View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11894_high_19 (Length: 405)

Name: NF11894_high_19
Description: NF11894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11894_high_19
NF11894_high_19
[»] chr4 (37 HSPs)
chr4 (6-389)||(32966368-32966724)
chr4 (140-201)||(50503252-50503313)
chr4 (134-188)||(4390776-4390830)
chr4 (140-200)||(30561432-30561492)
chr4 (129-193)||(45780100-45780164)
chr4 (135-190)||(20148066-20148121)
chr4 (15-66)||(32955426-32955477)
chr4 (132-202)||(5460076-5460146)
chr4 (131-181)||(21370566-21370616)
chr4 (135-193)||(45906887-45906945)
chr4 (135-193)||(53407908-53407966)
chr4 (132-181)||(4516511-4516560)
chr4 (134-215)||(11051106-11051187)
chr4 (132-181)||(11151263-11151312)
chr4 (140-193)||(12233315-12233368)
chr4 (134-215)||(40496773-40496854)
chr4 (134-194)||(22431541-22431601)
chr4 (140-184)||(33116827-33116871)
chr4 (132-168)||(40120667-40120703)
chr4 (134-181)||(4392067-4392114)
chr4 (134-181)||(7707138-7707185)
chr4 (134-181)||(8942640-8942687)
chr4 (134-181)||(22037694-22037741)
chr4 (134-181)||(27184969-27185016)
chr4 (135-202)||(33510111-33510178)
chr4 (135-202)||(37971045-37971112)
chr4 (134-181)||(43225062-43225109)
chr4 (134-181)||(56373209-56373256)
chr4 (135-181)||(27397100-27397146)
chr4 (135-181)||(29414263-29414309)
chr4 (131-181)||(37114633-37114683)
chr4 (131-180)||(4354957-4355006)
chr4 (132-181)||(8829135-8829184)
chr4 (135-180)||(11601438-11601483)
chr4 (129-178)||(42123864-42123913)
chr4 (132-181)||(56269411-56269460)
chr4 (133-193)||(31679604-31679664)
[»] chr1 (27 HSPs)
chr1 (132-202)||(7780486-7780556)
chr1 (134-215)||(40720218-40720299)
chr1 (134-193)||(13120940-13120999)
chr1 (146-201)||(41004345-41004400)
chr1 (133-215)||(42613431-42613513)
chr1 (132-181)||(36300422-36300471)
chr1 (128-193)||(41150561-41150626)
chr1 (133-181)||(44910595-44910643)
chr1 (126-181)||(1918821-1918876)
chr1 (138-209)||(25135738-25135809)
chr1 (134-181)||(29379775-29379822)
chr1 (134-181)||(29586931-29586978)
chr1 (142-193)||(33152698-33152749)
chr1 (134-181)||(39827337-39827384)
chr1 (134-181)||(42063611-42063658)
chr1 (135-181)||(15314018-15314064)
chr1 (134-180)||(19898241-19898287)
chr1 (135-181)||(26205072-26205118)
chr1 (134-180)||(29703526-29703572)
chr1 (135-181)||(30780064-30780110)
chr1 (131-181)||(32367706-32367756)
chr1 (135-181)||(33561201-33561247)
chr1 (135-180)||(7710311-7710356)
chr1 (133-181)||(27642569-27642617)
chr1 (134-194)||(34319295-34319355)
chr1 (133-177)||(36838021-36838065)
chr1 (132-168)||(49219786-49219822)
[»] chr6 (20 HSPs)
chr6 (135-207)||(21897482-21897554)
chr6 (135-214)||(5300925-5301004)
chr6 (131-193)||(28077219-28077281)
chr6 (131-181)||(34684368-34684418)
chr6 (132-181)||(28721112-28721161)
chr6 (133-181)||(1805719-1805767)
chr6 (134-181)||(559081-559128)
chr6 (134-181)||(2443194-2443241)
chr6 (131-209)||(6830781-6830866)
chr6 (134-209)||(22756993-22757068)
chr6 (134-181)||(27719941-27719988)
chr6 (135-181)||(6709047-6709093)
chr6 (131-181)||(7316926-7316976)
chr6 (135-181)||(12140154-12140200)
chr6 (135-193)||(32732541-32732599)
chr6 (135-181)||(34232222-34232268)
chr6 (140-181)||(31451307-31451348)
chr6 (173-214)||(33454492-33454533)
chr6 (135-180)||(34904682-34904727)
chr6 (132-168)||(10856875-10856911)
[»] chr5 (34 HSPs)
chr5 (140-217)||(36027269-36027346)
chr5 (134-193)||(5997247-5997306)
chr5 (132-214)||(8285543-8285625)
chr5 (143-188)||(33695364-33695409)
chr5 (134-202)||(36686568-36686636)
chr5 (134-181)||(2179492-2179539)
chr5 (130-193)||(12362952-12363015)
chr5 (134-193)||(13227902-13227961)
chr5 (133-200)||(22976390-22976457)
chr5 (134-180)||(35640687-35640733)
chr5 (135-200)||(5381186-5381251)
chr5 (135-180)||(6603264-6603309)
chr5 (134-181)||(2672172-2672219)
chr5 (134-181)||(8023285-8023332)
chr5 (134-193)||(32383589-32383648)
chr5 (134-181)||(39276169-39276216)
chr5 (130-168)||(1710550-1710588)
chr5 (140-194)||(2498428-2498482)
chr5 (134-188)||(11061819-11061873)
chr5 (135-181)||(12714052-12714098)
chr5 (135-181)||(12775280-12775326)
chr5 (135-181)||(13156239-13156285)
chr5 (134-184)||(15531199-15531249)
chr5 (134-180)||(25871661-25871707)
chr5 (135-181)||(43403233-43403279)
chr5 (132-181)||(1175564-1175613)
chr5 (291-328)||(1942839-1942876)
chr5 (140-193)||(9586489-9586542)
chr5 (140-181)||(15444199-15444240)
chr5 (140-209)||(26698350-26698419)
chr5 (140-209)||(26968082-26968151)
chr5 (132-181)||(35235078-35235127)
chr5 (132-181)||(35235892-35235941)
chr5 (133-181)||(16856319-16856367)
[»] chr2 (26 HSPs)
chr2 (134-215)||(38843561-38843642)
chr2 (134-214)||(5519358-5519438)
chr2 (134-202)||(8705836-8705904)
chr2 (134-202)||(43506897-43506965)
chr2 (134-181)||(24401447-24401494)
chr2 (134-193)||(37000220-37000279)
chr2 (134-181)||(39168511-39168558)
chr2 (144-193)||(650148-650197)
chr2 (133-194)||(2046465-2046526)
chr2 (131-200)||(4056684-4056753)
chr2 (135-200)||(7399618-7399683)
chr2 (132-193)||(9887720-9887781)
chr2 (133-202)||(31615709-31615778)
chr2 (132-193)||(43136388-43136449)
chr2 (133-181)||(28381977-28382025)
chr2 (134-181)||(2545751-2545798)
chr2 (132-215)||(13762509-13762592)
chr2 (135-194)||(24020632-24020691)
chr2 (131-202)||(41796067-41796138)
chr2 (135-181)||(4452855-4452901)
chr2 (132-178)||(5040536-5040582)
chr2 (135-181)||(13527267-13527313)
chr2 (135-181)||(36711838-36711884)
chr2 (140-181)||(18710917-18710958)
chr2 (134-202)||(9052362-9052430)
chr2 (140-188)||(26912381-26912429)
[»] chr8 (16 HSPs)
chr8 (134-209)||(44157993-44158068)
chr8 (132-181)||(10619612-10619661)
chr8 (164-217)||(36590984-36591037)
chr8 (134-202)||(17116265-17116333)
chr8 (134-193)||(31687410-31687469)
chr8 (138-214)||(18411420-18411489)
chr8 (131-181)||(31582494-31582544)
chr8 (132-181)||(25024126-25024175)
chr8 (135-181)||(32541962-32542008)
chr8 (135-193)||(37586563-37586621)
chr8 (138-183)||(1363143-1363188)
chr8 (140-181)||(28710064-28710105)
chr8 (140-181)||(28717411-28717452)
chr8 (140-181)||(30338304-30338345)
chr8 (140-181)||(39872026-39872067)
chr8 (134-194)||(44318979-44319039)
[»] chr7 (19 HSPs)
chr7 (131-181)||(33203001-33203051)
chr7 (130-181)||(47470378-47470429)
chr7 (140-199)||(47585144-47585203)
chr7 (131-181)||(42375152-42375202)
chr7 (132-181)||(36245741-36245790)
chr7 (132-181)||(42586746-42586795)
chr7 (277-337)||(22642384-22642444)
chr7 (135-187)||(48730277-48730329)
chr7 (133-188)||(790607-790662)
chr7 (138-169)||(34351304-34351335)
chr7 (138-193)||(45673115-45673170)
chr7 (134-181)||(45686223-45686270)
chr7 (135-209)||(40894146-40894220)
chr7 (135-181)||(43254932-43254978)
chr7 (135-181)||(48831421-48831467)
chr7 (291-328)||(22621592-22621629)
chr7 (140-181)||(34709979-34710020)
chr7 (140-181)||(46878632-46878673)
chr7 (146-190)||(11465387-11465431)
[»] chr3 (32 HSPs)
chr3 (140-193)||(48943331-48943384)
chr3 (133-193)||(38186519-38186579)
chr3 (140-200)||(45369647-45369707)
chr3 (134-209)||(2852637-2852712)
chr3 (140-207)||(24627462-24627529)
chr3 (134-193)||(29080618-29080677)
chr3 (135-181)||(25571149-25571195)
chr3 (131-181)||(40562673-40562723)
chr3 (140-214)||(52226098-52226172)
chr3 (140-193)||(21707847-21707900)
chr3 (132-181)||(29717563-29717612)
chr3 (140-193)||(35500389-35500442)
chr3 (132-193)||(41519302-41519363)
chr3 (132-181)||(55227123-55227172)
chr3 (133-181)||(2579339-2579387)
chr3 (134-190)||(44946523-44946579)
chr3 (133-201)||(46972782-46972850)
chr3 (134-181)||(37528084-37528131)
chr3 (134-181)||(43526493-43526540)
chr3 (139-181)||(4241052-4241094)
chr3 (126-180)||(40479397-40479451)
chr3 (139-181)||(44846364-44846406)
chr3 (140-173)||(1265226-1265259)
chr3 (132-181)||(19947655-19947704)
chr3 (132-181)||(37089029-37089078)
chr3 (172-217)||(46318045-46318090)
chr3 (140-188)||(32025583-32025631)
chr3 (131-215)||(32981845-32981929)
chr3 (132-180)||(45344378-45344426)
chr3 (129-181)||(52165408-52165460)
chr3 (140-188)||(52867516-52867564)
chr3 (128-168)||(54541381-54541421)
[»] scaffold0009 (1 HSPs)
scaffold0009 (135-211)||(192804-192880)
[»] scaffold0031 (1 HSPs)
scaffold0031 (135-193)||(129503-129561)
[»] scaffold0418 (1 HSPs)
scaffold0418 (134-215)||(5181-5262)
[»] scaffold0197 (1 HSPs)
scaffold0197 (132-181)||(28361-28410)
[»] scaffold0016 (1 HSPs)
scaffold0016 (134-202)||(92842-92910)
