View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11894_high_25 (Length: 346)

Name: NF11894_high_25
Description: NF11894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11894_high_25
NF11894_high_25
[»] chr2 (3 HSPs)
chr2 (1-214)||(4986871-4987093)
chr2 (216-284)||(45420990-45421058)
chr2 (302-331)||(4986836-4986865)
[»] chr6 (2 HSPs)
chr6 (216-289)||(33629568-33629641)
chr6 (216-289)||(1682510-1682583)
[»] chr5 (1 HSPs)
chr5 (224-290)||(10487512-10487578)
[»] chr4 (5 HSPs)
chr4 (216-290)||(3130576-3130650)
chr4 (216-290)||(47540394-47540468)
chr4 (207-290)||(5817769-5817853)
chr4 (223-290)||(8655678-8655745)
chr4 (216-290)||(7663838-7663912)
[»] chr3 (4 HSPs)
chr3 (216-290)||(13447948-13448022)
chr3 (216-290)||(32004449-32004523)
chr3 (213-287)||(38542811-38542885)
chr3 (216-290)||(30167945-30168019)
[»] chr1 (9 HSPs)
chr1 (216-290)||(4644481-4644555)
chr1 (223-290)||(21527629-21527696)
chr1 (203-290)||(9528337-9528425)
chr1 (218-290)||(52336131-52336203)
chr1 (227-290)||(14366233-14366296)
chr1 (220-290)||(47115756-47115826)
chr1 (223-289)||(48266323-48266389)
chr1 (216-290)||(36305252-36305325)
chr1 (216-290)||(36928635-36928708)
[»] scaffold0220 (1 HSPs)
scaffold0220 (223-290)||(22818-22885)
[»] chr8 (2 HSPs)
chr8 (216-290)||(19385307-19385381)
chr8 (216-290)||(7451820-7451893)
[»] scaffold0029 (1 HSPs)
scaffold0029 (223-290)||(135241-135308)
[»] scaffold0002 (3 HSPs)
scaffold0002 (223-290)||(313068-313135)
scaffold0002 (223-290)||(328522-328589)
scaffold0002 (261-290)||(321785-321814)
[»] chr7 (5 HSPs)
chr7 (216-287)||(15654305-15654376)
chr7 (243-290)||(9534140-9534187)
chr7 (220-290)||(19402686-19402756)
chr7 (216-290)||(21277650-21277723)
chr7 (217-290)||(46623170-46623243)
[»] scaffold0418 (1 HSPs)
scaffold0418 (216-290)||(7141-7215)


Alignment Details
Target: chr2 (Bit Score: 134; Significance: 1e-69; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4987093 - 4986871
Alignment:
Q  1 gacatcataaatcttgatgttaccatcatg---------gcatatagtttgttgaactttagttataacttgtagattatgagtttaattgacttccgtg 91  Q
    ||||||||||||||||||||||| ||||||         |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4987093 gacatcataaatcttgatgttacaatcatgatattgatcgcatatagtttgttgaactttagttataccttgtagattatgagtttaattgacttccgtg 4986994  T
Q  92 tcaatttagatgatctaatttaattttnnnnnnngaaagaaccggttattacttttcgcacacgttttttcttccactacacctgattcctctatacgat 191  Q
    ||||||||||||||||||||||| |||       ||||| || |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  4986993 tcaatttagatgatctaatttaactttaaaagaagaaaggactggttattactttccgcacacgttttttctttcactacatctgattcctctatacgat 4986894  T
Q  192 taatttttggaggtgtaattttt 214  Q
    ||| |||||||||||||||||||    
T  4986893 taacttttggaggtgtaattttt 4986871  T

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Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 284
Target Start/End: Complemental strand, 45421058 - 45420990
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttgg 284  Q
    |||||||| |||||||||| | |||| ||||||||||||||||| | |||||||||||| |||||||||    
T  45421058 gttcctgtagtagtctctaaggcacaccttgtgctttagggactgctttgttatataatctcattttgg 45420990  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 331
Target Start/End: Complemental strand, 4986865 - 4986836
Alignment:
Q  302 ctttaatgtagtttgaactttcaaaaaagt 331  Q
    ||||||||||||||||||||||||||||||    
T  4986865 ctttaatgtagtttgaactttcaaaaaagt 4986836  T

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Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 33629641 - 33629568
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggctttt 289  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33629641 gttcttgttgtagtctctatggcacaccttgtgctttagggactacattgttatataatttcattttggctttt 33629568  T

