View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11896_high_13 (Length: 326)

Name: NF11896_high_13
Description: NF11896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11896_high_13
NF11896_high_13
[»] chr5 (24 HSPs)
chr5 (1-282)||(22082003-22082284)
chr5 (1-286)||(26037344-26037629)
chr5 (1-256)||(30605029-30605285)
chr5 (1-286)||(38405927-38406212)
chr5 (8-279)||(23419871-23420143)
chr5 (1-286)||(26328524-26328808)
chr5 (1-286)||(23757564-23757850)
chr5 (1-286)||(23823020-23823306)
chr5 (1-274)||(18221675-18221949)
chr5 (1-286)||(22251348-22251634)
chr5 (1-275)||(24190429-24190704)
chr5 (8-242)||(9421868-9422102)
chr5 (9-286)||(22404068-22404347)
chr5 (1-229)||(22245724-22245952)
chr5 (102-277)||(20714060-20714234)
chr5 (179-277)||(13941332-13941430)
chr5 (201-286)||(23624607-23624692)
chr5 (1-77)||(25104977-25105053)
chr5 (1-77)||(25164070-25164146)
chr5 (201-251)||(22183661-22183711)
chr5 (201-249)||(20127705-20127753)
chr5 (204-246)||(17660812-17660854)
chr5 (9-76)||(23624449-23624512)
chr5 (203-251)||(24118309-24118357)
[»] chr7 (32 HSPs)
chr7 (1-278)||(29545456-29545734)
chr7 (1-260)||(20992109-20992368)
chr7 (1-275)||(12326377-12326653)
chr7 (1-279)||(14927214-14927489)
chr7 (1-279)||(15350680-15350955)
chr7 (1-274)||(16207200-16207474)
chr7 (4-286)||(4459308-4459591)
chr7 (50-286)||(15506845-15507082)
chr7 (1-286)||(15438643-15438928)
chr7 (1-286)||(11520718-11521005)
chr7 (1-173)||(16437341-16437513)
chr7 (52-274)||(16221892-16222115)
chr7 (8-160)||(10280427-10280579)
chr7 (1-245)||(645702-645942)
chr7 (98-274)||(10661526-10661701)
chr7 (199-277)||(26132272-26132350)
chr7 (98-278)||(20924423-20924603)
chr7 (174-286)||(23082084-23082196)
chr7 (200-277)||(21261195-21261272)
chr7 (179-270)||(23960769-23960860)
chr7 (6-249)||(14165736-14165974)
chr7 (179-272)||(42636950-42637043)
chr7 (179-277)||(10038047-10038145)
chr7 (1-75)||(11589031-11589105)
chr7 (9-77)||(11999455-11999523)
chr7 (203-251)||(19295519-19295567)
chr7 (200-277)||(10280609-10280686)
chr7 (208-246)||(14688085-14688123)
chr7 (201-242)||(19353881-19353922)
chr7 (200-277)||(24902871-24902947)
chr7 (210-251)||(26193683-26193724)
chr7 (202-274)||(7585870-7585942)
[»] chr6 (46 HSPs)
chr6 (1-278)||(12039025-12039301)
chr6 (1-286)||(17863781-17864067)
chr6 (1-282)||(20653635-20653917)
chr6 (1-249)||(25805974-25806222)
chr6 (1-279)||(23882013-23882291)
chr6 (1-275)||(19077709-19077984)
chr6 (1-286)||(29252986-29253275)
chr6 (1-286)||(17235160-17235446)
chr6 (1-186)||(20465302-20465487)
chr6 (1-279)||(15930163-15930441)
chr6 (1-286)||(33666358-33666643)
chr6 (1-286)||(8464974-8465264)
chr6 (8-286)||(13869709-13869988)
chr6 (9-286)||(13195898-13196176)
chr6 (1-286)||(17855761-17856047)
chr6 (3-275)||(20989108-20989381)
chr6 (1-286)||(23879451-23879737)
chr6 (6-286)||(21705837-21706118)
chr6 (84-286)||(25970326-25970529)
chr6 (84-286)||(25974766-25974969)
chr6 (1-286)||(9281017-9281303)
chr6 (1-206)||(19100463-19100668)
chr6 (8-286)||(21722715-21722993)
chr6 (8-258)||(19171988-19172237)
chr6 (1-260)||(19894002-19894263)
chr6 (1-176)||(12028561-12028736)
chr6 (8-248)||(17527230-17527470)
chr6 (191-279)||(12385173-12385261)
chr6 (1-112)||(17876236-17876347)
chr6 (138-286)||(19168149-19168298)
chr6 (180-267)||(19598426-19598513)
chr6 (132-251)||(24542351-24542470)
chr6 (200-245)||(34639555-34639600)
chr6 (179-286)||(11992328-11992436)
chr6 (203-251)||(28624579-28624627)
chr6 (229-286)||(19100669-19100727)
chr6 (5-39)||(28623134-28623168)
chr6 (13-77)||(25969918-25969982)
chr6 (13-77)||(25974358-25974422)
chr6 (179-244)||(17868275-17868340)
chr6 (179-244)||(17878058-17878123)
chr6 (201-246)||(18152107-18152152)
chr6 (200-277)||(19658684-19658761)
chr6 (203-244)||(30425650-30425691)
chr6 (210-246)||(11961244-11961280)
chr6 (221-276)||(20465230-20465286)
[»] chr8 (12 HSPs)
chr8 (1-286)||(33977625-33977911)
chr8 (1-286)||(27924760-27925046)
chr8 (1-250)||(26536853-26537102)
chr8 (35-286)||(33962333-33962585)
chr8 (1-286)||(23540714-23541000)
chr8 (1-286)||(45136677-45136962)
chr8 (1-243)||(22485699-22485941)
chr8 (3-277)||(18622242-18622503)
chr8 (98-271)||(9997161-9997332)
chr8 (133-188)||(22476835-22476890)
chr8 (200-277)||(20254194-20254271)
chr8 (1-43)||(22476746-22476788)
[»] chr1 (19 HSPs)
chr1 (1-286)||(24986549-24986835)
chr1 (1-286)||(11667210-11667496)
chr1 (1-286)||(20840571-20840857)
chr1 (8-286)||(20200396-20200673)
chr1 (1-277)||(23477253-23477528)
chr1 (1-286)||(13165960-13166246)
chr1 (64-279)||(17850742-17850957)
chr1 (1-248)||(26971744-26971989)
chr1 (1-286)||(4246602-4246892)
chr1 (112-251)||(22891144-22891283)
chr1 (1-190)||(15803541-15803730)
chr1 (98-246)||(12753723-12753871)
chr1 (200-277)||(10339476-10339553)
chr1 (146-249)||(9452117-9452220)
chr1 (97-279)||(1626235-1626417)
chr1 (198-279)||(25349544-25349625)
chr1 (194-286)||(13150051-13150144)
chr1 (201-245)||(22347972-22348016)
chr1 (201-252)||(51471433-51471484)
[»] scaffold0213 (1 HSPs)
scaffold0213 (1-286)||(7886-8173)
[»] chr3 (30 HSPs)
chr3 (1-231)||(296007-296237)
chr3 (1-260)||(18063541-18063800)
chr3 (1-286)||(13514925-13515212)
chr3 (1-286)||(28051704-28051990)
chr3 (1-248)||(13791243-13791490)
chr3 (9-286)||(18482680-18482958)
chr3 (1-286)||(7028378-7028664)
chr3 (1-286)||(17135452-17135738)
chr3 (5-244)||(21253347-21253586)
chr3 (9-286)||(24196099-24196377)
chr3 (135-286)||(20626950-20627102)
chr3 (1-229)||(23953923-23954151)
chr3 (9-260)||(15572337-15572588)
chr3 (1-204)||(18548214-18548416)
chr3 (1-248)||(1918590-1918837)
chr3 (1-248)||(19634446-19634692)
chr3 (179-277)||(286217-286315)
chr3 (7-251)||(17042103-17042341)
chr3 (179-272)||(6578871-6578964)
chr3 (180-286)||(21547528-21547635)
chr3 (200-277)||(979698-979775)
chr3 (201-252)||(31650450-31650501)
chr3 (203-251)||(214438-214486)
chr3 (201-245)||(8225849-8225893)
chr3 (201-245)||(18477860-18477904)
chr3 (9-77)||(44453056-44453124)
chr3 (200-251)||(3551822-3551873)
chr3 (201-251)||(15674181-15674231)
chr3 (200-251)||(25020161-25020212)
chr3 (208-245)||(11657072-11657109)
[»] scaffold0226 (3 HSPs)
scaffold0226 (1-286)||(6846-7131)
scaffold0226 (1-286)||(17432-17718)
scaffold0226 (1-286)||(26826-27112)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-279)||(16640-16919)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-258)||(15957-16214)
[»] chr4 (29 HSPs)
chr4 (1-212)||(15161866-15162077)
chr4 (1-286)||(18600967-18601253)
chr4 (1-279)||(19182997-19183277)
chr4 (1-286)||(33898316-33898602)
chr4 (1-279)||(16384456-16384735)
chr4 (1-279)||(15699651-15699929)
chr4 (1-286)||(23399503-23399789)
chr4 (1-286)||(25117422-25117708)
chr4 (9-286)||(28019877-28020155)
chr4 (180-274)||(9069689-9069783)
chr4 (105-251)||(33746588-33746736)
chr4 (176-286)||(10724939-10725049)
chr4 (176-286)||(10938708-10938818)
chr4 (1-120)||(10724828-10724939)
chr4 (1-120)||(10938597-10938708)
chr4 (210-273)||(15623211-15623274)
chr4 (179-277)||(19660160-19660257)
chr4 (201-245)||(10683013-10683057)
chr4 (201-245)||(10896653-10896697)
chr4 (233-286)||(15161810-15161864)
chr4 (201-246)||(10197596-10197641)
chr4 (208-245)||(10723060-10723097)
chr4 (208-245)||(10936829-10936866)
chr4 (201-245)||(10718241-10718285)
chr4 (201-245)||(10932010-10932054)
chr4 (132-251)||(33744168-33744287)
chr4 (200-277)||(32862409-32862486)
chr4 (208-248)||(41786206-41786246)
chr4 (201-245)||(49975014-49975058)
[»] chr2 (13 HSPs)
chr2 (1-277)||(21530944-21531220)
chr2 (1-260)||(24789493-24789752)
chr2 (1-286)||(15328891-15329171)
chr2 (1-228)||(22611457-22611684)
chr2 (8-260)||(23759197-23759449)
chr2 (1-286)||(12911058-12911344)
chr2 (180-277)||(21249515-21249612)
chr2 (201-246)||(27111798-27111843)
chr2 (201-245)||(36397839-36397883)
chr2 (201-246)||(27108209-27108254)
chr2 (201-251)||(24311196-24311246)
chr2 (201-251)||(24312988-24313038)
chr2 (201-238)||(26859346-26859383)
[»] scaffold0185 (1 HSPs)
scaffold0185 (8-279)||(1682-1954)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-286)||(24985-25271)
[»] scaffold0359 (1 HSPs)
scaffold0359 (7-227)||(2462-2682)
[»] scaffold0069 (1 HSPs)
scaffold0069 (49-260)||(9288-9499)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-173)||(26971-27143)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-279)||(37156-37435)
[»] scaffold0129 (1 HSPs)
scaffold0129 (47-248)||(16117-16318)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-248)||(47737-47985)
[»] scaffold0453 (1 HSPs)
scaffold0453 (49-286)||(1308-1546)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-286)||(109566-109852)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-248)||(159637-159884)
[»] scaffold1001 (1 HSPs)
scaffold1001 (98-278)||(626-805)
[»] scaffold0006 (1 HSPs)
scaffold0006 (114-286)||(88425-88596)
[»] scaffold0035 (1 HSPs)
scaffold0035 (214-279)||(38084-38149)
[»] scaffold0064 (2 HSPs)
scaffold0064 (201-251)||(45311-45361)
scaffold0064 (208-251)||(52285-52328)
[»] scaffold0480 (1 HSPs)
scaffold0480 (1-34)||(11747-11780)


Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 22082284 - 22082003
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22082284 aaatatggaaagtcttaaaatgtcagaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaacactactttaggaatattccaca 22082185  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22082184 actgattatgtaaatatatgtgcgttccttggtcaataagatagggaaatattgtttccttaaacaataaagggcgcacgtacaaacatgcatgaactca 22082085  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattgatt 282  Q
     ||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  22082084 agcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctgaaatatgttggaacattgatt 22082003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 26037344 - 26037629
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  26037344 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatactactttaggaatattccaca 26037443  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |||||||||||| ||||| ||| ||||||| |||||| |||||||||||||||||||||||||||| || ||  |||| | ||||||||  |    
T  26037444 actgattttgtaaagatatgcgcgttgcttggtcaataggataaggaaatattgtttccttaaacaataaagggtgcgcg-ccaaatatgcatgaaccga 26037542  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||| ||||| ||||||||||| |||||||| |||||||||| |||||||| || |||||||| ||||||| ||||||    
T  26037543 ggcacactgaaccatgccaggatgttggaacatcgtatccgacatcttacagagatgcctaaacacatgttgaaacattggttccaa 26037629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 30605285 - 30605029
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtct-aaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccac 99  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||| | ||||||||||||||||    
T  30605285 aaatatggaaagtcctataatgtcggaacatctttaggatcgtcacaaaacaacttcaaatatttcctaaaatataaacacaactttaggaatattccac 30605186  T
Q  100 aactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactc 199  Q
    |||||||| |||||||||||| ||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  30605185 aactgattctgtaaagatatgcgcgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagggcgcccgtacaaataagcatgaactc 30605086  T
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagat 256  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  30605085 aggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagat 30605029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 38405927 - 38406212
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||||||    
T  38405927 aaatatggaaagtcctaaaatgtcggatcatttttaggatcgtccaaaacaataaaaaatatttcctaaaatataaacattactttaggaatattccaca 38406026  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |||||||||||  ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| ||| ||         
T  38406027 actgattctgtaaagatatacgcgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagggcacgcgtacaaacaagcaagatacag 38406126  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattgattccaa 286  Q
    |||||| |||||||||| | |||| |||||| ||||||||||||||||| | | ||||||||| ||||||||||||||| ||||||    
T  38406127 ggcacactgaaccgtgctaggatgctggaacatcgtatccaacatcttatagacatgcctgaatcatgttggaacattggttccaa 38406212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 279
Target Start/End: Complemental strand, 23420143 - 23419871
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    |||||||||||||||||||||||| | |||||||||   || |||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  23420143 gaaagtcctaaaatgtcggaacatttataggatcgttccaaccaataataaatatttcctaaaatataaaaactactttagaaatattccacaactgatt 23420044  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
     |   |||||||| || || |||  ||||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||| ||  |||||||| |||||    
T  23420043 cttagaagatatgcgcattgcttgatcaataagataaggaaatattgtttccttaaccaataaagggcgcgcgtacatacatgcgagaactcagacacat 23419944  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattg 279  Q
    |||||||||||| ||||||||| | | ||||||||||||||||| ||| |||| || |||||||| |||||||    
T  23419943 tgaaccgtgccaggatgttggagcattgtatccaacatcttacagagacgcctaaacacatgttgaaacattg 23419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 26328808 - 26328524
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||| |  |||||||| ||||||||||| ||| | |||||||||||| ||||    
T  26328808 aaatatggaaagtcctaaaatgtcagaacatctttaggagcgtccaaaacaacattaaatattttctaaaatataatcacaactttaggaatattacaca 26328709  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| | |||||||||||||||| ||| ||||| |||||||| |||  ||||||||||  | || | | ||||| |||||||||| |||||||||||    
T  26328708 actgattctataaagatatgtgcgttacttggtcaacaagataaggaaaagttgtttcctttta-aagataaggcgcgcgtacaaacaagcatgaactca 26328610  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattgattccaa 286  Q
    | |||| |||||| |     ||||||||||| ||||||||||||||| ||| |||| |||| ||||||||||||||||| ||||||    
T  26328609 gacacactgaaccatattgggatgttggaacatcgtatccaacatctcacatagatacctgtaacatgttggaacattggttccaa 26328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 23757850 - 23757564
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||  ||||| | |||||||||   || ||||||||||||||||||||||||||||  ||| ||||| |||||||||||    
T  23757850 aaatctggaaagtcctaaaatgtcaaaacatttataggatcgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccaca 23757751  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     || ||| |  ||||||||||| ||| ||| |||||||  ||||| |||||||||||||||||||||||||||| || ||||||   | ||||||||  |    
T  23757750 gctaattctccaaagatatgtgtgttgcttggtcaatacaataaggaaatattgtttccttaaacaataaagggtgcgcgtacatgtatgcatgaaccta 23757651  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | |||| |||| ||||||| ||||||||||| |||||||||||||| || | |||||||| || |||||||||||||||| ||||||    
T  23757650 gacacactgaatcgtgccaggatgttggaacatcgtatccaacatcatatagagatgcctaaacacatgttggaacattggttccaa 23757564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 23823306 - 23823020
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||  ||||| | |||||||||   || ||||||||||||||||||||||||||||  ||| ||||| |||||||||||    
T  23823306 aaatctggaaagtcctaaaatgtcaaaacatttataggatcgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccaca 23823207  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     || ||| |  ||||||||||| ||| ||| |||||||  ||||| |||||||||||||||||||||||||||| || ||||||   | ||||||||  |    
T  23823206 gctaattctccaaagatatgtgtgttgcttggtcaatacaataaggaaatattgtttccttaaacaataaagggtgcgcgtacatgtatgcatgaaccta 23823107  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | |||| |||| ||||||| ||||||||||| |||||||||||||| || | |||||||| || |||||||||||||||| ||||||    
T  23823106 gacacactgaatcgtgccaggatgttggaacatcgtatccaacatcatatagagatgcctaaacacatgttggaacattggttccaa 23823020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 274
Target Start/End: Original strand, 18221675 - 18221949
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||| |||||||||||||||  ||| |||||||   ||||||||| ||||||||||| ||| | |||||||||||| ||||    
T  18221675 aaatatggaaagtcctaaaatgtaggaacatctttaggaatgtccaaaacaacttcaaatattttctaaaatataatcacaactttaggaatattacaca 18221774  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaa-caggcatgaactc 199  Q
    ||||||  |||||||||||||| ||| |||  ||||||||||||| |||||  ||||||||||| |||    ||| |||||||||| || ||||||        
T  18221775 actgatcctgtaaagatatgtgtgttgcttgatcaataagataaggaaatacggtttccttaaataatcttaggcacacgtacaaagcatgcatgataca 18221874  T
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaa 274  Q
     |||||| |||||| | ||||||||||||||| || |||||||||||||||||| || |||||| ||||||||||    
T  18221875 tggcacactgaaccattccaagatgttggaacatcatatccaacatcttacaaacatacctgaaccatgttggaa 18221949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 22251634 - 22251348
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||| ||||| | || ||||||  |||||||||  |||||||||||||||||||||    | ||||| |||||||||||    
T  22251634 aaatctggaaagtcctaaaatgtcgcaacatttatacgatcgttcaaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccaca 22251535  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     || ||| |   | |||||| ||||| |||  | |||||| |||| ||||| ||||||||||||| ||||||||||| |||||||||||||  |||||||    
T  22251534 gctaattcttggatgatatgcgcgttgcttgattaataagttaaggaaatactgtttccttaaacgataaagggcgcgcgtacaaacaggcgagaactca 22251435  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||||||| ||||||||| | |||||||||||||||| |||||| |||| || |||||||| ||| ||| ||||||    
T  22251434 ggcacactgaaccgtgccaggatgttggagcatcgtatccaacatctttcaaagacgcctaaacacatgttgaaactttggttccaa 22251348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 24190429 - 24190704
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||| ||||  |||||||||||||||||||||    | ||||| ||||||| |||    
T  24190429 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaaaaatattaaatatttcctaaaatataaaatacactttagaaatattctaca 24190528  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   | |||||| ||||| |||  |||||| |||||| |||||||||||||||||||||||| |||||| |||||||| ||||  |||||||    
T  24190529 gctgattcttagatgatatgcgcgttacttgatcaatatgataaggaaatattgtttccttaaacaataaggggcgcgcgtacaaataggcgagaactca 24190628  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaac 275  Q
     ||||| ||||||||||||  |||||||| | |||||||||||||||| |||||| |||| || ||||||||||||    
T  24190629 agcacactgaaccgtgccagaatgttggagcatcgtatccaacatcttccaaagacgcctaaacacatgttggaac 24190704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 9422102 - 9421868
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    |||||||||||||||| ||||||| | |||||||||   || |||||| |||||||||||||||||||||  ||| ||||| |||||| |||| ||||||    
T  9422102 gaaagtcctaaaatgttggaacatttataggatcgttccaaccaataataaatatttcctaaaatataaaatctaatttagaaatatttcacagctgatt 9422003  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