[»] scaffold0349 (1 HSPs)
scaffold0349 (134-181)||(9363-9410)
[»] scaffold0116 (1 HSPs)
scaffold0116 (134-181)||(25664-25711)
[»] scaffold0246 (1 HSPs)
scaffold0246 (135-181)||(7797-7843)
[»] scaffold0173 (1 HSPs)
scaffold0173 (135-181)||(22220-22266)
[»] scaffold0122 (1 HSPs)
scaffold0122 (135-181)||(11783-11829)
[»] scaffold0041 (1 HSPs)
scaffold0041 (135-209)||(72064-72138)
[»] scaffold0027 (1 HSPs)
scaffold0027 (135-181)||(41063-41109)
[»] scaffold0362 (1 HSPs)
scaffold0362 (132-193)||(6157-6218)


Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 6 - 389
Target Start/End: Complemental strand, 32966724 - 32966368
Alignment:
Q  6 agaagtattaccaagaaggaaatccccatgactattgtttcccatgaccactgcagaaaaaccacaaataacatttttaaaaatctaccaagtataagtc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32966724 agaagtattaccaagaaggaaatccccatgactattgtttcccatgaccactgcagaaaaaccacaaataacatttttaaaaatctaccaagtataagtc 32966625  T
Q  106 ttttgcgaaagggaaaaaagtttgtttaa-ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtt 204  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 
T  32966624 ttttgggaaagggaaaaaagtgtgtttaagggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttg------------- 32966538  T
Q  205 tatagttgatggccgatatcttatatagtttatagctgatagatgatagttgatagctgatagcagataagctatatgttatctgctataagctataagt 304  Q
     |||| |||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32966537 -atagctgatggccgatatcttatatagttt--------------atagttgatagctgatagcagataagctatatgttatatgctataagctataagt 32966453  T
Q  305 tagcttattggccttgccaaacagtccctaaatataagcttcatcttaaattaaattacaaacttatgagagagaaagtgttaat 389  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32966452 tagcttattgggcttgccaaacaggccctaaatataagcttcatcttaaattaaattacaaacttatgagagagaaagtgttaat 32966368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 50503313 - 50503252
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgata 201  Q
    ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||||||||||    
T  50503313 tgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgatggctgata 50503252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 4390776 - 4390830
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatag 188  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  4390776 aggctctgtttggtaaaaatagcggatagttgataagctagctgatagcttatag 4390830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 30561432 - 30561492
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgat 200  Q
    ||||||||||||||| ||||||| |||||| |||||| |||| ||||||||||| ||||||    
T  30561432 tgtttggtaaaaatagcggatagctgataagctagcttatagcttatagttgatagctgat 30561492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 45780100 - 45780164
Alignment:
Q  129 gtttaaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||||||||| ||||||||||||||| ||||||  |||||| ||||||||||| |||||| ||||    
T  45780100 gtttaaggctctgtttggtaaaaatagcggataactgataagctagctgatagcttatagctgat 45780164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 20148066 - 20148121
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagtt 190  Q
    |||| ||||||||||||| ||||||||| ||||||| ||| |||||||||||||||    
T  20148066 ggctctgtttggtaaaaacaacggatagctgataaattagttgatagtttatagtt 20148121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 32955477 - 32955426
Alignment:
Q  15 accaagaaggaaatccccatgactattgtttcccatgaccactgcagaaaaa 66  Q
    ||||||||| |||| ||||| |||||||||| ||||||||||||||||||||    
T  32955477 accaagaagcaaattcccatcactattgtttgccatgaccactgcagaaaaa 32955426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 5460076 - 5460146
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    ||||||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||| |||| ||| ||||    
T  5460076 taaggctctgtttggtaaaaatagcggatagcttataagctagctgatagcttatagctgatagcttatag 5460146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 21370616 - 21370566
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  21370616 ttaaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 21370566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 45906945 - 45906887
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  45906945 ggctctgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 45906887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 53407966 - 53407908
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  53407966 ggctctgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 53407908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 4516511 - 4516560
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||||||||||  |||||| |||||||||||    
T  4516511 taaggctctgtttggtaaaaataacggataactgataagctagctgatag 4516560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 11051187 - 11051106
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgatg 215  Q
    ||||||||||||||| |||||  |||||| | |||| ||||||||| | |||||| ||||| ||||||| |||||| |||||    
T  11051187 aggctttgtttggtagaaatagtggatagcttataagctagctgatggattatagctgatgactgatagcttatagctgatg 11051106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 11151263 - 11151312
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  11151263 taaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 11151312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 12233315 - 12233368
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||| ||||||||| |||||||||||||| ||||||||||| |||||| ||||    
T  12233315 tgtttagtaaaaatagcggatagttgataagctagctgatagcttatagctgat 12233368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 40496773 - 40496854
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgatg 215  Q
    ||||| ||||||||||||||| ||| ||| |||||| ||||||||||| |||||| ||| | ||||||| | |||| |||||    
T  40496773 aggctctgtttggtaaaaatagcggttagctgataagctagctgatagcttatagctgacgactgatagctgatagctgatg 40496854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 22431601 - 22431541
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatg 194  Q
    ||||| ||||||||||||||| ||||||| | |||| ||||||||||||| |||| |||||    
T  22431601 aggctctgtttggtaaaaatagcggatagcttataagctagctgatagttgatagctgatg 22431541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 33116871 - 33116827
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagttt 184  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||    
T  33116871 tgtttggtaaaaatagcggatagctgataagctagctgatagttt 33116827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 40120703 - 40120667
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgata 168  Q
    ||||||| |||||||||||||||||||||||||||||    
T  40120703 taaggctctgtttggtaaaaataacggatagttgata 40120667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 4392067 - 4392114
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  4392067 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 4392114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 7707185 - 7707138
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  7707185 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 7707138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 8942687 - 8942640
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  8942687 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 8942640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 22037694 - 22037741
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  22037694 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 22037741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 27184969 - 27185016
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  27184969 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 27185016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 33510178 - 33510111
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    |||| ||||| |||||||||||||||   |||||| ||||||||||| |||||| |||||||| ||||    
T  33510178 ggctctgttttgtaaaaataacggatgactgataagctagctgatagcttatagctgatggcttatag 33510111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 37971112 - 37971045
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    |||||||||||||||||||| ||||||| ||||||  ||| |||||| || ||| |||| ||||||||    
T  37971112 ggctttgtttggtaaaaatagcggatagctgataagttagttgatagcttttagctgatagctgatag 37971045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 43225062 - 43225109