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Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 1682583 - 1682510
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggctttt 289  Q
    |||| ||| |||||||||||| |||| ||||||||||||| ||| |||||| |||||||||||||||| |||||    
T  1682583 gttcttgtagtagtctctatggcacaccttgtgctttaggcactgcattgtcatataatttcattttgactttt 1682510  T

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Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 290
Target Start/End: Original strand, 10487512 - 10487578
Alignment:
Q  224 tgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    ||||||||||||| |||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10487512 tgtagtctctatggcacaccttgtgctctagggactgcattgttatataatttcattttggcttttt 10487578  T

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Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 3130576 - 3130650
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    ||||||||||||||||||| | |||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  3130576 gttcctgttgtagtctctacggcacaccttgtactttaggaactgcattgttatataatttcattttggcttttt 3130650  T

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Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 47540468 - 47540394
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||||||||| |||||  ||||  |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  47540468 gttcctgttgtagtatctatagcacactttgtgcgttagggactgcattgttatataatttcattttggcttttt 47540394  T

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Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 5817769 - 5817853
Alignment:
Q  207 taattttttgttcctgtt-gtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    ||||| || ||||||||| |||||||||||| |||| | |||||| |||||||| |||||||||||||||| |||||||||||||    
T  5817769 taattcttggttcctgtttgtagtctctatggcacaccctgtgctctagggactgcattgttatataattttattttggcttttt 5817853  T

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Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 8655678 - 8655745
Alignment:
Q  223 ttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||||||||| |||| |||||||| || || || ||||||||||||||||||||||||||||||    
T  8655678 ttgtagtctctatggcacaccttgtgctctacgggctgcattgttatataatttcattttggcttttt 8655745  T

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Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 7663838 - 7663912
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||| |||||||||| | |||| ||| ||||||||||| | | |||||||||||| |||||||||||||||    
T  7663838 gttcctgtagtagtctctaaggcacaccttatgctttagggattgctttgttatataatctcattttggcttttt 7663912  T

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Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 13448022 - 13447948
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  13448022 gttcctgctgtagtctctatggcacaccttgtgctttagggactgcattggtatataatttcattttggcgtttt 13447948  T

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Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 32004523 - 32004449
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    ||||||||||||||||||||| ||||  ||||||| |||||||| |||||||||||||||| |||||||||||||    
T  32004523 gttcctgttgtagtctctatggcacacgttgtgctctagggactgcattgttatataattttattttggcttttt 32004449  T

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Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 38542811 - 38542885
Alignment:
Q  213 tttgttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggctt 287  Q
    ||||||||||| |||||||||| | |||| |||||||| |||||||| | ||||||||||||| |||||||||||    
T  38542811 tttgttcctgtagtagtctctaaggcacaccttgtgctctagggactgctttgttatataattccattttggctt 38542885  T

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Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 30167945 - 30168019
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||| ||| ||||| |||| | |||| ||||||||||||||||| | |||||||||||| |||||||||||||||    
T  30167945 gttcgtgtagtagtttctaaggcacaccttgtgctttagggactgctttgttatataatctcattttggcttttt 30168019  T

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Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 4644555 - 4644481
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||| |||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  4644555 gttcttgttgtagtctctatggcacaccttgtgctctagggactgcattgttatataatttcgttttggcttttt 4644481  T

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Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 21527696 - 21527629
Alignment:
Q  223 ttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||||||||| |||| |||||||| |||||||| || |||||||||||||||||||||||||||    
T  21527696 ttgtagtctctatggcacaccttgtgctctagggactgcactgttatataatttcattttggcttttt 21527629  T

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Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 290
Target Start/End: Original strand, 9528337 - 9528425
Alignment:
Q  203 ggtgtaattttttgttcctgtt-gtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    ||||||| | || ||||||||| |||||||||||| |||| ||| |||| |||||||| |||||||||||||||||||||| |||||||    
T  9528337 ggtgtaactcttggttcctgtttgtagtctctatggcacaccttatgctctagggactgcattgttatataatttcattttagcttttt 9528425  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 52336203 - 52336131
Alignment:
Q  218 tcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||||| |||||||| ||||  ||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  52336203 tcctgttgtaatctctatggcacacattgtgctctagagactgcattgttatataatttcattttggcttttt 52336131  T

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Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 14366233 - 14366296
Alignment:
Q  227 agtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||||| |||| |||||||| |||||| | |||||||||||||||| |||||||||||||    
T  14366233 agtctctatggcacaccttgtgctctagggattgcattgttatataattttattttggcttttt 14366296  T

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Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 47115826 - 47115756
Alignment:
Q  220 ctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    ||||||||||||||| |||||| |||||||| || | ||| |||| ||||||||||||||||| |||||||    
T  47115826 ctgttgtagtctctaagacacaccttgtgctctaagaacttcattattatataatttcattttagcttttt 47115756  T