     |   |||||||| |  || |||  ||||||||||||| |||||||||||||||||||||||| |||||| |||||||  |||||||||| ||||| ||     
T  9422002 cttagaagatatgcgtattgcttgatcaataagataaggaaatattgtttccttaaacaataaggggcgcgcgtacaagtaggcatgaacccaggctcac 9421903  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaa 242  Q
    |||||||||| | ||||||||||| ||||||||||    
T  9421902 tgaaccgtgctaggatgttggaacatcgtatccaa 9421868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 9 - 286
Target Start/End: Complemental strand, 22404347 - 22404068
Alignment:
Q  9 aaagtcctaaaatgtcggaacatctt-taggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    ||||||||||||||||| ||||| || |||||||||   ||||||||| |||||||||||||||||||||    | ||||| |||||| ||||  |||||    
T  22404347 aaagtcctaaaatgtcgaaacattttataggatcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatatttcacagttgatt 22404248  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
     |   |||||||| || || |||  |||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||  ||| |||| || |     
T  22404247 cttagaagatatgcgctttgcttgatcaataagctaaggaaatattgtttccttaaacaataacgggcgcacgtacaaacatgcgagaaatcagacatac 22404148  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| ||||| ||||||||||| | |||||||||||||| || ||| |||| || |||||||||||| ||| ||||||    
T  22404147 tgaaccatgccaggatgttggaacattgtatccaacatcttccagagacgcctaaacacatgttggaactttggttccaa 22404068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 22245952 - 22245724
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| ||||||||| |    
T  22245952 aaatctggaaagtcctaaaatgtcggaacatgtataggatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccata 22245853  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
      ||||| |   | |||||| ||||| |||  |||||||| |||| ||||  |||||||||||| ||||||| ||||  ||||||||| ||  ||||||     
T  22245852 gttgattcttagatgatatgcgcgttgcttgatcaataagttaaggaaattatgtttccttaaagaataaagtgcgcgggtacaaacaagcgagaactcg 22245753  T
Q  201 ggcacattgaaccgtgccaagatgttgga 229  Q
    |||||| |||||||||||| |||||||||    
T  22245752 ggcacactgaaccgtgccaggatgttgga 22245724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 277
Target Start/End: Complemental strand, 20714234 - 20714060
Alignment:
Q  102 ctgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaaca-ataaagggcgcacgtacaaacaggcatgaactca 200  Q
    |||||| |||| ||||||| ||||| ||| |||| ||||||| |  || || ||||||||||| | |||||| ||||  |||||||||||||||||   |    
T  20714234 ctgattctgtacagatatgcgcgttgcttggtcagtaagatacgggaaaatggtttccttaaaaagataaagcgcgc--gtacaaacaggcatgaaagaa 20714137  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    |||||| | |||||| ||| ||||||||||| ||||||| ||||||||| | |||||||||||||||||||||||||    
T  20714136 ggcacactaaaccgttccaggatgttggaacatcgtatctaacatcttatagagatgcctgaaacatgttggaacat 20714060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 13941430 - 13941332
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| ||||||| ||   |||||||||||||| || || ||||||||||| || |||||||||||||||||| |||||| ||||||||||||||||    
T  13941430 cgtacaatcaggcataaaactaggcacattgaaccatgtcaggatgttggaacatcatatccaacatcttacaaaaatgcctaaaacatgttggaacat 13941332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 23624607 - 23624692
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattgattccaa 286  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||||| | |||| |||| |||||||| |||||| ||||||    
T  23624607 ggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagacatgcttgaatcatgttgggacattggttccaa 23624692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25105053 - 25104977
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaa 77  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||||||||||||||||||||    
T  25105053 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaatattaaatatttcctaaaatataaa 25104977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25164146 - 25164070
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaa 77  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||||||||||||||||||||    
T  25164146 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaatattaaatatttcctaaaatataaa 25164070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 22183711 - 22183661
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||| ||||    
T  22183711 ggcacactgaaccgtgccaagatattggaacatcgtatccaacatcataca 22183661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 20127705 - 20127753
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctta 249  Q
    |||||| |||||||| || |||||||||||| |||||||||||||||||    
T  20127705 ggcacactgaaccgtacccagatgttggaacatcgtatccaacatctta 20127753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 17660854 - 17660812
Alignment:
Q  204 acattgaaccgtgccaagatgttggaacgtcgtatccaacatc 246  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||    
T  17660854 acattgaactgtgccaacatgttggaacatcgtatccaacatc 17660812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 23624449 - 23624512
Alignment:
Q  9 aaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataa 76  Q
    ||||||||||||||| ||||||||||||||| | || |||||||     |||||||||||||||||||    
T  23624449 aaagtcctaaaatgtaggaacatctttaggaacttccaaaacaa----caatatttcctaaaatataa 23624512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 24118309 - 24118357
Alignment:
Q  203 cacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||| ||||||||||||||||||||||||  | ||||||||||| ||||    
T  24118309 cacactgaaccgtgccaagatgttggaacagcatatccaacatcataca 24118357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 29545734 - 29545456
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  29545734 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatactactttaggaatattccaca 29545635  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| ||||||||||||  |||| |||  ||||||||||| | ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||    
T  29545634 actgattctgtaaagatatgcacgttgcttgatcaataagatacggaaatattgtttccttaaacaataaagggcgcgcgtacaaataggcatgaaccca 29545535  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacatt 278  Q
    | |||| |||||| ||| | ||||||||||| | ||||||||||||||||| |||||||| || |||||||||||||||    
T  29545534 gacacactgaaccatgctaggatgttggaacattgtatccaacatcttacagagatgcctaaacacatgttggaacatt 29545456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 20992109 - 20992368
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||   |  |||||||||||||||||||||||||||| |||| ||||| ||||||| |||    
T  20992109 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgttccacccaataacaaatatttcctaaaatataaatactactttagaaatattcaaca 20992208  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
      ||||| |||| ||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| | || |||||||| ||||||||||  |    
T  20992209 gttgattttgtatagatatgcgcgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagagtgcgcgtacaaataggcatgaaccta 20992308  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcct 260  Q
    |||||| |||||||||||| ||||||||||| || |||||||||||||||| ||||||||    
T  20992309 ggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagagatgcct 20992368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 12326377 - 12326653
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaa-taacaaatatttcctaaaatataaacactagtttaggaatattccac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  ||||| |||||||||||| |||||||||||| |||| ||||| ||||||||||    
T  12326377 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtttccaacaaataacaaatattttctaaaatataaatactactttagaaatattccac 12326476  T
Q  100 aactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactc 199  Q
    | || |||  ||| ||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||| | || |||||||  |||||||||| |    
T  12326477 agctaattcggtatagatatgcgcgtttcttggtcaataagataaggaaatattgtttccttaaacaataaagagtgcgcgtacaagtaggcatgaaccc 12326576  T
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaac 275  Q
    | ||||| |||||||||||| ||||||||||| ||||||||||||||||| | |||||||| || ||||||||||||    
T  12326577 atgcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttatagagatgcctaaacacatgttggaac 12326653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 14927214 - 14927489
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| || |||    ||||||||||||||| ||||| |||   |||||||||||||||||    
T  14927214 aaatatggaaagtcctaaaatgtaggaacatctttaggagcgtccaatacagcttcaaatatttcctaaa-tataatcacatctttaggaatattccaca 14927312  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |||||||||||| | ||| ||| |||||  |||||||||||||| ||||||||||| |||||| ||||| ||||||||| | |||||    |    
T  14927313 actgattctgtaaagatatgcgtgttgcttggtcaa--agataagaaaatatggtttccttaaataataaaaggcgcgcgtacaaaccgacatgatacaa 14927410  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
    |||||| | |||||||||| ||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||    
T  14927411 ggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttaaagagatgtctgaaacatgttggaacattg 14927489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 15350680 - 15350955
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| || |||    ||||||||||||||| ||||| |||   |||||||||||||||||    
T  15350680 aaatatggaaagtcctaaaatgtaggaacatctttaggagcgtccaatacagcttcaaatatttcctaaa-tataatcacatctttaggaatattccaca 15350778  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |||||||||||| | ||| ||| |||||  |||||||||||||| ||||||||||| |||||| ||||| ||||||||| | |||||    |    
T  15350779 actgattctgtaaagatatgcgtgttgcttggtcaa--agataagaaaatatggtttccttaaataataaaaggcgcgcgtacaaaccgacatgatacaa 15350876  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
    |||||| | |||||||||| ||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||||    
T  15350877 ggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttaaagagatgtctgaaacatgttggaacattg 15350955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 16207474 - 16207200
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||| || ||||||||| | |||||||||   || |||||| |||||||||||||||||||||   || ||||| ||||||| |||    
T  16207474 aaatatggaaagtcctaacatatcggaacatttataggatcgttccaaccaataaaaaatatttcctaaaatataaaatatactttagaaatattcgaca 16207375  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |  ||||||||||| ||| |||  |||| |||||||| |||||||||||||||||||||||||||| || |||||||  |||||||||| ||    
T  16207374 actgattcttcaaagatatgtgtgttgcttgatcaacaagataaggaaatattgtttccttaaacaataaagggtgcgcgtacaagtaggcatgaaccca 16207275  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaa 274  Q
    |||||| |||||| ||||| ||||||||||| || |||||||||||||||| |||||||| || |||||||||||    
T  16207274 ggcacactgaaccatgccaggatgttggaacatcatatccaacatcttacagagatgcctaaacacatgttggaa 16207200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 286
Target Start/End: Original strand, 4459308 - 4459591
Alignment:
Q  4 tatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaact 103  Q
    |||||||| ||||||||||||| ||||| | |||||||||   || ||||||||||||||||| ||||||||||  ||| ||||| ||||||||||| ||    
T  4459308 tatggaaaatcctaaaatgtcgaaacatttataggatcgttccaaccaataacaaatatttccaaaaatataaaatctactttagaaatattccacagct 4459407  T
Q  104 gattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggc 203  Q
    |||| || | ||||||  ||||| ||| | ||||||| |||| ||||||||||||| ||||||||||||||||| |||||||| ||||||||||  ||||    
T  4459408 gattctggatagatattcgcgttgcttggacaataagttaaggaaatattgtttccataaacaataaagggcgcgcgtacaaataggcatgaacctaggc 4459507  T
Q  204 acattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||| |||| ||||| | ||||||||||| | ||||||||||||||||| |||||||| || | |||||||||||||| ||||||    
T  4459508 acactgaatcgtgctaggatgttggaacattgtatccaacatcttacagagatgcctaaacagatgttggaacattggttccaa 4459591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 50 - 286
Target Start/End: Original strand, 15506845 - 15507082
Alignment:
Q  50 caataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaa 149  Q
    ||||||||||||||||||||||||||||   || ||||| |||||||||||||||||| |  ||||||||| || || ||| ||||||||||||||||||    
T  15506845 caataacaaatatttcctaaaatataaaatatactttagaaatattccacaactgattcttcaaagatatgcgcatttcttggtcaataagataagaaaa 15506944  T
Q  150 tattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctta 249  Q
    ||||||||||||||||||||||| |||| ||||||   ||||| |||| |||||| | | ||||||| || |||||| |||| |||||||||||||||||    
T  15506945 tattgtttccttaaacaataaagagcgcgcgtacaggtaggcaagaacccaggcatacttaaccgtgtcaggatgtttgaacatcgtatccaacatctta 15507044  T
Q  250 caaagatgcctgaa-acatgttggaacattgattccaa 286  Q
     | |||||||| || |||||||||||||||| ||||||    
T  15507045 tagagatgcctaaacacatgttggaacattggttccaa 15507082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 15438643 - 15438928
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||| || |||||||||| ||||| | ||||||||| | || ||||||||||||||||||||||||||||   || ||||| ||||||||| |    
T  15438643 aaatatggaaactcttaaaatgtcgaaacatttataggatcgt-tcaaccaataacaaatatttcctaaaatataaaatatactttagaaatattccaaa 15438741  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
      ||||| |  ||||||||| || || ||| ||||||||||||||||||||||||||||||||||||||||| | |  ||||||   ||||| |||| ||    
T  15438742 gttgattcttcaaagatatgcgcattgcttggtcaataagataagaaaatattgtttccttaaacaataaagagtgtgcgtacaggtaggcaagaaccca 15438841  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| | ||||||| || ||||||  ||| ||||||||||||||||||| |||||||| || ||||||| |||||||| ||||||    
T  15438842 ggcacacttaaccgtgtcaggatgtttaaacatcgtatccaacatcttacagagatgcctaaacacatgtttgaacattggttccaa 15438928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 11521005 - 11520718
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaa-cactagtttaggaatattccac 99  Q
    |||| |||||||||||||||||||| ||||| | |||||||||   ||||||||| ||||||||||||||||||||| ||| | ||||| ||||||||||    
T  11521005 aaatctggaaagtcctaaaatgtcgaaacatttataggatcgttccaaacaataataaatatttcctaaaatataaaacacaa-tttagaaatattccac 11520907  T
Q  100 aactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtac-aaacaggcatgaact 198  Q
    ||| |||| |   |||||||| ||||| |||  |||||||| |||| ||||||||||||||||||||||||||||||| ||||| ||||||||  |||||    
T  11520906 aaccgattcttagaagatatgggcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaaacaggcgagaact 11520807  T
Q  199 caggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |   |||| |||||||||||| ||||||| | | | |||||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  11520806 cgaacacactgaaccgtgccaggatgttgaagcattgtatccaacatcttccatagacgcctaaacacatgttgaaactttggttccaa 11520718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 16437341 - 16437513
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| |||||||   ||||||||||||||||||||| ||| | |||||||||||||||||    
T  16437341 aaatatggaaagtcctaaaatataggaacatctttaggaacgtccaaaacaacttcaaatatttcctaaaatataatcacaactttaggaatattccaca 16437440  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagg 173  Q
    ||||||  || ||||||||||||||| |||  ||||||||||||| | |||| ||||||||||| ||||||||    
T  16437441 actgatcctgcaaagatatgtgcgttgcttgatcaataagataaggacatatggtttccttaaataataaagg 16437513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 52 - 274
Target Start/End: Complemental strand, 16222115 - 16221892
Alignment:
Q  52 ataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaata 151  Q
    ||||||||||||||||||||||||||  ||| ||||| ||| || ||||||||||| |  ||||||||||||||| ||  ||||| |||||||| |||||    
T  16222115 ataacaaatatttcctaaaatataaaacctactttagaaatttttcacaactgattcttcaaagatatgtgcgttgctaggtcaacaagataaggaaata 16222016  T
Q  152 ttgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||||||||||||||| |||||| || | |||||  ||| ||||||  || |||| | || | ||||| ||||||||||| |||||||||||||||||||    
T  16222015 ttgtttccttaaacaagaaagggggcgcatacaagtaggtatgaacctagacacagtaaatcatgccaggatgttggaacatcgtatccaacatcttaca 16221916  T
Q  252 aagatgcctgaa-acatgttggaa 274  Q
     ||||||| ||| |||||||||||    
T  16221915 gagatgccagaacacatgttggaa 16221892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 160
Target Start/End: Original strand, 10280427 - 10280579
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    |||||||||||||||| ||||||||||||||| |||| |||||||   ||||||||||||||||||||| ||| | ||||||||||| |||||||||||     
T  10280427 gaaagtcctaaaatgtaggaacatctttaggaacgtccaaaacaacttcaaatatttcctaaaatataatcacaactttaggaatatgccacaactgatc 10280526  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttcct 160  Q
    || |||||||||| | ||| |||||||||||||||||| ||||| ||||||||    
T  10280527 atataaagatatgcgtgttgctttgtcaataagataaggaaatactgtttcct 10280579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 645702 - 645942
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | || ||||||   ||||||||    |||||||||||||||||||    | ||||| ||||||||||     
T  645702 aaatctggaaagtcctaaaatgtcggaacatttatatgatcgttccaaacaatattcgatatttcctaaaatataaaatacactttagaaatattccac- 645800  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
      ||||| |   | |||||| ||||  |||  |||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||  |||||||    
T  645801 --tgattcttagatgatatgcgcgtagcttgatcaataagttaagaaaatattgtttccttaaacaataaa-gacgcgcgtacaaacaggcgagaactca 645897  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| |||||||||||| ||||||| | | ||| |||||||||    
T  645898 ggcacactgaaccgtgccaggatgttgaagcatcgcatccaacat 645942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 98 - 274
Target Start/End: Original strand, 10661526 - 10661701
Alignment:
Q  98 acaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaac 197  Q
    |||||||||| |||| ||||||| ||||| ||| | ||  |||||| |||||    ||||||||||  || ||| | ||| |||||||| |||||||||     
T  10661526 acaactgattctgtatagatatgcgcgttgcttggccaccaagatatgaaaacgaggtttccttaat-aagaaaagacgcgcgtacaaataggcatgaaa 10661624  T
Q  198 tcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaa 274  Q
    ||||||||| |||||||||| | ||||||||||| ||||||||||||||||||| | |||||| |||||||||||||    
T  10661625 tcaggcacactgaaccgtgctaggatgttggaacatcgtatccaacatcttacataaatgcctaaaacatgttggaa 10661701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 26132350 - 26132272
Alignment:
Q  199 caggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    |||||||| |||||||||||| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  26132350 caggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagagatgcctgaaacatgttggaacat 26132272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 278
Target Start/End: Complemental strand, 20924603 - 20924423
Alignment:
Q  98 acaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaac 197  Q
    |||| |||||||||| ||||||| ||||  ||| ||||  |||||||| |||||| ||||||||||| |||| |  ||   || | |||||| ||||||     
