694084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 7839368 - 7839424
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| |||||||||||||||||||| | |||||||| |||  |||||||| ||||||    
T  7839368 ttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaaca 7839424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 10365822 - 10365775
Alignment:
Q  90 tttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| |||||||||||||| ||||| ||||||| ||||||||||||||    
T  10365822 tttcagcttatttccataaggtctcc-aaatagcatatgaaaacagctt 10365775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 25487577 - 25487621
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    ||||| || ||||||||||||||||||||| ||| ||||||||||    
T  25487577 aagctgttatcaacttatttccataagttccccagaatagcttat 25487621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 25548568 - 25548596
Alignment:
Q  110 ttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||||||||||||||||||    
T  25548568 ttctccaaaatagcttatgaaaacagctt 25548596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 27611816 - 27611852
Alignment:
Q  222 ctagttgatcgaatttatagtgtttggtaaaattagc 258  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  27611816 ctagttgattgaatttgtagtgtttggtaaaattagc 27611852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 29563422 - 29563470
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    ||||||||||||| ||| |||||||| | |||||||| |||||||||||    
T  29563422 ttttcaacttattcccacaagttctctagaatagcttctgaaaacagct 29563470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 30070270 - 30070214
Alignment:
Q  319 tttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||||||||||||||| || || |||||||||||| || | |||||||| |||||||    
T  30070270 tttttcaattaagatttcatggataaaattgagatcaataatgataagccataagct 30070214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 33586962 - 33587018
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| |||||||| | ||||||||| |||||||||||| | ||||||||| ||||||    
T  33586962 ttcataagcttttcttaacttattttcataagttctccgatatagcttataaaaaca 33587018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 39691159 - 39691215
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||||||||||||| | |||||||| ||| ||||||||| |||||| ||| ||||    
T  39691159 ttttttcaacttattttcgtaagttcttcaatatagcttataaaaacaacttatagc 39691215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 50004162 - 50004210
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    |||||| ||||||| |||||||||||||| ||| |||| ||||||||||    
T  50004162 ttttcagcttattttcataagttctccaagataacttaggaaaacagct 50004210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 51630163 - 51630107
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||| ||||| |||| ||| |||||||||||||| ||||| ||||||    
T  51630163 ttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagctt 51630107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 366
Target Start/End: Original strand, 1714040 - 1714181
Alignment:
Q  227 tgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaaca-tttattttttc 324  Q
    |||| |||||| |||||||||||||||||| ||||  |||||| |||||| |||||||||||||||||| | ||  |||||| ||| | |||||||||||    
T  1714040 tgattgaatttgtagtgtttggtaaaattaaccgttgaagtagtttataaatatgaaatgacataaaaaaaagtatatttaactaataatttattttttc 1714139  T
Q  325 aattaagattgcaagggtaaaattgagataaaaagtgataag 366  Q
    | ||| ||||||| ||||||||||||||||| ||||||||||    
T  1714140 atttatgattgcatgggtaaaattgagataagaagtgataag 1714181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 376
Target Start/End: Original strand, 31117556 - 31117749
Alignment:
Q  183 gatgatttataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatga 281  Q
    ||||| |||||||||| |||| || ||| |||  |||| |||| |||| |||||| ||||||||| ||||||||||  |  || |||| ||||| |||||    
T  31117556 gatgacttataagctagcttatagttgagagcaaataagctagctgattgaatttgtagtgtttgataaaattagcgattgaaatagcatataaatatga 31117655  T
Q  282 aatgacataaaaagaggttcatttaagtaacatttatttt-ttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||| |||||   ||  |||||| ||| ||||||||| |||||||||||||| | |||||||||||||||||||| ||||| |||||||||||    
T  31117656 aatgacaaaaaaat--gtatatttaattaatatttatttttttcaattaagattgtaggggtaaaattgagataaaaattgataggctataagcta 31117749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 376
Target Start/End: Original strand, 35272452 - 35272637
Alignment:
Q  190 tataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataag-tatgaaatgac 287  Q
    ||||||||| |||| |||| ||| | ||||| |||| |||| |||||| |||||||| ||||||||| | ||  ||||| |||| ||  |||||||||||    
T  35272452 tataagctagcttatagctaataacggataagctagctgattgaatttgtagtgtttagtaaaattatcggttgaagtatcttaaaaaatatgaaatgac 35272551  T
Q  288 ataaaaagaggttcatttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    | | ||||  ||  |||||| ||| |||||||||||| |||||||||||| ||||||||||||||| |||||| |||||| ||||||||    
T  35272552 aaataaag--gtatatttaattaatatttattttttcgattaagattgcatgggtaaaattgagat-aaaagttataagccataagcta 35272637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 51929509 - 51929606
Alignment:
Q  45 tgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||| ||||||||||||    |||||   |||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  51929509 tgtttgggagaattcatgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaacagctt 51929606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 10199331 - 10199475
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataag----ttttagactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagctttttt 92  Q
    ||||||||||||||||||||||||||||| ||||||    | | | ||| |||||||||||||||||||| ||    |||||| ||||| ||| | ||||    
T  10199331 tggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacat-gttcataagttgtttt 10199429  T
Q  93 caacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    || ||||||| |||||| |||| ||||||||||||||||| |||||    
T  10199430 cagcttattttcataagctctctaaaatagcttatgaaaaaagctt 10199475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 49938892 - 49938754
Alignment:
Q  3 gattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaa 95  Q
    |||||||||||||||| |||| |  |  ||||||||||   ||| |||||||||||||| ||||||||||    |||||   ||||||||||||||||||    
T  49938892 gattgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaa 49938793  T
Q  96 cttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||||| ||||||||||| || ||||||||| ||||||    
T  49938792 cttattttcataagttctctaatatagcttataaaaaca 49938754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 3233938 - 3234087
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaaca----gtgacatcgttcaaaagcttttttc 93  Q
    |||||||||||||||||||||||||| | || ||||||||   |||||||| ||||||||| |||||||||     | |||   |||| ||| |||||||    
T  3233938 tggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagtttttttc 3234037  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
     |||||||| |||||||||||||| ||||||||| |||||| ||| ||||    
T  3234038 tacttattttcataagttctccaatatagcttataaaaacaacttatagc 3234087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 376
Target Start/End: Original strand, 22593514 - 22593660
Alignment:
Q  232 gaatttatagtgtttggtaaaattagccgt-caagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacattta--ttttttcaatt 328  Q
    |||||||||||||||| |||||||||| || | | |||||||||| |||||||||||||||||| |  |  |||||| ||| |||||  ||| |||||||    
T  22593514 gaatttatagtgtttgataaaattagcagttcgactagcttataaatatgaaatgacataaaaa-atatatatttaattaatatttaattttcttcaatt 22593612  T
Q  329 aagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||    ||||||||||  |||||||| |||||||||||||||||    
T  22593613 aagattagtggggtaaaattaggataaaaaatgataagctataagcta 22593660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50644178 - 50644248
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaaca 68  Q
    ||||||||||||||||||||||||||||| |||| |||||   |||||||||||||||||| |||||||||    
T  50644178 tggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaaca 50644248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 7941753 - 7941615
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    |||||||  ||||||||| |||||| ||| | | ||||||   ||||||||||| |||| | ||||||||||    |||||| ||||  ||||| |||||    
T  7941753 tggattggtttatttgagtttatctgctaacgtgagttttgtgagactgtttggaagaatttatgaaaacagcttatgacattgttccgaagctattttc 7941654  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  7941653 aacttattttcataagttctccgaaatagcttatgaaaa 7941615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 45975753 - 45975686
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||| ||||| |||||| ||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagctt 45975686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 2295240 - 2295100
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaac 96  Q
    |||| ||||||||||||||||||||  ||||||||||   |||||||||||||||||| ||||||||||    |||||   |||| ||||| | ||||||    
T  2295240 attggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagctctattcaac 2295141  T
Q  97 ttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    |||||| || ||||||||  | ||||||||| |||| ||||    
T  2295140 ttattttcacaagttctctgatatagcttataaaaatagct 2295100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 24915058 - 24915123
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| |||||||||||||||||||| || ||||||||||| | |||||||||||||||||| ||||    
T  24915058 ttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagc 24915123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 7583555 - 7583472
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagct--agctagttgaactgccttatcaaa 399  Q
    |||||||| ||||||||||| || ||||||||||||||||||||| ||| ||||||||  ||||| |||||||  |||||||||    
T  7583555 ttttttcatttaagattgcagggataaaattgagataaaaagtgaaaagttataagcttaagctacttgaacttacttatcaaa 7583472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 32602918 - 32602855
Alignment:
Q  313 atttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||||||||| |||||| | |||||||||  ||||||||| |||||||||||||||||    
T  32602918 atttattttttcaattcagattgtaggggtaaaatgaagataaaaattgataagctataagcta 32602855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 6102297 - 6102157
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaac 96  Q
    ||||||||||||||| ||||||||   ||||| ||||   ||| |||||||||||||| ||||||||||    ||| || ||||| ||  | |||||| |    
T  6102297 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 6102199  T
Q  97 ttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||| |||||| | ||||||||||||||||||||    
T  6102198 ttatttccataaattctcccagatagcttatgaaaacagctt 6102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 20004087 - 20004033
Alignment:
Q  322 ttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||    
T  20004087 ttcaattaagattgcaggagtaaaatcgagataaaaggtgataagctataagcta 20004033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 290
Target Start/End: Complemental strand, 32348485 - 32348407
Alignment:
Q  213 gctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtcaag-tagcttataagtatgaaatgacata 290  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| ||  || |||||||||| | ||||||||||||    
T  32348485 gctgataagctagttgattgaatttgtagtgtttggtaaaattagcggttgagctagcttataaatttgaaatgacata 32348407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 206 - 371
Target Start/End: Complemental strand, 32359405 - 32359243
Alignment:
Q  206 gctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagt-atgaaatgacataaaaagaggttcat 303  Q
    ||||||||| ||||| |||| |||| |||||| || |||||||||||||||||  |  |||||||||||||   ||||||||||| |||| | |   |||    
T  32359405 gctgatagcagataaactagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaatgtg---cat 32359309  T
Q  304 ttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctata 371  Q
    |||| ||| |||| ||| |  ||||||||||| | || |||||||||||||||||||| |||||||||    
T  32359308 ttaattaatatttttttct--aattaagattgtagggataaaattgagataaaaagtgctaagctata 32359243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 2522681 - 2522632
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  2522681 ttttcaacttatttccataaattctccagaatagtttatgaaaacagctt 2522632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 7137016 - 7137065
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  7137016 ttttcagcttattttcataagttctccaagatagcttatgaaaacagctt 7137065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 7218079 - 7218148
Alignment:
Q  76 cgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||| |||||||||||||| |||||||||||||  |||| ||||||||||| ||| ||||||    
T  7218079 cgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagctt 7218148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 12564517 - 12564562
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||    
T  12564517 ttttcagcttatttccataagttctccaagatagcttatgaaaaca 12564562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 29904890 - 29904779
Alignment:
Q  9 cttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatt 101  Q
    ||||||||||||||||||||  ||||||||||   |||||||||| ||||||| || |||||||    || ||   ||||||||||||||||| ||||||    
T  29904890 cttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttatt 29904791  T
Q  102 tccataagttct 113  Q
    | ||||||||||    
T  29904790 ttcataagttct 29904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 34290288 - 34290232
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||| |||||||||| ||| |||||||||||||||||||| ||||||    
T  34290288 ttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagctt 34290232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 41195205 - 41195257
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||||||||| ||||||| |||||||||||||| |||| ||||||||||||    
T  41195205 aagcttttttcagcttattttcataagttctccaagatagtttatgaaaacag 41195257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 6292639 - 6292496
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataag----ttttagactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagctttttt 92  Q
    ||||||||||||||||||||||||||||  ||||||    ||| ||| |||||||||||| |  | |||||||    |||||| ||||| ||||| ||||    
T  6292639 tggattgacttatttgagcttatctactgacataagcacttttgagattgtttgggagaattttt-aaaacagcttatgacat-gttcataagctgtttt 6292542  T
Q  93 caacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    || ||||||| |||||| |||||||||||| ||| ||||| |||||    
T  6292541 cagcttattttcataagctctccaaaatagtttacgaaaatagctt 6292496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 32548647 - 32548694
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||    
T  32548647 ttttttcaacttatttccataagctccccaagatagcttatgaaaaca 32548694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 35179197 - 35179142
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| |||||| ||||||| ||||||||||||| |||| ||||||||||||||||    
T  35179197 aagctgttttcagcttattttcataagttctccataataacttatgaaaacagctt 35179142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 37631566 - 37631625
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    |||| |||||||||||| ||||||| |||||||||||||| ||||||||  |||||||||    
T  37631566 ttcacaagcttttttcagcttattttcataagttctccaatatagcttacaaaaacagct 37631625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 375
Target Start/End: Complemental strand, 42747713 - 42747678
Alignment:
Q  340 ggtaaaattgagataaaaagtgataagctataagct 375  Q
    ||||||||||||||||||||||||||||||||||||    
T  42747713 ggtaaaattgagataaaaagtgataagctataagct 42747678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 43230695 - 43230822
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttta---gactgtttgggagaactcatgaaaacag--tgacatcgttcaaaagcttttttcaa 95  Q
    ||||||| | ||||||||||| ||||||  |||||||||||   || ||||| |||||| | ||||||||||  |||||   || | |||||||||||||    
T  43230695 tggattggcatatttgagcttctctactggcataagttttacgagattgtttaggagaatttatgaaaacagcttgacagtttttataagcttttttcaa 43230794  T
Q  96 cttatttccataagttctccaaaatagc 123  Q
