View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11896_low_21 (Length: 276)

Name: NF11896_low_21
Description: NF11896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11896_low_21
NF11896_low_21
[»] chr7 (40 HSPs)
chr7 (1-276)||(26935458-26935741)
chr7 (46-175)||(27121603-27121732)
chr7 (73-178)||(38010665-38010777)
chr7 (46-123)||(22759110-22759187)
chr7 (46-98)||(8445210-8445262)
chr7 (68-132)||(43318588-43318652)
chr7 (46-123)||(7100687-7100763)
chr7 (46-117)||(35536031-35536102)
chr7 (46-116)||(7244626-7244696)
chr7 (48-122)||(33894549-33894622)
chr7 (39-117)||(45593794-45593872)
chr7 (119-176)||(4966160-4966217)
chr7 (46-115)||(5628643-5628712)
chr7 (64-176)||(23918899-23919018)
chr7 (48-117)||(24973870-24973939)
chr7 (68-117)||(35266845-35266894)
chr7 (63-112)||(43152982-43153031)
chr7 (46-87)||(45078217-45078258)
chr7 (68-112)||(28613614-28613658)
chr7 (46-117)||(30751441-30751512)
chr7 (128-175)||(40428568-40428615)
chr7 (144-198)||(20553132-20553186)
chr7 (46-124)||(39539829-39539907)
chr7 (68-110)||(45806408-45806450)
chr7 (46-124)||(47004011-47004089)
chr7 (46-124)||(49060464-49060542)
chr7 (72-117)||(1417214-1417259)
chr7 (112-177)||(12792506-12792571)
chr7 (71-124)||(12835005-12835058)
chr7 (124-177)||(27378836-27378889)
chr7 (53-122)||(30133980-30134049)
chr7 (153-213)||(36598327-36598388)
chr7 (68-117)||(39591542-39591591)
chr7 (59-112)||(40009407-40009460)
chr7 (54-98)||(5276156-5276200)
chr7 (121-181)||(6552296-6552356)
chr7 (50-98)||(7513562-7513610)
chr7 (143-175)||(12234899-12234931)
chr7 (68-116)||(28178915-28178963)
chr7 (46-98)||(29574695-29574747)
[»] chr5 (50 HSPs)
chr5 (68-178)||(11615454-11615564)
chr5 (46-174)||(11684347-11684473)
chr5 (19-98)||(26516195-26516274)
chr5 (41-182)||(3237018-3237160)
chr5 (37-117)||(4991018-4991098)
chr5 (22-98)||(20982229-20982305)
chr5 (19-117)||(6733968-6734065)
chr5 (52-176)||(16944992-16945121)
chr5 (46-124)||(36539670-36539748)
chr5 (46-99)||(10391277-10391330)
chr5 (68-112)||(35446001-35446045)
chr5 (68-115)||(10363696-10363743)
chr5 (119-178)||(17258890-17258949)
chr5 (53-178)||(4855629-4855761)
chr5 (119-173)||(30653388-30653442)
chr5 (46-124)||(32059657-32059734)
chr5 (129-178)||(12521542-12521591)
chr5 (49-98)||(16863708-16863757)
chr5 (51-124)||(29588809-29588881)
chr5 (46-111)||(35095864-35095929)
chr5 (68-173)||(43215325-43215429)
chr5 (53-117)||(9202823-9202887)
chr5 (53-113)||(11835208-11835268)
chr5 (46-122)||(33961627-33961703)
chr5 (124-184)||(37588361-37588421)
chr5 (64-124)||(42181160-42181220)
chr5 (68-112)||(42500305-42500349)
chr5 (119-170)||(8985665-8985716)
chr5 (119-178)||(36638751-36638810)
chr5 (143-178)||(37611222-37611257)
chr5 (143-178)||(37787952-37787987)
chr5 (68-138)||(465900-465970)
chr5 (79-117)||(12595815-12595853)
chr5 (70-124)||(14295454-14295508)
chr5 (19-117)||(35963145-35963243)
chr5 (46-112)||(40097483-40097549)
chr5 (66-111)||(2817901-2817946)
chr5 (145-178)||(9106851-9106884)
chr5 (39-124)||(19177396-19177481)
chr5 (72-112)||(1295842-1295882)
chr5 (72-124)||(7853608-7853660)
chr5 (80-124)||(11667121-11667165)
chr5 (72-112)||(14932240-14932280)
chr5 (119-175)||(16889739-16889795)
chr5 (46-98)||(19113211-19113263)
chr5 (20-124)||(32172551-32172655)
chr5 (143-175)||(37526209-37526241)
chr5 (143-175)||(37690646-37690678)
chr5 (46-94)||(40499773-40499821)
chr5 (68-112)||(42646861-42646905)
[»] chr8 (31 HSPs)
chr8 (46-177)||(11494077-11494208)
chr8 (55-124)||(1112786-1112855)
chr8 (19-175)||(4558695-4558858)
chr8 (46-117)||(7026655-7026726)
chr8 (128-178)||(2458573-2458623)
chr8 (46-112)||(14482126-14482192)
chr8 (75-124)||(42237490-42237539)
chr8 (47-169)||(10722556-10722678)
chr8 (52-115)||(42597331-42597394)
chr8 (52-178)||(11493902-11494028)
chr8 (90-176)||(30277254-30277339)
chr8 (19-124)||(12972753-12972858)
chr8 (119-175)||(39268513-39268570)
chr8 (68-124)||(8908996-8909052)
chr8 (124-176)||(14949875-14949927)
chr8 (68-124)||(16210954-16211010)
chr8 (21-124)||(31884493-31884596)
chr8 (21-116)||(40280281-40280376)
chr8 (37-83)||(6918946-6918992)
chr8 (46-112)||(20672696-20672762)
chr8 (46-124)||(34788495-34788573)