T  20924603 acaattgattatgtacagatatgcgcgtagcttggtcagcaagataaggaaatatggtttccttaaataatataacgcatgcgcataaacagacatgaaa 20924504  T
Q  198 tcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacatt 278  Q
      ||||||| |||| | ||||| ||||||||||| ||||||||||||||||||  ||||||||||| ||||||| ||||||    
T  20924503 caaggcacactgaatcttgccaggatgttggaacatcgtatccaacatcttacggagatgcctgaaccatgttgaaacatt 20924423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 286
Target Start/End: Complemental strand, 23082196 - 23082084
Alignment:
Q  174 gcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttgga 273  Q
    |||| |||| || ||||||| || | ||||||| |||||||||||| ||||||||||| || |||||||||||||||| | |||||| ||||||||||||    
T  23082196 gcgcgcgtataatcaggcataaaataaggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagaaatgcctaaaacatgttgga 23082097  T
Q  274 acattgattccaa 286  Q
    |||| | ||||||    
T  23082096 acatagtttccaa 23082084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 21261195 - 21261272
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| |||||||||||| ||||||||||| || |||||||||||||||| | |||||| ||||||||||||||||    
T  21261195 aggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagaaatgcctaaaacatgttggaacat 21261272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 23960769 - 23960860
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgtt 270  Q
    ||||||| ||||||| || | ||||||| |||| ||||||| ||||||||||| ||||||||||||||||||| | |||||| |||||||||    
T  23960769 cgtacaatcaggcataaaataaggcacactgaatcgtgccaggatgttggaacatcgtatccaacatcttacagaaatgcctaaaacatgtt 23960860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 249
Target Start/End: Original strand, 14165736 - 14165974
Alignment:
Q  6 tggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactga 105  Q
    ||||||||||||||||||||||| || | ||||| |||   |||||| || ||||||||||||||||||||   ||| ||||| ||||||||||  ||||    
T  14165736 tggaaagtcctaaaatgtcggaaaatttataggagcgttccaaacaaaaataaatatttcctaaaatataatatctactttagaaatattccaccgctga 14165835  T
Q  106 ttatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcac 205  Q
    || |   | |||||| | ||| |||  |||||||| |||| |||||||||||||    || |||| |||||| |||||| | |||||||||| |||||||    
T  14165836 ttcttagatgatatgcgtgttgcttgatcaataagttaaggaaatattgtttcc----ac-ataacgggcgcgcgtacatataggcatgaacccaggcac 14165930  T
Q  206 attgaaccgtgccaagatgttggaacgtcgtatccaacatctta 249  Q
    | | | |  ||| | |||||||| || | |||||||||||||||    
T  14165931 acttagctatgctaggatgttgggacattgtatccaacatctta 14165974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 42636950 - 42637043
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttgg 272  Q
    |||||||| |||||||||  ||| |||| |||||||||||| || |||||||| |||||| |||||||||||| | |||| | |||||||||||    
T  42636950 cgtacaaataggcatgaaagcagacacactgaaccgtgccaggacgttggaacatcgtattcaacatcttacagaaatgcttaaaacatgttgg 42637043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 10038145 - 10038047
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| ||||||| ||   ||||||| |||||| |||||  |||||||||| |  |||||||||||||||| | |||||| ||||||||||||||||    
T  10038145 cgtacaatcaggcataaaacaaggcacactgaaccatgccagtatgttggaacattatatccaacatcttacagaaatgcctaaaacatgttggaacat 10038047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11589031 - 11589105
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatata 75  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||||||| ||||||||||    
T  11589031 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaatattaaatatttgctaaaatata 11589105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 11999455 - 11999523
Alignment:
Q  9 aaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaa 77  Q
    |||||||||||||||| |||||| | |||||||||   || |||||| |||||||||||||||||||||    
T  11999455 aaagtcctaaaatgtcagaacatttataggatcgttccaaccaataataaatatttcctaaaatataaa 11999523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 19295519 - 19295567
Alignment:
Q  203 cacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  19295519 cacactgaaccgtgccaagatgttggaacatcgtatccaacatcataca 19295567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 10280609 - 10280686
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| ||||||||| || ||||||||||  ||||||||||||| || |  | |||||||||||||||| ||||||    
T  10280609 aggcacactgaaccgtggcaggatgttggaatatcgtatccaacatttttcttatatgcctgaaacatgttagaacat 10280686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 14688085 - 14688123
Alignment:
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatc 246  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  14688085 tgaaccgtgccaacatgttggaacatcgtatccaacatc 14688123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 19353881 - 19353922
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaa 242  Q
    |||||| ||||||||||||| |||||||||| ||||||||||    
T  19353881 ggcacactgaaccgtgccaacatgttggaacatcgtatccaa 19353922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 24902871 - 24902947
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| |||||||||| | ||||||||||| || ||||||||||||   | | |||||| ||||||||||||||||    
T  24902871 aggcacactgaaccgtgc-aggatgttggaacatcatatccaacatctcgtagaaatgcctaaaacatgttggaacat 24902947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 26193724 - 26193683
Alignment:
Q  210 aaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||| ||||||||||||||||| |||||||||||||| ||||    
T  26193724 aaccatgccaagatgttggaacatcgtatccaacatcataca 26193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 7585942 - 7585870
Alignment:
Q  202 gcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaa 274  Q
    ||||| |||||||| ||| || |||||||| || |||||  ||||||| ||| |||||| |||||||||||||    
T  7585942 gcacactgaaccgtaccaggaagttggaacatcatatcccgcatcttataaaaatgcctaaaacatgttggaa 7585870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 172; Significance: 2e-92; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 12039301 - 12039025
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  12039301 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatactactttagaaatattccaca 12039202  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |||||||||||||| ||| ||| |||||||||||||| |||||||||||||  |||||||||||||||| |||| ||  |||||||||| ||    
T  12039201 gctgattctgtaaagatatgtgtgttgcttggtcaataagataaggaaatattgtttcc--aaacaataaagggcgcgcgtaaaagtaggcatgaaccca 12039104  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacatt 278  Q
    | |||| |||||||||||||||||||||||| | | ||||||||||||||| |||||||| || |||||||||||||||    
T  12039103 gacacactgaaccgtgccaagatgttggaacattgcatccaacatcttacagagatgcctaaacacatgttggaacatt 12039025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 17864067 - 17863781
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||| | || ||||| |||||||||||    
T  17864067 aaatatggaaagtcctaaaatgtcggaacatcattaggatcgtccaaaacaataacaaatattttctaaaatataaatattactttagaaatattccaca 17863968  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||| ||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  17863967 actgagtatgtaaagatatgtgcgttgtttggtcaataagataaggaaatattgtttccttaaacaataaagggcgcacgtacaaataggcatgaaccca 17863868  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||||   |||||||||| | ||||||  ||| || ||||| |||||||||| |||||||| || |||||||||||||||| ||||||    
T  17863867 ggcagtctgaaccgtgctacgatgttaaaacatcatatccgacatcttacagagatgcctaaacacatgttggaacattggttccaa 17863781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 20653635 - 20653917
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| | || ||||| |||||||||||    
T  20653635 aaatatggaaagtcctaaaatgttggaacatctttaggatcgtccaaaacaataacaaatatttcttaaaatataaatattactttagaaatattccaca 20653734  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||  |||||||||| ||    
T  20653735 gctgattctgtaaagatatgtgcgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagggcgcgcgtaaaagtaggcatgaaccca 20653834  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgatt 282  Q
    | |||| |||||||| ||| ||| ||||||| ||  ||||||||||||| | |||||||| || |||||||||||||||||||    
T  20653835 gacacactgaaccgttccaggatcttggaacatcacatccaacatcttatagagatgcctaaacacatgttggaacattgatt 20653917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 25805974 - 25806222
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||  ||| ||||  |||||||| ||    
T  25805974 aaatatggaaagtcctaaagtgtcggaacatctttaggatcgtctaaaacaatattaaatatctcctaaaatataaatgctactttaaaaatattcctca 25806073  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    | ||||| |||| ||||||| ||||| ||| |||||||||||||| ||||||||||||||| |||||| || ||| | |||||| |||||||||||| ||    
T  25806074 attgattctgtagagatatgcgcgttgcttggtcaataagataaggaaatattgtttccttcaacaatgaatggcacccgtacatacaggcatgaaccca 25806173  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctta 249  Q
    | |||| |||||||||||| ||||||||||| |||||||||||||||||    
T  25806174 gacacactgaaccgtgccaggatgttggaacatcgtatccaacatctta 25806222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 23882291 - 23882013
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||| ||||||||||||||| |||| ||||||    ||||||||||||||||||||| |||   |||||||||||||||||    
T  23882291 aaatttggaaagtcctaaaatgtaggaacatctttaggaacgtccaaaacagcttcaaatatttcctaaaatataatcacatctttaggaatattccaca 23882192  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| | |||||||||| ||||| ||| |||||||||||||| |||||| ||||||||||| |||| |  || |  |||||||||||||||||   |    
T  23882191 actgattctataaagatatgcgcgttgcttggtcaataagataaggaaatatggtttccttaaataatataaagcacgtgtacaaacaggcatgaaacaa 23882092  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
    |||||| ||||||||| || ||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||||||    
T  23882091 ggcacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacaaagatgcctaaaatatgtaggaacattg 23882013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 19077709 - 19077984
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||| ||||||||||||||||||||||||| | ||| |||||   || |||||| |||||||||||||||||||||  ||| ||||| |||||||||||    
T  19077709 aaatagggaaagtcctaaaatgtcggaacatttatagtatcgttccaaccaataataaatatttcctaaaatataaaatctactttagaaatattccaca 19077808  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| | ||| |||  ||||||| ||||| |||||||||||||||||||||| |||||||||||||||   |||||||| ||||    
T  19077809 gctgattcttagaagatatgcgtgttgcttgatcaataatataaggaaatattgtttccttaaacaatgaagggcgcacgtacatgtaggcatgagctca 19077908  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaac 275  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||| || ||||||||||||    
T  19077909 ggcacactgaaccgtgccaagatgttggaacatcgtatccaacatcttacaaacatgcctaaacacatgttggaac 19077984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 29253275 - 29252986
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||||    ||||||||||||||||||||| ||||| |||||||||||||||||    
T  29253275 aaatatggaaagtcctaaaatgtaggaacatcgttaggaacgtctaaaacagcttcaaatatttcctaaaatataatcactactttaggaatattccaca 29253176  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtaca-aacaggcatgaactc 199  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||||||||||||  ||||||||||| ||||   ||||| |||||| |||| ||| ||        
T  29253175 actgatcatgtaaagatatgcgcgttgcttggtcaataagataagaaaatacggtttccttaaataatattaggcgcgcgtacataacaagcaagataca 29253076  T
Q  200 aggcacattgaaccgtgccaagatgttggaa---cgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattgattccaa 286  Q
     |||||| |||||||||||| ||||||||||   ||||||||||||||||||| | | ||||||||| ||||||||||||||| ||||||    
T  29253075 tggcacactgaaccgtgccaggatgttggaacatcgtcgtatccaacatcttaaagacatgcctgaaccatgttggaacattggttccaa 29252986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 17235160 - 17235446
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | ||||||| |   ||||||||| ||||||||||||||||||||   ||| ||||| |||||||||||    
T  17235160 aaatctggaaagtcctaaaatgtcggaacatttataggatcattccaaacaataataaatatttcctaaaatataatatctaatttagaaatattccaca 17235259  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| | ||| |||  |||||||| |||| |||||||||||||||||||||||| |||||| |||||||||| ||  |||||||    
T  17235260 tctgattcttagaagatatgcgtgttgcttgatcaataagttaaggaaatattgtttccttaaacaataacgggcgcgcgtacaaacatgcgagaactca 17235359  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||||||| ||||||||| | ||||||||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  17235360 ggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttacagagacgcctaaacacatgttggaacattgattccaa 17235446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 20465487 - 20465302
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  20465487 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgttccaaccaataacaaatatttcctaaaatataaatactactttagaaatattccaca 20465388  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaa 186  Q
     |||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  20465387 gctgattctgtaaagatatgtgcgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagagcgcgcgtacaaa 20465302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 15930441 - 15930163
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||| |||||||||||||||| ||||||||||||||| |||| |||| |    |||||||||| |||||||||| |||   ||||||||| ||  | |    
T  15930441 aaatatagaaagtcctaaaatgtaggaacatctttaggaacgtccaaaatagcttcaaatatttcgtaaaatataatcacatctttaggaatgttatata 15930342  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||||||||| | || | |||||  ||||||||| |||||||   |    
T  15930341 actgattatgtaaagatatgtgcgttgcttggtcaataagataaggaaatatggtttccttaaatagtataaggcgcgtgtacaaacatgcatgaaacaa 15930242  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
    |||||| |||||||||||| ||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||    
T  15930241 ggcacactgaaccgtgccaggatgttggaacatcgtatccaatatcttacagagatgcctgaaacatgtttgaacattg 15930163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 33666358 - 33666643
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||| |||||||||||||||||||||    | ||||| |||||||||||    
T  33666358 aaatctggaaagtcctaaaatgtcggaacat-tataggatcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccaca 33666456  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |   ||| |||| ||||| |||  ||||||||||||| |||||||||||||||||||||||||||| || |||| ||||||||  |||||||    
T  33666457 actgattcttagaagttatgcgcgttacttgatcaataagataaggaaatattgtttccttaaacaataaagggtgcgcgtaaaaacaggcgagaactca 33666556  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||||||| ||||||||| | || ||||||||||||| |||||| |||| || |||||||| ||||||| ||||||    
T  33666557 ggcacactgaaccgtgccaggatgttggagcatcatatccaacatcttccaaagacgcctaaacacatgttgaaacattggttccaa 33666643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 8465264 - 8464974
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaa-taacaaatatttcctaaaata---taaacactagtttaggaatattc 96  Q
    |||||||||||||||||||||||| ||||||||||||||||||    ||||| ||||||||| |||||||||||   |||| |||| ||||| | |||||    
T  8465264 aaatatggaaagtcctaaaatgtcagaacatctttaggatcgttcccaacaaataacaaatagttcctaaaataatataaatactactttagaagtattc 8465165  T
Q  97 cacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaa 196  Q
    ||||  |||||  ||| ||||||| ||||| ||| |||||||||||||| || |||||||| ||||||||||||||||||| |||||||  ||| |||||    
T  8465164 cacagttgattccgtatagatatgcgcgttgcttggtcaataagataaggaactattgttttcttaaacaataaagggcgcgcgtacaagtaggaatgaa 8465065  T
Q  197 ctcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | |||||||| | |||||||||| ||||||||||| | ||||||||||||||| ||||| |||| || |||||||||||||||| ||||||    
T  8465064 cccaggcacactaaaccgtgccaggatgttggaacattgtatccaacatcttaaaaagaggcctaaacacatgttggaacattggttccaa 8464974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 286
Target Start/End: Complemental strand, 13869988 - 13869709
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    |||||||||||||||||||||||| | |||||||||   ||||||||| ||||||||||||||||||||   ||| ||||| |||||||||||||| |||    
T  13869988 gaaagtcctaaaatgtcggaacatttataggatcgttctaaacaataataaatatttcctaaaatataatatctactttagaaatattccacaactaatt 13869889  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
     |   |||||||| | ||| |||  ||||||||||||| ||||||||| |||||||||||||||||| ||||||||| | ||||  ||||||| |||||     
T  13869888 cttagaagatatgcgtgttgcttgatcaataagataaggaaatattgtgtccttaaacaataaagggtgcacgtacatataggcgagaactcaagcacac 13869789  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||||||||| ||||||||||  | | |||||||||||||||||||||||| || |||||||| ||||||| ||||||    
T  13869788 tgaaccgtgccaggatgttggaaaattgcatccaacatcttacaaagatgcctaaacacatgttgaaacattggttccaa 13869709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 286
Target Start/End: Original strand, 13195898 - 13196176
Alignment:
Q  9 aaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatta 108  Q
    |||||||||||||||||| | || | |||||||||   ||||||||| ||||||||||||||||||||   ||| ||||| ||||||||||| ||||||     
T  13195898 aaagtcctaaaatgtcggcatatttataggatcgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattc 13195997  T
Q  109 tgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacatt 208  Q
    |   |||||||| ||||| |||  || || ||||||  ||||||||||||||||||||||||||||||||  |||||  |||||||||| |||||||| |    
T  13195998 ttagaagatatgcgcgttgcttgatccattagataaacaaatattgtttccttaaacaataaagggcgcatatacaagtaggcatgaacccaggcacact 13196097  T
Q  209 gaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||||||||||| ||||||||||| ||||||||||||||||| | ||||| || || |||||||||||||||| ||||||    
T  13196098 gaaccgtgccaggatgttggaacatcgtatccaacatcttatagagatgtctaaacacatgttggaacattggttccaa 13196176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 17855761 - 17856047
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||    |||||||| |||||||||||||||||||||    | ||| | |||||||||||    
T  17855761 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccgaacaataataaatatttcctaaaatataaaatacactttcgaaatattccaca 17855860  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| || || |||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  17855861 gctgattcttagaagatatgcgcattgcttgatcaataagttaagaaaatattgtttccttaaacaataaagggtgcacgtacaaacaagcaagaactca 17855960  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||||| | ||||||| | | ||| |||||||||||| || ||| |||| || | |||||||||| ||||||||||    
T  17855961 ggcacactgaaccgtgctaggatgttgaagcatcgcatccaacatcttccagagacgcctaaacaaatgttggaactttgattccaa 17856047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 275
Target Start/End: Complemental strand, 20989381 - 20989108
Alignment:
Q  3 atatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaac 102  Q
    |||||||||||| |||||| ||||||||| | || ||||||   || ||||||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  20989381 atatggaaagtcgtaaaatatcggaacatttataagatcgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccacaac 20989282  T