    ||||||| ||| |||||||||| |||||    
T  43230795 cttattttcattagttctccaatatagc 43230822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 51695496 - 51695558
Alignment:
Q  72 acatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| ||||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  51695496 acattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaaca 51695558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 473227 - 473162
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| |||||||||||||||||||| |||||||||||||| | | ||||| |||||| ||| ||||    
T  473227 ttcataagcttttttcaacttattttcataagttctccaatagaacttataaaaacaacttatagc 473162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5721072 - 5721001
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttta---gactgtttgggagaactcatgaaaacag 69  Q
    ||||||| |||||||||||||| |||||  ||||||||||    ||||||||||||||||| ||||||||||    
T  5721072 tggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacag 5721001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 21516465 - 21516574
Alignment:
Q  182 ggatgatttataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatg 280  Q
    |||||| |||||||||| |||| || ||||||  ||||| |||| |||| |||||| | |||||||||||||||||  | | || |||||| ||| ||||    
T  21516465 ggatgacttataagctagcttatagatgatagtggataagctagctgattgaatttgttgtgtttggtaaaattagtggttgaaatagcttttaaatatg 21516564  T
Q  281 aaatgacata 290  Q
    ||||||||||    
T  21516565 aaatgacata 21516574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 26779943 - 26779988
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  26779943 ttttcaacttattttcataagttcttcaagatagcttatgaaaaca 26779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 33204323 - 33204382
Alignment:
Q  7 gacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatga 63  Q
    ||||||||||||||||||||||  ||||||||||   |||||||||||||||||| ||||    
T  33204323 gacttatttgagcttatctactgacataagttttgtgagactgtttgggagaacttatga 33204382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 35926608 - 35926665
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||||||||||||| || ||| |||||||||||||||| || |||||||| |||||||    
T  35926608 ttttttcaattaaggttacaatggtaaaattgagataacaaatgataagccataagct 35926665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 373
Target Start/End: Original strand, 42695409 - 42695514
Alignment:
Q  269 cttataagtatgaaatgacat-aaaaagaggttcatttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagc 367  Q
    ||||||| ||| ||||||||| ||||| | ||  |||||| ||| ||||||||||||||| |||||| ||  | |||||||||  ||||||||||||||     
T  42695409 cttataaatataaaatgacattaaaaaaatgtaaatttaattaatatttattttttcaatcaagattacatagataaaattgaattaaaaagtgataagg 42695508  T
Q  368 tataag 373  Q
    ||||||    
T  42695509 tataag 42695514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 1510317 - 1510373
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| |||||||||||||||||||| | |||||||||||| | ||||||| ||||||    
T  1510317 ttcataagcttttttcaacttattttcgtaagttctccaatagagcttataaaaaca 1510373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 14629984 - 14630040
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||||||||  ||||||| |||||||||||||| ||||| ||||||    
T  14629984 ttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagctt 14630040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15784464 - 15784410
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttggg 52  Q
    ||||| ||||||||||||||||||||||| ||||||||||   ||||||||||||    
T  15784464 tggatcgacttatttgagcttatctactaacataagttttgtaagactgtttggg 15784410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 373
Target Start/End: Original strand, 20791822 - 20791968
Alignment:
Q  232 gaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttattt-tttcaatt- 328  Q
    |||||| ||||||||||||||||| ||  |  ||||||||||||| | |||||  ||| ||||| | |||||||||| ||| |||||||| || |||||     
T  20791822 gaatttgtagtgtttggtaaaattggcgattgaagtagcttataaatgtgaaaaaacacaaaaaaatgttcatttaattaatatttatttcttccaatta 20791921  T
Q  329 --aagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
      ||||||| | ||||||||| || ||||||||||| ||| ||||||    
T  20791922 agaagattgtaggggtaaaatggaaataaaaagtgacaagttataag 20791968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 37593611 - 37593744
Alignment:
Q  5 ttgacttatttgagcttatctactaccataag----ttttagactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaac 96  Q
    ||||||||||||||||||| ||||  |||||     | ||||||||||||||| |||| ||||| |||     |||||| ||||| ||||| |||||| |    
T  37593611 ttgacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacat-gttcataagctgttttcagc 37593709  T
Q  97 ttatttccataagttctccaaaatagcttatgaaa 131  Q
    |||||| |||||| ||| |||||||||||||||||    
T  37593710 ttattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 42747803 - 42747731
Alignment:
Q  183 gatgatttataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaatt 255  Q
    ||||| ||||||||||  ||| |||||||||  ||||| |||||| || |||||| |||||||||||||||||    
T  42747803 gatgacttataagctagtttatagctgatagaggataagctagttaattgaatttgtagtgtttggtaaaatt 42747731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 1509809 - 1509758
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||||||||| || ||||||||||| | ||||||| ||||||    
T  1509809 aagcttttttcaacttatttacacaagttctccaacagagcttataaaaaca 1509758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 29834917 - 29834968
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||||||||||| ||||||||||||| ||| ||  ||||||||||||||||    
T  29834917 aagcttttttcaatttatttccataagctctacatgatagcttatgaaaaca 29834968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 35017628 - 35017581
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagc 136  Q
    ||||||||||||||||||||| ||||||  | ||||||||||||||||    
T  35017628 ttttcaacttatttccataagctctccaggacagcttatgaaaacagc 35017581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 295
Target Start/End: Complemental strand, 35058744 - 35058681
Alignment:
Q  233 aatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaag 295  Q
    ||||| |||||||||||||||||||| ||  || || ||||||| |||||||||||||||||||    
T  35058744 aatttgtagtgtttggtaaaattagcggttgaactaccttataaatatgaaatgacataaaaag 35058681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 36514606 - 36514667
Alignment:
Q  8 acttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaa 66  Q
    ||||||||||| ||||||||| |||||||||||   |||||||| ||||||||| |||||||    
T  36514606 acttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaa 36514667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 48573555 - 48573497
Alignment:
Q  316 tattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||||| ||||||||||||| | ||||||||||||||| ||||||||  |||||||||||    
T  48573555 tattttctcaattaagattgtaggggtaaaattgagat-aaaagtgaatagctataagct 48573497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 2294969 - 2294907
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||| ||||||| | |||||||||||| |||| ||||||||| ||||| ||||||    
T  2294969 aagctgttttcaccttattttcgtaagttctccaagatagtttatgaaaatagcttatagctt 2294907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 5047034 - 5046983
Alignment:
Q  323 tcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||||||||||||| |||||| ||  ||||||| |||||||||||||    
T  5047034 tcaattaagattgcaagggtagaattgaaat--aaagtgacaagctataagcta 5046983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 16322894 - 16322852
Alignment:
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||    
T  16322894 cttatttccataagctcttcaaaatagcctatgaaaacagctt 16322852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 17779009 - 17778955
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||| |||||||||| || |||||||| ||||||||||||||| |||| ||||    
T  17779009 ttttcaccttatttccaaaaattctccaagatagcttatgaaaactgcttatagc 17778955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 28077087 - 28077133
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||| |||||||| ||||| |||| ||||||||||||||||||||    
T  28077087 ttttcagcttatttcaataagctctctaaaatagcttatgaaaacag 28077133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 33723305 - 33723339
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataa 35  Q
    ||||||||||||||||| |||||||||||||||||    
T  33723305 tggattgacttatttgaacttatctactaccataa 33723339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 376
Target Start/End: Original strand, 37131419 - 37131525
Alignment:
Q  270 ttataagtatgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagcta 369  Q
    |||||| ||||||||||||||| |  | || |||| || ||| ||||| ||||| | ||||||||| |  ||||||||  || | |||||||||||||||    
T  37131419 ttataaatatgaaatgacataacataatgtgcattaaattaatatttaattttttacttaagattgtagtggtaaaatcaagttgaaaagtgataagcta 37131518  T
Q  370 taagcta 376  Q
    |||||||    
T  37131519 taagcta 37131525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 138
Target Start/End: Complemental strand, 37811953 - 37811855
Alignment:
Q  43 actgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||| ||| ||||||| ||||||||||    |||||| ||||| || || |||||||||||||||||| || ||||||  || |||||||||||||||||    
T  37811953 actggttgagagaacttatgaaaacagcttatgacat-gttcataaactgttttcaacttatttccattagctctccatgatggcttatgaaaacagctt 37811855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 51929800 - 51929842
Alignment:
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||| |||| | |||||||||||||||||||||    
T  51929800 cttatttccataagctctctagaatagcttatgaaaacagctt 51929842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 449
Target Start/End: Original strand, 52596414 - 52596444
Alignment:
Q  419 tcaaaaacatgtcttaccaaacagaccctat 449  Q
    |||||||||||||||||||||||||||||||    
T  52596414 tcaaaaacatgtcttaccaaacagaccctat 52596444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 6557114 - 6557051
Alignment:
Q  6 tgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaa 66  Q
    |||||||||||| ||||||||||| ||||||||||   ||||| |||| ||||||| |||||||    
T  6557114 tgacttatttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaa 6557051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 10744365 - 10744304
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| ||||| |||||| |||||||  |||||||||| || | ||||||||||||||||||    
T  10744365 gttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagctt 10744304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 17603399 - 17603456
Alignment:
Q  86 cttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||| |||||||||| || ||||||||||| ||||||||| |||||| ||| ||||    
T  17603399 ctttttacaacttattttcagaagttctccaatatagcttataaaaacaacttatagc 17603456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 24225251 - 24225300
Alignment:
Q  88 tttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    |||||||| |||||| |||||||| |||||  ||||||||||||||||||    
T  24225251 tttttcaaattattttcataagttttccaatgtagcttatgaaaacagct 24225300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 294
Target Start/End: Original strand, 28870456 - 28870541
Alignment:
Q  210 atagctgataacctagttgatcgaatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatgaaatgacataaaaa 294  Q
    ||||| ||||| |||||| || |||||| |||||||||||||||||| | | | || ||||||||||  ||||||| |||||||||    
T  28870456 atagcggataagctagtttattgaatttttagtgtttggtaaaattaacagttgaactagcttataaaaatgaaattacataaaaa 28870541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 30259504 - 30259561
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagc-ttatgaaaacagcttgtagctt 145  Q
    ||||||||||||||||||||| ||||||  ||||| ||||| ||||||||| ||||||    
T  30259504 ttttcaacttatttccataagctctccatgatagctttatgcaaacagcttatagctt 30259561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 35925754 - 35925697
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||| ||||| ||||||||||||||||||||  ||||||  |||||||||| |||||    
T  35925754 gttcataagctgttttcaacttatttccataaactctccatgatagcttatggaaaca 35925697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37617388 - 37617459
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    |||||||||||||||||| ||||||| | || ||||||||   |||||||||| ||||| | ||||||||||    
T  37617388 tggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacag 37617459  T

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Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 38001734 - 38001671
Alignment:
Q  9 cttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    |||||||||| ||||| |||  ||||||||||   |||||||||||||||||| ||||||||||    
T  38001734 cttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacag 38001671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 42174918 - 42174853
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| ||||| |||| ||||||||| |||||||||||||| ||| ||||| |||||| ||| ||||    
T  42174918 ttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagc 42174853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 51957401 - 51957446
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||||  ||||||||||| |||| ||||||||||||    
T  51957401 ttttcaacttatttctgtaagttctccagaataacttatgaaaaca 51957446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 2777944 - 2777888
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||| ||||||||||||||  || ||||| |||||||||| ||||||    
T  2777944 ttttcagcttattttcataagttctccaagttaacttattaaaacagcttatagctt 2777888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 3319869 - 3319897
Alignment:
Q  1 tggattgacttatttgagcttatctacta 29  Q
    |||||||||||||||||||||||||||||    
T  3319869 tggattgacttatttgagcttatctacta 3319897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 5741753 - 5741683
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagttttag---actgtttgggagaactcatgaaaaca 68  Q
    ||||||| |||||||||||||| |||||  ||||||||||     |||||||||||||||| |||||||||    
T  5741753 tggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaaca 5741683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 6262084 - 6262040
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaata 121  Q
    ||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  6262084 gttcataagctattttcaacttatttccacaagctctccaaaata 6262040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 8130488 - 8130432
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||| |||||||||||| ||||  |||||||||||||||| ||| ||||||    
T  8130488 ttttcagcttgtttccataagttttccatgatagcttatgaaaacaacttatagctt 8130432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 10809397 - 10809341
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||| |||||||||||||| |||||| |||| |||| ||| ||||||    
T  10809397 ttttcagcttattttcataagttctccaatatagctgatgagaacaacttatagctt 10809341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 37842373 - 37842429
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||  ||||||||| ||| |||||||||||||||| ||| ||||||    
T  37842373 ttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagctt 37842429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 38322081 - 38322133
Alignment:
Q  324 caattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||  |||||| || ||||||| ||||| |||||||||||||||||    
T  38322081 caattaagataacaagggcaagattgagaaaaaaattgataagctataagcta 38322133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 40943245 - 40943285
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatga 129  Q
    ||||||||||||||| | ||| |||||||||||||||||||    
T  40943245 ttttcaacttatttctacaagctctccaaaatagcttatga 40943285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 49862 - 49920
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49862 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 49920  T

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Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 232 - 376
Target Start/End: Complemental strand, 724764 - 724618
Alignment:
Q  232 gaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttattt-tttcaatta 329  Q