chr8 (142-176)||(39866743-39866777)
chr8 (53-122)||(37444485-37444554)
chr8 (121-178)||(42215313-42215370)
chr8 (23-107)||(2364558-2364642)
chr8 (60-124)||(3537099-3537163)
chr8 (139-175)||(6950346-6950382)
chr8 (143-175)||(11183573-11183605)
chr8 (124-176)||(31862502-31862554)
chr8 (46-98)||(35298572-35298624)
chr8 (72-124)||(35374441-35374493)
[»] chr4 (46 HSPs)
chr4 (19-176)||(22684530-22684689)
chr4 (73-175)||(47800581-47800683)
chr4 (68-117)||(42321954-42322003)
chr4 (46-176)||(54325046-54325183)
chr4 (54-112)||(17884000-17884058)
chr4 (46-124)||(30024624-30024702)
chr4 (46-111)||(51555948-51556013)
chr4 (46-173)||(21157692-21157826)
chr4 (19-98)||(485978-486057)
chr4 (51-114)||(1404351-1404414)
chr4 (46-116)||(4191663-4191734)
chr4 (68-107)||(31851400-31851439)
chr4 (46-176)||(49219063-49219200)
chr4 (125-176)||(51117008-51117059)
chr4 (125-191)||(1137722-1137788)
chr4 (47-124)||(8422907-8422982)
chr4 (46-174)||(14011158-14011293)
chr4 (124-173)||(18019981-18020030)
chr4 (19-107)||(4471068-4471156)
chr4 (68-112)||(43505902-43505946)
chr4 (46-117)||(25409810-25409881)
chr4 (57-124)||(30338660-30338727)
chr4 (19-98)||(46796915-46796994)
chr4 (49-96)||(47970245-47970292)
chr4 (69-124)||(51630058-51630113)
chr4 (46-132)||(55437346-55437430)
chr4 (37-87)||(2980576-2980626)
chr4 (119-181)||(20105435-20105496)
chr4 (124-178)||(21043242-21043296)
chr4 (51-105)||(28623218-28623272)
chr4 (46-124)||(32066478-32066555)
chr4 (143-189)||(35405975-35406021)
chr4 (49-111)||(41088311-41088373)
chr4 (44-117)||(5219575-5219648)
chr4 (39-116)||(7022585-7022662)
chr4 (72-117)||(10192234-10192279)
chr4 (143-176)||(19429737-19429770)
chr4 (79-124)||(27043898-27043943)
chr4 (53-98)||(50745931-50745976)
chr4 (68-117)||(52170061-52170110)
chr4 (71-112)||(54069497-54069538)
chr4 (68-112)||(3155549-3155593)
chr4 (68-112)||(29388560-29388604)
chr4 (54-110)||(39438618-39438674)
chr4 (68-112)||(39603527-39603571)
chr4 (68-112)||(41336707-41336750)
[»] chr2 (47 HSPs)
chr2 (46-124)||(18962106-18962184)
chr2 (19-123)||(35459807-35459911)
chr2 (46-152)||(33267556-33267662)
chr2 (124-176)||(32821818-32821870)
chr2 (46-132)||(14209201-14209287)
chr2 (73-178)||(22681192-22681304)
chr2 (89-170)||(25661082-25661162)
chr2 (49-117)||(3673734-3673802)
chr2 (46-98)||(10190203-10190255)
chr2 (52-124)||(28902007-28902079)
chr2 (68-172)||(40837448-40837552)
chr2 (124-173)||(3059286-3059335)
chr2 (46-123)||(17952770-17952847)
chr2 (69-177)||(31739980-31740082)
chr2 (129-177)||(1647250-1647298)
chr2 (68-176)||(1939341-1939456)
chr2 (53-113)||(7825183-7825243)
chr2 (9-124)||(11393433-11393549)
chr2 (9-124)||(11410094-11410210)
chr2 (68-112)||(15305603-15305647)
chr2 (68-112)||(42420374-42420418)
chr2 (53-112)||(4026748-4026807)
chr2 (39-114)||(29729842-29729917)
chr2 (53-112)||(36114350-36114409)
chr2 (119-177)||(7871647-7871705)
chr2 (124-178)||(10198487-10198541)
chr2 (119-169)||(41817172-41817222)
chr2 (46-116)||(44606164-44606234)
chr2 (9-98)||(3102580-3102669)
chr2 (51-178)||(3235391-3235523)
chr2 (68-105)||(5998789-5998826)
chr2 (51-116)||(11344360-11344425)
chr2 (145-198)||(16551827-16551880)
chr2 (46-123)||(28803575-28803652)
chr2 (53-114)||(29316853-29316914)
chr2 (46-111)||(33197320-33197385)
chr2 (143-175)||(1160750-1160782)
chr2 (54-98)||(5045251-5045295)
chr2 (142-174)||(11063220-11063252)
chr2 (119-175)||(13736303-13736359)
chr2 (47-107)||(31461363-31461423)
chr2 (68-112)||(31561833-31561877)
chr2 (124-176)||(43141880-43141932)
chr2 (68-112)||(43279607-43279651)
chr2 (47-122)||(43808501-43808576)
chr2 (53-97)||(44443251-44443295)
chr2 (68-112)||(45229458-45229502)
[»] chr1 (50 HSPs)
chr1 (54-176)||(27140417-27140539)
chr1 (9-127)||(29793988-29794105)
chr1 (39-124)||(45990126-45990211)
chr1 (46-122)||(870969-871045)
chr1 (53-178)||(37593691-37593808)
chr1 (68-124)||(37841944-37842000)
chr1 (37-116)||(7274015-7274094)
chr1 (55-178)||(10744241-10744364)
chr1 (53-112)||(34619458-34619517)
chr1 (46-124)||(4200153-4200231)
chr1 (119-181)||(5047150-5047212)
chr1 (46-124)||(44032067-44032145)
chr1 (46-116)||(48748659-48748728)
