View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11894_high_37 (Length: 239)
Name: NF11894_high_37
Description: NF11894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11894_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 78 - 223
Target Start/End: Original strand, 32649786 - 32649931
Alignment:
| Q |
78 |
cttcttgtgctaaaactccttcttaagctaaagtctgttaacctttaagactgttacaaattaaactcgaaaataagatatcaaaacaaaccaactaata |
177 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32649786 |
cttcttgtgctaaaactccttcttaagctaaagtctgttaacctttaagactgttacaaattaaactcgaaaataagatatcaaaacaaaccaactaata |
32649885 |
T |
|
| Q |
178 |
ctataaccaacggagagggacaaccaaaaagagcaactatcaaagt |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32649886 |
ctataaccaacggagagggacaaccaaaaagagcaactatcaaagt |
32649931 |
T |
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