    |||||| ||||||||| |||||||||  ||  ||||||||||||| ||| |||| ||||| ||| ||||  |||||| ||| |||||||| |||||||||    
T  724764 gaatttgtagtgtttgataaaattagtggttgaagtagcttataaatataaaataacatataaaaaggtatatttaattaatatttatttctttcaatta 724665  T
Q  330 agattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    | |||||||| ||||||||||| |||||||||||| |||||||||||    
T  724664 aaattgcaagagtaaaattgaggtaaaaagtgatacgctataagcta 724618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 242 - 363
Target Start/End: Complemental strand, 5976823 - 5976699
Alignment:
Q  242 tgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagag-gttcatttaagtaacattta-ttttttcaattaagattgcaa 338  Q
    |||||||||||||| || ||  ||||| ||||||| ||| |||||||||||||| |  || ||||||| ||| ||||| ||||||||||| |||||||||    
T  5976823 tgtttggtaaaatttgcagttgaagtaacttataaatataaaatgacataaaaaaaatgtacatttaattaatatttagttttttcaatttagattgcaa 5976724  T
Q  339 gggtaaaattgagataaaaagtgat 363  Q
    ||||||||||||||||| |||||||    
T  5976723 gggtaaaattgagataacaagtgat 5976699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 9749906 - 9749958
Alignment:
Q  321 tttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  9749906 tttcaattaagattgcaggggtaaaattgagataaataatgataagctataag 9749958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 31624154 - 31624086
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||||| ||||||    
T  31624154 gttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctt 31624086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 2455126 - 2455005
Alignment:
Q  10 ttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaac-agtgacatcgttcaaaagcttttttcaacttatttcca 105  Q
    |||||||| ||||||||||| ||||||||||   ||||||||||||||||||  |||||||   |||||| ||||| || || |||||| ||||||| ||    
T  2455126 ttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaacttatgacattgttcataacctgttttcagcttattttca 2455027  T
Q  106 taagttctccaaaatagcttat 127  Q
    | |||||||||| ||| |||||    
T  2455026 ttagttctccaacataacttat 2455005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 373
Target Start/End: Complemental strand, 9750298 - 9750243
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    |||||||||||||||| |||| ||||||||||||||||||  ||||||||||||||    
T  9750298 ttttttcaattaagatagcaaaggtaaaattgagataaaatatgataagctataag 9750243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 358
Target Start/End: Original strand, 17328630 - 17328721
Alignment:
Q  268 gcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttattttttc-aattaagattgcaagggtaaaattgagataaaaa 358  Q
    |||||||| ||| |||||| || |||| | || ||||||| ||| |||||||||||| |||| |||||||| ||||||||||||||||||||    
T  17328630 gcttataaatataaaatgatatcaaaaaatgtgcatttaattaatatttattttttccaattgagattgcaggggtaaaattgagataaaaa 17328721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 20368109 - 20368243
Alignment:
Q  9 cttatttgagcttatctactac---cataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaactt 98  Q
    ||||||||| ||||| ||||||   ||||||||||   ||||| |||||||||||| |||||||||     |||||| ||||| |||||  |||||||||    
T  20368109 cttatttgaacttatttactactgacataagttttgtaagactatttgggagaacttatgaaaacaacttatgacat-gttcataagctagtttcaactt 20368207  T
Q  99 atttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| |||||||||||||| | ||||||||||||||    
T  20368208 attttcataagttctccaagaaagcttatgaaaaca 20368243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 6329704 - 6329753
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagc 367  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  6329704 ttttttcaattaagattgtaggggtaaaattgagctaaaaagtgataagc 6329753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 2046119 - 2046175
Alignment:
Q  316 tattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    ||||||||||||||||||| |||||||||||||||||| || | |||||| ||||||    
T  2046119 tattttttcaattaagatttcaagggtaaaattgagatgaataatgataaactataa 2046175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 2455862 - 2455819
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  2455862 ttttcaacttatttccataagctctccaagatagcttatgaaaa 2455819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 9763618 - 9763567
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||||||||||||||| || |||||||||| ||| ||||||||||||||||    
T  9763618 aagcttttttcaacttaatttcataagttctacaatatagcttatgaaaaca 9763567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 373
Target Start/End: Original strand, 19345865 - 19345920
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    ||||||||||||| |||| |||| ||||||||||||| ||||||||||| ||||||    
T  19345865 ttttttcaattaaaattgaaaggctaaaattgagatagaaagtgataaggtataag 19345920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 34430473 - 34430524
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  34430473 aagcttttttcagcttattttcataacttctccaagatagcttatgaaaaca 34430524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 835267 - 835321
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||| ||||||| |||||||||||||| ||||||||||||||| |||| ||||    
T  835267 ttttcagcttattttcataagttctccaagatagcttatgaaaactgcttatagc 835321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 3341245 - 3341187
Alignment:
Q  301 catttaagtaacatttat-tttttcaattaagattgcaagggtaaaattgagataaaaa 358  Q
    ||||||| ||| |||||| |||||||||||||||||| ||||||| |||||||||||||    
T  3341245 catttaattaatatttatctttttcaattaagattgcgagggtaatattgagataaaaa 3341187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 367
Target Start/End: Original strand, 6338561 - 6338607
Alignment:
Q  321 tttcaattaagattgcaagggtaaaattgagataaaaagtgataagc 367  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||    
T  6338561 tttcaattaagattgtaggggtaaaattgagctaaaaagtgataagc 6338607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 8014431 - 8014493
Alignment:
Q  232 gaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaa 293  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||  ||||||||||| ||||    
T  8014431 gaatttatagtgtttggtaaaattagcagtcgaactagcttataaacatgaaatgacaaaaaa 8014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 9667997 - 9668059
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||||||||||||||||||||| ||||| ||| || |||||||||||  |||||||||    
T  9667997 aagctgttttcaacttatttccataagctctccgaaacagtttatgaaaacaaattgtagctt 9668059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 24476671 - 24476605
Alignment:
Q  72 acatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||| ||||| ||||| ||||||||||||||| ||  ||||||||||||||||||| ||||| ||||    
T  24476671 acattgttcataagctattttcaacttatttcaatccgttctccaaaatagcttatcaaaactgctt 24476605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 4405558 - 4405611
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctata 371  Q
    ||||||||||||||||  ||| ||||||||||||| ||||| ||||||||||||    
T  4405558 ttttttcaattaagataacaaaggtaaaattgagagaaaaaatgataagctata 4405611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 6536678 - 6536613
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| |||||||||||||||||||| ||||| |||||||| ||||||| | |||||| ||| ||||    
T  6536678 ttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaacaacttatagc 6536613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 13907722 - 13907592
Alignment:
Q  9 cttatttgagcttatctactaccataagtttt-agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttc 103  Q
    |||||||||| ||||||| |  |||||||||| |||| ||||| ||||| | ||||||||||    |||||| ||||| ||| | ||||||  ||||||     
T  13907722 cttatttgagtttatctagtggcataagttttgagacggtttgagagaatttatgaaaacagcttctgacattgttcacaagttattttcagtttatttt 13907623  T
Q  104 cataagttctccaaaatagcttatgaaaaca 134  Q
    ||||| |||||||| || |||||||||||||    
T  13907622 cataatttctccaagatggcttatgaaaaca 13907592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 3951902 - 3951962
Alignment:
Q  313 atttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    ||||||||||||||||||||||| | ||||||||| | |||||| |||||| || ||||||    
T  3951902 atttattttttcaattaagattggaggggtaaaatggggataaagagtgatgagttataag 3951962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 835184 - 835223
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt 40  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  835184 tggattgccttatttgagcttatctactagcataagtttt 835223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 2205610 - 2205653
Alignment:
Q  91 ttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaaca 2205653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 4246468 - 4246413
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| ||||||||||||||  ||| | |||||| |||||||||||||||||||||    
T  4246468 aagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagctt 4246413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 4420707 - 4420652
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    ||||| ||||| |||||| |||||||||||||| ||||||| |||||||| |||||    
T  4420707 gttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaa 4420652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 8420209 - 8420264
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| ||||||||||||||||||||| ||||||  |||||||| || ||||||||    
T  8420209 aagctattttcaacttatttccataagctctccattatagcttacgagaacagctt 8420264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 12111114 - 12111079
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataag 36  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12111114 tggattgacttatttgagcttatctactagcataag 12111079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 12628399 - 12628356
Alignment:
Q  84 agcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    |||| ||||||||||| || ||||||||||||||||||||||||    
T  12628399 agctgttttcaacttactttcataagttctccaaaatagcttat 12628356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 365
Target Start/End: Original strand, 14755772 - 14755862
Alignment:
Q  277 tatgaaatgacataaaaagaggttcatttaagtaacattta--ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataa 365  Q
    |||||||| ||||| ||| | ||  |||||| |||||||||  |||||||||| ||| ||||| | |||||||||||||||||| ||||||    
T  14755772 tatgaaattacatacaaaaatgtgtatttaattaacatttaatttttttcaataaagcttgcaggagtaaaattgagataaaaaatgataa 14755862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 24982742 - 24982703
Alignment:
Q  104 cataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  24982742 cataagttctccaaaataacttatgaaaacagcttatagc 24982703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 29052773 - 29052694
Alignment:
Q  216 gataacctagttgatcgaatttatagtgtttggtaaaattagccgt-caagtagcttataagtatgaaatgacataaaaa 294  Q
    ||||| |||| |||| ||||||  ||||||||||||||| ||| || ||  |||||||||| ||||||||||||||||||    
T  29052773 gataagctagctgattgaatttgcagtgtttggtaaaataagcggttcacctagcttataaatatgaaatgacataaaaa 29052694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 367
Target Start/End: Original strand, 6352299 - 6352352
Alignment:
Q  313 atttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagc 367  Q
    |||| |||||||||||||||||| | ||||||||||| | |||||||||||||||    
T  6352299 attttttttttcaattaagattgtaggggtaaaattg-gctaaaaagtgataagc 6352352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 6647439 - 6647393
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||||||||||| |||||| |||| || |||||||||||||||||    
T  6647439 ttttcaacttattttcataagctctctaagatagcttatgaaaacag 6647393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 9197190 - 9197248
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||| ||||||||   |||||||||||||||||||| |||| | ||||||||    
T  9197190 ttttttcaattgagattgcagaagtaaaattgagataaaaagttataaacaataagcta 9197248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 30536568 - 30536514
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    |||||||||||||||||||| ||||| |||||||| |||||| || ||| |||||    
T  30536568 aagcttttttcaacttattttcataaattctccaatatagctaataaaagcagct 30536514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 31338123 - 31338089
Alignment:
Q  2 ggattgacttatttgagcttatctactaccataag 36  Q
    |||||||||||||||||||||||||||| ||||||    
T  31338123 ggattgacttatttgagcttatctactagcataag 31338089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 31624952 - 31625002
Alignment:
Q  82 aaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    |||||| |||||| ||||||| |||||||||||||| |||||||| |||||    
T  31624952 aaagctgttttcagcttattttcataagttctccaatatagcttacgaaaa 31625002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 32729153 - 32729203
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    ||||||||| | |||||||||||| | |||||||||| |||||||||||||    
T  32729153 gttcaaaagttattttcaacttatgttcataagttcttcaaaatagcttat 32729203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 1275202 - 1275145
Alignment:
Q  88 tttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||| |||||||||||||| ||||||  ||| | |||||||||||||| ||||||    
T  1275202 tttttcagcttatttccataagctctccaggataacatatgaaaacagcttatagctt 1275145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 1401154 - 1401105
Alignment:
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||||| ||||||  |||||||||||||||||||| ||||||    
T  1401154 cttatctccataagctctccatgatagcttatgaaaacagcttatagctt 1401105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 2460169 - 2460206
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagctta 126  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  2460169 ttttcaacttatttccataagctctccataatagctta 2460206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 9109252 - 9109325
Alignment:
Q  72 acatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||| ||||| ||| | |||||| ||||||| |||| |||||||||| ||| | ||||||||||||| ||||||    
T  9109252 acattgttcataagttgttttcaccttattttcataggttctccaaattagttaatgaaaacagcttatagctt 9109325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 19376632 - 19376591
Alignment:
Q  106 taagttctccaaaatagcttatgaaaacagcttgtagctttt 147  Q
    |||||||||||||| |||| ||||||||||||| ||||||||    
T  19376632 taagttctccaaaacagctcatgaaaacagcttatagctttt 19376591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 20861716 - 20861773
Alignment:
Q  88 tttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||||||||||| |||||||||| || |||| |||  ||||||||||| ||||||    
T  20861716 tttttcaacttattttcataagttctacacaataacttgggaaaacagcttatagctt 20861773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 33737876 - 33737843
Alignment:
Q  2 ggattgacttatttgagcttatctactaccataa 35  Q
    ||||||||||||||||| ||||||||||||||||    
T  33737876 ggattgacttatttgagtttatctactaccataa 33737843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 33787763 - 33787812
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| | |||||||||||| ||||||| ||| ||||||||||||||||    
T  33787763 ttttcagcctatttccataagctctccaagataacttatgaaaacagctt 33787812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 837234 - 837278
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaac 133  Q
    |||||| ||||||| |||||||||||||| |||||| ||||||||    
T  837234 ttttcagcttattttcataagttctccaagatagctaatgaaaac 837278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4163300 - 4163260
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttta 41  Q
    ||||||| ||||||||||||||||||||  |||||||||||    
T  4163300 tggattggcttatttgagcttatctactggcataagtttta 4163260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4224921 - 4224881
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttta 41  Q
    ||||||| ||||||||||||||||||||  |||||||||||    
T  4224921 tggattggcttatttgagcttatctactggcataagtttta 4224881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 9093574 - 9093630
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||| | ||||||||| || | |||||||||||||||||| ||||||    
T  9093574 ttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagctt 9093630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10645308 - 10645378
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaaca 68  Q