chr1 (46-124)||(49557065-49557143)
chr1 (119-177)||(51929783-51929841)
chr1 (46-159)||(23895260-23895373)
chr1 (147-184)||(37416837-37416874)
chr1 (18-111)||(44236612-44236705)
chr1 (48-116)||(6933037-6933105)
chr1 (115-175)||(43029412-43029472)
chr1 (82-169)||(2522596-2522683)
chr1 (121-176)||(6279405-6279460)
chr1 (119-178)||(6292497-6292556)
chr1 (124-178)||(7262525-7262579)
chr1 (69-123)||(15687142-15687196)
chr1 (71-109)||(36070199-36070237)
chr1 (46-116)||(38651485-38651555)
chr1 (50-112)||(46499934-46499996)
chr1 (19-124)||(49516966-49517072)
chr1 (68-117)||(5941522-5941571)
chr1 (68-113)||(8852806-8852851)
chr1 (49-94)||(13037791-13037836)
chr1 (143-176)||(26184776-26184809)
chr1 (122-167)||(28083308-28083353)
chr1 (46-115)||(40357963-40358032)
chr1 (124-189)||(43722154-43722219)
chr1 (50-115)||(45170401-45170466)
chr1 (142-178)||(219558-219594)
chr1 (124-176)||(3215730-3215782)
chr1 (68-124)||(6074420-6074476)
chr1 (72-124)||(10586440-10586492)
chr1 (68-116)||(14737781-14737829)
chr1 (49-117)||(17269177-17269245)
chr1 (68-104)||(17830100-17830136)
chr1 (72-112)||(41184730-41184770)
chr1 (68-112)||(45145172-45145216)
chr1 (71-107)||(46252767-46252803)
chr1 (68-112)||(47432042-47432086)
chr1 (142-178)||(48748322-48748358)
chr1 (68-116)||(50319238-50319286)
[»] chr3 (52 HSPs)
chr3 (68-146)||(42809247-42809325)
chr3 (46-98)||(25964366-25964418)
chr3 (46-117)||(22232750-22232821)
chr3 (39-122)||(27792789-27792872)
chr3 (19-98)||(36200015-36200094)
chr3 (68-178)||(2128265-2128375)
chr3 (46-116)||(16790432-16790502)
chr3 (46-116)||(44374720-44374790)
chr3 (68-117)||(15304422-15304471)
chr3 (68-124)||(37689452-37689508)
chr3 (68-132)||(42808925-42808989)
chr3 (46-176)||(38462205-38462342)
chr3 (46-125)||(41028918-41028997)
chr3 (33-116)||(44284134-44284217)
chr3 (68-178)||(20669125-20669235)
chr3 (68-117)||(10101551-10101600)
chr3 (68-117)||(10212476-10212525)
chr3 (47-176)||(25459642-25459768)
chr3 (124-181)||(30322024-30322081)
chr3 (67-176)||(34414793-34414902)
chr3 (59-104)||(49465751-49465796)
chr3 (68-117)||(52618949-52618998)
chr3 (68-112)||(44061103-44061147)
chr3 (72-124)||(45433007-45433059)
chr3 (54-98)||(49546581-49546625)
chr3 (68-124)||(49586984-49587040)
chr3 (47-122)||(905040-905115)
chr3 (125-175)||(13371127-13371177)
chr3 (47-124)||(25183056-25183134)
chr3 (45-122)||(26330386-26330461)
chr3 (46-124)||(28779280-28779358)
chr3 (46-124)||(32703062-32703140)
chr3 (115-169)||(34924554-34924608)
chr3 (46-112)||(39971243-39971309)
chr3 (46-96)||(43116524-43116574)
chr3 (143-181)||(48933604-48933642)
chr3 (37-98)||(16790182-16790243)
chr3 (10-95)||(20504100-20504185)
chr3 (128-165)||(23315639-23315676)
chr3 (21-78)||(28842971-28843028)
chr3 (68-113)||(30669049-30669094)
chr3 (68-137)||(34363951-34364020)
chr3 (47-112)||(36189491-36189556)
chr3 (124-176)||(237406-237458)
chr3 (68-112)||(20880423-20880466)
chr3 (21-124)||(21862243-21862347)
chr3 (68-112)||(30956706-30956750)
chr3 (68-112)||(30972518-30972562)
chr3 (33-112)||(35127451-35127531)
chr3 (69-117)||(36783409-36783457)
chr3 (114-178)||(41644452-41644516)
chr3 (119-175)||(52412914-52412970)
[»] chr6 (39 HSPs)
chr6 (38-117)||(3217265-3217344)
chr6 (37-124)||(22742281-22742368)
chr6 (19-117)||(8349739-8349837)
chr6 (46-124)||(29274297-29274375)
chr6 (46-126)||(7351674-7351754)
chr6 (53-124)||(4006645-4006716)
chr6 (47-122)||(7713950-7714025)
chr6 (59-113)||(31624195-31624249)
chr6 (55-176)||(2034455-2034575)
chr6 (68-175)||(281858-281972)
chr6 (46-98)||(3169339-3169391)
chr6 (68-124)||(9093624-9093680)
chr6 (68-112)||(30536424-30536468)
chr6 (50-94)||(33259744-33259788)
chr6 (37-105)||(33911368-33911436)
chr6 (46-120)||(1497904-1497979)
chr6 (46-97)||(4325403-4325454)
chr6 (143-178)||(4420671-4420706)
chr6 (45-96)||(31668781-31668832)
chr6 (21-176)||(32386115-32386270)
chr6 (46-117)||(32386638-32386709)
chr6 (44-83)||(32578059-32578098)
chr6 (53-131)||(264302-264380)
chr6 (46-124)||(2514626-2514704)
chr6 (136-178)||(6536968-6537010)
chr6 (125-175)||(20512654-20512704)
chr6 (46-112)||(29269820-29269886)
chr6 (47-178)||(30523586-30523722)
chr6 (55-97)||(33416318-33416360)