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  43225062 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 43225109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 56373256 - 56373209
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  56373256 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 56373209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 27397100 - 27397146
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  27397100 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 27397146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 29414309 - 29414263
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  29414309 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 29414263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 37114633 - 37114683
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||| ||||||||||||||| | ||||| |||||| |||||||||||    
T  37114633 ttaaggctctgtttggtaaaaatagcagatagctgataagctagctgatag 37114683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 4354957 - 4355006
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    |||| ||| ||||| ||||||||||||||||| |||||| ||||||||||    
T  4354957 ttaaagctctgtttcgtaaaaataacggatagctgataagctagctgata 4355006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 8829135 - 8829184
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| | |||| |||||||||||    
T  8829135 taaggctctgtttggtaaaaatagcggatagctaataagctagctgatag 8829184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 11601483 - 11601438
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||||||    
T  11601483 ggctctgtttggtaaaaatagcggatagctgataagctagctgata 11601438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 42123864 - 42123913
Alignment:
Q  129 gtttaaggctttgtttggtaaaaataacggatagttgataaactagctga 178  Q
    |||| ||||||||||||||||||||| ||||||| |||||| ||| ||||    
T  42123864 gttttaggctttgtttggtaaaaatagcggatagctgataagctaactga 42123913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 56269411 - 56269460
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| | |||| |||||||||||    
T  56269411 taaggctctgtttggtaaaaatagcggatagcttataagctagctgatag 56269460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 31679664 - 31679604
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||||| ||||||||||||||| ||||||| ||||||  ||||| ||||||| ||| ||||    
T  31679664 aaggctctgtttggtaaaaatagcggatagctgataagttagctaatagtttttagctgat 31679604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 7780486 - 7780556
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    ||||||| ||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||    
T  7780486 taaggctctgtttggtaaaaataacggatagtttataagctagctgatagcttatagctgatggctgatag 7780556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 40720299 - 40720218
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgatg 215  Q
    ||||| ||||||||| |||||||||||   |||||| ||||||||||| |||||| |||||| |||||| |||||| |||||    
T  40720299 aggctctgtttggtagaaataacggatgactgataagctagctgatagcttatagctgatggttgatagcttatagctgatg 40720218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 13120940 - 13120999
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  13120940 aggctctgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 13120999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 41004345 - 41004400
Alignment:
Q  146 gtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgata 201  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| ||||| ||||||    
T  41004345 gtaaaaataacggatagttgataagatagctgatattttatagctgatgactgata 41004400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 42613431 - 42613513
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgatg 215  Q
    |||||| |||| |||||||||| |||||   |||||| ||||||||||| |||||| ||||||||||| | |||||| |||||    
T  42613431 aaggctatgttcggtaaaaatagcggatgactgataagctagctgatagcttatagctgatggctgatggcttatagctgatg 42613513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 36300422 - 36300471
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  36300422 taaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 36300471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 41150561 - 41150626
Alignment:
Q  128 tgtttaaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||| ||||| ||||||||||||||| ||||||| ||||||  ||||||||||||| ||| ||||    
T  41150561 tgttttaggctctgtttggtaaaaatagcggatagctgataagttagctgatagtttttagctgat 41150626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 44910643 - 44910595
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  44910643 aaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 44910595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 1918876 - 1918821
Alignment:
Q  126 tttgtttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| |||||||| ||||||||||||||| ||||||| |||||| |||| ||||||    
T  1918876 tttgattaaggctctgtttggtaaaaatagcggatagctgataagctagttgatag 1918821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 25135809 - 25135738
Alignment:
Q  138 tttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatag 209  Q
    ||||||||||||||||| ||||||  | |||||||| ||||||| |||||| | ||| || |||||||||||    
T  25135809 tttgtttggtaaaaatagcggataacttataaactaactgatagcttatagctcatgactaatagtttatag 25135738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 29379822 - 29379775
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  29379822 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 29379775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 29586978 - 29586931
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  29586978 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 29586931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 33152749 - 33152698
Alignment:
Q  142 tttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||| |||||||| ||||||| |||||| |||||||||||||||||| ||||    
T  33152749 tttgataaaaatagcggatagctgataagctagctgatagtttatagctgat 33152698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 39827384 - 39827337
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  39827384 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 39827337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 42063611 - 42063658
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  42063611 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 42063658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 15314064 - 15314018
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  15314064 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 15314018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 19898241 - 19898287
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||||||    
T  19898241 aggctctgtttggtaaaaatagcggatagctgataagctagctgata 19898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 26205118 - 26205072
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  26205118 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 26205072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29703526 - 29703572
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||||||    
T  29703526 aggctctgtttggtaaaaatagcggatagctgataagctagctgata 29703572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 30780110 - 30780064
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  30780110 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 30780064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 32367706 - 32367756
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||| ||||||||||||||| ||||||| ||||||  ||||||||||    
T  32367706 ttaaggctctgtttggtaaaaatagcggatagctgataagttagctgatag 32367756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 33561201 - 33561247
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  33561201 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 33561247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 7710311 - 7710356
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||||||    
T  7710311 ggctctgtttggtaaaaatagcggatagctgataagctagctgata 7710356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 27642569 - 27642617
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||| |||||||||||||||| ||||| ||||||| |||| ||||||    