Q  103 tgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcagg 202  Q
    ||||| |   |||||||| ||||| ||   ||||||||| ||| |||||||||||||||| ||||||||| |||| |||||||  ||||||||||  ||     
T  20989281 tgattcttagaagatatgcgcgttgctagatcaataagaaaaggaaatattgtttccttatacaataaagcgcgctcgtacaagtaggcatgaaccaaga 20989182  T
Q  203 cacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaac 275  Q
    |||| |||||||||  | |||||| |||| |||||||||| |||||||| |||||||| || ||||||||||||    
T  20989181 cacactgaaccgtgtgaggatgtttgaacatcgtatccaatatcttacatagatgcctaaacacatgttggaac 20989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 23879451 - 23879737
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||||||||| ||||||||||    | ||||| |||||||||||    
T  23879451 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaatattaaatatttcccaaaatataaaatacactttagaaatattccaca 23879550  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |   | |||||| | ||| |||  |||||||| |||| |||||||||||||||||||||||||||| ||  |||||||||||    ||||||    
T  23879551 actgattcttagatgatatgcgtgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggtgcgtgtacaaacaggtgaaaactca 23879650  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||||||| ||||||||| | |||||||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  23879651 ggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttccagagacgcctaaacacatgttgaaactttggttccaa 23879737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 6 - 286
Target Start/End: Complemental strand, 21706118 - 21705837
Alignment:
Q  6 tggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactga 105  Q
    |||||||||||||||||||||||||| | ||||||| |   ||| ||||| ||||||||||||||||||||   ||| ||||| ||||||||||||||||    
T  21706118 tggaaagtcctaaaatgtcggaacatttataggatcattccaaataataataaatatttcctaaaatataatatctactttagaaatattccacaactga 21706019  T
Q  106 ttatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcac 205  Q
    || |   | |||||  ||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||| | || | | ||||| |||| |||||||    
T  21706018 ttcttagatgatatacgcgttgcttggtcaataagataaggaaatattgtttacttaaacaataaagggcgcgcataaatataggcaagaacccaggcac 21705919  T
Q  206 attgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctga-aacatgttggaacattgattccaa 286  Q
    | |||| | ||||||||| ||||||| | ||||||||||||||| | || ||||| |  |||||||||||| ||| ||||||    
T  21705918 actgaagcatgccaagatattggaacattgtatccaacatcttatagagttgcctaaccacatgttggaactttggttccaa 21705837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 84 - 286
Target Start/End: Original strand, 25970326 - 25970529
Alignment:
Q  84 tttaggaatattccacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtac 183  Q
    ||||| ||||||||||| |||||| |   || ||||| ||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||| ||    
T  25970326 tttagaaatattccacagctgattcttagaaaatatgcgcgttgcttagtcaataagttaaggaaatattgtttccttaaacaataaagggcgcacgcac 25970425  T
Q  184 aaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgatt 282  Q
    |||||||    |||||||||||| |||||||||||||||||||||| | || |||||||||||||||| ||| |||| || |||||||||||||||| ||    
T  25970426 aaacaggtgacaactcaggcacactgaaccgtgccaagatgttggagcatcatatccaacatcttacagagacgcctaaacacatgttggaacattggtt 25970525  T
Q  283 ccaa 286  Q
    ||||    
T  25970526 ccaa 25970529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 84 - 286
Target Start/End: Original strand, 25974766 - 25974969
Alignment:
Q  84 tttaggaatattccacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtac 183  Q
    ||||| ||||||||||| |||||| |   || ||||| ||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||| ||    
T  25974766 tttagaaatattccacagctgattcttagaaaatatgcgcgttgcttagtcaataagttaaggaaatattgtttccttaaacaataaagggcgcacgcac 25974865  T
Q  184 aaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgatt 282  Q
    |||||||    |||||||||||| |||||||||||||||||||||| | || |||||||||||||||| ||| |||| || |||||||||||||||| ||    
T  25974866 aaacaggtgacaactcaggcacactgaaccgtgccaagatgttggagcatcatatccaacatcttacagagacgcctaaacacatgttggaacattggtt 25974965  T
Q  283 ccaa 286  Q
    ||||    
T  25974966 ccaa 25974969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 9281303 - 9281017
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||| ||||||||||||||||| | |||||||||   ||||||||| ||||||||||||||| |||||    | ||||| |||||| ||||    
T  9281303 aaatctggaaagttctaaaatgtcggaacatttataggatcgttctaaacaataataaatatttcctaaaacataaaatacactttagaaatatttcaca 9281204  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| | | | |||||| ||||| |||  |||||||| |||| ||||||||||| |||||||||| ||||||||  ||||||||||||  |||||||    
T  9281203 gctgattctttgatgatatgcgcgttgcttgatcaataagttaaggaaatattgttttcttaaacaatgaagggcgcgtgtacaaacaggcgagaactca 9281104  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||| ||||||| ||||||||| | || ||||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  9281103 ggcacactgaatcgtgccaggatgttggagcatcatatccaacatctttcagagacgcctaaacacatgttgaaactttggttccaa 9281017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 19100463 - 19100668
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   || |||||| |||||||||||||||||||||  ||| ||| | |||||||||||    
T  19100463 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaccaataataaatatttcctaaaatataaaatctactttggaaatattccaca 19100562  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||||| ||| |||  ||||||||||||| |||||||||||||||||||||||||||| || |||||||  ||||||||||  |    
T  19100563 gctgattcttagaagatatgtgtgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagggtgcgcgtacaagtaggcatgaaccta 19100662  T
Q  201 ggcaca 206  Q
    ||||||    
T  19100663 ggcaca 19100668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 286
Target Start/End: Complemental strand, 21722993 - 21722715
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    ||||||||||||| |||  ||||| | |||||||||   ||| ||||| ||||||||||||||||||||   ||| ||||| ||||||| ||| ||||||    
T  21722993 gaaagtcctaaaaagtcaaaacatttataggatcgttccaaataataataaatatttcctaaaatataatatctactttagaaatattctacagctgatt 21722894  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
     |   | ||||| |||||| | | |||||||||||||| ||| ||||||||||||||||||||||||||| || ||| | ||||| |||| ||||||||     
T  21722893 cttagatgatatatgcgttgcctggtcaataagataaggaaagattgtttccttaaacaataaagggcgcgcg-acatataggcaagaacccaggcacac 21722795  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctga-aacatgttggaacattgattccaa 286  Q
    |||||| ||||| ||||||||||| | ||||||||||||||||| || ||||| |  |||||||||||| ||| ||||||    
T  21722794 tgaaccatgccaggatgttggaacattgtatccaacatcttacagagttgcctaaccacatgttggaactttggttccaa 21722715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 19171988 - 19172237
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    |||||||||||||  ||||||||| | |||||||||   || |||||| |||||||||||||||||||||  ||| ||||| ||| |||| || ||||||    
T  19171988 gaaagtcctaaaaattcggaacatttataggatcgttccaaccaataataaatatttcctaaaatataaaatctactttagaaatgttccgcagctgatt 19172087  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
     |   |||||||| ||||| |||  ||||||||||||| ||||| ||||||||||||||||||||||||| |||||||  | ||||||||  |||| |||    
T  19172088 cttagaagatatgcgcgttacttgatcaataagataaggaaataatgtttccttaaacaataaagggcgcgcgtacaagta-gcatgaacctaggctcat 19172186  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgc 258  Q
    |||||||||||| ||||||||| | || || ||||||||||| | ||||||    
T  19172187 tgaaccgtgccaggatgttggagcatcatacccaacatcttatagagatgc 19172237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 19894263 - 19894002
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| ||||||||||||||||||||||| || | |||||||||  |||||||||| |||||||| ||| ||| ||||    | ||||| |||||||||||    
T  19894263 aaatctggaaagtcctaaaatgtcggaaaatgtataggatcgttcaaaacaataataaatattttctataatgtaaaatacactttagaaatattccaca 19894164  T
Q  101 actgattatg-ta-aagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaact 198  Q
    |||  || |  || |||||||| ||||| |||  |||||||| |||| ||||||||||||||||| ||||||||| ||  || ||||| ||||  ||| |    
T  19894163 actctttcttatagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaagcaataaaggtcgtgcgcacaaaaaggcgagaatt 19894064  T
Q  199 caggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcct 260  Q
    |||||||| |||||||||||||||||||||| | |||||||||||||||| || ||||||||    
T  19894063 caggcacactgaaccgtgccaagatgttggagcatcgtatccaacatcttccagagatgcct 19894002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 12028736 - 12028561
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||| ||||||||||||||||||||||| | || ||||||   |  ||||||||||||||| | ||||||||||  ||| ||||| |||||||||||    
T  12028736 aaatatgaaaagtcctaaaatgtcggaacatttataagatcgttccagccaataacaaatatttgccaaaatataaaatctactttagaaatattccaca 12028637  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcg 176  Q
     |||||| |||| ||||||| | ||| ||| | ||||| |||||| ||||||||||||||||||||||||||||||    
T  12028636 gctgattctgtatagatatgcgtgttgcttggacaataggataaggaaatattgtttccttaaacaataaagggcg 12028561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 17527470 - 17527230
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    |||||||||||||||||||||||| | |||||||||   ||||||||  ||||||||| |||||||||||    | ||||| |||||| ||||  |||||    
T  17527470 gaaagtcctaaaatgtcggaacatttataggatcgttccaaacaatattaaatatttcttaaaatataaaatacactttagaaatatttcacagttgatt 17527371  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
     |   | |||||| ||||| |||  |||||||| |||| ||||||||||| |||||||||||||||||||  ||  ||||||||  ||||||| |||||     
T  17527370 cttagatgatatgcgcgttgcttgatcaataagttaaggaaatattgtttacttaaacaataaagggcgcgtgtggaaacaggcgagaactcaagcacac 17527271  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    |||||||||||| ||| ||||  | ||||||||||||||||    
T  17527270 tgaaccgtgccaggatattggggcatcgtatccaacatctt 17527230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 12385261 - 12385173
Alignment:
Q  191 catgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
    ||||||| |||||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  12385261 catgaacccaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctaaaacatgttggaacattg 12385173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 17876347 - 17876236
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||| |||||||||||||||||||||||||||||||||||   |||| ||||||||| ||||||||||||||||| | || ||||| |||||||||||    
T  17876347 aaatatcgaaagtcctaaaatgtcggaacatctttaggatcgaacaaaaaaataacaaacatttcctaaaatataaatattactttagaaatattccaca 17876248  T
Q  101 actgattatgta 112  Q
    ||| ||| ||||    
T  17876247 actaattctgta 17876236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 138 - 286
Target Start/End: Original strand, 19168149 - 19168298
Alignment:
Q  138 aagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgta 237  Q
    |||||||| ||||||| ||||||||||||||||||  ||| |||||||  |||||||||| |||||||| | |||||||||| ||||||||| | |||||    
T  19168149 aagataaggaaatattatttccttaaacaataaagaacgcgcgtacaagtaggcatgaacccaggcacactaaaccgtgccaggatgttggagcatcgta 19168248  T
Q  238 tccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
     |||||||  || | |||||||| || |||||||||||||||| ||||||    
T  19168249 cccaacattctatagagatgcctaaacacatgttggaacattggttccaa 19168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 267
Target Start/End: Original strand, 19598426 - 19598513
Alignment:
Q  180 gtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacat 267  Q
    |||||||||||||||||   ||||||| ||||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  19598426 gtacaaacaggcatgaaacaaggcacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacagagatgcctgaaacat 19598513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 24542351 - 24542470
Alignment:
Q  132 gtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaac 231  Q
    |||||||||||||| |||||| ||||||||||| ||||   || ||  ||||||  |||||||||| |||||| | | ||||||||||  ||||||||||    
T  24542351 gtcaataagataaggaaatatggtttccttaaataatactaggtgcgtgtacaagtaggcatgaacccaggcatactaaaccgtgccagaatgttggaac 24542450  T
Q  232 gtcgtatccaacatcttaca 251  Q
     |||||||||||||| ||||    
T  24542451 atcgtatccaacatcataca 24542470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 34639600 - 34639555
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||    
T  34639600 aggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 34639555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 11992436 - 11992328
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctga-aacatgttggaacat 277  Q
    |||||| | |||||||||| |||||||| |||| ||||| | ||||||| ||| | ||||||||||||||||| || || || |  ||||||||||||||    
T  11992436 cgtacatataggcatgaacccaggcacactgaatcgtgctaggatgttgaaacattgtatccaacatcttacagagttgtctaaccacatgttggaacat 11992337  T
Q  278 tgattccaa 286  Q
    || ||||||    
T  11992336 tggttccaa 11992328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 28624579 - 28624627
Alignment:
Q  203 cacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||    
T  28624579 cacactgaaccgtgccaagatgttgaaacgtcgtatccaacatcataca 28624627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 19100669 - 19100727
Alignment:
Q  229 aacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||||||||||||||||||||| | |||||||| || |||||||||||| ||||||||||    
T  19100669 aacgtcgtatccaacatcttatagagatgcctaaacacatgttggaactttgattccaa 19100727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 28623168 - 28623134
Alignment:
Q  5 atggaaagtcctaaaatgtcggaacatctttagga 39  Q
    |||||||||||||||||||||||||||||||||||    
T  28623168 atggaaagtcctaaaatgtcggaacatctttagga 28623134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 25969918 - 25969982
Alignment:
Q  13 tcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaa 77  Q
    ||||||| ||||||||||| | |||||||||   ||||||||| |||||||| ||||||||||||    
T  25969918 tcctaaagtgtcggaacatttataggatcgttccaaacaataataaatatttactaaaatataaa 25969982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 25974358 - 25974422
Alignment:
Q  13 tcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaa 77  Q
    ||||||| ||||||||||| | |||||||||   ||||||||| |||||||| ||||||||||||    
T  25974358 tcctaaagtgtcggaacatttataggatcgttccaaacaataataaatatttactaaaatataaa 25974422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 17868340 - 17868275
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaaca 244  Q
    |||||||  |||||||||  |||||||| ||||||||| || ||||||||||| | ||||||||||    
T  17868340 cgtacaagtaggcatgaaaccaggcacactgaaccgtgtcacgatgttggaacattgtatccaaca 17868275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 17878123 - 17878058
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaaca 244  Q
    |||||||  |||||||||  |||||||| ||||||||| || ||||||||||| | ||||||||||    
T  17878123 cgtacaagtaggcatgaaaccaggcacactgaaccgtgtcacgatgttggaacattgtatccaaca 17878058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 18152152 - 18152107
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatc 246  Q
    |||||| ||||||||||||| ||||| |||| ||||||||||||||    
T  18152152 ggcacactgaaccgtgccaacatgttagaacatcgtatccaacatc 18152107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 19658684 - 19658761
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| |||| ||||| | ||||||||||| || ||||||||||||    || |||||| ||||||||||||||||    
T  19658684 aggcacactgaatcgtgctaggatgttggaacatcatatccaacatctcgtgaaaatgcctaaaacatgttggaacat 19658761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 30425650 - 30425691
Alignment:
Q  203 cacattgaaccgtgccaagatgttggaacgtcgtatccaaca 244  Q
    |||||||||| |||||||||||||||||| || |||||||||    
T  30425650 cacattgaactgtgccaagatgttggaacatcatatccaaca 30425691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 11961244 - 11961280
Alignment:
Q  210 aaccgtgccaagatgttggaacgtcgtatccaacatc 246  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  11961244 aaccgtgccaggatgttggaacatcgtatccaacatc 11961280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 20465286 - 20465230
Alignment:
Q  221 gatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaaca 276  Q
    ||||||||||| || |||||||||||||| | |||||||| || |||||||||||||    
T  20465286 gatgttggaacatcatatccaacatcttatagagatgcctaaacacatgttggaaca 20465230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 33977625 - 33977911
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||| ||||| |||| |||||||||||||||||    
T  33977625 aaatatgtaaagtcctaaaatgtcggaacatctctaggatcgtccaaatcaataacaaatttttcctaaaaaataaatactactttaggaatattccaca 33977724  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |||||||||||| || || |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  33977725 actgattctgtaaagatatgcgcattgcttgatcaataagataaggaaatattgtttccttaaacaataaagggcgcacgtacaaataggcatgaaccca 33977824  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | |||| ||||| ||| || ||||||||||| |  |||||||||||||||| |||||||| || |||||||||||||||| ||||||    
T  33977825 gacacactgaactgtgtcaggatgttggaacataatatccaacatcttacagagatgcctaaatacatgttggaacattggttccaa 33977911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 27925046 - 27924760
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||| |||||||||||  ||| ||||| |||||||||||    
T  27925046 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgttccaaccaataacaaatatttcataaaatataaaatctactttagaaatattccaca 27924947  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
      ||||| |||| ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||  |||||||  |||||||||| ||    
T  27924946 gttgattctgtatagatatgcgcgttgctttgtcaataagataaggaaatattgtttccttaaacaataaagagcgtgcgtacaagtaggcatgaaccca 27924847  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||| |||| || ||||||||||| || |||||||||||||||| | |||||| || |||||||||||||||| ||||||    
T  27924846 ggcacactgaatcgtgtcaggatgttggaacatcttatccaacatcttacagaaatgcctaaacacatgttggaacattggttccaa 27924760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 26536853 - 26537102
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||| ||||    
T  26536853 aaatatggaa-gtcctaaaatgtcggaacatctttagtatcgtccaaaacaataacaaatatttcataaaatataaatactactttaggaatatttcaca 26536951  T
Q  101 actgattat-gtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactc 199  Q
    ||||||| | ||||||||||| ||||| ||| |||||||||||||| ||||||||||||||||||| ||||  |||||||||||||| ||||||||||      
T  26536952 actgatttttgtaaagatatgcgcgttgcttggtcaataagataaggaaatattgtttccttaaaccataagtggcgcacgtacaaataggcatgaacct 26537051  T
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttac 250  Q
    || |||| |||||||||||| ||||||||||| || |||||||||||||||    
