View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11893_high_20 (Length: 210)
Name: NF11893_high_20
Description: NF11893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11893_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 19 - 193
Target Start/End: Complemental strand, 42718896 - 42718722
Alignment:
| Q |
19 |
acgtttaccatataatttgactggggtaaaatgtttaagcaaagatggaaaaaagaaaagtaacacctcaaaccaagaaagagacaaatatatccctaaa |
118 |
Q |
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| T |
42718896 |
acgtttaccatataatttgactggggtaaaatgtttaagcaaagatggaaaaaagaaaagtaaaacctcaaaccaagaaagagacaaatatatccctaaa |
42718797 |
T |
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| Q |
119 |
gagaaaacaagcaacactgtatatcactcaaggctacaatgaataatctttcattcttatctagctctaccccta |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42718796 |
gagaaaacaagcaacactgtatatcactcaaggctacaatgaataatctttcattcttatctagctctaccccta |
42718722 |
T |
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