    ||||||| || ||||||| ||||||| |  ||||||||||   |||||||||||||||||| |||||||||    
T  10645308 tggattggctaatttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaaca 10645378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 27903899 - 27903935
Alignment:
Q  340 ggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  27903899 ggtaaaattgagataaaaactgataaggtataagcta 27903935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 30784688 - 30784656
Alignment:
Q  3 gattgacttatttgagcttatctactaccataa 35  Q
    ||||||||||||||||||||||||||| |||||    
T  30784688 gattgacttatttgagcttatctactatcataa 30784656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32205936 - 32205972
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagt 37  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  32205936 tggattgacttatttgaccttatctactagcataagt 32205972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 33074996 - 33075024
Alignment:
Q  110 ttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||||||||||||||||||    
T  33074996 ttctccaaaatagcttatgaaaacagctt 33075024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 9e-25; HSPs: 88)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 183 - 376
Target Start/End: Original strand, 44984153 - 44984354
Alignment:
Q  183 gatgatttataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaa---aattagccgtcaa-gtagcttataagta 278  Q
    ||||| ||||||| || |||| |||||||||  ||||| ||||  |||  ||||| |||||||| ||||   ||||||| || || ||| ||||||| ||    
T  44984153 gatgacttataagttagcttatagctgatagtggataagctagcagattcaatttgtagtgttttgtaataaaattagcggttaaagtaccttataaata 44984252  T
Q  279 tgaaatgacataaaaagaggttcatttaagtaa----catttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagc 374  Q
    |||||||||||||||| | || ||||||| |||     |||||||||||| ||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  44984253 tgaaatgacataaaaaaatgtgcatttaattaatatttatttattttttcgattaagattactagggtaaaattgagataaaaagtgataacctataagc 44984352  T
Q  375 ta 376  Q
    ||    
T  44984353 ta 44984354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 372
Target Start/End: Complemental strand, 42139612 - 42139444
Alignment:
Q  205 agctgatagctgataacctag-ttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttca 302  Q
    |||||||||| ||||| |||| ||| || ||||| |||||||||||||||||||| ||  || |||||||||| |||||||||| |||||| | | | ||    
T  42139612 agctgatagcggataatctagcttgttc-aatttgtagtgtttggtaaaattagcagttgaactagcttataaatatgaaatgatataaaa-gtgctaca 42139515  T
Q  303 tttaagtaacattta-ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    ||||| ||| ||||| |||||||||||||||||  | |||||||||||||||||| | |||||||||||||    
T  42139514 tttaattaatatttaattttttcaattaagattagaggggtaaaattgagataaataatgataagctataa 42139444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 179 - 375
Target Start/End: Complemental strand, 27863983 - 27863786
Alignment:
Q  179 agcggatgatttataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtcaag-tagcttataagt 277  Q
    |||||||||||||||| | | |||| |||| ||||   ||||  ||| |||| |||||| ||||||||| |||||||| | ||  || |||||||||| |    
T  27863983 agcggatgatttataaaccaacttatagcttatagaaaataatttagctgattgaatttgtagtgtttgataaaattaccggttgaggtagcttataaat 27863884  T
Q  278 atgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
     |||||||||| ||||| |    ||||||| ||| ||||||||||||||| |||||| ||  ||||||||| ||||||||||||||||| ||||||||    
T  27863883 gtgaaatgacaaaaaaaaaaaaacatttaattaatatttattttttcaatcaagattacagaggtaaaattaagataaaaagtgataagttataagct 27863786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 232 - 366
Target Start/End: Complemental strand, 21721980 - 21721844
Alignment:
Q  232 gaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttat-tttttcaatta 329  Q
    |||||| ||| |||||||||||||||| ||  || |||||||||| ||| ||||||||||||||   || ||||||| ||  |||||| |||||||||||    
T  21721980 gaatttgtagagtttggtaaaattagcagttgaaatagcttataaatataaaatgacataaaaaattgtgcatttaattattatttatatttttcaatta 21721881  T
Q  330 agattgcaagggtaaaattgagataaaaagtgataag 366  Q
    | |||||||||||||||| |||||||||||| |||||    
T  21721880 atattgcaagggtaaaatggagataaaaagttataag 21721844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 372
Target Start/End: Complemental strand, 40910166 - 40909973
Alignment:
Q  183 gatgatttataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaa---aattagccgtcaa-gtagcttataagta 278  Q
    ||||| ||||||| || |||| |||||||||  ||||| ||||  |||  ||||| |||||||| ||||   ||||||| || || ||| ||||||| ||    
T  40910166 gatgacttataagttagcttatagctgatagtggataagctagcagattcaatttgtagtgttttgtaataaaattagcggttaaagtaccttataaata 40910067  T
Q  279 tgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    |||||||||||||||| | || ||||||| |   |||| ||||| | ||||||||| | |||||||||||||||||||||||||||| ||||||    
T  40910066 tgaaatgacataaaaaaatgtgcatttaatttttatttttttttccgattaagattactagggtaaaattgagataaaaagtgataacctataa 40909973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 205 - 359
Target Start/End: Complemental strand, 31063186 - 31063030
Alignment:
Q  205 agctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttcat 303  Q
    |||||||||| ||||| |||   ||| |||||| ||||||||| ||| |||||| ||  |||||  |||||| ||||||||||||||| || | || |||    
T  31063186 agctgatagcggataaactaacagattgaatttgtagtgtttgataagattagcggttgaagtaatttataaatatgaaatgacataagaaaatgtacat 31063087  T
Q  304 ttaagtaacatttatt-ttttcaattaagattgcaagggtaaaattgagataaaaag 359  Q
    |||| ||| ||||||| |||||||||||||||| | ||| |||||||||||||||||    
T  31063086 ttaattaatatttattcttttcaattaagattgtaggggcaaaattgagataaaaag 31063030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 26143565 - 26143707
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt-agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaa 95  Q
    ||||||| ||| ||||||||||||||||  ||||| |||| |||||||||||||||||| | |||||||     || ||| ||||| | | | ||||||     
T  26143565 tggattggcttgtttgagcttatctactgacataaattttgagactgtttgggagaacttacgaaaacaacttatgtcattgttcacaggttattttcag 26143664  T
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||||| ||||||||||||||  |||||||||||||||||||    
T  26143665 cttattttcataagttctccaagttagcttatgaaaacagctt 26143707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 234 - 375
Target Start/End: Complemental strand, 27679289 - 27679144
Alignment:
Q  234 atttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttatt------ttttcaa 326  Q
    ||||||||||| ||||||||||||| ||  || |||||||||| |||||||||||||||||| |     |||||| ||| |||||||      ||||| |    
T  27679289 atttatagtgtctggtaaaattagcggttgaactagcttataaatatgaaatgacataaaaaaaat---atttaattaatatttattattattttttcga 27679193  T
Q  327 ttaagattgcaagggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||||||| || |||||||||||||||||| | ||||||||||||||||    
T  27679192 ttaagattacatgggtaaaattgagataaataatgataagctataagct 27679144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 6167308 - 6167357
Alignment:
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  6167308 cttatttccataagttctccaaaatagcttataaaaacagcttatagctt 6167357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 43279466 - 43279601
Alignment:
Q  17 agcttatctactaccataagtttt---agactgtttgggaga--actcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccata 107  Q
    ||||||||||||| ||||||||||   |||||||||||||||  | | ||||||||||    |||||   |||| |||||||||||||||||||| || |    
T  43279466 agcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcaca 43279565  T
Q  108 agttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||||||| ||||||||| |||||| ||| ||||    
T  43279566 agttctccaatatagcttataaaaacaacttatagc 43279601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 376
Target Start/End: Complemental strand, 44810302 - 44810115
Alignment:
Q  191 ataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtcaagtagcttataagtatgaaatgacata 290  Q
    |||||||| |||| || ||| ||| ||||| |||| |||| |||||| |||  |||||||||| |||| || || ||||||||||||||| ||||| ||     
T  44810302 ataagctatcttatagatgacagcggataagctagctgattgaatttgtagcatttggtaaaactagcggtgaactagcttataagtatgcaatgatatg 44810203  T
Q  291 aaaagaggttcatttaagtaacattt-atttt--ttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||| || |  ||||||  || |||| |||||  |||||||||| || ||||||||||||||||||||||| || |||  |||||||||    
T  44810202 aaaa-agataaatttaatcaatattttattttctttcaattaaggttacaagggtaaaattgagataaaaaatggtaacatataagcta 44810115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 371
Target Start/End: Original strand, 12238220 - 12238376
Alignment:
Q  216 gataacctagttgatcgaatttatagtgtttggtaaaattagccgtcaagt-agcttataagtatgaaatgacataaaaagaggttcatttaagtaacat 314  Q
    ||||| ||| ||||| |||||| |||||||| ||||||||||| || || | | ||||||  |||||||| ||||||||  | || ||||||| | | ||    
T  12238220 gataagctaattgattgaatttgtagtgttttgtaaaattagcagttaaattaacttatatatatgaaataacataaaataaagtgcatttaattcatat 12238319  T
Q  315 ttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctata 371  Q
    ||||||||| || ||| |||| | || |||| |||||||||| ||||||||||||||    
T  12238320 ttattttttaaaataaaattgtagggttaaagttgagataaagagtgataagctata 12238376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 17487937 - 17488000
Alignment:
Q  301 catttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataa 365  Q
    ||||||| ||| ||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  17487937 catttaattaatatttatttttttaattaagattgcatgg-taaaattgagataaaaagtgataa 17488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 18066259 - 18066124
Alignment:
Q  17 agcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataag 109  Q
    ||||||||||||  ||||||||||   | ||||||| | | |||| ||||||||||    |||||| | ||| ||||| |||||| ||||||| | ||||    
T  18066259 agcttatctactgacataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaag 18066160  T
Q  110 ttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||||| |||||||||||||||||||| ||||||    
T  18066159 ttctccaagatagcttatgaaaacagcttatagctt 18066124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 33319739 - 33319876
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt-agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaa 95  Q
    ||||||| ||||||||||||| ||||||  |||||||| | ||||||||||||||||||  |  ||| ||    ||||||  || | ||||||||||||     
T  33319739 tggattggcttatttgagcttgtctactggcataagttgtgagactgtttgggagaacttttataaatagcttatgacat--ttaataagcttttttcag 33319836  T
Q  96 cttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    ||||||| |||||||||||||| |||| ||||||||||||    
T  33319837 cttattttcataagttctccaagatagtttatgaaaacag 33319876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30331898 - 30331830
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaa 66  Q
    ||||||||||||||| ||||||||||||  ||||||||||   |||||||||||||||||| |||||||    
T  30331898 tggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaa 30331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 12464480 - 12464545
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| |||||||||||| ||||||| || ||||||||||| |||||||||||||| ||||| ||||    
T  12464480 ttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagc 12464545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 26202091 - 26202026
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| |||||||||||||||||||| |||||||||||||| ||| ||||| |||||| ||| ||||    
T  26202091 ttcataagcttttttcaacttattttcataagttctccaatatatcttataaaaacaacttatagc 26202026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 29316793 - 29316842
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||||||    
T  29316793 ttttcagcttatttccataagttctccaagatagctgatgaaaacagctt 29316842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 34652048 - 34652097
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  34652048 aagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 40279459 - 40279414
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  40279459 ttttcaacttattttcataagttctccaatatagcttatgaaaaca 40279414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 1939344 - 1939396
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    ||||| ||||||||||||||||||||| ||||||  |||||||||||||||||    
T  1939344 aagctgttttcaacttatttccataagctctccagtatagcttatgaaaacag 1939396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27317526 - 27317456
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaaca 68  Q
    |||||||||||||||||||||||||||   ||||||||||   |||||||||| ||||||| |||||||||    
T  27317526 tggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaaca 27317456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 33931576 - 33931644
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||| || ||||| ||||||||||  | ||||||||||||||||||||||||||||| ||||||    
T  33931576 gttcataagtttatttcagcttatttccactatttctccaaaatagcttatgaaaacagcttatagctt 33931644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 4607072 - 4606938
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaaca----gtgacatcgttcaaaagcttttttc 93  Q
    ||||||| ||||||||||||||||||| |  |||||||||   ||||| ||||||||||||  ||||||||     |||||| |||||  ||||  |||     
T  4607072 tggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctgctttt 4606973  T
Q  94 aacttatttccataagttctccaaaatagcttatg 128  Q
    | ||||||| |||||||||||||| ||||||||||    
T  4606972 agcttattttcataagttctccaagatagcttatg 4606938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 15804512 - 15804461
Alignment:
Q  325 aattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||  |||||||||||||||||||| | |||||||||||||||||    
T  15804512 aattaagattagaagggtaaaattgagataaataatgataagctataagcta 15804461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 16867791 - 16867736
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||| ||| |||||    
T  16867791 ttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatagct 16867736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18179096 - 18179057
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt 40  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  18179096 tggattgacttatttgagcttatctactaacataagtttt 18179057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 26626944 - 26626869
Alignment:
Q  70 tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||| || || ||||||  |||||| |||||||||| ||| |||||||||||||||||||| ||||||    
T  26626944 tgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagctt 26626869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 41501358 - 41501417
Alignment:
Q  301 catttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagt 360  Q
    ||||||| ||| ||||||||||||| ||||||||||| |  |||||||||||||||||||    
T  41501358 catttaattaatatttattttttcatttaagattgcacgaataaaattgagataaaaagt 41501417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 44809808 - 44809866
Alignment:
Q  313 atttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    |||| |||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||    
T  44809808 attttttttttcaatcaagactgcaggggtaaaattgagat-aaaagtgataagctataa 44809866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 11513956 - 11513894
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||| |||||||||| ||||||||||  |||||||||||||||| ||| ||||||    
T  11513956 aagctattttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagctt 11513894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 20952502 - 20952353
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacagt----gacatcgttcaaaagcttttttc 93  Q
    ||||||||||||||||||||||| ||||  || |||||||   ||||| |||  ||||||| |||||||||||    | ||   ||||  | ||||||||    
T  20952502 tggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttttttc 20952403  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    ||||||||| |||||||||||||| |||||| || |||||| ||| ||||    
T  20952402 aacttattttcataagttctccaatatagctaataaaaacaacttatagc 20952353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 41812061 - 41812151
Alignment:
Q  44 ctgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaa 131  Q