T  26537052 agacacactgaaccgtgccatgatgttggaacatcatatccaacatcttac 26537102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 35 - 286
Target Start/End: Original strand, 33962333 - 33962585
Alignment:
Q  35 taggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgattatgtaaagatatgtgcgttcctttgtc 134  Q
    |||||||||| ||| ||||||||||| |||||||||| ||||| |||| |||||||||||||||| ||||||| |||||||||||| ||||| |||  ||    
T  33962333 taggatcgtccaaatcaataacaaatttttcctaaaaaataaatactactttaggaatattccacgactgattctgtaaagatatgcgcgttgcttgatc 33962432  T
Q  135 aataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtc 234  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||| ||||| |||||| ||||||||||| |     
T  33962433 aataagataaggaaatattgtttccttaaacaataaagggcgcgcgtacaaagagacatgacctcaggcacactgaactgtgccaggatgttggaacata 33962532  T
Q  235 gtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
     |||||||||||||||| |||||||| || |||||||||||||||| ||||||    
T  33962533 atatccaacatcttacagagatgcctaaatacatgttggaacattggttccaa 33962585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 23541000 - 23540714
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||| |||||||| |||||| | |||||||||   || ||||||||||||||||||||||||||||  ||| ||||| |||||||||||    
T  23541000 aaatatggaaagtccaaaaatgtcagaacatttataggatcgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccaca 23540901  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| ||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||| |||||||  |||||| ||| ||    
T  23540900 gctgattcttagaagatatgcgcgttgcttaatcaataagataaggaaatattgtttccttaaacaataaagggcgcgcgtacaagtaggcataaaccca 23540801  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| | ||| |||||| ||||||||||| ||||||||| ||||||||| |||||||| || |||||||||||||||| ||||||    
T  23540800 ggcacactaaactgtgccaggatgttggaacatcgtatccatcatcttacagagatgcctaaacacatgttggaacattggttccaa 23540714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 45136677 - 45136962
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||||||||||| | |||||||||   || ||||||||||||||||||||||||||||   || ||||| |||||||||||    
T  45136677 aaatatggaaagtcctaaaatgtcggaacatttataggatcgttccaaccaataacaaatatttcctaaaatataaaatatactttagaaatattccaca 45136776  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |  ||||||||  || || |||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||  ||||| |||||||    
T  45136777 gctgattcttcaaagatatacgcattgctttgtcaataagataatgaaatattgtttccttaaacaataaagggcgcgc-tacaagtaggcaagaactca 45136875  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
     ||||| | ||||||| || ||||||||||| || |||||||||||| ||| |||| ||| || |||||||||||||||||||||||    
T  45136876 agcacactaaaccgtgtcaggatgttggaacatcatatccaacatctaacagagatacctaaacacatgttggaacattgattccaa 45136962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 22485699 - 22485941
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| |||||||||||    
T  22485699 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttctaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccaca 22485798  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |  || |||||| | ||| |||  |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||| |  |||||||    
T  22485799 gctgattcttaaatgatatgcgtgttgcttgatcaataagttaggaaaatattgtttccttaaacaataaagggcgcgcgtacaaacagacgagaactca 22485898  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaac 243  Q
    |||||| ||||| |||||| ||||||||| | |||||||||||    
T  22485899 ggcacactgaactgtgccaggatgttggagcatcgtatccaac 22485941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 277
Target Start/End: Original strand, 18622242 - 18622503
Alignment:
Q  3 atatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaac 102  Q
    ||||||||||||||||| ||| |||||||||||||||  ||| |||||||   ||||||||||||||||||||| |||   ||||| |||||| ||        
T  18622242 atatggaaagtcctaaagtgtaggaacatctttaggaatgtccaaaacaacttcaaatatttcctaaaatataatcacacctttagaaatattaca---- 18622337  T
Q  103 tgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcagg 202  Q
             |||||||||||||||  || |||||||||||||| ||||||  |||||||||| |||| |  |||| |||||| || |||| |||   |||    
T  18622338 ---------aaagatatgtgcgttgtttggtcaataagataaggaaatatgatttccttaaataatataaagcgcgcgtacacaccggcaagaaacaagg 18622428  T
Q  203 cacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||    
T  18622429 cacactgaaccgtgccaagatgttggaacatcgtatccaacatcttacagagatgtctgaaacatgttggaacat 18622503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 271
Target Start/End: Original strand, 9997161 - 9997332
Alignment:
Q  98 acaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaac 197  Q
    ||||||||||||||| ||||||| ||||| ||| ||||  |||||| |||||    ||||||||||  || ||| | ||| |||||||| |||||||||     
T  9997161 acaactgattatgtacagatatgcgcgttgcttggtcaccaagatatgaaaacgaggtttccttaat-aagaaaagacgcgcgtacaaataggcatgaaa 9997259  T
Q  198 tcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttg 271  Q
    ||||||||| ||||||||||||| ||| | |||| ||||||||||||||||||| | |||||| ||||||||||    
T  9997260 tcaggcacactgaaccgtgccaaaatg-tagaacatcgtatccaacatcttacagaaatgcctaaaacatgttg 9997332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 22476835 - 22476890
Alignment:
Q  133 tcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaaca 188  Q
    |||||||| || | ||||||||||||||||||||||||||||||| ||||||||||    
T  22476835 tcaataagttagggaaatattgtttccttaaacaataaagggcgcgcgtacaaaca 22476890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 20254271 - 20254194
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| ||||||||| || ||||||||||| || |||||||||| | |||   |||||| ||||||||||||||||    
T  20254271 aggcacactgaaccgtgtcaggatgttggaacatcatatccaacatttcacaggaatgcctaaaacatgttggaacat 20254194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22476746 - 22476788
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgt 43  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  22476746 aaatctggaaagtcctaaaatgtcggaacatttataggatcgt 22476788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 5e-87; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 24986549 - 24986835
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||| | || ||||| |||||||||||    
T  24986549 aaatatggaaagtcctaaaatgtcggaacatctttatgatcgttcaaaacaaaaacaaatatttcctaaaatataaatattactttagaaatattccaca 24986648  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| ||||  |||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| |||||| |     
T  24986649 actgattttgtatggatatgcgcgttgcttggtcaataagataagaaaatattgtttccttaaacaataaagggtgcacatacaaataggtatgaacacg 24986748  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | |||| ||||||||||||  |||||||||| | ||||||||||||||||| |||||||| || |||||||||||||||| ||||||    
T  24986749 gtcacactgaaccgtgccagaatgttggaacattgtatccaacatcttacagagatgcctaaacacatgttggaacattggttccaa 24986835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 11667496 - 11667210
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  11667496 aaatatggaaaatcctaaaatgttgtaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatactactttagaaatattccaca 11667397  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||| ||| |||||||||||| ||||| ||| |||||||||||||| ||||| | ||||||||||||||||||||  | |||||||| |||||||||| ||    
T  11667396 acttattctgtaaagatatgcgcgttgcttggtcaataagataaggaaatagtttttccttaaacaataaagggtccgcgtacaaataggcatgaaccca 11667297  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | |||| | ||| |||||| ||||||||||| ||||||||||||||||||| ||||| || || |||||||||||||||| ||||||    
T  11667296 gacacacttaactgtgccatgatgttggaacatcgtatccaacatcttacagagatgtctaaacacatgttggaacattggttccaa 11667210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 20840857 - 20840571
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||||||||||| | |||||||||   || ||||||||||||||||||||||||||||  ||| ||||| |||||||||||    
T  20840857 aaatatggaaagtcctaaaatgtcggaacatttataggatcgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccaca 20840758  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| | || ||||||| ||||| |||  ||||||||||||| ||||||| |||| ||||||||||||||||||  ||||||  ||||| |||||||    
T  20840757 actgattttttatagatatgcgcgttgcttgatcaataagataaggaaatattatttcattaaacaataaagggcgcgtgtacaagtaggcaagaactca 20840658  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| ||||| ||| || ||||||||||| ||||||||||||||||||| |||||||| || | |||||||||||||| ||||||    
T  20840657 ggcacactgaactgtgtcaggatgttggaacatcgtatccaacatcttacagagatgcctaaacatatgttggaacattggttccaa 20840571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 8 - 286
Target Start/End: Complemental strand, 20200673 - 20200396
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    |||||||||||||| | ||||||| | |||||||||   || ||||||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  20200673 gaaagtcctaaaatattggaacatttataggatcgttccaaccaataacaaatatttcctaaaatataaat-ctactttagaaatattccacaactgatt 20200575  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
       || ||||||| ||||| |||  ||||||||||| |||| |||||||||||||||||||||||||||| |||||||  ||| | | ||||||||| |     
T  20200574 ccttagagatatgcgcgttgcttgatcaataagataggaaa-tattgtttccttaaacaataaagggcgcgcgtacaagtaggaaagtactcaggcatac 20200476  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||||| ||||||    
T  20200475 tgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctaaacacatgttggaacattggttccaa 20200396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 23477528 - 23477253
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||| ||||| | ||||||||||||| |||| ||| |||   ||||||||||||||||||||| ||| | |||||||||||||||||    
T  23477528 aaatatggaaagtcctacaatgtagaaacatctttaggaacgtccaaatcaacttcaaatatttcctaaaatataatcacaactttaggaatattccaca 23477429  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    | ||||  ||||||||||||  |||| ||| |||||||||||||| |||| | ||||||||||| ||||   ||||  |||||||| ||||||  |  ||    
T  23477428 attgatcctgtaaagatatgcacgttgcttggtcaataagataaggaaatgtggtttccttaaataatattaggcg-gcgtacaaataggcatacaacca 23477330  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||||||||||||||||||||||||||| | |||| ||||||  ||||||||||||||||||||||||||||||    
T  23477329 ggcacattgaaccgtgccaagatgttggaacattgtattcaacattatacaaagatgcctgaaacatgttggaacat 23477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 13165960 - 13166246
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| ||||||||||||||  ||||||| || | |||||||||   ||||||||| |||||||||||||||||||||    | ||||| |||||||||||    
T  13165960 aaatctggaaagtcctaaagagtcggaagatttataggatcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccaca 13166059  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |   | |||||||||||| |||  |||||||| |||| ||||||||||||||||||||||||||||||| | |||| ||||||  |||||||    
T  13166060 actgattcttagatgatatgtgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcttacatacaggcgagaactca 13166159  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||| ||| ||||||| | | ||| |||||||||||| || ||| |||| || |||||||||||| ||| ||||||    
T  13166160 ggcacactgaaccgtaccaggatgttgaagcatcgcatccaacatcttccagagacgcctaaacacatgttggaactttggttccaa 13166246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 64 - 279
Target Start/End: Complemental strand, 17850957 - 17850742
Alignment:
Q  64 tcctaaaatataaacactagtttaggaatattccacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaa 163  Q
    ||||||||||||| |||   ||||||| |||| ||||||||||| |||||||||||| ||||| ||| |||||||||||||| |||||| ||||||||||    
T  17850957 tcctaaaatataatcacatctttaggagtattacacaactgattctgtaaagatatgggcgttgcttggtcaataagataaggaaatatggtttccttaa 17850858  T
Q  164 acaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa 263  Q
    | |||| |  ||||||| ||||||   |||||||| ||||||| |||||||||  | ||||||||||| | |||||||| |||||||||||||| |||||    
T  17850857 ataatataaagcgcacgcacaaactaacatgaactaaggcacactgaaccgtgttaggatgttggaacattgtatccaaaatcttacaaagatgactgaa 17850758  T
Q  264 acatgttggaacattg 279  Q
    ||||||||||||||||    
T  17850757 acatgttggaacattg 17850742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 26971989 - 26971744
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||| ||||||||||||||||| | |||||| ||   ||||||||  |||||||| ||||||||||||    | ||||| ||||||| |||    
T  26971989 aaatatggaaagttctaaaatgtcggaacatttataggatggttccaaacaatattaaatattttctaaaatataaaatacactttagaaatattcaaca 26971890  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| ||||| |||  |||||||| |||| |||||||||||||||||||||||||| ||||  ||||||| ||||  |||||||    
T  26971889 gctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagagcgc--gtacaaataggcgagaactca 26971792  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    |||||| |||||||||||| ||||||||| | ||||||||||||||||    
T  26971791 ggcacactgaaccgtgccaggatgttggagcatcgtatccaacatctt 26971744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 4246602 - 4246892
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||| ||||||||||||||||||||||||   || ||||||   || |||||| |||||||||||||||||||||  ||| ||||| |||||||||||    
T  4246602 aaatattgaaagtcctaaaatgtcggaacattcataagatcgttccaaccaataataaatatttcctaaaatataaaatctactttagaaatattccaca 4246701  T
Q  101 ac--tgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaact 198  Q
    ||  ||||| |   |||||||| | ||| |||  ||||||||||||| ||||||||||||||||||||||||||| | | |||||| ||||||  |||||    
T  4246702 acgctgattcttagaagatatgcgtgttgcttgatcaataagataaggaaatattgtttccttaaacaataaaggacacgcgtacatacaggcgagaact 4246801  T
Q  199 caggcacattgaaccgtgccaagatgttggaacgtc--gtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||||| | |||| ||||| |||||||||   ||  ||||||||||||||||| ||| | || || |||||||| ||||||| ||||||    
T  4246802 caggcacactaaaccatgccaggatgttggaggatcgtgtatccaacatcttacagagacgtctaaacacatgttgaaacattggttccaa 4246892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 251
Target Start/End: Complemental strand, 22891283 - 22891144
Alignment:
Q  112 aaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaa 211  Q
    ||||||||||| ||| ||| ||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||  ||||| ||||||||||||| ||||    
T  22891283 aaagatatgtgtgttgcttggtcaataagttaaggaaatattgtttccttaaacaataaaggacgcgcgtacaagtaggcaagaactcaggcacactgaa 22891184  T
Q  212 ccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||||||| ||||||||||| | |||||||||| ||||||    
T  22891183 ccgtgccaggatgttggaacatagtatccaacaacttaca 22891144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 15803730 - 15803541
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||| ||| ||||||||||| ||| |||||||| ||  ||| || |||    ||||||||||||||||||||| |||   ||||||||||||||| |    
T  15803730 aaatatgaaaaatcctaaaatgtaggatcatctttatgaatgtccaatacagcttcaaatatttcctaaaatataatcacatctttaggaatattccata 15803631  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacagg 190  Q
    ||||||| |||||||||||| || ||  || |||||||||||||| |||||| ||||||||||| |||||| ||||| | ||||||||||    
T  15803630 actgattctgtaaagatatgcgcattgtttggtcaataagataaggaaatatggtttccttaaataataaaaggcgcgcatacaaacagg 15803541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 12753723 - 12753871
Alignment:
Q  98 acaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaac 197  Q
    ||||||||||||||  ||||||| ||||| ||| |||||||||||||| |||||| ||||||||||| |||  | || || |||||||  ||||  ||||    
T  12753723 acaactgattatgtgcagatatgcgcgttgcttggtcaataagataaggaaatatggtttccttaaataattcaaggtgcgcgtacaagtaggctcgaac 12753822  T
Q  198 tcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatc 246  Q
     |||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  12753823 ccaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatc 12753871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 10339553 - 10339476
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||    
T  10339553 aggcacactgaaccgtgtcaagatgttggaacatcgtatccaacatcttacagaaatgcctaaaacatgttggaacat 10339476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 249
Target Start/End: Original strand, 9452117 - 9452220
Alignment:
Q  146 aaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||||| |||||||||||||||| |||||| |||||||  ||||  |||| |||||||| ||||| ||||||  |||||||| | |||||||||||||    
T  9452117 aaaatattatttccttaaacaataacgggcgcgcgtacaagtaggcgagaacccaggcacactgaactgtgccagaatgttggagcatcgtatccaacat 9452216  T
Q  246 ctta 249  Q
    ||||    
T  9452217 ctta 9452220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 97 - 279
Target Start/End: Original strand, 1626235 - 1626417
Alignment:
Q  97 cacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaa 196  Q
    ||||||||||| |||| ||||||| ||||| ||| ||||  |||||| |  ||  | ||||||||||| || | |  |||| |||||||  |||||||||    
T  1626235 cacaactgattttgtatagatatgcgcgttgcttggtcagcaagatatgggaaagtggtttccttaaaaaagataaagcgcgcgtacaagtaggcatgaa 1626334  T
Q  197 ctcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
      |||||||| ||||| || ||| ||||||||||| || |||||||||||||||| | |||| | ||||||||||||| ||||    
T  1626335 accaggcacactgaactgttccaggatgttggaacatcatatccaacatcttacagaaatgcataaaacatgttggaatattg 1626417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 25349625 - 25349544
Alignment:
Q  198 tcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
    ||||||||| |||||| ||||| ||||||||||  || |||||||||||||||| | |||||| ||||||||||||||||||    
T  25349625 tcaggcacactgaaccatgccaggatgttggaatatcatatccaacatcttacataaatgcctaaaacatgttggaacattg 25349544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 13150051 - 13150144
Alignment:
Q  194 gaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||||||||||||| |||||||||||| ||||||| | | ||| |||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  13150051 gaactcaggcacactgaaccgtgccaggatgttgaagcatcgcatccaacatcttccagagacgcctaaacacatgttgaaactttggttccaa 13150144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 22348016 - 22347972
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||    
T  22348016 ggcacactgaaccgtgccaagatgttagaacatcgtatccaacat 22347972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 51471484 - 51471433
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaa 252  Q
    |||||| |||||||||||| ||||||||||| || ||||||||||| |||||    
T  51471484 ggcacactgaaccgtgccaggatgttggaacttcatatccaacatcgtacaa 51471433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 8173 - 7886
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaac-aataacaaatatttcctaaaatataaacactagtttaggaatattccac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||| |||| ||||| | ||||||||    
T  8173 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccccaaccaataacaaatatttcctaaaatataaatactactttagaagtattccac 8074  T
Q  100 aactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactc 199  Q