T  27642569 aaggctatgtttggtaaaaataatggataattgataagctagttgatag 27642617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 34319355 - 34319295
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatg 194  Q
    ||||| ||||||||||||||| ||||||| | ||||  |||||||||| |||||| |||||    
T  34319355 aggctctgtttggtaaaaatagcggatagcttataagttagctgatagcttatagctgatg 34319295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 36838021 - 36838065
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctg 177  Q
    |||||| ||||||||||||||| ||||||| |||||| |||||||    
T  36838021 aaggctctgtttggtaaaaatagcggatagctgataagctagctg 36838065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 49219786 - 49219822
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgata 168  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  49219786 taaggctctgtttggtaaaaatagcggatagttgata 49219822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 21897554 - 21897482
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttat 207  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||| |||||||| || |||||||||||||    
T  21897554 ggctttgtttggtaaaaataacggatagtttataagctagttgatagcttatagtttatagctgatagtttat 21897482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 5300925 - 5301004
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgat 214  Q
    |||| ||||||||||||||| ||||||||| |||| |||||| |||| |||||| ||||| ||||||| |||||| ||||    
T  5300925 ggctctgtttggtaaaaatagcggatagtttataagctagcttatagcttatagctgatgactgatagcttatagctgat 5301004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 28077281 - 28077219
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||||||| ||||||||||||||| ||||||||| |||| ||| ||||||| |||||| ||||    
T  28077281 ttaaggctctgtttggtaaaaatagcggatagtttataagctacctgatagcttatagctgat 28077219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 34684368 - 34684418
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  34684368 ttaaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 34684418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 28721112 - 28721161
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  28721112 taaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 28721161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 1805719 - 1805767
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  1805719 aaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 1805767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 559128 - 559081
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  559128 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 559081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 2443241 - 2443194
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  2443241 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 2443194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 6830866 - 6830781
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaacta-------gctgatagtttatagttgatggctgatagtttatag 209  Q
    |||||| | ||||||||||| |||| ||||||||||||| |||       |||||| |||||||||||||| ||||||||||||||    
T  6830866 ttaaggatctgtttggtaaatataatggatagttgataagctaaccaatagctgatggtttatagttgatgactgatagtttatag 6830781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 22757068 - 22756993
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatag 209  Q
    ||||| ||||||||||||||| ||||||| | ||||  ||||| |||| |||||| |||| |||||||| ||||||    
T  22757068 aggctctgtttggtaaaaatagcggatagcttataagttagcttatagcttatagctgatagctgatagcttatag 22756993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 27719941 - 27719988
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  27719941 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 27719988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 6709047 - 6709093
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  6709047 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 6709093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 7316926 - 7316976
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||| ||||||||||||||| ||||||| | |||| |||||||||||    
T  7316926 ttaaggctctgtttggtaaaaatagcggatagcttataagctagctgatag 7316976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 12140154 - 12140200
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||  ||||||||||||||||||    
T  12140154 ggctctgtttggtaaaaatagcggataactgataaactagctgatag 12140200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 32732599 - 32732541
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||| ||||||||||||||| ||||||| |||||| |||| |||||| |||||| ||||    
T  32732599 ggctctgtttggtaaaaatagcggatagctgataagctagatgatagcttatagctgat 32732541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 34232222 - 34232268
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  34232222 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 34232268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 31451307 - 31451348
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||||||||| ||||||| |||||| |||||||||||    
T  31451307 tgtttggtaaaaatagcggatagctgataagctagctgatag 31451348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 33454533 - 33454492
Alignment:
Q  173 agctgatagtttatagttgatggctgatagtttatagttgat 214  Q
    |||||||||||||||| ||||||||||||| |||||| ||||    
T  33454533 agctgatagtttatagctgatggctgatagcttatagctgat 33454492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 34904727 - 34904682
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    |||| ||||||||||||||||||||||| ||||||  |||||||||    
T  34904727 ggctctgtttggtaaaaataacggatagctgataagttagctgata 34904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 10856911 - 10856875
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgata 168  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  10856911 taaggctttgtttggtaaaaatagcggatagctgata 10856875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 36027269 - 36027346
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgatggc 217  Q
    ||||||||||||||| |||||  |||||||||||| |||||| |||||  ||||||||||||| ||||||||||||||    
T  36027269 tgtttggtaaaaatagcggatgattgataaactagttgatagattataactgatggctgatagcttatagttgatggc 36027346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 5997247 - 5997306
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||||||||| ||||    
T  5997247 aggctctgtttggtaaaaatagcggatagctgataagctagctgatagtttatagctgat 5997306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 8285625 - 8285543
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgat 214  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||| |||| |||||  ||| | |||||||||||||| ||||    
T  8285625 taaggctctgtttggtaaaaatagcggatagctgataagctagcttatagcttataagtgaagactgatagtttatagctgat 8285543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 33695409 - 33695364
Alignment:
Q  143 ttggtaaaaataacggatagttgataaactagctgatagtttatag 188  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||    
T  33695409 ttggtaaaaatagcggatagttgataagctagctgatagtttatag 33695364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 36686636 - 36686568
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||||| ||| |||| ||| ||||    
T  36686636 aggctctgtttggtaaaaatagcggatagctgataagctagctgatagtttttagctgatagcttatag 36686568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 2179539 - 2179492
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  2179539 aggctctgtttggtaaaaatagcggatagttgataagctagctgatag 2179492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 12362952 - 12363015
Alignment:
Q  130 tttaaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||||| || ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  12362952 tttaagactctgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 12363015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 13227902 - 13227961
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  13227902 aggctctgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 13227961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 22976390 - 22976457
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgat 200  Q
    |||||| || |||||||||||| ||||||| |||||| |||||| ||||||||||| |||| ||||||    
T  22976390 aaggctctgcttggtaaaaatagcggatagctgataagctagcttatagtttatagctgatagctgat 22976457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 35640733 - 35640687