    |||||||||||||||  |||||||||    ||||||  |||| |||||||||||||||||||||| |||||| ||||| ||||||| |||||    
T  41812061 ctgtttgggagaacttttgaaaacagcttatgacatttttcataagcttttttcaacttatttcc-taagttttccaagatagcttttgaaa 41812151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 45229568 - 45229518
Alignment:
Q  84 agcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||||||||| ||||||| ||||||||||| || ||||||||||||||||    
T  45229568 agcttttttcagcttattttcataagttctcgaagatagcttatgaaaaca 45229518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 750741 - 750680
Alignment:
Q  70 tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaa 131  Q
    |||||| ||||| ||||| |||| | ||||||| |||||||||||||| |||||||||||||    
T  750741 tgacattgttcataagctgttttgagcttatttgcataagttctccaagatagcttatgaaa 750680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 2142797 - 2142649
Alignment:
Q  5 ttgacttatttgagcttatctactaccataagtttta---gactgtttgggagaactcatgaaaaca----gtgacatcgttcaaaagcttttttcaact 97  Q
    |||||||||||||| ||||||||   |||||||||||   ||||||||||||||||| |||||||||    ||||||  |||||  |||| |||| | ||    
T  2142797 ttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtgacaatgttcattagctgtttttagct 2142698  T
Q  98 tatttccataagttct-ccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||||| |||| |||| |||  ||||||||||| ||| ||||||    
T  2142697 tattttcataaattctcccaagataaattatgaaaacaacttatagctt 2142649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 7871695 - 7871646
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| |||||||||||||| ||| ||||| ||||||||||||||||||    
T  7871695 ttttcagcttatttccataagctcttcaaaagagcttatgaaaacagctt 7871646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 21616649 - 21616694
Alignment:
Q  93 caacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||| ||||||||||||||||||||| ||||||| |||||    
T  21616649 caacttattttcataagttctccaaaatagctaatgaaaatagctt 21616694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31561665 - 31561736
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    |||||||||||||||||| |||||||||| ||||||||||   | ||||||||||| ||||  |||||||||    
T  31561665 tggattgacttatttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaacag 31561736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 32592649 - 32592584
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| |||||||| ||||||||||| |||||||||||||| || |||||| |||||| ||| ||||    
T  32592649 ttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaacaacttatagc 32592584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 41090592 - 41090633
Alignment:
Q  316 tattttttcaattaagattgcaagggtaaaattgagataaaa 357  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  41090592 tattttttcaattaagattgcagggataaaattgagataaaa 41090633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 42419940 - 42419869
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    |||||||||||||||||| |||||| ||  ||||||||||   |||||||||||||||||| | ||||||||    
T  42419940 tggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacag 42419869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1633423 - 1633493
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtt---ttagactgtttgggagaactcatgaaaaca 68  Q
    |||||| ||||||||||| |||||||||| ||||||||   ||| |||||| ||||||||| |||||||||    
T  1633423 tggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacttatgaaaaca 1633493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 9174886 - 9174818
Alignment:
Q  70 tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| ||||| ||||| |||||| ||||||| |||||| |||  || ||||||||||||||||||||    
T  9174886 tgacattgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagctt 9174818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 12289860 - 12289804
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| |||||||||||||||||||| |||||||||||||| |||  |||| ||||||    
T  12289860 ttcataagcttttttcaacttattttcataagttctccaatataaattataaaaaca 12289804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 16451222 - 16451121
Alignment:
Q  41 agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagc 136  Q
    |||| ||||||||||||| |||||||||     |||||| |||||  |||| |||||| ||||||| ||  |||||||||| |||||||| |||||||||    
T  16451222 agaccgtttgggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagcttacgaaaacagc 16451123  T
Q  137 tt 138  Q
    ||    
T  16451122 tt 16451121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 22681191 - 22681259
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||||| |||| | ||||||||||||||||||| |  |||| ||||||||||||||| ||||||    
T  22681191 gttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagctt 22681259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 42621393 - 42621449
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||| || |||||||||| |||| |||||||||||||||| ||||||    
T  42621393 ttttcagcttattttcacaagttctccagaataacttatgaaaacagcttatagctt 42621449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 10646307 - 10646350
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||    
T  10646307 ttttcatcttattttcataagttctctaaaatagcttatgaaaa 10646350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 16398172 - 16398117
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| |||||| ||||||| |||||||||||||| ||| |||||||||| |||||    
T  16398172 aagctgttttcagcttattttcataagttctccaacataacttatgaaaatagctt 16398117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 20926560 - 20926517
Alignment:
Q  84 agcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    ||||||||||||||||||| ||||||||||| || |||||||||    
T  20926560 agcttttttcaacttattttcataagttctctaatatagcttat 20926517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 32098342 - 32098393
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||| |||||| ||||||||| ||||||||||| |||| ||||||||||||    
T  32098342 aagctattttcagcttatttccgtaagttctccataataacttatgaaaaca 32098393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 449987 - 449923
Alignment:
Q  8 acttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 69  Q
    |||||||||||||||||||||| ||||||||||   ||| |||||||||| |||  |||||||||    
T  449987 acttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacag 449923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 1893299 - 1893357
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctttt 147  Q
    |||||| ||||||| || ||||||||||| |||||||  ||||||||||| ||||||||    
T  1893299 ttttcagcttattttcacaagttctccaagatagcttccgaaaacagcttatagctttt 1893357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 2416458 - 2416309
Alignment:
Q  3 gattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaa 95  Q
    |||||||||||||||| |||||||||| ||||||||||   | |||| |||| |||||| || |||||||    || ||| ||||| |||||  |||||     
T  2416458 gattgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgtcattgttcacaagctaatttcag 2416359  T
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    | || || |||||||||||  | ||| ||||| |||||||||| ||||||    
T  2416358 catactttcataagttctcttatataacttataaaaacagcttatagctt 2416309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 6547045 - 6546991
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    ||||| ||||||||||||||| ||||| |||| || ||||||| |||||||||||    
T  6547045 aagctattttcaacttatttctataaggtctctaagatagcttgtgaaaacagct 6546991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 14477687 - 14477741
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    ||||||||||||||||||||  ||| ||||||| ||||| | |||||||||||||    
T  14477687 ttttttcaattaagattgcagaggttaaattgaaataaataatgataagctataa 14477741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 143
Target Start/End: Original strand, 19333331 - 19333397
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    ||||| ||||| || ||| ||||||| |||||| ||||||| |||| ||| ||||||||||||||||    
T  19333331 gttcataagctgttctcagcttattttcataagctctccaatatagtttaagaaaacagcttgtagc 19333397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 35329741 - 35329775
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataa 35  Q
    ||||||||||||| |||||||||||||||||||||    
T  35329741 tggattgacttatgtgagcttatctactaccataa 35329775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 36852516 - 36852478
Alignment:
Q  97 ttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  36852516 ttatttccataagctctccaagatagcttatgaaaacag 36852478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 40682315 - 40682461
Alignment:
Q  1 tggattgacttatttgagcttatctactac---cataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagctttt 90  Q
    ||||||| |||||||||| || ||||||||   ||||||||||   ||| ||||||||||||||  | |||| ||    |||||| ||||| ||| | ||    
T  40682315 tggattggcttatttgagtttgtctactactgacataagttttgtgagattgtttgggagaacttgttaaaatagcttatgacattgttcataagttgtt 40682414  T
Q  91 ttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||| |||||||||| ||| ||| ||||||||||| ||||    
T  40682415 ttcaacttattttcataagttct-caagatatcttatgaaaactgctt 40682461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 372
Target Start/End: Complemental strand, 42034530 - 42034476
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    |||||||||| || |||| |||||||||||||||||||  | |||||||||||||    
T  42034530 ttttttcaatcaaaattgtaagggtaaaattgagataagtaatgataagctataa 42034476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 43205361 - 43205315
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    ||||||||||||||||||||| |||||   |||||||||||||||||    
T  43205361 ttttcaacttatttccataagctctccgtgatagcttatgaaaacag 43205315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 7862632 - 7862583
Alignment:
Q  93 caacttatttccataagttctccaaaatagcttatgaaaacagcttgtag 142  Q
    |||||||||||||||| |||||||| ||| ||||||||| || |||||||    
T  7862632 caacttatttccataaattctccaacataacttatgaaaccaacttgtag 7862583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 8017477 - 8017440
Alignment:
Q  98 tatttccataagttctccaaaatagcttatgaaaacag 135  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  8017477 tattttcataagttctccaagatagcttatgaaaacag 8017440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 12195015 - 12194966
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    |||| |||||||||||||||||||| || ||||||||||| ||| |||||    
T  12195015 ttcataagcttttttcaacttattttcacaagttctccaatataacttat 12194966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 365
Target Start/End: Original strand, 13547741 - 13547770
Alignment:
Q  336 caagggtaaaattgagataaaaagtgataa 365  Q
    ||||||||||||||||||||||||||||||    
T  13547741 caagggtaaaattgagataaaaagtgataa 13547770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 13736305 - 13736366
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    ||||| ||||||| |||||| |||||| |||| |  |||||||||||||||||||| |||||    
T  13736305 aagctgttttcaagttattttcataagctctctagtatagcttatgaaaacagcttatagct 13736366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 15978037 - 15977992
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| ||||||| |||||  ||||||||||||||||||||||||    
T  15978037 ttttcagcttattttcataatctctccaaaatagcttatgaaaaca 15977992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 18179253 - 18179314
Alignment:
Q  84 agcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||| |||||| ||||||| | |||||||||||  ||||||||||||| |||||| ||||||    
T  18179253 agctattttcagcttattttcgtaagttctccaggatagcttatgaaagcagcttatagctt 18179314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 357
Target Start/End: Complemental strand, 30401823 - 30401782
Alignment:
Q  316 tattttttcaattaagattgcaagggtaaaattgagataaaa 357  Q
    |||||| ||||||||||||| | |||||||||||||||||||    
T  30401823 tattttctcaattaagattgtaggggtaaaattgagataaaa 30401782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 35379034 - 35379079
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| ||||||| |||||| ||||||| ||||||||||||||||    
T  35379034 ttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 36863647 - 36863688
Alignment:
Q  93 caacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||| |||||| ||||||| ||||||||||||||||    
T  36863647 caacttattttcataagctctccaagatagcttatgaaaaca 36863688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 40279249 - 40279204
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| || |||| |||||||||||||| ||||||||||||||||    
T  40279249 ttttcagctaattttcataagttctccaacatagcttatgaaaaca 40279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 40279319 - 40279274
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| || |||| |||||||||||||| ||||||||||||||||    
T  40279319 ttttcagctaattttcataagttctccaatatagcttatgaaaaca 40279274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 40279389 - 40279344
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| || |||| |||||||||||||| ||||||||||||||||    
T  40279389 ttttcagctaattttcataagttctccaatatagcttatgaaaaca 40279344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 680555 - 680499
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||| || ||||||| ||| |||||||||||||| ||||| ||||||    
T  680555 ttttcagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagctt 680499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 5043483 - 5043519
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagt 37  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  5043483 tggattgacttatttgaccttatctactagcataagt 5043519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 375
Target Start/End: Complemental strand, 5701329 - 5701293
Alignment:
Q  339 gggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  5701329 gggtaaaattgagataaaaaatgataagttataagct 5701293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 6227803 - 6227759
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaac 133  Q
    |||||| ||| || ||||||| |||||||||||||||||||||||    
T  6227803 ttttcagcttgttaccataagctctccaaaatagcttatgaaaac 6227759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 13869113 - 13869169
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||| |||||| ||| |||||||||  ||| |||||||||||||||| ||||||    
T  13869113 ttttcaaattattttcattagttctccaggataacttatgaaaacagcttatagctt 13869169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 15967919 - 15967867
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctat 370  Q
    |||||| ||||||||||  | |||||||||||||||||| | |||||||||||    
T  15967919 tttttttaattaagatttgaggggtaaaattgagataaataatgataagctat 15967867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 289
Target Start/End: Complemental strand, 15968066 - 15967966
Alignment:
Q  190 tataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgaca 288  Q
    |||||||||||||| ||||| |||| || || |||  | ||  ||||| ||||| |||||||||||||| ||  || |||||||||| ||||||||||||    
T  15968066 tataagctaccttatagctgttagcggacaaactaactaattcaatttgtagtgcttggtaaaattagcggttgaactagcttataaatatgaaatgaca 15967967  T
Q  289 t 289  Q
    |    
T  15967966 t 15967966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 29628761 - 29628817
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||||||||| || ||||| ||||||||||| |||| ||| ||||||    
T  29628761 ttttcagcttatttccataaattttccaagatagcttatgagaacaacttatagctt 29628817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 36125419 - 36125375
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttat 127  Q
    |||||||||| ||||||||| ||||||||||||||  ||||||||    
T  36125419 aagctttttttaacttattttcataagttctccaatttagcttat 36125375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 38325068 - 38325012
Alignment:
Q  241 gtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaaga 296  Q
    |||||||||||||||||| ||  |||| ||| |||||||| ||||||||||||||||    
T  38325068 gtgtttggtaaaattagctgttgaagtggctgataagtataaaatgacataaaaaga 38325012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 39710549 - 39710485
Alignment:
Q  313 atttattttttcaattaagattgcaagggtaaaattgaga-taaaaagtgataagctataagcta 376  Q