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Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 48266323 - 48266389
Alignment:
Q  223 ttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggctttt 289  Q
    |||||||||||||| ||||  ||||||| |||| | | |||||||||||||||||||||||||||||    
T  48266323 ttgtagtctctatggcacacattgtgctctaggaattgcattgttatataatttcattttggctttt 48266389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 36305325 - 36305252
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||| |||||||||| | |||| |||||||| ||||||||   |||||||||| |||||||||||||||||    
T  36305325 gttcctgtggtagtctctaaggcacaccttgtgctctagggactgttttgttatata-tttcattttggcttttt 36305252  T

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Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 36928708 - 36928635
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||| | |||||||||| | |||| |||||||| |||||||| | |||||||||| |||||||||||||||||    
T  36928708 gttcctatggtagtctctaaggcacaccttgtgctctagggactgctttgttatata-tttcattttggcttttt 36928635  T

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Target: scaffold0220 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 22818 - 22885
Alignment:
Q  223 ttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    ||||||||| ||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||    
T  22818 ttgtagtctgtatgacacaccttgtgctctagggactgtattgttatataatttcattttggcttttt 22885  T

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Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 19385307 - 19385381
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||| |||||||||||||| |||| ||| |||||||||||||  |||||||||||||||||||| ||||||||    
T  19385307 gttcctattgtagtctctatggcacaccttatgctttagggactgtattgttatataatttcatttcggcttttt 19385381  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 7451893 - 7451820
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||| | |||||||||| | |||| |||||||| |||||||| | |||||||||| |||||||||||||||||    
T  7451893 gttcctatggtagtctctaaggcacagcttgtgctctagggactgctttgttatata-tttcattttggcttttt 7451820  T

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Target: scaffold0029 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 135241 - 135308
Alignment:
Q  223 ttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||||||||| |||  |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  135241 ttgtagtctctatggcacgccttgtgctctaggggctgcattgttatataatttcattttggcttttt 135308  T

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Target: scaffold0002 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 313068 - 313135
Alignment:
Q  223 ttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||||||||| |||  |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  313068 ttgtagtctctatggcacgccttgtgctctaggggctgcattgttatataatttcattttggcttttt 313135  T

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Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 328522 - 328589
Alignment:
Q  223 ttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||||||||| |||  |||||||| ||||| || ||||||||||||||||||||||||||||||    
T  328522 ttgtagtctctatggcacgccttgtgctctaggggctgcattgttatataatttcattttggcttttt 328589  T

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Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 321785 - 321814
Alignment:
Q  261 cattgttatataatttcattttggcttttt 290  Q
    ||||||||||||||||||||||||||||||    
T  321785 cattgttatataatttcattttggcttttt 321814  T

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Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 15654305 - 15654376
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggctt 287  Q
    |||||||| |||||||||| |||||| |||||||| |||||||| | |||||||||||| ||||||||||||    
T  15654305 gttcctgtagtagtctctaagacacaccttgtgctctagggactgctttgttatataatctcattttggctt 15654376  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 9534187 - 9534140
Alignment:
Q  243 cttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  9534187 cttgtgctctagggactatattgttatataatttcattttggcttttt 9534140  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 19402756 - 19402686
Alignment:
Q  220 ctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||| |||||||||| | |||| |||||||| |||||||| | |||||||||||| |||||||||||||||    
T  19402756 ctgtagtagtctctaaggcacaccttgtgctctagggactgctttgttatataatctcattttggcttttt 19402686  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 290
Target Start/End: Original strand, 21277650 - 21277723
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||| ||||| |||| | |||| |||||||| |||||||| | |||||||||| |||||||||||||||||    
T  21277650 gttcctgtggtagtgtctaaggcacaccttgtgctctagggactgctttgttatata-tttcattttggcttttt 21277723  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 46623243 - 46623170
Alignment:
Q  217 ttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    ||||||| |||||||||| ||||||  || |||| |||||||| | |||||||||||| |||||||| ||||||    
T  46623243 ttcctgtagtagtctctaagacacactttatgctgtagggactgctttgttatataatctcattttgacttttt 46623170  T

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Target: scaffold0418 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 7215 - 7141
Alignment:
Q  216 gttcctgttgtagtctctatgacacatcttgtgctttagggactacattgttatataatttcattttggcttttt 290  Q
    |||||||| |||||||||| | |||| ||| ||||||||||| | | |||||||||||| |||||||||||||||    
T  7215 gttcctgtagtagtctctaaggcacaccttatgctttagggattgctttgttatataatctcattttggcttttt 7141  T

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