chr6 (124-178)||(34403864-34403918)
chr6 (68-117)||(2027481-2027530)
chr6 (19-124)||(2206487-2206592)
chr6 (46-162)||(13360659-13360782)
chr6 (124-177)||(25103287-25103340)
chr6 (75-112)||(28621190-28621227)
chr6 (68-112)||(8147648-8147692)
chr6 (68-112)||(18076142-18076186)
chr6 (73-117)||(28660835-28660879)
chr6 (68-112)||(30536638-30536682)
[»] scaffold0024 (3 HSPs)
scaffold0024 (68-137)||(21333-21402)
scaffold0024 (64-132)||(58879-58947)
scaffold0024 (46-117)||(27500-27571)
[»] scaffold0428 (1 HSPs)
scaffold0428 (50-94)||(3832-3876)
[»] scaffold0060 (1 HSPs)
scaffold0060 (46-98)||(63379-63431)
[»] scaffold0590 (1 HSPs)
scaffold0590 (47-98)||(1168-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (47-98)||(2756-2807)
[»] scaffold0103 (1 HSPs)
scaffold0103 (68-117)||(51514-51563)
[»] scaffold0020 (1 HSPs)
scaffold0020 (124-175)||(159983-160034)
[»] scaffold0654 (1 HSPs)
scaffold0654 (46-116)||(6713-6783)
[»] scaffold0089 (1 HSPs)
scaffold0089 (125-175)||(33637-33687)
[»] scaffold0014 (1 HSPs)
scaffold0014 (46-116)||(116632-116702)
[»] scaffold0153 (2 HSPs)
scaffold0153 (143-175)||(6504-6536)
scaffold0153 (143-175)||(13524-13556)
[»] scaffold0003 (1 HSPs)
scaffold0003 (124-176)||(306335-306387)


Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 26935741 - 26935458
Alignment:
Q  1 ttgattatgataaaccggttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataagg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26935741 ttgattatgataaaccggttaattaagcgcttataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataagg 26935642  T
Q  101 ttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaatatttcgtaagatctttccaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  26935641 ttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataagctgaaaacagcttatgaatatttcataagatctttccaaa 26935542  T
Q  201 gctcactcaaacagcttatgacta--------tatctataatctatgcataatacaagattgcatatccatggtatttgcaatc 276  Q
    ||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26935541 gctcactcaaacagcttatgactatatcaatatatctataatcgatgcataatacaagattgcatatccatggtatttgcaatc 26935458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 27121732 - 27121603
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaaga 145  Q
    ||||||||||| | ||| ||| |||| ||||| ||||| |||||||||||||| || ||||||||||||||| |||| | |  |||| |||| ||  |||    
T  27121732 ttatcatataattccttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataagctgtgtaaataagctatacttgaga 27121633  T
Q  146 gcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||| ||  ||||||||||||||    
T  27121632 gcttatggaaacaagttgaaaacagcttat 27121603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 38010665 - 38010777
Alignment:
Q  73 tatttttataacaaatgataaaataaggttaaattgttttcatatgagctat-------tttcataatctattctaaagagcttatggaaataaactgaa 165  Q
    |||||||| |||||| ||||||| || |  ||||||||||||||| ||||||       ||||||||||||| ||| ||| ||||||||||||| || ||    
T  38010665 tatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaa 38010764  T
Q  166 aacagcttatgaa 178  Q
    |||||||||||||    
T  38010765 aacagcttatgaa 38010777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 22759110 - 22759187
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta 123  Q
    |||||||||||| | || ||| |||||||||| ||||||||| |||||||||| |  ||||||||||||||| |||||    
T  22759110 ttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagcta 22759187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 8445210 - 8445262
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||||||||| | | |||||||||||||||||||| ||||||||||    
T  8445210 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataa 8445262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 43318652 - 43318588
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataa 132  Q
    |||||||||| |||||||||||||||||||| || |||||||| |||||| ||||  ||||||||    
T  43318652 taagctatttctataacaaatgataaaataaagtcaaattgttatcatataagctgatttcataa 43318588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 7100763 - 7100687
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaa-ttgttttcatatgagcta 123  Q