    | |||||| | |||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||| |||  |||||||| |||||||||| |    
T  8073 agctgattctataaagatatgtgcgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagagcgggcgtacaaataggcatgaaccc 7974  T
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||||||| ||||| |||||  |||||| |||| |||||| |||||||||| | |||||| | || |||||||||||||||| ||||||    
T  7973 aggcacactgaacagtgccgggatgttcgaacatcgtatgcaacatcttatagagatgcttaaacacatgttggaacattggttccaa 7886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 7e-80; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 296007 - 296237
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | | ||||||||||||||||     
T  296007 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatgcaactttaggaatattccacc 296106  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |||||||||| | | ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||| ||    
T  296107 tctgattctgtaaagatacgcgtgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagggcgcacgtacaaatatgcatgaaccca 296206  T
Q  201 ggcacattgaaccgtgccaagatgttggaac 231  Q
    |||||| |||||||||||| ||| |||||||    
T  296207 ggcacactgaaccgtgccaggattttggaac 296237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 18063800 - 18063541
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||||| ||||||||||| | |||| |||||||||  ||||||||||||||||||||| |||| ||||| |||||||| ||    
T  18063800 aaatatggaaagtcctaaaatgtcgaaacatctttagaaacgtccaaaacaatattaaatatttcctaaaatataaatactactttagaaatattcctca 18063701  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |||| | ||||| | ||| ||| |||||||||||||| |||||||||||||||||||||| || |||||||||||| | ||||| ||||  |    
T  18063700 gctgattctgtagaaatatgcgtgttgcttggtcaataagataaggaaatattgtttccttaaacaatgaaaggcgcacgtacatataggcaagaaccaa 18063601  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcct 260  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18063600 ggcacactgaaccgtgccaggatgttggaacgtcgtatccaacatcttacaaagatgcct 18063541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 13515212 - 13514925
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||| |||||||||||| ||||| | |||||||||   || ||||||||||||||||||||||||||||  ||| ||| | |||||||||||    
T  13515212 aaatatggaaaggcctaaaatgtcgtaacatttataggatcgttccaaccaataacaaatatttcctaaaatataaaatctacttttgaaatattccaca 13515113  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatg-aactc 199  Q
    ||||||| |||| ||||||| ||||| |||  ||||||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||| | |||||    
T  13515112 actgattctgtatagatatgcgcgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagggcgcacgcacaagtaggcaagtaactc 13515013  T
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | ||||| |||||||||| | ||||||||||| ||||||||||||||||||| |||||| | || |||||||||||||||| ||||||    
T  13515012 aagcacactgaaccgtgctaggatgttggaacatcgtatccaacatcttacagagatgcttaaacacatgttggaacattggttccaa 13514925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 28051704 - 28051990
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaa----cactagtttaggaatattc 96  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||   |||||||||||||||||||| |    ||| | |||||||||||||    
T  28051704 aaatatggaaagtcctaaaatgtcggaacatctttaggagcgtccaaaacaacttcaaatatttcctaaaatatatataatcacaactttaggaatattc 28051803  T
Q  97 cacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaa 196  Q
    ||||||||||| |||||||||| | |||||  || ||||||| |||||| |||||||||||||||||  ||||   ||||| |||    | |||||| ||    
T  28051804 cacaactgattctgtaaagatacgcgcgttgtttggtcaataggataaggaaatattgtttccttaagtaatattaggcgcgcgt----ataggcataaa 28051899  T
Q  197 ctcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | || |||||   |||||||||| ||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||||| ||||||    
T  28051900 cgcatgcacacaaaaccgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctaaacacatgttggaacattggttccaa 28051990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 13791243 - 13791490
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| ||||||||||||||||||| |||||| | |||||| ||   ||||||||| ||||||||||||||||||||    || ||||| |||||||||||    
T  13791243 aaatctggaaagtcctaaaatgtcagaacatttataggattgttccaaacaataataaatatttcctaaaatataatatttactttagaaatattccaca 13791342  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |   ||||||||||||||  ||  ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  13791343 actgattcttagaagatatgtgcgttgtttgatcaataagataaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaactca 13791442  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    ||||||||||||| || || ||||||| | | | ||||||||||||||    
T  13791443 ggcacattgaaccatgtcaggatgttgaagcattgtatccaacatctt 13791490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 9 - 286
Target Start/End: Complemental strand, 18482958 - 18482680
Alignment:
Q  9 aaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatta 108  Q
    |||||||||||||||| |||||| | |||||||||   |||||| || |||||||||||||||||||||    | ||||| |||||||||||| |||||     
T  18482958 aaagtcctaaaatgtcagaacatttataggatcgttccaaacaagaataaatatttcctaaaatataaaatacactttagaaatattccacaattgattc 18482859  T
Q  109 tgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacatt 208  Q
    |   |||||||| ||||| |||  ||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||  |||||||| |||| |    
T  18482858 ttagaagatatgcgcgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagggtgcgcgtacaaacaggcgagaactcagacacact 18482759  T
Q  209 gaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||||| || ||||||| ||| ||||||||||||||||||| ||| |||| || |||| ||||||| ||| ||||||    
T  18482758 gaaccgtgtcaggatgttgaaacatcgtatccaacatcttacagagacgcctaaacacatattggaactttggttccaa 18482680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 7028664 - 7028378
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| ||||||| ||     
T  7028664 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaatataaaatatttcctaaaatataaaatacactttagaaatattctacg 7028565  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   | |||||| ||||| |||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||  |||||||    
T  7028564 gctgattctcagatgatatgcgcgttgcttgatcaataagataaggaaatattgtttccttaaataataaagggcgcacgtacaaataggcgagaactca 7028465  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | |||| ||||||||||||| |||||||| | |||||||||||||||| || ||| |||| || ||||||||| || ||| ||||||    
T  7028464 gtcacactgaaccgtgccaaaatgttggagcatcgtatccaacatcttccagagacgcctaaacacatgttggcactttggttccaa 7028378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 17135738 - 17135452
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||| ||||||||||||||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| |||||||||||    
T  17135738 aaatctggaaagttctaaaatgtcggaacatttataggatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccaca 17135639  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| ||||| |||  |||||||| |||| ||||||||||||||||||||||||| ||||| |||||| | ||||  |||||||    
T  17135638 gctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaaaggcgcgcgtacatagaggcgagaactca 17135539  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||||||  ||||||||||| ||||||||| | || ||||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  17135538 ggcacaccgaaccgtgccaggatgttggagcatcatatccaacatcttccagagacgcctaaacacatgttgaaactttggttccaa 17135452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 244
Target Start/End: Complemental strand, 21253586 - 21253347
Alignment:
Q  5 atggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactg 104  Q
    |||||||||| |||||| |  |||||||||||||| |||| ||||||    ||||||||||||||||||||| |||   |||||||||||| ||||||||    
T  21253586 atggaaagtcataaaatataagaacatctttaggaacgtccaaaacagcttcaaatatttcctaaaatataatcacatctttaggaatattacacaactg 21253487  T
Q  105 attatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggca 204  Q
    ||| |||||||||||| | ||| ||| |||||||||||||| |||||| | || |||||| |||| |  || | ||||||||||||||||||   |||||    
T  21253486 attctgtaaagatatgcgtgttgcttggtcaataagataaggaaatatgggtttcttaaataatataaagcacgcgtacaaacaggcatgaaacaaggca 21253387  T
Q  205 cattgaaccgtgccaagatgttggaacgtcgtatccaaca 244  Q
    || ||||||||| || ||||||||||| ||||||| ||||    
T  21253386 cactgaaccgtgtcaggatgttggaacatcgtatctaaca 21253347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 286
Target Start/End: Original strand, 24196099 - 24196377
Alignment:
Q  9 aaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatta 108  Q
    |||||||||||||||||||| || | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| ||||||||||| ||||||     
T  24196099 aaagtcctaaaatgtcggaatatttataggatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagctgattc 24196198  T
Q  109 tgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacatt 208  Q
    |   | |||||| ||||| |||  |||||||  |||| |||||||||||||||||||||||||||  || | |||||||||||  ||||||||||||| |    
T  24196199 ttagatgatatgcgcgttgcttgatcaataaattaaggaaatattgtttccttaaacaataaaggatgcgcatacaaacaggcgagaactcaggcacact 24196298  T
Q  209 gaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||||||||||| ||||||| | | ||| |||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  24196299 gaaccgtgccaggatgttgaagcatcgcatccaacatcttccagagacgcctaaacacatgttgaaactttggttccaa 24196377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 135 - 286
Target Start/End: Complemental strand, 20627102 - 20626950
Alignment:
Q  135 aataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtc 234  Q
    ||||||||||| |||||||||||||||||||||||||||||| || |||||  |||||||||| ||| |||| | |||||||||| ||||||||||| |     
T  20627102 aataagataaggaaatattgtttccttaaacaataaagggcgtacatacaagtaggcatgaacccagacacactaaaccgtgccaggatgttggaacatt 20627003  T
Q  235 gtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||||| |||||||| |||||||| || |||||||||||||||||||||||    
T  20627002 gtatccaatatcttacagagatgcctaaacacatgttggaacattgattccaa 20626950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 23954151 - 23953923
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | ||| |||||   ||||||||  |||||||||||||||||||||    | ||||| |||||||||||    
T  23954151 aaatctggaaagtcctaaaatgtcggaacatttatagtatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccaca 23954052  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   | || ||| |||||  ||  |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||| ||  |||||||    
T  23954051 gctgattcttagatgacatgcgcgttgtttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcacgtataaacaagcgagaactca 23953952  T
Q  201 ggcacattgaaccgtgccaagatgttgga 229  Q
    |||||| |||||||||| | |||||||||    
T  23953951 ggcacactgaaccgtgctaggatgttgga 23953923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 260
Target Start/End: Complemental strand, 15572588 - 15572337
Alignment:
Q  9 aaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatta 108  Q
    |||||| |||||||||||||||| | |||||||||   ||||||||| |||||||||||||||||||||    | ||| | |||||||||||  |||||     
T  15572588 aaagtcttaaaatgtcggaacatttataggatcgttccaaacaataataaatatttcctaaaatataaaatacacttttgaaatattccacagatgattc 15572489  T
Q  109 tgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacatt 208  Q
    |   |||||||  |||||  ||  ||||||||||||| |||||||||||||||||||||||||||| |  |||||||| || |   |||||||||||| |    
T  15572488 ttagaagatatacgcgttggttgatcaataagataaggaaatattgtttccttaaacaataaagggtgtgcgtacaaatagccgataactcaggcacact 15572389  T
Q  209 gaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcct 260  Q
    ||||| |||||| ||||| || ||| ||||||||||||||||| ||| ||||    
T  15572388 gaaccttgccaacatgttagagcgttgtatccaacatcttacagagacgcct 15572337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 18548214 - 18548416
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| |  ||||||||   ||||||||| ||||||||||||||||||||   ||| ||||| |||||||||||    
T  18548214 aaatctggaaagtcctaaaatgtcggaacatttacaggatcgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccaca 18548313  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
      ||||| |  |||||||||| |||| |||  ||||||||||||| ||||||||| ||||||||| |||||| |||||| |||||| ||||  |||||||    
T  18548314 gttgattcttaaaagatatgtccgttgcttgatcaataagataaggaaatattgtgtccttaaac-ataaagagcgcacatacaaataggcgagaactca 18548412  T
Q  201 ggca 204  Q
    ||||    
T  18548413 ggca 18548416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 1918837 - 1918590
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||| ||| | ||||| | |   ||||||||  |||||||||||||||||||||    | ||||  ||||||| |||    
T  1918837 aaatctggaaagtcctaaaatgtcggagcatttataggacccttccaaacaatattaaatatttcctaaaatataaaatacactttaaaaatattctaca 1918738  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||  ||| |   | |||||| ||||| |||  |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||  |||||||    
T  1918737 acgaattcttagatgatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcacgtacaaacatgcgagaactca 1918638  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    |||||| |||||||||| | ||||||| | | ||| || |||||||||    
T  1918637 ggcacactgaaccgtgctaggatgttgaagcatcgcatacaacatctt 1918590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 19634446 - 19634692
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | ||| ||| |   ||||||||| ||||||||||||||||||||   ||| ||||| |||||||||||    
T  19634446 aaatctggaaagtcctaaaatgtcggaacatttatagaatcattccaaacaataataaatatttcctaaaatataatatctactttagaaatattccaca 19634545  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaa-caggcatgaactc 199  Q
     |||||| |   ||||||   ||||| |||  ||| |||| |||| |||||||||||||  ||||||||| ||||||||||||||| ||||   ||||||    
T  19634546 gctgattcttagaagata--cgcgttgcttgatcagtaagttaaggaaatattgtttccgaaaacaataacgggcgcacgtacaaaccaggtgagaactc 19634643  T
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    ||||||| |||||||||||| | ||||||| | || |||||| ||||||    
T  19634644 aggcacactgaaccgtgccaggttgttggagcatcatatccagcatctt 19634692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 286315 - 286217
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    |||||||||| |||||||   || |||| |||||||||| | ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  286315 cgtacaaacatgcatgaaacaagacacactgaaccgtgctaggatgttggaacatcgtatccaacatcttacagagatgcctgaaacatgttggaacat 286217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 251
Target Start/End: Complemental strand, 17042341 - 17042103
Alignment:
Q  7 ggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaact-ga 105  Q
    |||||||||||||| || ||||||||||||||| | || |||  |||  |||||  |||||||||||| | || |  |||||||||| |  |  ||| ||    
T  17042341 ggaaagtcctaaaaagtaggaacatctttaggaacttccaaacaaatc-caaatgattcctaaaatattaccaatcttttaggaataataaaacacttga 17042243  T
Q  106 ttatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcac 205  Q
    ||||||| |||||||  | || ||| |||||||||||||| |||||| ||||||||||| |||| | |||||  |||      ||||||||| |||||||    
T  17042242 ttatgtacagatatgcacattgcttggtcaataagataaggaaatatggtttccttaaataatataaggcgcgtgta------ggcatgaacccaggcac 17042149  T
Q  206 attgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    | |||||||||||| ||||| ||||| |||||||||||||| ||||    
T  17042148 actgaaccgtgccaggatgtcggaacatcgtatccaacatcataca 17042103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 6578964 - 6578871
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttgg 272  Q
    |||||||| ||| |||||  ||| |||| ||||||||| || ||||||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  6578964 cgtacaaataggtatgaaaccagacacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacagaaatgcctaaaacatgttgg 6578871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 21547528 - 21547635
Alignment:
Q  180 gtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacatt 278  Q
    ||||||| || ||||||||||| |||| ||||| ||| || || |||||||| ||||||||||||||||| | |||||| | || |||||||||||||||    
T  21547528 gtacaaaaagacatgaactcagacacactgaactgtgtcaggaagttggaacatcgtatccaacatcttatagagatgcataaacacatgttggaacatt 21547627  T
Q  279 gattccaa 286  Q
    | ||||||    
T  21547628 ggttccaa 21547635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 979775 - 979698
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| ||||||||||| |||||||||||| || |||||||||||||||| | || ||| ||| ||||||||||||    
T  979775 aggcacactgaaccgtgccgagatgttggaacatcatatccaacatcttacagaaatacctaaaatatgttggaacat 979698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 31650450 - 31650501
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaa 252  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  31650450 ggcacactgaacggtgccaagatgttggaacgtcgtatccaacatcatacaa 31650501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 214486 - 214438
Alignment:
Q  203 cacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  214486 cacactgaaccgtgccaagatgttggaacatcgtatccaacatcataca 214438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 8225849 - 8225893
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  8225849 ggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 8225893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 18477860 - 18477904
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  18477860 ggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 18477904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 44453056 - 44453124
Alignment:
Q  9 aaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaa 77  Q
    ||||||||||||||||||||||| | |||||| ||   || |||||| |||||||||||||||||||||    
T  44453056 aaagtcctaaaatgtcggaacatttataggattgttccaaccaataataaatatttcctaaaatataaa 44453124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 3551873 - 3551822
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    ||||||| |||||||||||| ||||||||||| || ||||||||||||||||    
T  3551873 aggcacactgaaccgtgccacgatgttggaacatcatatccaacatcttaca 3551822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 15674231 - 15674181
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||||| ||||| ||||||||||||||| || |||||||||||||||||||    
T  15674231 ggcacactgaactgtgccaagatgttgggacatcgtatccaacatcttaca 15674181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 25020161 - 25020212
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    ||||||| | ||||||| |||||||||||||| |||||||||||||| ||||    
T  25020161 aggcacactaaaccgtggcaagatgttggaacatcgtatccaacatcataca 25020212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 11657072 - 11657109
Alignment:
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  11657072 tgaaccgtgtcaagatgttggaacatcgtatccaacat 11657109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 149; Significance: 1e-78; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 7131 - 6846
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||   || |||||||||||||||||||||||||||| |||| ||||| ||||||||| |    