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  35640733 aggctctgtttggtaaaaatagcggatagttgataagctagctgata 35640687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 5381186 - 5381251
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgat 200  Q
    |||| ||||||||||||||| ||||||| |||||| |||||| |||| |||||| |||| ||||||    
T  5381186 ggctctgtttggtaaaaatagcggatagctgataagctagcttatagcttatagctgatagctgat 5381251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 6603264 - 6603309
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||||    
T  6603264 ggctctgtttggtaaaaatagcggatagctgataaactagctgata 6603309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 2672219 - 2672172
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  2672219 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 2672172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 8023285 - 8023332
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  8023285 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 8023332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 32383648 - 32383589
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||| ||||||||||||||| ||||||| ||||||  ||||||||||||| ||| ||||    
T  32383648 aggctctgtttggtaaaaatagcggatagctgataagttagctgatagtttttagctgat 32383589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 39276216 - 39276169
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  39276216 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 39276169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 1710550 - 1710588
Alignment:
Q  130 tttaaggctttgtttggtaaaaataacggatagttgata 168  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  1710550 tttaaggctctgtttggtaaaaatagcggatagttgata 1710588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 2498482 - 2498428
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatg 194  Q
    |||||| ||||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  2498482 tgtttgataaaaataacgtatagctgataagttagctgatagtttatagctgatg 2498428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 188
Target Start/End: Original strand, 11061819 - 11061873
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatag 188  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||| |||| ||||||    
T  11061819 aggctctgtttggtaaaaatagcggatagctgataagctagcttatagcttatag 11061873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 12714098 - 12714052
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  12714098 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 12714052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 12775326 - 12775280
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  12775326 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 12775280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 13156239 - 13156285
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  13156239 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 13156285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 15531249 - 15531199
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagttt 184  Q
    ||||| ||||||||||||||| ||||||| ||||||  |||||||||||||    
T  15531249 aggctctgtttggtaaaaatagcggatagctgataagttagctgatagttt 15531199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 25871661 - 25871707
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    ||||| |||||| |||||||| ||||||| |||||||||||||||||    
T  25871661 aggctctgtttgataaaaatagcggatagctgataaactagctgata 25871707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 43403279 - 43403233
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  43403279 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 43403233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 1175613 - 1175564
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| | |||| |||||||||||    
T  1175613 taaggctctgtttggtaaaaatagcggatagcttataagctagctgatag 1175564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 1942876 - 1942839
Alignment:
Q  291 tataagctataagttagcttattggccttgccaaacag 328  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  1942876 tataagctataagttagtttattggtcttgccaaacag 1942839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 9586489 - 9586542
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||||||||||| ||||||| ||||||  ||||||||||||| ||| ||||    
T  9586489 tgtttggtaaaaatagcggatagctgataagttagctgatagtttttagctgat 9586542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 15444240 - 15444199
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||||||||| ||||||| |||||| |||||||||||    
T  15444240 tgtttggtaaaaatagcggatagctgataagctagctgatag 15444199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 26698350 - 26698419
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatag 209  Q
    |||||| |||||||||||||||  ||||||  ||||| |||| |||||| ||||| ||||||| ||||||    
T  26698350 tgtttgataaaaataacggataactgataagttagcttatagcttatagctgatgactgatagcttatag 26698419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 26968082 - 26968151
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatag 209  Q
    |||||| |||||||||||||||  ||||||  ||||| |||| |||||| ||||| ||||||| ||||||    
T  26968082 tgtttgataaaaataacggataactgataagttagcttatagcttatagctgatgactgatagcttatag 26968151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 35235078 - 35235127
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| ||||||  ||||||||||    
T  35235078 taaggctctgtttggtaaaaatagcggatagctgataagttagctgatag 35235127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 35235892 - 35235941
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| ||||||  ||||||||||    
T  35235892 taaggctctgtttggtaaaaatagcggatagctgataagttagctgatag 35235941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 16856319 - 16856367
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||| ||||||||||||||| ||||||| |||||| |||| ||||||    
T  16856319 aaggctctgtttggtaaaaatagcggatagctgataagctagttgatag 16856367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 38843642 - 38843561
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgatg 215  Q
    ||||||||||||||||||| | ||||||| |||||| |||||||||||||||||| |||| | |||||| |||||| |||||    
T  38843642 aggctttgtttggtaaaaacagcggatagctgataagctagctgatagtttatagctgatagttgatagcttatagctgatg 38843561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 5519358 - 5519438
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgat 214  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||  |||||| |||||| ||||    
T  5519358 aggctctgtttggtaaaaataacggatagctgataaactagcttatagctgatagttgatgaatgatagcttatagctgat 5519438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 8705836 - 8705904
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||||| ||| |||| ||| ||||    
T  8705836 aggctctgtttggtaaaaatagcggatagctgataagctagctgatagtttttagctgatagcttatag 8705904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 43506897 - 43506965
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||| || ||| |||| ||| ||||    
T  43506897 aggctctgtttggtaaaaataacggatagctgataagctagctgatagcttttagctgatagcttatag 43506965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 24401447 - 24401494
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  24401447 aggctctgtttggtaaaaatagcggatagctgataaactagctgatag 24401494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 37000279 - 37000220
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||| ||||||||||||||| |||||||||||||| |||| ||||||||| ||| ||||    
T  37000279 aggctctgtttggtaaaaatagcggatagttgataagctagttgatagtttttagctgat 37000220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 39168558 - 39168511
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  39168558 aggctctgtttggtaaaaataacggatagttgataagctagttgatag 39168511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 650148 - 650197
Alignment:
Q  144 tggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||||||| |||||||||||||| |||||||||||||| ||| ||||    
T  650148 tggtaaaaatagcggatagttgataagctagctgatagtttttagctgat 650197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 2046465 - 2046526
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatg 194  Q
    |||||| ||||||||||||||| |||||  ||||||| |||||| ||||||||||| |||||    