    ||||||||||||| |||  ||||||||||||||||||||||| ||||||| || || ||| |||||||||||| |||||    
T  7100763 ttatcatataagtactt--gtgtaagctatttttataacaaaagataaaaaaaagtcaaatttgttttcatataagcta 7100687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 35536031 - 35536102
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||||  |||| ||| |||||||||| ||||||| | |||||||||| || |||||||||||||||    
T  35536031 ttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatat 35536102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 7244626 - 7244696
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    ||||||||||||||||| ||| |||||||||| |||| |||| ||||||| || || ||| ||||||||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 33894549 - 33894622
Alignment:
Q  48 atcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    ||||| ||||||||| ||| |||||||||| ||||||||| |||||||||| || ||| ||||||||||| ||||    
T  33894549 atcatgtaagtgcttatgtataagctatttctataacaaaagataaaataa-gtcaaactgttttcatataagct 33894622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 45593872 - 45593794
Alignment:
Q  39 taagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||| ||||||||||| ||||| ||| |||||||||| | |||||||  ||||||||| || ||| |||||||||||    
T  45593872 taagagtttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatat 45593794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 4966160 - 4966217
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    |||| ||||||||| | || || |||||||||||||||||||||||||||| ||||||    
T  4966160 agctgttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatg 4966217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 5628712 - 5628643
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcat 115  Q
    |||||||| ||| |||| ||  ||||||||||||||||||||||||||||||  ||| || |||||||||    
T  5628712 ttatcatacaagggcttatgcataagctatttttataacaaatgataaaatagagttgaactgttttcat 5628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 23918899 - 23919018
Alignment:
Q  64 tgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttc-------ataatctattctaaagagcttatggaaa 156  Q
    |||||||| ||| | ||| ||||| |||||||||| || ||||||||||||||| ||||||  ||       |||| ||||||| ||| |||||| ||||    
T  23918899 tgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataatctgtaatcataaactattctgaagggcttattgaaa 23918998  T
Q  157 taaactgaaaacagcttatg 176  Q
     |||||||||||||||||||    
T  23918999 aaaactgaaaacagcttatg 23919018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 24973870 - 24973939
Alignment:
Q  48 atcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||||||| |||  ||||||||| ||||||||| ||||||||||  | ||||||||| |||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccatat 24973939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 35266845 - 35266894
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||| ||||||||||||| |||||| |||||||| |||||||||    
T  35266845 taagctatttctataacaaatgattaaataaagttaaatttttttcatat 35266894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 43153031 - 43152982
Alignment:
Q  63 ttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||| |||||||||| ||||||||| |||||||||| |||||||||||||    
T  43153031 ttgtataagctatttctataacaaaagataaaataaagttaaattgtttt 43152982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 45078217 - 45078258
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaa 87  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  45078217 ttatcatataagtgcttatgtataagctatttttataacaaa 45078258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 28613658 - 28613614
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||||||||||||| ||||||| || |||||||||||||    
T  28613658 taagctatttttataacaaaagataaaacaaagttaaattgtttt 28613614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 30751441 - 30751512
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||||||||| ||  ||| |||||||| |||||||  ||||||||| || ||||| |||||||||    
T  30751441 ttatcatataagtgcttgtgaataaactatttttgtaacaaaatataaaataaagtcaaattattttcatat 30751512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 40428568 - 40428615
Alignment:
Q  128 cataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    ||||| |||| ||||||||||||||||||||| |||||||||| ||||    
T  40428568 cataagctatcctaaagagcttatggaaataagctgaaaacagtttat 40428615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 20553132 - 20553186
Alignment:
Q  144 gagcttatggaaataaactgaaaacagcttatgaatatttcgtaagatctttcca 198  Q
    |||||||||||||||| ||||||||| |||||||| || ||||||| | ||||||    
T  20553132 gagcttatggaaataatctgaaaacaacttatgaacatgtcgtaagctgtttcca 20553186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 39539907 - 39539829
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||| ||||||||| ||||||||||  |||| ||| |  |||||||  | ||||||||||||||| ||||||    
T  39539907 ttatcatataactgcttttgtataagctatttcgataataaaagtgaaaataaattcaaattgttttcatataagctat 39539829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 45806450 - 45806408
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtt 110  Q
    ||||||||||||||| |||| |||||||||| |||||||||||    
T  45806450 taagctatttttatagcaaaagataaaataacgttaaattgtt 45806408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 47004011 - 47004089
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||||||| || | |||||||||||| ||||||||  |||||||||| || ||| | |||| |||||| ||||    
T  47004011 ttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatatgaactat 47004089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 49060464 - 49060542
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||||||  || ||| |||||||||| |||||||||  ||||||||| || ||||| |||| |||| ||||||    
T  49060464 ttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctat 49060542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 1417214 - 1417259
Alignment:
Q  72 ctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||| ||||||||| |||||||||| || |||||||||||||||    
T  1417214 ctatttatataacaaaagataaaataaagtcaaattgttttcatat 1417259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 12792571 - 12792506
Alignment:
Q  112 tcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatga 177  Q
    |||||| |||||||||||||| ||||  | |||||||||| ||||||| |||| ||||| ||||||    
T  12792571 tcatataagctattttcataagctatcttgaagagcttattgaaataagctgataacagtttatga 12792506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 12835058 - 12835005
Alignment:
Q  71 gctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||| || |||||| |||||||||| || ||||||||||||||| ||||||    
T  12835058 gctatttctacaacaaaagataaaataaagtcaaattgttttcatattagctat 12835005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 27378889 - 27378836
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatga 177  Q
    ||||||||| |||| ||  |||||||||| |||||||||||||||| |||||||    
T  27378889 ttttcataaactatcctggagagcttatgaaaataaactgaaaacaacttatga 27378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 30133980 - 30134049
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    ||||||| || ||| ||||||||||||| |||||| |||||||||| || || |||||||| ||| ||||    
T  30133980 ataagtgtttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataagct 30134049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 36598388 - 36598327
Alignment:
Q  153 gaaataaactgaaaacagcttatgaatatttcgtaagatctttcca-aagctcactcaaaca 213  Q
    ||||||| |||||||||||||||||| || || |||||| |||||| |||||| ||||||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaaca 36598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 39591591 - 39591542
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||| ||||| ||||||||| |||||||||| || |||||||||||||||    
T  39591591 taagttatttctataacaaaagataaaataaagtcaaattgttttcatat 39591542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 40009407 - 40009460
Alignment:
Q  59 gcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||| ||| |||||| ||||||||||||| || ||||||| |||||||||||||    
T  40009407 gcttatgtataagctgtttttataacaaaagacaaaataaagttaaattgtttt 40009460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 5276156 - 5276200
Alignment:
Q  54 taagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||| ||| |||||||||||||||||||| ||||| ||||    
T  5276156 taagtgcttatgtataagctatttttataacaaaagataacataa 5276200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 6552356 - 6552296