T  7131 aaatatggaaagtcctaaaatgttggaacatctttaggatcgttccaaccaataacaaatatttcctaaaatataaatactactttagaaatattccaga 7032  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| ||||||| ||||  |||| ||| |||||||||| ||| ||||||| ||||||||||||||||||||||  |||||||| |||||||||| ||    
T  7031 actgattttgtaaagctatgcccgttgcttggtcaataagaaaaggaaatattatttccttaaacaataaagggcg--cgtacaaataggcatgaaccca 6934  T
Q  201 ggcacattgaaccgtgccaa-gatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | |||| ||||||||||||| ||||||||||| || ||||||| |||||||||||||| || || |||||||||||||||| ||||||    
T  6933 gacacactgaaccgtgccaaggatgttggaacatcatatccaaaatcttacaaagatggctaaacacatgttggaacattggttccaa 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 17718 - 17432
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |   || |||||| ||||||||||||||||||||| |||| ||||| ||||||||| |    
T  17718 aaatatgaaaagtcctaaaatgttggaacatctttaggatcattccaaccaataaaaaatatttcctaaaatataaatactactttagaaatattccata 17619  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |||||||||||| |||||  || || ||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  17618 gctgattctgtaaagatatgcgcgttagttggttaataagataaggaaatattgtttccttaaacaataaagggcgcacatacaaatatgcatgaactca 17519  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||||  | ||||||||||| || |||| ||||||||||| |||| ||| || |||||||||||||||| ||||||    
T  17518 ggcacactgaaccgtggtaggatgttggaacatcatatctaacatcttacagagatacctaaacacatgttggaacattggttccaa 17432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 27112 - 26826
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||| ||||||||||||||| ||||||||||||||||| |   || |||||| ||||||||||||||||||||| |||| ||||| ||||||||| |    
T  27112 aaatatgaaaagtcctaaaatgttggaacatctttaggatcattccaaccaataaaaaatatttcctaaaatataaatactactttagaaatattccata 27013  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |||||||||||| |||||  || || ||||||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||    
T  27012 gctgattctgtaaagatatgcgcgttagttggttaataagataaggaaatattgtttccttaaacaataaagggcgcacatacaaatatgcatgaactca 26913  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||||  | ||||||||||| || |||| ||||||||||| |||| ||| || |||||||||||||||| ||||||    
T  26912 ggcacactgaaccgtggtaggatgttggaacatcatatctaacatcttacagagatacctaaacacatgttggaacattggttccaa 26826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 16919 - 16640
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||||||||||  ||| ||||| ||||||||||     
T  16919 aaatatgaaaagtcctaaaatgtcggaacatctttaggatcgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccacc 16820  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |||| ||||||| |||||  || ||||||||| |||| || |||||||||||||||||||||||||| | | |||||  | ||||||| |||    
T  16819 gctgattctgtatagatatgcgcgttgtttggtcaataagttaaggaattattgtttccttaaacaataaagggcacgcttacaagtatgcatgaaatca 16720  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattg 279  Q
    |||||| |||||| || || |||||| || | |||||||||||||||||||||||||||| || |||||||| |||||||    
T  16719 ggcacactgaaccatgtcaggatgttagatcatcgtatccaacatcttacaaagatgcctaaacacatgttgaaacattg 16640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 16214 - 15957
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||| ||| | |||||||||||||||||||||||||   || ||||||||||||||| |||||||||||   ||| ||||| ||||||| |||    
T  16214 aaatatggaaaatcccagaatgtcggaacatctttaggatcgttccaaccaataacaaatattttctaaaatataatatctactttagaaatattcaaca 16115  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |||| ||||||| || || ||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||  ||| |||||| ||    
T  16114 tctgattctgtatagatatgcgcattgcttggtcaataagataatgaaatattgtttccttaaacaataaagagcgcacgtacaagtaggaatgaaccca 16015  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgc 258  Q
    ||||||  ||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  16014 ggcacaccgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagatgc 15957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 9e-64; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 15162077 - 15161866
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||||||  |||||||||||   ||  || |||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  15162077 aaatatggaaagtcctaaaatgtcgggtcatctttaggaatctcccaaccaataacaaatatttcctaaaatataaatactactttagaaatattccaca 15161978  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||| ||||| ||    
T  15161977 gctgattctgtaaagatatgtgcgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagggcgcgtgtacaaataggcttgaaccca 15161878  T
Q  201 ggcacattgaac 212  Q
    |||||| |||||    
T  15161877 ggcacactgaac 15161866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 18601253 - 18600967
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||||||||||| | ||||||||| | |||| |||| |||||||||||||| ||||||    | ||||| |||||| ||||    
T  18601253 aaatatggaaagtcctaaaatgtcggaacatttataggatcgtttcaaactataataaatatttcctaaagtataaaatacactttagaaatatttcaca 18601154  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| ||||| |||  |||||||| |||| ||||||||||||||||||||||||||||||||| ||||| |||||  |||||||    
T  18601153 gctgattcttagaagatatgcgcgttgcttgatcaataagttaagtaaatattgtttccttaaacaataaagggcgcacatacaaccaggcgagaactca 18601054  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||||||| ||||||||| | |||||||||||||||| || ||| |||| || |||||||| ||||||| ||||||    
T  18601053 ggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttccacagacgcctaaacacatgttgaaacattggttccaa 18600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 19183277 - 19182997
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||| ||||||||||||||| |||  |||||||||| | || |||||||   ||||||||| ||||||||| | |||   |||||||||||| ||||    
T  19183277 aaatatgtaaagtcctaaaatgtaggaggatctttaggaacatccaaaacaacttcaaatattttctaaaatatgatcacatctttaggaatattacaca 19183178  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| || |||||||||||||||  || ||||| |||||||| |||||| ||||||||||| ||||||| ||||  ||||||| |||||||||||||    
T  19183177 actgattctgaaaagatatgtgcgttgtttggtcaagaagataaggaaatatggtttccttaaataataaagagcgcgtgtacaaataggcatgaactca 19183078  T
Q  201 --ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
       ||||| |||||||||||| |||||  |||| ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  19183077 tgcgcacactgaaccgtgccaggatgtcagaacatcgtatccaacatcttacagagatgcctaaaacatgttggaacattg 19182997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 33898602 - 33898316
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||| |||||||||||||||||||||    | ||||| |||||||||||    
T  33898602 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccaca 33898503  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| ||||| |||  |||||||| |||| ||||||||||||||||||||||||||||||| |||||| ||||||  |||| ||    
T  33898502 gctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacatacaggcgagaacgca 33898403  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||| | |||||||| | | ||||||||| | ||||||| |||||||| |||||| |||| || |||||||| ||||||| ||||||    
T  33898402 ggcatactgaaccgtacgaggatgttggagcatcgtatctaacatcttccaaagacgcctaaacacatgttgaaacattggttccaa 33898316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 16384456 - 16384735
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| ||| |||||||||||||| ||||||| | |||||||||   ||||||||| |||||||||||||||||||||    | ||||| |||||||||||    
T  16384456 aaatttgggaagtcctaaaatgttggaacatttataggatcgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccaca 16384555  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |   |||||||| | |||  ||  |||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||  |||| ||    
T  16384556 actgattcttagaagatatgcgtgttgtttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaaccca 16384655  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattg 279  Q
    |||||| ||||| ||| || ||||||||| | |||||||||||||||| || ||| |||| || ||||||||||||||||    
T  16384656 ggcacactgaactgtgtcaggatgttggagcatcgtatccaacatcttccagagacgcctaaacacatgttggaacattg 16384735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 15699929 - 15699651
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||   ||||||||||||||||||| ||||| | ||||||||||||||| |    
T  15699929 aaatatggaaagtcctaaaatgtaggaacatctttaggagcgtccaaaacaacttcaaatatttcctaaaatatgaacacaactttaggaatattccaaa 15699830  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     ||||||   |||||||||| | ||| ||| |||||||||||||||| |||| ||||||||| | |||| | |||||  |||| |||| ||| ||         
T  15699829 gctgattcattaaagatatgcgtgtttcttggtcaataagataagaatatatggtttccttatataatatatggcgcgtgtactaacatgcaagatacat 15699730  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
    |||||| ||||| |||||| ||||||||||| ||| |||||||||||||   | |||| |||| |||||||||||||||    
T  15699729 ggcacactgaactgtgccaggatgttggaacatcggatccaacatcttatggacatgcttgaaccatgttggaacattg 15699651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 23399789 - 23399503
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| ||||||||||||||||||| |||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| ||||||| |||    
T  23399789 aaatttggaaagtcctaaaatgtcagaacatttataggatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattctaca 23399690  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |  ||||||||||| |||  |||||||| |||| |||||||||||||||||| |||||||||||| |||||||||| ||  |||||||    
T  23399689 gctgattcttagataatatgtgcgttgcttgatcaataagttaaggaaatattgtttccttaaataataaagggcgcgcgtacaaacaagcgagaactca 23399590  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| | |||||||||| ||||||| | | ||| |||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  23399589 ggcacactaaaccgtgccaggatgttgaagcatcgcatccaacatcttccagagacgcctaaacacatgttgaaactttggttccaa 23399503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 25117422 - 25117708
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||| ||||  || |||||| |||||||||||    | ||||| ||||||||| |    
T  25117422 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaaaaatattaagtatttcttaaaatataaaatacactttagaaatattccaaa 25117521  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     | |||| |   | ||||||   ||| |||  |||||||| |||| |||||||||||||||||||||||||| |||| |||||||| ||||  |||||||    
T  25117522 gccgattcttagatgatatgaatgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagagcgcgcgtacaaataggcgagaactca 25117621  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
     |||   |||| ||||||| ||||||||| | |||||||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  25117622 tgcaacctgaagcgtgccaggatgttggagcatcgtatccaacatcttccagagacgcctaaatacatgttgaaactttggttccaa 25117708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 286
Target Start/End: Original strand, 28019877 - 28020155
Alignment:
Q  9 aaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatta 108  Q
    ||||||||||||||||||||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| ||||||  | | ||||||     
T  28019877 aaagtcctaaaatgtcggaacatttataggatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattttatagctgattc 28019976  T
Q  109 tgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacatt 208  Q
    |   | ||||||  |||| |||  |||||||| |||  ||||||| ||||||||||||||||||||| | || ||||||| |   |||||||  |||| |    
T  28019977 ttagatgatatgcacgttgcttgatcaataagttaaagaaatattatttccttaaacaataaagggctcgcgaacaaacatgtgagaactcattcacact 28020076  T
Q  209 gaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||||||||||| ||||||| | | ||  |||||||||||| || ||| |||| || |||||||| ||| ||||||||||    
T  28020077 gaaccgtgccaggatgttgaagcatcacatccaacatcttccagagacgcctaaacacatgttgaaactttgattccaa 28020155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 9069689 - 9069783
Alignment:
Q  180 gtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaa 274  Q
    ||||||| ||||||||| ||||||||| |||||||| ||| ||||||||||| ||||||||||||||||||| | |||||  |||||||||||||    
T  9069689 gtacaaataggcatgaaatcaggcacactgaaccgttccaggatgttggaacatcgtatccaacatcttacagaaatgccgaaaacatgttggaa 9069783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 251
Target Start/End: Original strand, 33746588 - 33746736
Alignment:
Q  105 attatgtaaagatatgtgcgttc-ctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggc 203  Q
    |||||||| ||||||| |||||  ||| |||| ||||||||| |||||| ||||||||||| |||| | ||||| | |||||  |||||||||| ||| |    
T  33746588 attatgtacagatatgcgcgtttgcttggtcagtaagataaggaaatatggtttccttaaataatacaaggcgcgcatacaagtaggcatgaacccagac 33746687  T
Q  204 aca-ttgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    ||| |||||||| |||| |||||| |||| |||||||||||||| ||||    
T  33746688 acacttgaaccgcgccaggatgttagaacatcgtatccaacatcataca 33746736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 286
Target Start/End: Original strand, 10724939 - 10725049
Alignment:
Q  176 gcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcct-gaaacatgttggaa 274  Q
    ||||||||||| |||||||||| || ||||| | ||| |||||| ||||||||||| ||||||||||||||||||| ||||||||  | | |||||||||    
T  10724939 gcacgtacaaataggcatgaac-caagcacactaaactgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctacacatatgttggaa 10725037  T
Q  275 cattgattccaa 286  Q
    ||||| ||||||    
T  10725038 cattggttccaa 10725049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 286
Target Start/End: Original strand, 10938708 - 10938818
Alignment:
Q  176 gcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcct-gaaacatgttggaa 274  Q
    ||||||||||| |||||||||| || ||||| | ||| |||||| ||||||||||| ||||||||||||||||||| ||||||||  | | |||||||||    
T  10938708 gcacgtacaaataggcatgaac-caagcacactaaactgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctacacatatgttggaa 10938806  T
Q  275 cattgattccaa 286  Q
    ||||| ||||||    
T  10938807 cattggttccaa 10938818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 10724828 - 10724939
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||         ||| |||||||||||||||||||| |||| |||| |||||||| |||    
T  10724828 aaatatggaaagtcctaaaatgtcagaacatctttaggatcatc-------ccaaccaatatttcctaaaatataaatactacttta-gaatattcaaca 10724919  T
Q  101 actgattatgtaaagatatg 120  Q
     |||||| ||||||||||||    
T  10724920 gctgattctgtaaagatatg 10724939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 10938597 - 10938708
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||||||||||||||||||||| |||||||||||||||| ||         ||| |||||||||||||||||||| |||| |||| |||||||| |||    
T  10938597 aaatatggaaagtcctaaaatgtcagaacatctttaggatcatc-------ccaaccaatatttcctaaaatataaatactacttta-gaatattcaaca 10938688  T
Q  101 actgattatgtaaagatatg 120  Q
     |||||| ||||||||||||    
T  10938689 gctgattctgtaaagatatg 10938708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 15623211 - 15623274
Alignment:
Q  210 aaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttgga 273  Q
    |||||||||| ||||||||||| ||||||||||||||||||| | |||||| ||||||||||||    
T  15623211 aaccgtgccaggatgttggaacatcgtatccaacatcttacagaaatgcctaaaacatgttgga 15623274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 19660160 - 19660257
Alignment:
Q  179 cgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    |||||||| ||||||||||||||||||| |||||| ||||| ||||||||||| |  ||||||| |||| | |  ||||||| || |||||||||||||    
T  19660160 cgtacaaataggcatgaactcaggcacactgaaccatgccacgatgttggaacattctatccaa-atctcatatggatgcctaaaccatgttggaacat 19660257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 10683013 - 10683057
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  10683013 ggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 10683057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 10896653 - 10896697
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  10896653 ggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 10896697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 15161864 - 15161810
Alignment:
Q  233 tcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    ||||||||||||||||||| |||||||| || |||||||||||||||| ||||||    
T  15161864 tcgtatccaacatcttacagagatgcctaaacacatgttggaacattggttccaa 15161810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 10197641 - 10197596
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatc 246  Q
    |||||| |||||||||||||||||||||||| || |||||||||||    
T  10197641 ggcacactgaaccgtgccaagatgttggaacatcatatccaacatc 10197596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 10723060 - 10723097
Alignment:
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10723060 tgaaccgtgccaagatgttggaacatcgtatccaacat 10723097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 10936829 - 10936866
Alignment:
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10936829 tgaaccgtgccaagatgttggaacatcgtatccaacat 10936866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 10718241 - 10718285
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||    
T  10718241 ggcacactgaaccgtgccaggatgttggaacatcgtatccaacat 10718285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 10932010 - 10932054
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||    
T  10932010 ggcacactgaaccgtgccaggatgttggaacatcgtatccaacat 10932054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 33744168 - 33744287
Alignment:
Q  132 gtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaac 231  Q
    |||| ||||||||  |||||| ||||||||||| |||| | ||| | |||| |   |||||||||| ||| || | |||||||||| | |||||||||||    
T  33744168 gtcagtaagataaagaaatatggtttccttaaataatacaaggcacgcgtaaatgtaggcatgaacccagacagactgaaccgtgctaggatgttggaac 33744267  T
Q  232 gtcgtatccaacatcttaca 251  Q
     || ||||||||||| ||||    
T  33744268 atcttatccaacatcataca 33744287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 32862409 - 32862486
Alignment:
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||| ||||||||  || ||||||||||| || ||||||||||||   ||| |||| | ||||||||||||||||    
T  32862409 aggcacactgaaccgtatcaggatgttggaacatcatatccaacatctcgtaaaaatgcataaaacatgttggaacat 32862486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 41786206 - 41786246
Alignment:
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    |||||||||||| ||||||||||| || |||||||||||||    
T  41786206 tgaaccgtgccaggatgttggaacatcatatccaacatctt 41786246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 49975014 - 49975058
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| |||| ||||||| ||||||||||| |||||||||||||    
T  49975014 ggcacactgaatcgtgccaggatgttggaacatcgtatccaacat 49975058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 6e-62; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 21530944 - 21531220
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||||| ||||||| |||||||| |||||||||| |||| |||||| ||||    ||||||||| |||||||||||||||   |||||||||||| ||||    