T  2046465 aaggctctgtttggtaaaaatagcggatgattgataagctagcttatagtttatagctgatg 2046526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 4056753 - 4056684
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgat 200  Q
    |||| ||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||| ||||| |||||    
T  4056753 ttaaagctctgtttggtaaaaatagcggatagcttataagctagctgatagcttatagctgatgactgat 4056684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 7399618 - 7399683
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgat 200  Q
    |||| ||||||||||||||| ||||||| |||||| |||||| |||| |||||| |||| ||||||    
T  7399618 ggctctgtttggtaaaaatagcggatagctgataagctagcttatagcttatagctgatagctgat 7399683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 9887781 - 9887720
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||| ||||||||||||||| ||||||| ||||||  |||||||||| |||||| ||||    
T  9887781 taaggctctgtttggtaaaaatagcggatagctgataagttagctgatagcttatagctgat 9887720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 31615709 - 31615778
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    |||||| |||||||||||||||  |||||| |||||||||||||||||| || ||| |||| ||| ||||    
T  31615709 aaggctctgtttggtaaaaatagtggatagctgataaactagctgatagcttttagctgatagcttatag 31615778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 43136449 - 43136388
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||| ||||||||||||||| ||||||| ||||||  |||||||||| |||||| ||||    
T  43136449 taaggctctgtttggtaaaaatagcggatagctgataaggtagctgatagcttatagctgat 43136388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 28381977 - 28382025
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  28381977 aaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 28382025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 2545751 - 2545798
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  2545751 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 2545798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 13762592 - 13762509
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgatg 215  Q
    ||||||| |||||| |||||||| ||||||| | |||| ||| |||||||||||||| |  | |||||||| |||||| |||||    
T  13762592 taaggctctgtttgataaaaatagcggatagcttataagctaactgatagtttatagcttttagctgatagcttatagctgatg 13762509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 24020691 - 24020632
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatg 194  Q
    |||| |||||||||||||||  |||||| | |||| |||||||||||||||||| |||||    
T  24020691 ggctctgtttggtaaaaatagtggatagcttataagctagctgatagtttatagctgatg 24020632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 41796067 - 41796138
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    |||||||| ||||||||||||||| | ||||| ||||||  |||||||||| || ||| |||| ||||||||    
T  41796067 ttaaggctctgtttggtaaaaatagcagatagctgataagttagctgatagcttttagctgatagctgatag 41796138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 4452855 - 4452901
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  4452855 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 4452901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 5040582 - 5040536
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctga 178  Q
    ||||||| ||||||||||||||| ||||||| |||||| ||||||||    
T  5040582 taaggctctgtttggtaaaaatagcggatagctgataagctagctga 5040536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 13527267 - 13527313
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  13527267 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 13527313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 36711838 - 36711884
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  36711838 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 36711884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 18710958 - 18710917
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||||||||| ||||||| |||||| |||||||||||    
T  18710958 tgtttggtaaaaatagcggatagctgataagctagctgatag 18710917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 9052362 - 9052430
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    ||||| ||| ||||||||||| |||||   |||||| ||||||||||  |||||| |||||||||||||    
T  9052362 aggctctgtatggtaaaaatagcggatgactgataagctagctgataacttatagctgatggctgatag 9052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 26912429 - 26912381
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatag 188  Q
    ||||||||||||||| ||||||  |||||| |||||||| |||||||||    
T  26912429 tgtttggtaaaaatagcggataactgataagctagctgaaagtttatag 26912381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 44158068 - 44157993
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatag 209  Q
    ||||| ||||||||||||||| ||||||| | |||| ||||||||||| |||||| |||| |||||||| ||||||    
T  44158068 aggctctgtttggtaaaaatagcggatagcttataagctagctgatagcttatagctgatagctgatagcttatag 44157993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 10619661 - 10619612
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  10619661 taaggctctgtttggtaaaaatagcggatagttgataagctagctgatag 10619612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 36591037 - 36590984
Alignment:
Q  164 tgataaactagctgatagtttatagttgatggctgatagtttatagttgatggc 217  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||| |||||||    
T  36591037 tgataagctagctgatagtttatagctgatggctgatagtatatagctgatggc 36590984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 17116333 - 17116265
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||||| ||| |||| ||| ||||    
T  17116333 aggctctgtttggtaaaaatagcggatagctgataagctagctgatagtttttagctgatagcttatag 17116265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 31687410 - 31687469
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||||| ||| ||||    
T  31687410 aggctctgtttggtaaaaatagcggatagctgataagctagctgatagtttttagctgat 31687469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 18411489 - 18411420
Alignment:
Q  138 tttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgat 214  Q
    ||||||||||||||||| |||||||||||||||       |||||  ||||||||||||||||||||||||| ||||    
T  18411489 tttgtttggtaaaaatagcggatagttgataaa-------atagtcgatagttgatggctgatagtttatagctgat 18411420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 31582544 - 31582494
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  31582544 ttaaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 31582494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 25024175 - 25024126
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  25024175 taaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 25024126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 32542008 - 32541962
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  32542008 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 32541962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 37586563 - 37586621
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||||||||||||||||||| || |||| |||||| |||| ||||||||| ||| ||||    
T  37586563 ggctttgtttggtaaaaatagcgaatagctgataagctagttgatagtttttagctgat 37586621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 1363143 - 1363188
Alignment:
Q  138 tttgtttggtaaaaataacggatagttgataaactagctgatagtt 183  Q
    ||||||||||||||||| |||||| |||||||  ||||||||||||    
T  1363143 tttgtttggtaaaaatagcggataattgataagttagctgatagtt 1363188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 28710105 - 28710064
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||||||||| ||||||||||||||  ||||||||||    
T  28710105 tgtttggtaaaaatagcggatagttgataagttagctgatag 28710064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 28717452 - 28717411
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||||||||| ||||||||||||||  ||||||||||    
T  28717452 tgtttggtaaaaatagcggatagttgataagttagctgatag 28717411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 30338345 - 30338304
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  30338345 tgtttggtaaaaataacggatagctgataagttagctgatag 30338304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 39872067 - 39872026
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||||||||| ||||||| |||||| |||||||||||    
T  39872067 tgtttggtaaaaatagcggatagctgataagctagctgatag 39872026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 44319039 - 44318979