Alignment:
Q  121 ctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaatat 181  Q
    |||||||||||| ||||  |  |||| ||||| |||||| |||||||||||||||||||||    
T  6552356 ctattttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatgaatat 6552296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 7513562 - 7513610
Alignment:
Q  50 catataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||||| ||| |||||||||||||  ||||| ||||||||||    
T  7513562 catataagtgcttatgtataagctatttttaagacaaaagataaaataa 7513610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 12234931 - 12234899
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||||||||| |||||||||||||||    
T  12234931 agagcttatggaaataagctgaaaacagcttat 12234899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 28178915 - 28178963
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||||||||| ||||||||| |||||||||| || | ||||||||||||    
T  28178915 taagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 29574747 - 29574695
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||| ||||| ||| |||||||||||||| ||||| ||| ||||||    
T  29574747 ttatcatataaatgcttatgtataagctatttttatgacaaaagatgaaataa 29574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 5e-25; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 68 - 178
Target Start/End: Original strand, 11615454 - 11615564
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaa 167  Q
    |||||||||||||||||||| |||||||||| || ||||||||| | ||| |||| |||||||||  ||| || | |||||||||||||||| |||||||    
T  11615454 taagctatttttataacaaaagataaaataaagtcaaattgtttacgtataagctgttttcataagatatccttatgagcttatggaaataagctgaaaa 11615553  T
Q  168 cagcttatgaa 178  Q
    |||||||||||    
T  11615554 cagcttatgaa 11615564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 11684347 - 11684473
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaaga 145  Q
    ||||||||||||||||  ||| ||||||||||||||||||||  ||||||||  || ||| ||||||||||| |||||||||||||| |||| ||  |||    
T  11684347 ttatcatataagtgctaatgtataagctatttttataacaaaatataaaata--gtgaaactgttttcatataagctattttcataagctatgctggaga 11684444  T
Q  146 gcttatggaaataaactgaaaacagctta 174  Q
    ||||| ||||||||  |||||||||||||    
T  11684445 gcttacggaaataagttgaaaacagctta 11684473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 26516195 - 26516274
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||||| ||| |||||| | ||||||||||||||||| ||| |||||||||| || |||||| ||||||||||    
T  26516195 ttaattaagcgcttatagcataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataa 26516274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 3237018 - 3237160
Alignment:
Q  41 agagattatcatataagtgcttt-tgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattc 139  Q
    ||||||||||||||||||| ||| | | |||||||||| ||| ||||| || ||||||   | |||   ||||||||| |||| ||||||||| |||| |    
T  3237018 agagattatcatataagtgttttatctataagctatttctattacaaaagacaaaatagaatcaaaccattttcatataagctgttttcataagctatcc 3237117  T
Q  140 taaagagcttatggaaataaactgaaaacagcttatgaatatt 182  Q
    ||||||||||||| |||||  ||||| ||| ||||||||||||    
T  3237118 taaagagcttatgaaaatatgctgaacacaacttatgaatatt 3237160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 4991098 - 4991018
Alignment:
Q  37 cataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||| |||||||||||||||| || ||| |||||||||||||||||||| ||||| ||||| | || || |||||||||    
T  4991098 cataagcgattatcatataagtgtttgtgtataagctatttttataacaaaagataacataagatcaatttattttcatat 4991018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 20982305 - 20982229
Alignment:
Q  22 attaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    |||||| ||| ||| |||||| | ||||||||||||||||| ||| |||||||||| ||||||||| ||||||||||    
T  20982305 attaagtgcttatagcataagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataa 20982229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 6734065 - 6733968
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||||||  ||  ||||| |||||||||||||||| || ||  ||| ||||||||||||| || |||||||||| | ||||||||||||||||    