    ||||||||||| |||||||||  || ||||||||| ||||  ||||| |||||||||||||||||    
T  39710549 atttatttttttaattaagataacaggggtaaaatggagagaaaaaaatgataagctataagcta 39710485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 165 - 360
Target Start/End: Original strand, 28175383 - 28175581
Alignment:
Q  165 ataatctagcctacagcggatgatttataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-a 263  Q
    |||| ||||| || ||||||||| |||||||||| |||| |||||||||| ||| | |||||||   |||||| ||||||||| || ||||||| ||  |    
T  28175383 ataagctagcttatagcggatgacttataagctagcttatagctgatagcggatcagctagttggctgaatttgtagtgtttgatataattagcggttga 28175482  T
Q  264 agtagcttataagtatgaaatgacataaaaagaggttcatttaagtaaca--tttattttttcaattaagattgcaagggtaaaattgagataaaaagt 360  Q
    ||||||||| || |||||||||||||||||| | ||  |||||| | | |  |||||||||||||  ||||||| | |||||||||| |||||||||||    
T  28175483 agtagcttacaaatatgaaatgacataaaaaaatgtatatttaattgatatttttattttttcaacaaagattgtaggggtaaaattcagataaaaagt 28175581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 372
Target Start/End: Complemental strand, 883910 - 883801
Alignment:
Q  263 aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttatttttt-caattaagattgcaagggtaaaattgagataaaaagtg 361  Q
    ||||||||||||| |||||||||||||||||| | || ||||||| ||  ||||||||||| |||||| ||||||| ||||||||| |||||||||||||    
T  883910 aagtagcttataaatatgaaatgacataaaaa-atgtgcatttaattagtatttatttttttcaattaggattgcaggggtaaaatggagataaaaagtg 883812  T
Q  362 ataagctataa 372  Q
    |||| ||||||    
T  883811 ataaactataa 883801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 372
Target Start/End: Complemental strand, 1243239 - 1243130
Alignment:
Q  263 aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttatttttt-caattaagattgcaagggtaaaattgagataaaaagtg 361  Q
    ||||||||||||| |||||||||||||||||| | || ||||||| ||  ||||||||||| |||||| ||||||| ||||||||| |||||||||||||    
T  1243239 aagtagcttataaatatgaaatgacataaaaa-atgtgcatttaattagtatttatttttttcaattaggattgcaggggtaaaatggagataaaaagtg 1243141  T
Q  362 ataagctataa 372  Q
    |||| ||||||    
T  1243140 ataaactataa 1243130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 233 - 372
Target Start/End: Complemental strand, 3837143 - 3837004
Alignment:
Q  233 aatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaaca-tttattttttcaattaa 330  Q
    ||||| |||||||||||||||||||||| | ||||||||||||| |||| |||||| |||| | ||||  |||||| ||| | |||||||||| |||| |    
T  3837143 aatttgtagtgtttggtaaaattagccgttgaagtagcttataaatatgtaatgac-taaaga-aggtatatttaattaatattttattttttaaattga 3837046  T
Q  331 gattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    ||||||| |||||||||||||||||||||  |||||||||||    
T  3837045 gattgcaggggtaaaattgagataaaaagctataagctataa 3837004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 36517724 - 36517588
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag--tgacatcgttcaaaagcttttttcaa 95  Q
    |||||| | ||||||||||||| |||||  ||||||||||   |||||||||||||||||| || |||||||  |||||| ||||| ||||| ||||||     
T  36517724 tggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagcttgacattgttcataagctattttcag 36517625  T
Q  96 cttatttccataagttctccaaaatagcttatgaaaa 132  Q
     |||||| ||||| |||||||| ||||||||||||||    
T  36517624 tttattttcataatttctccaagatagcttatgaaaa 36517588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 33678927 - 33678774
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| ||||||| | ||||||||||  ||||||||||   ||||  |||||||||||| |||||||||     | |||| |||||  || | |||||    
T  33678927 tggattggcttatttaaacttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacattgttcatgagatgttttc 33678828  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctttt 147  Q
    ||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||    
T  33678827 aacttattttcacaagttttccaagatagcttatgaaaacagcttatagctttt 33678774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 147
Target Start/End: Original strand, 20526895 - 20527005
Alignment:
Q  41 agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagc 136  Q
    |||||||||| ||||||| ||||||||||    ||| || ||| | ||| | |||||| ||||||| |||||||||| ||  ||||||||||||||||||    
T  20526895 agactgtttgagagaactgatgaaaacagcttatgagattgtttataagatcttttcagcttattttcataagttctacactatagcttatgaaaacagc 20526994  T
Q  137 ttgtagctttt 147  Q
    |||||||||||    
T  20526995 ttgtagctttt 20527005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 44235386 - 44235499
Alignment:
Q  263 aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttat-tttttcaattaagattgcaagggtaaaattgagataaaaagtg 361  Q
    |||||| |||||| ||||||||||||||||||  |||  |||||| ||| |||||| |||| ||||||||||| || |||||||||| ||||||||   |    
T  44235386 aagtagtttataaatatgaaatgacataaaaaatggtatatttaattaatatttatgttttccaattaagattacatgggtaaaattcagataaaagagg 44235485  T
Q  362 ataagctataagct 375  Q
    ||||| ||||||||    
T  44235486 ataagttataagct 44235499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 44822011 - 44821962
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  44822011 ttttcaacttattttcataagttctccagaatagcttatgaaaacagctt 44821962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 21568461 - 21568558
Alignment:
Q  41 agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||||||| ||||||||||    | |||   |||| ||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  21568461 agactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaaaca 21568558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 48470190 - 48470051
Alignment:
Q  2 ggattgacttatttgagcttatctactaccataagtttta---gactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttca 94  Q
    |||||| ||||||||||||||||||    |||||||||||   || |||||||||||||| ||||||||||    || |||  |||| |||||||||| |    
T  48470190 ggattggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttga 48470091  T
Q  95 acttatttccataagttctccaaaatagcttatgaaaaca 134  Q
     ||||| | |||||||| | ||||||||||||||||||||    
T  48470090 gcttatgttcataagttattcaaaatagcttatgaaaaca 48470051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 420507 - 420358
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacagt----gacatcgttcaaaagcttttttc 93  Q
    ||||||| ||| ||||||||| ||||||  | |||| |||   |||||||||||||||||| ||||||||| |    ||||   ||| ||||| ||||||    
T  420507 tggattggcttctttgagcttgtctactggcttaagctttgtgagactgtttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttc 420408  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    ||||||||| |||||||||||||| |||||||| | ||||| ||| ||||    
T  420407 aacttattttcataagttctccaatatagcttacggaaacaacttatagc 420358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 205 - 376
Target Start/End: Complemental strand, 2525376 - 2525206
Alignment:
Q  205 agctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatgaaatgacataaaaagaggttcat 303  Q
    |||| ||||| ||||| |||| |||| |||||| || ||||||||||||||||| | | || |||||||||| ||||||||  ||||||||   ||  ||    
T  2525376 agcttatagcggataagctagctgattgaatttgtattgtttggtaaaattagcagctgaactagcttataaatatgaaattgcataaaaat--gtatat 2525279  T
Q  304 ttaagtaacattta-ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||   || ||||| |||||||||| |||| | ||||||||||||||||| ||||| |||||| ||||||||||    
T  2525278 ttattgaatatttaattttttcaatcaagactacaagggtaaaattgagagaaaaaatgataa-ctataagcta 2525206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 20526593 - 20526444
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacagtg----acatcgttcaaaagcttttttc 93  Q
    |||||||||||||||||| ||||||| |   | || ||||   |||||||||| ||||||| |||||||||||     ||||  |||  ||||| ||||     
T  20526593 tggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgttttt 20526494  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    | ||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  20526493 agcttattttcattagttctccaaaatagcttatgaaaacagcttatagc 20526444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 34744164 - 34744035
Alignment:
Q  12 atttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttcc 104  Q
    |||||||||||||||||| |||||| |||   ||||||||||| |||||| ||||||| |     |||||   |||| |||||||||||  |||||||      
T  34744164 atttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgacaattttcacaagcttttttcgccttattttt 34744065  T
Q  105 ataagttctccaaaatagcttatgaaaaca 134  Q
    ||||||||||||| ||||||||||||||||    
T  34744064 ataagttctccaatatagcttatgaaaaca 34744035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 376
Target Start/End: Original strand, 87164 - 87305
Alignment:
Q  239 tagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacattta----ttttttcaattaagat 333  Q
    |||||||| ||||||||||| ||  || ||| || ||| ||||||||||||||||||  | ||||||||| ||| |||||    ||||||||||||||||    
T  87164 tagtgttttgtaaaattagcggttgaattagattgtaaatatgaaatgacataaaaat-gattcatttaaataatatttaatctttttttcaattaagat 87262  T
Q  334 tgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |  | |||||||||||||||||| | || |||||| |||||||    
T  87263 tagaggggtaaaattgagataaatattgttaagctttaagcta 87305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 19302489 - 19302605
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaac 96  Q
    |||||||||||||||||||||||||  ||||||||||   ||| | |||||||||| | ||||||||||    |||||   |||| || |||||||||||    
T  19302489 attgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaacttttttcaac 19302588  T
Q  97 ttatttccataagttct 113  Q
    |||||| ||||||||||    
T  19302589 ttattttcataagttct 19302605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 529439 - 529379
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    ||||| ||||| |||||||| ||||| |||||| ||||||| |||||||||||||||||||    
T  529439 gttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaacagct 529379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 46280284 - 46280344
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||||||||| | ||||| |||||||||||||| ||||||||| |||||||||| ||||    
T  46280284 aagcttttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagc 46280344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 296
Target Start/End: Complemental strand, 15051038 - 15050963
Alignment:
Q  222 ctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaaga 296  Q
    |||| |||| ||||||| ||||||||||||||||||  ||  || |||||||| ||||||||||||||||||||||    
T  15051038 ctagctgattgaatttagagtgtttggtaaaattagtggttgaactagcttatgagtatgaaatgacataaaaaga 15050963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 367
Target Start/End: Complemental strand, 24847301 - 24847175
Alignment:
Q  240 agtgtttggtaaaattagccgtcaagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattgcaag 339  Q
    |||||||| |||||||| | || ||  ||||||||| || ||||| ||||||||| |   | |||||| ||| ||| |||||||||||||| |||  | |    
T  24847301 agtgtttgataaaattaacggttaacgagcttataaataagaaataacataaaaaaattat-atttaattaatattaattttttcaattaaaattttagg 24847203  T
Q  340 ggtaaaattgagataaaaagtgataagc 367  Q
    |||||||||||| |||||||||||||||    
T  24847202 ggtaaaattgaggtaaaaagtgataagc 24847175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 10097204 - 10097261
Alignment:
Q  315 ttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    |||||||||||||||| |||| | ||||||||||||||| |||||||||||| ||||||    
T  10097204 ttattttttcaattaatattgtaggggtaaaattgagat-aaaagtgataagatataag 10097261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 27548317 - 27548259
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| || ||||| |||||||||| ||||| |||||||||||||||||||| ||||||    
T  27548317 tttttccagcttatctccataagttatccaagatagcttatgaaaacagcttatagctt 27548259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 43648292 - 43648243
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||| ||||  |||||||| ||||||||||||||||||||    
T  43648292 ttttcaacttattttcatattttctccaagatagcttatgaaaacagctt 43648243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 47130803 - 47130848
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||    
T  47130803 ttttcaacttattttcacaagttctccaagatagcttatgaaaaca 47130848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9210968 - 9210910
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaa 56  Q
    ||||||||||||||||||||||||||||   |||||||||   ||||||||||||||||    
T  9210968 tggattgacttatttgagcttatctactgatataagttttctgagactgtttgggagaa 9210910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 11619165 - 11619221
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| ||||||||||||||||| || ||||||||||||||  |||||||| ||||||    
T  11619165 ttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaaaca 11619221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 12110404 - 12110356
Alignment:
Q  97 ttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||||| ||| |||||||||||||||||||| ||||||    
T  12110404 ttattttcataagttcttcaagatagcttatgaaaacagcttatagctt 12110356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 19022605 - 19022657
Alignment:
Q  91 ttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||||||||||| |||||||||||||| ||||||||| |||||| ||| ||||    
T  19022605 ttcaacttattttcataagttctccaatatagcttataaaaacaacttatagc 19022657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 365
Target Start/End: Complemental strand, 19087420 - 19087333
Alignment:
Q  277 tatgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataa 365  Q
    |||||||||||||||||| | || ||||||| ||| || || |||| |||||||||||||| | ||||||| || ||||||||| ||||    
T  19087420 tatgaaatgacataaaaaaatgtgcatttaattaatatctaatttt-caattaagattgcaggcgtaaaatggatataaaaagtcataa 19087333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 28165155 - 28165087
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||||| ||||||||||||||||||||| ||||||  ||||||||| || |||| || ||||||    
T  28165155 gttcataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagctt 28165087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 38010778 - 38010710
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||||| |||| | ||||||||||||||||||| |  |||| ||||||||||||||| ||||||    
T  38010778 gttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagctt 38010710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 38499920 - 38499980
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||| ||||||||| || ||||||| |||||||||||||| || ||||||||| |||||||    
T  38499920 ttcataagctttttccagcttattttcataagttctccaagattgcttatgaagacagctt 38499980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 25596085 - 25596042
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||    
T  25596085 ttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 37064481 - 37064536
Alignment:
Q  88 tttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    ||||||| ||||||| ||||||| ||| ||||||||||| ||||||||||| ||||    
T  37064481 tttttcagcttattttcataagtcctctaaaatagcttacgaaaacagcttatagc 37064536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 39506014 - 39505963
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    ||||| |||||| |||||||||||||  |||||| |||||||||||||||||    
T  39506014 aagctattttcagcttatttccataaactctccagaatagcttatgaaaaca 39505963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 39967984 - 39967917
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    ||||| ||||| |||||||||||||| ||| |||||||  | |||||||||||||||| ||| |||||    
T  39967984 gttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagct 39967917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 47559629 - 47559668
Alignment:
Q  99 atttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  47559629 attttcataagttctccaaaataacttatgaaaacagctt 47559668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 7244732 - 7244686
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||| ||||||| |||||| ||||||| |||||||||||||||||    
T  7244732 ttttcagcttattttcataagctctccaatatagcttatgaaaacag 7244686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 11991624 - 11991682
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||||| ||| ||| | |||||||||||| |||| |||||||||||| ||||    