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatg 194  Q
    ||||| || |||||||||||| ||||||| | ||||  ||||||||| |||||||||||||    
T  44319039 aggctctggttggtaaaaatagcggatagcttataagttagctgataatttatagttgatg 44318979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 33203001 - 33203051
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  33203001 ttaaggctctgtttggtaaaaatagcggatagctgataaactagctgatag 33203051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 47470378 - 47470429
Alignment:
Q  130 tttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  47470378 tttaaggctatgtttggtaaaaatagcggatagctgataagctagctgatag 47470429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 47585203 - 47585144
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctga 199  Q
    ||||||||||||| ||||||||| |||||| ||||||||||| |||||| ||||| ||||    
T  47585203 tgtttggtaaaaacaacggatagctgataagctagctgatagcttatagctgatgactga 47585144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 42375152 - 42375202
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  42375152 ttaaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 42375202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 36245741 - 36245790
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  36245741 taaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 36245790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 42586746 - 42586795
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  42586746 taaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 42586795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 22642384 - 22642444
Alignment:
Q  277 tatatgttatctgctataagctataagttagcttattggccttgccaaacagtccctaaat 337  Q
    |||| |||||| ||||||| ||||||||||| || |||||||||||||||||  |||||||    
T  22642384 tataagttatccgctataaactataagttagttttttggccttgccaaacagagcctaaat 22642444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 48730329 - 48730277
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttata 187  Q
    |||| ||||||| ||||||| |||||||||||||| ||||||||||| |||||    
T  48730329 ggctctgtttgggaaaaatagcggatagttgataagctagctgatagcttata 48730277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 790607 - 790662
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatag 188  Q
    |||||| ||||||||||||||| ||||||| |||||| |||||| |||| ||||||    
T  790607 aaggctctgtttggtaaaaatagcggatagctgataagctagcttatagcttatag 790662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 169
Target Start/End: Original strand, 34351304 - 34351335
Alignment:
Q  138 tttgtttggtaaaaataacggatagttgataa 169  Q
    ||||||||||||||||||||||||||||||||    
T  34351304 tttgtttggtaaaaataacggatagttgataa 34351335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 45673170 - 45673115
Alignment:
Q  138 tttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||| ||||| |||||    
T  45673170 tttgtttggtaaaaatagcggatatctgataagctagctgatagcttataattgat 45673115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 45686223 - 45686270
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  45686223 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 45686270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 40894220 - 40894146
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatag 209  Q
    |||| ||||||||||||||| ||||||  ||||||  ||| |||||| |||||| ||||| ||||||| ||||||    
T  40894220 ggctatgtttggtaaaaatagcggataactgataagttagttgatagcttatagctgatgactgatagcttatag 40894146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 43254978 - 43254932
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  43254978 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 43254932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 48831421 - 48831467
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  48831421 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 48831467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 22621592 - 22621629
Alignment:
Q  291 tataagctataagttagcttattggccttgccaaacag 328  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  22621592 tataagctataagttagcttcttggtcttgccaaacag 22621629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 34710020 - 34709979
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||||||||| ||||||| |||||| |||||||||||    
T  34710020 tgtttggtaaaaatagcggatagctgataagctagctgatag 34709979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 46878632 - 46878673
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||||||||||| ||||||| |||||| |||||||||||    
T  46878632 tgtttggtaaaaatagcggatagctgataagctagctgatag 46878673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 11465387 - 11465431
Alignment:
Q  146 gtaaaaataacggatagttgataaactagctgatagtttatagtt 190  Q
    ||||||||| ||||||||| |||| ||||||||||||| ||||||    
T  11465387 gtaaaaatagcggatagtttataagctagctgatagttgatagtt 11465431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 48943384 - 48943331
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||    
T  48943384 tgtttggtaaaaatagcggatagctgataaactagctgatagtttttagctgat 48943331  T

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Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 38186579 - 38186519
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||||| ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  38186579 aaggctctgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 38186519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 45369707 - 45369647
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgat 200  Q
    ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||||| ||||||    
T  45369707 tgtttggtaaaaatagcggatagctgataagttagctgatagcttatagttgatagctgat 45369647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 2852712 - 2852637
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatag 209  Q
    ||||| ||||||||||||||| ||||||| |||||| ||| || |||| |||||| ||||| ||||||| ||||||    
T  2852712 aggctctgtttggtaaaaatagcggatagctgataagctaacttatagcttatagctgatgactgatagcttatag 2852637  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 24627462 - 24627529
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttat 207  Q
    ||||||||||||||| |||||||||||||| |||||| |||| | |||| ||||| ||||||| ||||    
T  24627462 tgtttggtaaaaatagcggatagttgataagctagcttatagctgatagatgatgactgatagcttat 24627529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 29080618 - 29080677
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  29080618 aggctctgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 29080677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 25571195 - 25571149
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||||    
T  25571195 ggctatgtttggtaaaaataacggatagctgataagctagctgatag 25571149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 40562673 - 40562723
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  40562673 ttaaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 40562723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 52226172 - 52226098
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgat 214  Q
    ||||||||||||||| |||||   |||||| |||||||||||||||||| |||||| |||||  |||||| ||||    
T  52226172 tgtttggtaaaaatagcggatgactgataagctagctgatagtttatagctgatggttgataacttatagctgat 52226098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 21707900 - 21707847
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  21707900 tgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 21707847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 29717563 - 29717612
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  29717563 taaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 29717612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 35500442 - 35500389
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  35500442 tgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 35500389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 41519363 - 41519302
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||| ||||||||||||| ||||||||| |||||| |||||| |||| |||||| ||||    
T  41519363 taaggctctgtttggtaaaaaaaacggatagctgataagctagcttatagcttatagctgat 41519302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 55227123 - 55227172
