View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11892_low_30 (Length: 271)
Name: NF11892_low_30
Description: NF11892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11892_low_30 |
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Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 36025604 - 36025842
Alignment:
| Q |
14 |
gaagcataggacaaaaacctaatgaagcaggaattgaacctgttaacctattattgaagagttgaacacctcttagattgttgagaagtcctaatgttga |
113 |
Q |
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| T |
36025604 |
gaagcataggacaaaaacctaatgaagcaggaattgaacctgttaacctattattgaagagttgaacacctcttagattgttgagaagtcctaatgttga |
36025703 |
T |
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| Q |
114 |
agggattgaaccaccaatttggttattatgaagactaagctttcttagaccttcaagttgaccaatcctttcagtgattctccccttcaatcctttccat |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
36025704 |
agggattgaaccaccaatttggttattatgaagactaagctttctaagaccttcaagttgaccaatcctctcagtgattctccccttcaatcctttccat |
36025803 |
T |
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| Q |
214 |
ggaagctgaattataatcacttttccttgagcacatttg |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
36025804 |
ggaagctgaattataatcacttttccttgagcacatttg |
36025842 |
T |
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