T  11991624 ttttttcaattaaaattacaaagataaaattgagatgaaaaatgataagctatatgcta 11991682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 32410592 - 32410546
Alignment:
Q  88 tttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| |||||||||||||||| ||| |||| ||||||||||||||||    
T  32410592 ttttacaacttatttccataaattccccaagatagcttatgaaaaca 32410546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 34036061 - 34035924
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaac 96  Q
    |||||||||||||||||||||||||  |||| || ||   |||||  |||| |||||| ||||||| |     |||||| ||||| ||| | ||||||||    
T  34036061 attgacttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacattgttcataagttgttttcaac 34035962  T
Q  97 ttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| |  |||||||| || ||||||||||||||||    
T  34035961 ttattttcgcaagttctctaagatagcttatgaaaaca 34035924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 34
Target Start/End: Complemental strand, 35267493 - 35267463
Alignment:
Q  4 attgacttatttgagcttatctactaccata 34  Q
    |||||||||||||||||||||||||||||||    
T  35267493 attgacttatttgagcttatctactaccata 35267463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45338600 - 45338540
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaact 58  Q
    ||||||| |||||||||| ||||| |||| ||||||||||   ||||||||||||||||||    
T  45338600 tggattggcttatttgagtttatccactagcataagttttttgagactgtttgggagaact 45338540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 6244612 - 6244559
Alignment:
Q  241 gtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaa 293  Q
    |||||||||||||||||| ||  |||||||| |||||||| |||||||||||||    
T  6244612 gtgtttggtaaaattagctgttgaagtagctgataagtataaaatgacataaaa 6244559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 18749835 - 18749884
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| |||||||||||||||| |||   ||||||||||||||||||||    
T  18749835 ttttcagcttatttccataagttttccgtgatagcttatgaaaacagctt 18749884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 18865068 - 18865113
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    |||||||||||||||| |||||||||||  ||||| ||||||||||    
T  18865068 ttttttcaacttattttcataagttctctgaaataacttatgaaaa 18865113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 22283756 - 22283817
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    ||||| |||||| ||||||||||||||||||| || || | |||||||||||| || |||||    
T  22283756 aagctgttttcagcttatttccataagttctctaagatggtttatgaaaacagtttatagct 22283817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 24838019 - 24837970
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagc 367  Q
    ||||||||||||| |||  | ||||||||||||| |||||||||||||||    
T  24838019 ttttttcaattaaaattttaggggtaaaattgaggtaaaaagtgataagc 24837970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 28128413 - 28128450
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagctta 126  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  28128413 ttttcagcttatttccataaattctccaaaatagctta 28128450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 30812193 - 30812144
Alignment:
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||||||||||| ||||||  |||||| ||||||||||||| ||||||    
T  30812193 cttatttccataagctctccatgatagctaatgaaaacagcttatagctt 30812144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 38138486 - 38138551
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| |||||||||||||||||||| |||||||||  ||| |||||| || |||||| ||| ||||    
T  38138486 ttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagc 38138551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 47177681 - 47177632
Alignment:
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||| ||||| |||||||| ||||||| |||||||||||| ||||||    
T  47177681 cttattttcataaattctccaagatagcttttgaaaacagcttatagctt 47177632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 5947247 - 5947187
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||| ||||| |||||| ||||||| ||||| |||||| | |||||||||||| |||||||    
T  5947247 ttcataagctcttttcagcttattttcataacttctcctagatagcttatgaatacagctt 5947187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 6991007 - 6990967
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaa 358  Q
    ||||||||||||||||||||||  ||||||| |||||||||    
T  6991007 ttttttcaattaagattgcaagcataaaatttagataaaaa 6990967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8427160 - 8427124
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagt 37  Q
    |||||||| |||||||||||||||||||| |||||||    
T  8427160 tggattgatttatttgagcttatctactaacataagt 8427124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 9050689 - 9050641
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||||| ||||||| || ||||||||||| |||| ||||||||||||    
T  9050689 ttttttcagcttattttcacaagttctccaagatagtttatgaaaacag 9050641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 375
Target Start/End: Original strand, 12473106 - 12473142
Alignment:
Q  339 gggtaaaattgagataaaaagtgataagctataagct 375  Q
    |||||||||||||||||||| |||||||||| |||||    
T  12473106 gggtaaaattgagataaaaaatgataagctacaagct 12473142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 40377864 - 40377920
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttg 139  Q
    |||||||||| |  |||||| |||||||||||||| |||| ||||||||||| ||||    
T  40377864 aagcttttttgagtttattttcataagttctccaatataggttatgaaaacaacttg 40377920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 40598408 - 40598436
Alignment:
Q  1 tggattgacttatttgagcttatctacta 29  Q
    |||||||||||||||||||||||||||||    
T  40598408 tggattgacttatttgagcttatctacta 40598436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 376
Target Start/End: Complemental strand, 29861558 - 29861397
Alignment:
Q  217 ataacctagttgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatt 315  Q
    |||| ||||||||| |||||| |||||||||||||||||| | ||  || |||||| ||| ||| ||||||  |||||| |  |  |||||| ||| |||    
T  29861558 ataagctagttgattgaatttgtagtgtttggtaaaattacctgtagaattagcttttaaatatcaaatgatgtaaaaaaaaatatatttaattaatatt 29861459  T
Q  316 ta--ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||  ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  29861458 taatttttttcaattaagattacaagggtaaaattgagagaaaaa-tgataagctataagcta 29861397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 374
Target Start/End: Complemental strand, 8407639 - 8407503
Alignment:
Q  240 agtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaaa-gaggttcatttaagtaacattta--ttttttcaattaagattg 335  Q
    ||||||||||||||||||| ||  || |||||||||| |||||||||||||||||| ||| |   ||||| ||| |||||  ||||||||| |||||||     
T  8407639 agtgtttggtaaaattagcggttgaactagcttataaatatgaaatgacataaaaaagagatg--tttaattaatatttaatttttttcaagtaagattc 8407542  T
Q  336 caagggtaaaattgagataaaaagtgataagctataagc 374  Q
    || |||||||||||||| ||||| |||||||||||||||    
T  8407541 caggggtaaaattgagagaaaaaatgataagctataagc 8407503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 3346197 - 3346250
Alignment:
Q  316 tattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagcta 369  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  3346197 tattttttcaattaagattgcaaatgtaaaattgagataaaaagtgataagcta 3346250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 143
Target Start/End: Complemental strand, 26771403 - 26771263
Alignment:
Q  10 ttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttattt 102  Q
    |||| |||||||||||||   ||||||||||   |||||||||||||||||| ||||||||||    |||||   ||||||||| |||||||||||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattt 26771304  T
Q  103 ccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
     ||||||||||| || ||| ||||| |||| ||||| ||||    
T  26771303 tcataagttctctaatatatcttataaaaaaagcttatagc 26771263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 30251377 - 30251521
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtt---ttagactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| ||||||||||||||||||||  ||||||||   | |||||||||||||||||| | ||||||||    |  |||  |||| ||||||||| |    
T  30251377 tggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataagctttttac 30251476  T
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    | ||||||| |||||||  ||||| ||||||||||||||||||||    
T  30251477 agcttattttcataagtggtccaagatagcttatgaaaacagctt 30251521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 376
Target Start/End: Original strand, 25019511 - 25019646
Alignment:
Q  239 tagtgtttggtaaaattagccgtcaa-gtagcttataagtatgaaatgacataaaaagaggttcatttaagtaacatttattttttcaattaagattgca 337  Q
    |||||||||||||||||||| || || ||  ||| ||| |||||||||||||||||| | | ||| |||| ||| ||||   ||||||| || |||||||    
T  25019511 tagtgtttggtaaaattagcggttaaagtcacttgtaattatgaaatgacataaaaaaaaggtcagttaattaatattt---ttttcaaatacgattgca 25019607  T
Q  338 agggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||  ||||||||||| | |||||||||||||    
T  25019608 agggtaaaatcaagataaaaagttacaagctataagcta 25019646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 35534541 - 35534676
Alignment:
Q  6 tgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaactt 98  Q
    |||||||||||||||||||||||| ||||||||||   |||||||||| |||||||  |||||||||    |||||   || | |||||||||||  |||    
T  35534541 tgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaagcttttttcggctt 35534640  T
Q  99 atttccataagttctccaaaatagcttatgaaaaca 134  Q
    | || |||||||||||||| ||| ||||||||||||    
T  35534641 actttcataagttctccaatataacttatgaaaaca 35534676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 43717857 - 43718004
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag-------tgacatcgttcaaaagctttt 90  Q
    ||||||| |||||||||||||||||| |  ||||||||||   ||||| |||||||||||| ||||||||||        ||||||| ||| ||||| ||    
T  43717857 tggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacagactatgaggacatcgctcataagctgtt 43717956  T
Q  91 ttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    || | |||| || |||||||||||||| |||||||||| |||||||||    
T  43717957 tttagcttactttcataagttctccaagatagcttatgcaaacagctt 43718004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 369
Target Start/End: Original strand, 12525078 - 12525183
Alignment:
Q  267 agcttataagtatgaaatgacata--aaaagaggttcatttaagtaacattta-ttttttcaattaagattgcaagggtaaaattgagataaaaagtgat 363  Q
    ||||||||| |||||||| ||||   |||| | || ||||||| ||| ||||| |||||| ||||||||||| | |||||||||||||||||||||||||    
T  12525078 agcttataaatatgaaattacatgggaaaaaatgtgcatttaattaatatttactttttttaattaagattgtaggggtaaaattgagataaaaagtgat 12525177  T
Q  364 aagcta 369  Q
    ||||||    
T  12525178 aagcta 12525183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 28769357 - 28769413
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  28769357 ttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagctt 28769413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 294
Target Start/End: Complemental strand, 35764826 - 35764722
Alignment:
Q  191 ataagctaccttagagctgatagctgataacctagttgatcgaatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatgaaatgacat 289  Q
    ||||||||  ||| |||| |||| |||||| ||||||||| ||||||  ||||||||||||||||||| | | || ||| |||||| |||||||||||||    
T  35764826 ataagctaatttatagctaatagttgataatctagttgattgaatttgcagtgtttggtaaaattagcggttgaactagtttataaatatgaaatgacat 35764727  T
Q  290 aaaaa 294  Q
    |||||    
T  35764726 aaaaa 35764722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 145
Target Start/End: Complemental strand, 7514681 - 7514574
Alignment:
Q  42 gactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    |||||||||||||||||  ||||| |||    | |||| ||||| ||||| ||| ||||| |||| ||  |||||| |||||||||||||||||||||||    
T  7514681 gactgtttgggagaacttgtgaaagcagctgataacattgttcataagctgtttccaactaattttcactagttctgcaaaatagcttatgaaaacagct 7514582  T
Q  138 tgtagctt 145  Q
    ||||||||    
T  7514581 tgtagctt 7514574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 12976351 - 12976211
Alignment:
Q  9 cttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatt 101  Q
    ||||||||||||||||||||| |||||| |||   ||||||||| | |||||| |||| |||||    | |||   ||||||||||||||||| ||||||    
T  12976351 cttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaagcttttttcagcttatt 12976252  T
Q  102 tccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    | ||||||||||| || ||||||||| ||||||  |||||||    
T  12976251 t-cataagttctctaatatagcttataaaaacaaattgtagc 12976211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 43504809 - 43504747
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||| |||||||||||||||||||||| ||||||||| |||||| ||| ||||||    
T  43504809 aagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatagctt 43504747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 27028894 - 27028829
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||| ||||| |||||| ||||||| |||||| ||||||| |||||||||||||||||||| ||||    
T  27028894 ttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatagc 27028829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 43045648 - 43045781
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag-tgacatcg---ttcaaaagcttttttc 93  Q
    ||||||| ||||||| ||||||||||||| |||||| |||   ||||||||| ||||| || |||||||||| | ||| |    || | |||||||||||    
T  43045648 tggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagcttttttc 43045747  T
Q  94 aacttatttccataagttctccaaaatagcttat 127  Q
    ||||||||| |||||||||||||| |||| ||||    
T  43045748 aacttattttcataagttctccaatatagtttat 43045781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 35643912 - 35644039
Alignment:
Q  2 ggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacagt----gacatcgttcaaaagcttttttca 94  Q
    |||||| |||||||| |||||||||||  ||||| ||||   ||||||||||||| |||| ||||||| |||    ||||   |||| ||||||||||||    
T  35643912 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 35644011  T
Q  95 acttatttccataagttctccaaaatag 122  Q
    |||||||| |||||| ||||||| ||||    
T  35644012 acttattttcataagctctccaatatag 35644039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 18133801 - 18133659
Alignment:
Q  3 gattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaa 95  Q
    ||||| ||||||| |||||||||||||  |||||||||   ||||||||||||||| ||  ||||| |||    | |||   |||| ||||||||||||     
T  18133801 gattggcttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcag 18133702  T
Q  96 cttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||||| |||||||||||||| |||| |||| ||| ||||||    
T  18133701 cttattttcataagttctccaatatagtttataaaaccagctt 18133659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 28444740 - 28444796
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||||||||||||| |||||| || |||||  |||||||||||||||||||||    
T  28444740 ttttttcaattaagattgcaggggtaagatggagat--aaagtgataagctataagcta 28444796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 31716158 - 31716284
Alignment:
Q  9 cttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatt 101  Q
    |||||||||||||||||| |  ||||  ||||   ||||||||| ||||||||  |||||||||    ||||||  |||| |||||||||||| ||||||    
T  31716158 cttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttcagcttatt 31716257  T
Q  102 tccataagttctccaaaatagcttatg 128  Q
    || |||| |||||||| ||||||||||    
T  31716258 tctataacttctccaagatagcttatg 31716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 38874704 - 38874649
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||| |||| | ||||||| |||| ||||||||||||||||||||||||||||||    
T  38874704 aagctatttttagcttattttcatatgttctccaaaatagcttatgaaaacagctt 38874649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 1930133 - 1930038
Alignment:
Q  47 tttgggagaactcatgaaaacagt----gacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    ||||||||||||  ||||||||||    ||||| ||||| ||||| |||||| ||||||| || ||| || |||| ||||||||||||||||||||    
T  1930133 tttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaacagctt 1930038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 12361250 - 12361188