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  55227123 taaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 55227172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 2579339 - 2579387
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  2579339 aaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 2579387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 44946523 - 44946579
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagtt 190  Q
    ||||| ||||||||||||||||||||||| | ||||  |||||||||| ||||||||    
T  44946523 aggctctgtttggtaaaaataacggatagcttataagttagctgatagcttatagtt 44946579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 46972850 - 46972782
Alignment:
Q  133 aaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgata 201  Q
    |||||| ||||||||||||||| ||||||| | |||| ||||||||||| || ||| |||| |||||||    
T  46972850 aaggctctgtttggtaaaaatagcggatagcttataagctagctgatagcttttagctgatagctgata 46972782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 37528084 - 37528131
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  37528084 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 37528131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 43526540 - 43526493
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||||||||||  ||||||||||    
T  43526540 aggctctgtttggtaaaaatagcggatagttgataagttagctgatag 43526493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 4241094 - 4241052
Alignment:
Q  139 ttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||| ||||||||||||||||| |||||| |||||||||||    
T  4241094 ttgtttagtaaaaataacggatagctgataagctagctgatag 4241052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 40479397 - 40479451
Alignment:
Q  126 tttgtttaaggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    ||||||| ||||| ||||||||||||||| ||||||| |||||| ||| ||||||    
T  40479397 tttgttttaggctctgtttggtaaaaatagcggatagctgataagctaactgata 40479451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 44846406 - 44846364
Alignment:
Q  139 ttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||||||||||| ||||||| |||||| |||||||||||    
T  44846406 ttgtttggtaaaaatagcggatagctgataagctagctgatag 44846364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 1265226 - 1265259
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaacta 173  Q
    |||||||||||||||||| |||||||||||||||    
T  1265226 tgtttggtaaaaataacgaatagttgataaacta 1265259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 19947655 - 19947704
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||  |||||| |||||||||||    
T  19947655 taaggctctgtttggtaaaaatagcggataactgataagctagctgatag 19947704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 37089078 - 37089029
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| ||| |||||||    
T  37089078 taaggctctgtttggtaaaaatagcggatagctgataagctaactgatag 37089029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 46318045 - 46318090
Alignment:
Q  172 tagctgatagtttatagttgatggctgatagtttatagttgatggc 217  Q
    ||||| |||| |||||| ||||| ||||||||||||||||||||||    
T  46318045 tagcttatagcttatagctgatgactgatagtttatagttgatggc 46318090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 32025583 - 32025631
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatag 188  Q
    ||||||||||||||| ||||||| | |||| ||||||||||| ||||||    
T  32025583 tgtttggtaaaaatagcggatagcttataagctagctgatagcttatag 32025631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 32981845 - 32981929
Alignment:
Q  131 ttaaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgatg 215  Q
    |||||| | |||||||||||||||  ||||   ||||||  |||||||||| |||||| | ||||||||||| |||||| |||||    
T  32981845 ttaaggttctgtttggtaaaaatagtggatgactgataagttagctgatagcttatagcttatggctgatagcttatagctgatg 32981929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 45344378 - 45344426
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgata 180  Q
    ||||||| ||||||||||||||| ||||||| ||||||  |||||||||    
T  45344378 taaggctctgtttggtaaaaatagcggatagctgataagttagctgata 45344426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 52165408 - 52165460
Alignment:
Q  129 gtttaaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||||||||| ||||||||||||||| ||||||| | |||| ||| |||||||    
T  52165408 gtttaaggctctgtttggtaaaaatagcggatagcttataagctaactgatag 52165460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 52867516 - 52867564
Alignment:
Q  140 tgtttggtaaaaataacggatagttgataaactagctgatagtttatag 188  Q
    ||||||||||||||| ||||||| | |||| ||||||||||| ||||||    
T  52867516 tgtttggtaaaaatagcggatagcttataagctagctgatagcttatag 52867564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 54541381 - 54541421
Alignment:
Q  128 tgtttaaggctttgtttggtaaaaataacggatagttgata 168  Q
    ||||| ||||| ||||||||||||||||||||||| |||||    
T  54541381 tgttttaggctctgtttggtaaaaataacggatagctgata 54541421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 192880 - 192804
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagtt 211  Q
    |||||||||| |||||||||  |||||| | |||| ||||||||||| |||||| | || |||||||||||||||||    
T  192880 ggctttgttttgtaaaaatagtggatagcttataagctagctgatagcttatagcttatagctgatagtttatagtt 192804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 129503 - 129561
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    |||| ||||||||||||||| ||||||| |||||| ||||||||||| |||||| ||||    
T  129503 ggctctgtttggtaaaaatagcggatagctgataagctagctgatagcttatagctgat 129561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 5262 - 5181
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatagttgatg 215  Q
    ||||| ||||||||||||||| ||| ||| |||||| ||||||||||| |||||| ||| | ||||||| | |||| |||||    
T  5262 aggctctgtttggtaaaaatagcggttagctgataagctagctgatagcttatagctgacgactgatagctgatagctgatg 5181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 28361 - 28410
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  28361 taaggctctgtttggtaaaaatagcggatagctgataagctagctgatag 28410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 92842 - 92910
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatag 202  Q
    ||||| ||||||||||||||| ||||||| ||||||  ||||||||||||| ||| |||| ||| ||||    
T  92842 aggctctgtttggtaaaaatagcggatagctgataagttagctgatagtttttagctgatagcttatag 92910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 9363 - 9410
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  9363 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 9410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 25711 - 25664
Alignment:
Q  134 aggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  25711 aggctctgtttggtaaaaatagcggatagctgataagctagctgatag 25664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 7843 - 7797
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  7843 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 7797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 22220 - 22266
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||||||||||| |||||| |||||| ||||    
T  22220 ggctctgtttggtaaaaataacggatagctgataagctagcttatag 22266  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 11783 - 11829
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  11783 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 11829  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 72064 - 72138
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgatggctgatagtttatag 209  Q
    |||| ||||||||||||||| ||||||  ||||||  ||| |||||| |||||| ||||| ||||||| ||||||    
T  72064 ggctatgtttggtaaaaatagcggataactgataagttagttgatagcttatagctgatgactgatagcttatag 72138  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 41063 - 41109
Alignment:
Q  135 ggctttgtttggtaaaaataacggatagttgataaactagctgatag 181  Q
    |||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  41063 ggctctgtttggtaaaaatagcggatagctgataagctagctgatag 41109  T

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Target: scaffold0362 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 6218 - 6157
Alignment:
Q  132 taaggctttgtttggtaaaaataacggatagttgataaactagctgatagtttatagttgat 193  Q
    ||||||| ||||||||||||||| ||||||| ||||||  ||| ||||||||| ||| ||||    
T  6218 taaggctctgtttggtaaaaatagcggatagctgataagttagttgatagtttttagctgat 6157  T

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