View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11896_high_11 (Length: 380)
Name: NF11896_high_11
Description: NF11896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11896_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 17 - 374
Target Start/End: Complemental strand, 26936150 - 26935793
Alignment:
| Q |
17 |
aggttgaatactttgagatggaatttgtgcaattttcttgtattttgtatcaaacaataacaacccttttgaactcagcttaatatatgtaatgcttcta |
116 |
Q |
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| T |
26936150 |
aggttgaatactttgagatggaatttgtgcaattttcttgtattttgtatcaaacaataacaacccttttgaactcagcttaatatatgtaatgcttcta |
26936051 |
T |
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| Q |
117 |
ttcattgaaggctgaaagttccaataagaataccttaactcaccagagtttacatacaaagcaaccttgttattctcgatttcgaatgagtagaacatgc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26936050 |
ttcattgaaggctgaaagttccaataagaataccttaactcaccagagtttacatacaaagcaaccttgttattctcgatttcgaatgagtagaacatgc |
26935951 |
T |
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| Q |
217 |
ttgagttggttcgcgacgatgttaatcgagtcgctacatcaagttgctggccccatagcattacatcagttggaaaattgaaactttgccatttgatatt |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26935950 |
ttgagttggttcgcgacgatgttaatcgagtcgctacatcaagttgctggccccatagcattacatcagttggaaaattgaaactttgccatttgatatt |
26935851 |
T |
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| Q |
317 |
gttgaattcatccacaagcacaagatttcctgtgttcagtatttgcaatctctgcttc |
374 |
Q |
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| T |
26935850 |
gttgaattcatccacaagcacaagatttcctgtgttcagtatttgcaatctctgcttc |
26935793 |
T |
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