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||||||||||||||| || |||||  |||| |||||||||||||||| ||||||    
T  12361250 aagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagctt 12361188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38602474 - 38602414
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaact 58  Q
    ||||||||||||||||||||||||||||  ||||||||||   || |||||||||||||||    
T  38602474 tggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaact 38602414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 7514867 - 7514810
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    ||||||||||||||||| ||||| ||||||| |||||||||  ||||||||| |||||    
T  7514867 ttttttcaacttatttctataagctctccaatatagcttatcgaaacagcttatagct 7514810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 11795144 - 11795095
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| |||||||||||||| |||||| |||||||||||||| ||||||    
T  11795144 ttttcagcttatttccataagctctccataatagcttatgaaatcagctt 11795095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 29168023 - 29168129
Alignment:
Q  41 agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagc 136  Q
    |||||||||||||||||| || |||||||    ||||||  |||| ||   ||| ||| |||||||||||||||||||||| |||||| | |||||||||    
T  29168023 agactgtttgggagaacttataaaaacagattatgacatttttcataaatgtttctcagcttatttccataagttctccaagatagctcaggaaaacagc 29168122  T
Q  137 ttgtagc 143  Q
    || ||||    
T  29168123 ttatagc 29168129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 32840912 - 32840979
Alignment:
Q  4 attgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaaca 68  Q
    ||||||||| |||||||||||||||  || |||||||   |||||||||||||||||| |||||||||    
T  32840912 attgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaaca 32840979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36963277 - 36963385
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttc 93  Q
    ||||||| |||||||||||| |||||||  ||||||||||   |||||||||||||||||| |  |||||||    |||||   |||||||||||||| |    
T  36963277 tggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgacaattttcaaaagctttttac 36963376  T
Q  94 aacttattt 102  Q
    |||||||||    
T  36963377 aacttattt 36963385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 6509321 - 6509377
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||| ||||| ||||||  |||||||||||||||||||| ||||||    
T  6509321 ttttcaccttatttcaataagctctccaggatagcttatgaaaacagcttatagctt 6509377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 8062381 - 8062325
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||||||||  |||| || |||||||||||||||||||| ||||||    
T  8062381 ttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagctt 8062325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 10114541 - 10114485
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||| |||| ||||||||| |||||| ||||||||||||| ||||||    
T  10114541 ttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagctt 10114485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 12367564 - 12367504
Alignment:
Q  313 atttattttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    |||||||||||||||||| |||| | || ||||||||||||| ||||||| ||||| ||||    
T  12367564 atttattttttcaattaaaattgtagggataaaattgagatataaagtgacaagctctaag 12367504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 30013270 - 30013214
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||||||||| |||||| ||  |||||||||||||||||||| ||||||    
T  30013270 ttttcagcttatttccattagttctacaggatagcttatgaaaacagcttatagctt 30013214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 38648497 - 38648358
Alignment:
Q  2 ggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagcttttttca 94  Q
    |||||| ||||||| || |||||||||  ||||||||||   ||||||||||||||| || ||||||||||    |||||    ||| |||||||||| |    
T  38648497 ggattggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataagcttttttaa 38648398  T
Q  95 acttatttccataagttctccaaaatagcttatgaaaaca 134  Q
     | || || |||||||||| ||| ||||||||||||||||    
T  38648397 gcgtaatttcataagttctacaagatagcttatgaaaaca 38648358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 1058008 - 1058069
Alignment:
Q  9 cttatttgagcttatctactaccataagtttt---agactgtttgggagaactcatgaaaac 67  Q
    ||||||||||||||||||||  ||||||||||   ||||||||||||||||||  |||||||    
T  1058008 cttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaac 1058069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 2111080 - 2111013
Alignment:
Q  227 tgatcgaatttatagtgtttggtaaaattagccgtc-aagtagcttataagtatgaaatgacataaaa 293  Q
    |||| ||||||  ||||||||||||||||||| ||  || |||||||||| |||||||||||||||||    
T  2111080 tgattgaatttgcagtgtttggtaaaattagcggttgaactagcttataaatatgaaatgacataaaa 2111013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 9836877 - 9836924
Alignment:
Q  94 aacttatttccataagttctccaaaatagcttatgaaaacagcttgta 141  Q
    |||| ||||||||||| ||||||| ||||||||||||||||| |||||    
T  9836877 aactcatttccataagctctccaagatagcttatgaaaacaggttgta 9836924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 376
Target Start/End: Original strand, 21367134 - 21367233
Alignment:
Q  278 atgaaatgacataaaaagaggttcatttaagtaacatttattttttc-aattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    |||||||||||||||||  ||| ||||||| ||  ||| |||||||| ||||||||||||| | ||||| ||||| | |||  ||||||| |||||||||    
T  21367134 atgaaatgacataaaaaatggtacatttaattagtattaattttttccaattaagattgcaggagtaaagttgagttgaaagatgataagttataagcta 21367233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 28947420 - 28947471
Alignment:
Q  322 ttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataag 373  Q
    ||||||||||||| ||| |||||||||||||||||   ||||||||||||||    
T  28947420 ttcaattaagattacaatggtaaaattgagataaatgatgataagctataag 28947471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 42597496 - 42597453
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagctta 126  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||    
T  42597496 aagctgttttcaacttatttccataagttatccaagatagctta 42597453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 4762561 - 4762503
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctttt 147  Q
    |||||| ||||||| |||||| ||| ||| |||||||||||||||| |||| |||||||    
T  4762561 ttttcagcttatttacataagctcttcaagatagcttatgaaaacaacttgaagctttt 4762503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 5111605 - 5111659
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    ||||||||||||||||  || ||||||||| |||| ||||| |||||||||||||    
T  5111605 ttttttcaattaagataacatgggtaaaatcgagagaaaaaatgataagctataa 5111659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 7918452 - 7918514
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttg 139  Q
    ||||| ||||| ||| ||||||||||| ||||| ||||||| |||||||| ||||||| ||||    
T  7918452 gttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaacaacttg 7918514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 356
Target Start/End: Original strand, 24523775 - 24523813
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaa 356  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  24523775 ttttttcaattaagattgcaggggtaaacttgagataaa 24523813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 27754454 - 27754412
Alignment:
Q  91 ttcaacttatttccataagttctccaaaatagcttatgaaaac 133  Q
    |||| ||||||| |||||| |||||||||||||||||||||||    
T  27754454 ttcagcttattttcataagctctccaaaatagcttatgaaaac 27754412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 28763498 - 28763366
Alignment:
Q  18 gcttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacatcgttcaaaagc-ttttttcaacttatttccataag 109  Q
    ||||||||| || ||||||||||   |||||||||||||||||| ||||||||||    | |||   |||| |||| |||||||||||||||| ||||||    
T  28763498 gcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttttcaacttattt-cataag 28763400  T
Q  110 ttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    |||  ||| ||||||||| |||||| ||| ||||    
T  28763399 ttcagcaatatagcttataaaaacaacttctagc 28763366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 38289015 - 38289057
Alignment:
Q  406 tataagttataagt-caaaaacatgtcttaccaaacagaccct 447  Q
    |||||||||||||| |||||||||||||||||||||| |||||    
T  38289015 tataagttataagttcaaaaacatgtcttaccaaacataccct 38289057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 44236841 - 44236887
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacag 135  Q
    |||||| ||||||| |||||| ||||||| |||||||||||||||||    
T  44236841 ttttcagcttattttcataagctctccaatatagcttatgaaaacag 44236887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 1433600 - 1433551
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||| ||||    
T  1433600 ttttcaacttattttcataagctctccaggatagcttatgaaaactgctt 1433551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 2482927 - 2482861
Alignment:
Q  77 gttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| ||||| |||||| |||||||| ||||||| ||||| |||||  ||||||||||||| ||||||    
T  2482927 gttcataagctgttttcagcttatttctataagttatccaagatagc--atgaaaacagcttatagctt 2482861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 6864477 - 6864522
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| |||||||||  ||| ||||||||||||||||||||||||    
T  6864477 ttttcagcttatttcctcaagctctccaaaatagcttatgaaaaca 6864522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 6875283 - 6875328
Alignment:
Q  87 ttttttcaacttatttccataagttctccaaaatagcttatgaaaa 132  Q
    |||||||||||||||||| |||| ||||||| ||||| ||||||||    
T  6875283 ttttttcaacttatttccttaagctctccaagatagcatatgaaaa 6875328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 9956832 - 9956877
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||||| ||||||| |||||||||||||| |||| |||||||||||    
T  9956832 ttttcagcttattttcataagttctccaagatagattatgaaaaca 9956877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 11183603 - 11183542
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagct 144  Q
    ||||| |||||| |||||||||||||| ||||||   |||||| |||||||||||| |||||    
T  11183603 aagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagct 11183542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 11861867 - 11861802
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagc 143  Q
    ||||||||||||||| ||| ||||| ||||||||||| |  ||||||||| |||||| ||| ||||    
T  11861867 ttcaaaagctttttttaacgtattttcataagttctctattatagcttataaaaacaacttatagc 11861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 23775177 - 23775128
Alignment:
Q  88 tttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 137  Q
    |||||||| |||||| |||||||| |||||  ||||||||||||||||||    
T  23775177 tttttcaaattattttcataagttttccaatgtagcttatgaaaacagct 23775128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 24558918 - 24558849
Alignment:
Q  76 cgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| ||||| | |||||||||||| ||| |  ||||||| |||||||||||||||| ||| ||||||    
T  24558918 cgttcataagctatgttcaacttatttacattaagtctccaagatagcttatgaaaacaacttatagctt 24558849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 29692280 - 29692227
Alignment:
Q  319 tttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataa 372  Q
    ||||||||||||||||| | ||||||||| ||||||||| ||||| || |||||    
T  29692280 tttttcaattaagattgtatgggtaaaatcgagataaaatgtgatgagttataa 29692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 145
Target Start/End: Original strand, 32841341 - 32841382
Alignment:
Q  104 cataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||| |||||||| |||||||||||||||||||| ||||||    
T  32841341 cataacttctccaagatagcttatgaaaacagcttatagctt 32841382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 371
Target Start/End: Complemental strand, 35764708 - 35764655
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctata 371  Q
    |||||||||||| || | ||||||||||||||| ||||| | ||||||||||||    
T  35764708 ttttttcaattatgaatacaagggtaaaattgaaataaataatgataagctata 35764655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 4767540 - 4767481
Alignment:
Q  319 tttttcaattaagattgcaagggtaaaattgagataaaa--agtgataagctataagcta 376  Q
    |||||||||||||  | ||||||||||||||||||||||  | ||||||| |||||||||    
T  4767540 tttttcaattaaggctacaagggtaaaattgagataaaaacaatgataaggtataagcta 4767481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 7918791 - 7918847
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    |||||| |||||||||| ||| ||| ||| |||||||||||||||| ||| ||||||    
T  7918791 ttttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatagctt 7918847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15180686 - 15180646
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttta 41  Q
    ||||||| |||||||||| ||||||||| ||||||||||||    
T  15180686 tggattggcttatttgagtttatctactgccataagtttta 15180646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 27049438 - 27049363
Alignment:
Q  69 gtgacatcgttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagcttgtagctt 145  Q
    ||||||| ||||| | ||| |||||| ||||||| ||||| ||||||||| ||||||||||||| || || ||||||    
T  27049438 gtgacattgttcatatgctgttttcatcttattttcataatttctccaaa-tagcttatgaaaaaagtttatagctt 27049363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29818867 - 29818925
Alignment:
Q  1 tggattgacttatttgagcttatctactaccataagtttt---agactgtttgggagaa 56  Q
    ||||||| | ||||||||||||||||||| ||||||||||   ||||||||| ||||||    
T  29818867 tggattggcatatttgagcttatctactatcataagttttgtgagactgtttcggagaa 29818925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 58805 - 58749
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttctccaaaatagcttatgaaaaca 134  Q
    |||| ||||||||||||||||| || |||||||||| ||| ||||||||||||||||    
T  58805 ttcataagcttttttcaacttaatttcataagttcttcaacatagcttatgaaaaca 58749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 22289 - 22234
Alignment:
Q  83 aagcttttttcaacttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||||||||| ||||||| |||||||| ||||| ||||||||||| ||||||||    
T  22289 aagcttttttcagcttattttcataagttttccaacatagcttatgataacagctt 22234  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 166704 - 166646
Alignment:
Q  318 ttttttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||||||||||||||| |||||||||||| ||||||||   |||||||||||| ||||    
T  166704 ttttttcaattaagattacaagggtaaaatagagataaatgatgataagctataggcta 166646  T

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Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 166814 - 166740
Alignment:
Q  217 ataacctagttgatcgaatttatagtgtttggtaaaattagccg-tcaagtagcttataagtatgaaatgacata 290  Q
    |||| |||| |||| |||||| |||||||||||||||||||| | | || |||||||||| ||||||||||||||    
T  166814 ataagctagctgattgaatttgtagtgtttggtaaaattagcggttgaactagcttataaatatgaaatgacata 166740  T

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Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 338994 - 339048
Alignment:
Q  322 ttcaattaagattgcaagggtaaaattgagataaaaagtgataagctataagcta 376  Q
    ||||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||    
T  338994 ttcaagtaagattgcaggggtgaaatcgagataaaaggtgataagctataagcta 339048  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 113
Target Start/End: Complemental strand, 52040 - 52005
Alignment:
Q  78 ttcaaaagcttttttcaacttatttccataagttct 113  Q
    ||||||||||||||||||||||||| ||||||||||    
T  52040 ttcaaaagcttttttcaacttattttcataagttct 52005  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 21311 - 21352
Alignment:
Q  97 ttatttccataagttctccaaaatagcttatgaaaacagctt 138  Q
    |||||| ||||| |||||||| ||||||||||||||||||||    
T  21311 ttattttcataatttctccaatatagcttatgaaaacagctt 21352  T

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Target: scaffold0147 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 23683 - 23639
Alignment:
Q  89 ttttcaacttatttccataagttctccaaaatagcttatgaaaac 133  Q
    |||||||||||||| || ||||||||||| ||||||||| |||||    
T  23683 ttttcaacttattttcacaagttctccaatatagcttataaaaac 23639  T

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