T  21530944 aaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataacagattcaaatattttctaaaatataaacacatctttaggaatattgcaca 21531043  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||| |||| | |||||   ||| ||| |||||||||||||| |||||| ||||||||||| |||||| ||||| ||||||||||||||||||   |    
T  21531044 actgattttgtatatatatgcatgttacttggtcaataagataaggaaatatggtttccttaaataataaaaggcgcgcgtacaaacaggcatgaaacaa 21531143  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    ||||||  ||||| | ||| ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  21531144 ggcacaccgaaccataccaggatgttggaacattgtatccaacatcttacagagatgcctgaaacatgttggaacat 21531220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 24789752 - 24789493
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||| ||||||||||||||||    | ||||| |||||||||||    
T  24789752 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaatattaaatttttcctaaaatataaaatacactttagtaatattccaca 24789653  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   | |||| |  |||| ||| ||||||||  |||| ||||||  ||||||||||||||||||||||| |||||||||||||  |||||||    
T  24789652 gctgattcttagatgataagcacgttgcttggtcaataaattaaggaaatatattttccttaaacaataaagggcgcgcgtacaaacaggcgagaactca 24789553  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcct 260  Q
    |||||| |||||||||||| ||||||||| | |||||||||||||||| || ||||||||    
T  24789552 ggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttccagagatgcct 24789493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 15328891 - 15329171
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||| || |||||||| |||| |||||||||  |||| |||||||   ||||||||| |||||||| |||||| | ||||||||||||    |    
T  15328891 aaatatggaaaatcttaaaatgtaggaatatctttaggggcgtccaaaacaacttcaaatattttctaaaatacaaacacaactttaggaatatt----a 15328986  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    ||||||  ||||  |||||| ||||| ||| |||||||||||||| |||||||||||||||||| | |  | || || |||||||||||||| ||         
T  15328987 actgatcttgtagtgatatgcgcgttgcttagtcaataagataaggaaatattgtttccttaaatagttta-ggtgcgcgtacaaacaggcaagatacat 15329085  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattgattccaa 286  Q
    ||||||  ||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||| ||||||    
T  15329086 ggcacacagaaccgtgccaggatgttggaacatcgtatccaacatcttacagacatgcctgaatcatgttggaacattggttccaa 15329171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 22611457 - 22611684
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | || ||||||   ||||||||  |||||||||||||||||||||    | ||||| ||||||||| |    
T  22611457 aaatttggaaagtcctaaaatgtcggaacatttataagatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccata 22611556  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| ||||| |||  |||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  22611557 gctgattcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaactca 22611656  T
Q  201 ggcacattgaaccgtgccaagatgttgg 228  Q
    | |||| ||||||||| || ||||||||    
T  22611657 gtcacactgaaccgtgtcaggatgttgg 22611684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 8 - 260
Target Start/End: Original strand, 23759197 - 23759449
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    |||||||||||||||| ||||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| ||||||| ||||||||||    
T  23759197 gaaagtcctaaaatgttggaacatttataggatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattctacaactgatt 23759296  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
     |   | ||||||  |||| |||  |||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||    ||||||||||||||    
T  23759297 cttatatgatatgcacgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacagttgagaactcaggcacat 23759396  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcct 260  Q
    ||||||||| || ||||||| | | ||  |||||||||||| |||||| ||||    
T  23759397 tgaaccgtgacaggatgttgaagcatcacatccaacatcttccaaagacgcct 23759449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 12911058 - 12911344
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataa-acactagtttaggaatattccac 99  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||| |||||||||||||||||||| | || | ||||| |||||| |||    
T  12911058 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaataataaatatttcctaaaatataagatac-actttagaaatatttcac 12911156  T
Q  100 aactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactc 199  Q
    | |||||| |   | |||| | ||||| |||  |||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||| ||  ||||||    
T  12911157 agctgattcttagatgatacgcgcgttgcttgatcaataagttaaggaaatattatttccttaaacaataaagggcgcgcgtacaaacaagcgagaactc 12911256  T
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    || |||| ||||||||| ||  |||||| | | |||||||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  12911257 agacacactgaaccgtgtcagaatgttgaagcatcgtatccaacatcttccagagacgcctaaacacatgttgaaactttggttccaa 12911344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 21249612 - 21249515
Alignment:
Q  180 gtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacat 277  Q
    |||||| ||||||||||   ||||||| | |||||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  21249612 gtacaatcaggcatgaaacaaggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttacagaaatgcctgaaacatgttggaacat 21249515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 27111798 - 27111843
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatc 246  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  27111798 ggcacattgaaccgtgccaggatgttggaacatcgtatccaacatc 27111843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 36397883 - 36397839
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacat 245  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  36397883 ggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 36397839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 27108209 - 27108254
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatc 246  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||    
T  27108209 ggcacactgaaccgtgccaggatgttggaacatcgtatccaacatc 27108254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 24311246 - 24311196
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||||| |||||||||||| ||||||||||| | |||||||||||| ||||    
T  24311246 ggcacactgaaccgtgccaggatgttggaacattgtatccaacatcataca 24311196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 24313038 - 24312988
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    ||||||||||||||||||| ||| ||||||| | |||||||||||| ||||    
T  24313038 ggcacattgaaccgtgccaggatattggaacattgtatccaacatcataca 24312988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 26859383 - 26859346
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtat 238  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  26859383 ggcacaatgaaccgtgccaagatgttggaacatcgtat 26859346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 279
Target Start/End: Complemental strand, 1954 - 1682
Alignment:
Q  8 gaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgatt 107  Q
    |||||||||||||||||||||||| | |||||||||   ||||||||| |||||||||| ||||||||||    | ||||  ||||||||||| ||||||    
T  1954 gaaagtcctaaaatgtcggaacatttataggatcgttccaaacaataataaatatttccaaaaatataaaatacactttataaatattccacagctgatt 1855  T
Q  108 atgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacat 207  Q
     |   |||||||| |||||  ||  |||||||| |||| ||||||||||||||||||||||||||||||| | |||||| ||||  |||||||||||||     
T  1854 cttagaagatatgcgcgttggttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcatacaaataggcgagaactcaggcacac 1755  T
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattg 279  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||| |||| || |||||||| |||||||    
T  1754 tgaaccgtgccagaatgttggaacatcgtatccaacatcttacaaagacgcctaaacacatgttgaaacattg 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 25271 - 24985
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| ||||||| |||    
T  25271 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattcaaca 25172  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   | |||||||||| | |||  |||||||| |||| |||||||||||||||||| ||||||||||||| ||||||||||||  ||||| |    
T  25171 gctgattcttagatgatatgtgcgatgcttgatcaataagttaagcaaatattgtttccttaaataataaagggcgcatgtacaaacaggcgagaactta 25072  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    |||||| |||||||||||| ||||||||| | |||||||||||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  25071 ggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttccagagacgcctaaacacatgttgaaactttggttccaa 24985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 2462 - 2682
Alignment:
Q  7 ggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatata-aacactagtttaggaatattccacaactga 105  Q
    ||||||||||||||||||||||||||| |||||||||   ||||||||| ||||||||||||||||||| || || | ||||| ||||||||||| ||||    
T  2462 ggaaagtcctaaaatgtcggaacatctataggatcgttccaaacaataataaatatttcctaaaatatataatac-actttagaaatattccacagctga 2560  T
Q  106 ttatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcac 205  Q
    || |   |||||||| ||||| |||  |||||||| |||| ||||||||||||||||||||||||||||||  ||||||||||| |  ||||||||||||    
T  2561 ttcttagaagatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgtgcgtacaaacagtcgagaactcaggcac 2660  T
Q  206 attgaaccgtgccaagatgttg 227  Q
    | ||||||||||||||||||||    
T  2661 actgaaccgtgccaagatgttg 2682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 260
Target Start/End: Original strand, 9288 - 9499
Alignment:
Q  49 acaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaa 148  Q
    |||||||||||||||||||||||||||||  ||| ||||| ||||||||||| |||||| |||| ||||||| | ||| ||| | |||||||||||| ||    
T  9288 acaataacaaatatttcctaaaatataaaatctactttagaaatattccacagctgattttgtatagatatgcgtgttgcttggacaataagataaggaa 9387  T
Q  149 atattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    |||||||| ||||||||||||||| ||||    ||| | | ||||||||||||||||| ||||||||||||||| |||||||| | |||||||||| |||    
T  9388 atattgttcccttaaacaataaagagcgcgtacacatatatgcatgaactcaggcacactgaaccgtgccaagaagttggaacattgtatccaacacctt 9487  T
Q  249 acaaagatgcct 260  Q
    ||| ||||||||    
T  9488 acagagatgcct 9499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 26971 - 27143
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    ||||||||||||||||||||| | ||||||||||||||| |||| |||||||   ||||||||||||||||||||| ||| | |||||||||||||||||    
T  26971 aaatatggaaagtcctaaaatataggaacatctttaggaacgtccaaaacaacttcaaatatttcctaaaatataatcacaactttaggaatattccaca 27070  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagg 173  Q
    ||||||  || ||||||||||||||| |||  ||||||||||||| | |||| ||||||||||| ||||||||    
T  27071 actgatcctgcaaagatatgtgcgttgcttgatcaataagataaggacatatggtttccttaaataataaagg 27143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 37156 - 37435
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||| ||||||||||||||||||||| | |||||||||   ||||||||| |||||||||||||||  |||   |   ||||| |||||||||||    
T  37156 aaatctggacagtcctaaaatgtcggaacatttataggatcgttccaaacaataataaatatttcctaaaaactaatatcatttttagaaatattccaca 37255  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
     |||||| |   |||||||| | ||| |||  ||||||||||||| ||||||||||||||||||||||||||| ||| | |||||| ||||  ||||| |    
T  37256 gctgattcttagaagatatgcgtgttgcttgatcaataagataaggaaatattgtttccttaaacaataaaggacgcgcctacaaataggcgagaactta 37355  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattg 279  Q
    |||||| ||||||||| || ||||||||||| | ||||||||||| ||||| ||| |||| || |||||||| |||||||    
T  37356 ggcacactgaaccgtgtcaggatgttggaacattgtatccaacattttacagagacgcctaaacacatgttgaaacattg 37435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 47 - 248
Target Start/End: Original strand, 16117 - 16318
Alignment:
Q  47 aaacaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgattatgtaaagatatgtgcgttcctttgtcaataagataaga 146  Q
    ||||||||| |||||||||||||||||||||    | ||||| ||||||||| | |||||| |   |||||||| ||||| |||  |||||||| ||||     
T  16117 aaacaataataaatatttcctaaaatataaaatacactttagaaatattccatagctgattcttagaagatatgcgcgttgcttgatcaataagttaagg 16216  T
Q  147 aaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatc 246  Q
    |||||||||||||||||||||||||||| || |||||||||||    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  16217 aaatattgtttccttaaacaataaagggtgcgcgtacaaacagaagagaactcaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatc 16316  T
Q  247 tt 248  Q
    ||    
T  16317 tt 16318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 47985 - 47737
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| |||||||||||||||||||||||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| ||||||||  |    
T  47985 aaatctggaaagtcctaaaatgtcggaacatttataggatcgttccaaacaatattaaatatttcctaaaatataaaatacattttagaaatattcctta 47886  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaaca-ggcatgaactc 199  Q
     |||||| |   |||||||| ||| | |||  |||||||| |||| ||||||||||| ||||||||| ||||||||| ||||||||||  ||  ||||||    
T  47885 gctgattcttagaagatatgcgcgctgcttgatcaataagttaaggaaatattgttttcttaaacaacaaagggcgcgcgtacaaacaccgcgagaactc 47786  T
Q  200 aggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    ||||||| |||||||||||| |||||||||   ||||||||||||||||    
T  47785 aggcacactgaaccgtgccaggatgttggagtatcgtatccaacatctt 47737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 49 - 286
Target Start/End: Complemental strand, 1546 - 1308
Alignment:
Q  49 acaataacaaatatttcctaaaatataaacactagtttaggaatattccacaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaa 148  Q
    ||||||| |||||||| ||||||||||||    ||||||| ||||||| ||| |||||| |   | |||||| ||||| |||  |||||||| |||| ||    
T  1546 acaataataaatatttgctaaaatataaaatacagtttagaaatattctacagctgattcttagatgatatgcgcgttgcttgatcaataagttaaggaa 1447  T
Q  149 atattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    |||||||||||||||||||||||||| || |||||||||||||  ||||||||||||| |||||| ||| | ||||||||| | || |||||||||||||    
T  1446 atattgtttccttaaacaataaagggtgcgcgtacaaacaggcgagaactcaggcacactgaaccatgctaggatgttggagcatcatatccaacatctt 1347  T
Q  249 acaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
     || ||| |||| || |||||||| ||| ||| ||||||    
T  1346 ccagagacgcctaaacacatgttgaaactttggttccaa 1308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 109852 - 109566
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| ||||||||||||||||||  |||||| | |||||||||   |||||| |  |||||||||||||||||||||    | ||||| |||||||||||    
T  109852 aaatctggaaagtcctaaaatgttagaacatttataggatcgttccaaacaaaattaaatatttcctaaaatataaaatacactttagaaatattccaca 109753  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
    | ||||| |   | |||||| ||||| |||  |||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||||  |||||||    
T  109752 attgattcttagatgatatgcgcgttgcttgatcaataagttaaggaaatcttgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaactca 109653  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaa-acatgttggaacattgattccaa 286  Q
    | |||| | |||||| ||| ||||||| | | ||| ||| |||||||| || ||| |||| || |||||||| ||| ||| ||||||    
T  109652 gacacactaaaccgttccaggatgttgaagcatcgcatctaacatcttccagagacgcctaaacacatgttgaaactttggttccaa 109566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 159637 - 159884
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctttaggatcgtctaaaacaataacaaatatttcctaaaatataaacactagtttaggaatattccaca 100  Q
    |||| ||||||| ||||||||||| |||||| | |||||||||   ||||||||  |||||||||||||||||||||    | ||||| |||||||||||    
T  159637 aaatctggaaagacctaaaatgtcagaacatttataggatcgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccaca 159736  T
Q  101 actgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactca 200  Q
      ||||| |   | |||||| ||||| |||  |||||||| |||| |||||||||||||||||||||||||||| ||  ||||||||||||  |||||||    
T  159737 gttgattcttagatgatatgcgcgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggtgcgtgtacaaacaggcgagaactca 159836  T
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatctt 248  Q
    |  ||| || ||||||||| ||||||||  | || |||||||||||||    
T  159837 gagacactggaccgtgccaggatgttggggcatcatatccaacatctt 159884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 98 - 278
Target Start/End: Original strand, 626 - 805
Alignment:
Q  98 acaactgattatgtaaagatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaac 197  Q
    |||||||||| | || |||||||   ||| ||| |||||||||||||| |||||| ||||||||||| |||| | ||||| ||||     ||||||||||    
T  626 acaactgattctatacagatatgcatgttacttggtcaataagataaggaaatatggtttccttaaataatacaaggcgcgcgtaagtgtaggcatgaac 725  T
Q  198 tcaggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacatt 278  Q
     |||||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||||||| |||  |||||||||    
T  726 -caggcacactgaaccgtgccaagatgttggaacatcgtatccaacatcttacagacatgcctgaaccatcctggaacatt 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 114 - 286
Target Start/End: Original strand, 88425 - 88596
Alignment:
Q  114 agatatgtgcgttcctttgtcaataagataagaaaatattgtttccttaaacaataaagggcgcacgtacaaacaggcatgaactcaggcacattgaacc 213  Q
    ||||||| ||||| ||| | |||||||||||| || ||||||| ||||||||||||||| |||| |||||| | | ||||||||||||||||| ||||||    
T  88425 agatatgcgcgttgcttggacaataagataaggaactattgttcccttaaacaataaagagcgcgcgtacatatatgcatgaactcaggcacactgaacc 88524  T
Q  214 gtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctga-aacatgttggaacattgattccaa 286  Q
     || || ||||||||||| | ||||||||||||||||  |||||||| |  |||||||||||| ||| ||||||    
T  88525 atgtcaggatgttggaacattgtatccaacatcttac--agatgcctaaccacatgttggaactttggttccaa 88596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 38084 - 38149
Alignment:
Q  214 gtgccaagatgttggaacgtcgtatccaacatcttacaaagatgcctgaaacatgttggaacattg 279  Q
    |||||| ||||||||||| ||||||||||||||||||| | |||| ||| ||||| ||||||||||    
T  38084 gtgccaggatgttggaacatcgtatccaacatcttacataaatgcttgagacatgatggaacattg 38149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 45361 - 45311
Alignment:
Q  201 ggcacattgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||||| |||||| ||||||||||||||||| |||||||||||||| ||||    
T  45361 ggcacactgaaccatgccaagatgttggaacatcgtatccaacatcataca 45311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 52328 - 52285
Alignment:
Q  208 tgaaccgtgccaagatgttggaacgtcgtatccaacatcttaca 251  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||    
T  52328 tgaaccgtaccaagatgttggaacatcgtatccaacatcataca 52285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11747 - 11780
Alignment:
Q  1 aaatatggaaagtcctaaaatgtcggaacatctt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  11747 aaatatggaaagtcctaaaatgtaggaacatctt 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University