T  6734065 ttaattaagcgcttctaatataagtgattatcatataagtgtttatgcataatctatttttataacgaaagataaaataaag-taaattgttttcatat 6733968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 176
Target Start/End: Complemental strand, 16945121 - 16944992
Alignment:
Q  52 tataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata-------tgagctattttcataatctattctaaag 144  Q
    ||||||||||| ||| |||||||||| || || ||| |||||||||  |||||||||||||||||       | |||||||||||| | |||| || |||    
T  16945121 tataagtgcttatgtataagctatttctacaagaaaagataaaata--gttaaattgttttcatagaagctataagctattttcattaactatcctgaag 16945024  T
Q  145 agcttatggaaataaactgaaaacagcttatg 176  Q
    |||||| | |||||| ||||||||||||||||    
T  16945023 agcttaagtaaataagctgaaaacagcttatg 16944992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 36539670 - 36539748
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||||||||| |||||||||||||| | || |||| |||||||||| || ||  ||||||||||| ||||||    
T  36539670 ttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctat 36539748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 10391277 - 10391330
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataag 99  Q
    |||||||||||||||||  || |||||||||||||||||||| |||||||||||    
T  10391277 ttatcatataagtgcttacgtataagctatttttataacaaaagataaaataag 10391330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 35446001 - 35446045
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||    
T  35446001 taagctatttttatagcaaatgataaaataaagttaaattgtttt 35446045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 10363696 - 10363743
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcat 115  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  10363696 taagctatttctataacaaaagataaaataaagttaaattgttttcat 10363743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 17258949 - 17258890
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||| ||||||||| |||| || ||||||||||| |||||| ||||||||||||||||||    
T  17258949 agctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaa 17258890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 4855629 - 4855761
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta-------ttttcataatctattctaaaga 145  Q
    |||||| ||| ||| | ||||||||||||||||||  ||||||||| ||||||||||| |||||| || ||       ||||||||| |||| | |||||    
T  4855629 ataagtacttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcataaactatcccaaaga 4855728  T
Q  146 gcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||||  ||||||| | ||||||||||| ||||    
T  4855729 gcttacagaaataagccgaaaacagcttctgaa 4855761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 30653442 - 30653388
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagctt 173  Q
    |||||||||||||| || ||||| | ||||||||||||||| |||||||||||||    
T  30653442 agctattttcataagcttttctagacagcttatggaaataagctgaaaacagctt 30653388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 32059734 - 32059657
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||||||||| ||| |||||| ||||| |||| || |||||||||| || ||| ||||||||||| ||||||    
T  32059734 ttatcatataagtgcttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctat 32059657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 12521542 - 12521591
Alignment:
Q  129 ataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||| ||||| | |||||||||||||||||| ||||||||||||||||||    
T  12521542 ataagctattttgaagagcttatggaaataagctgaaaacagcttatgaa 12521591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 16863708 - 16863757
Alignment:
Q  49 tcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    |||||||||||||| || ||||||||||||||||||||| ||| ||||||    
T  16863708 tcatataagtgcttatgcgtaagctatttttataacaaaagattaaataa 16863757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 29588809 - 29588881
Alignment:
Q  51 atataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||||| ||| |||||||||| |||||||||  ||||||||| |  ||||||||||||||| ||||||    
T  29588809 atataagtgcttatgtataagctatttctataacaaaatataaaataatg-aaaattgttttcatataagctat 29588881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 35095929 - 35095864
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttt 111  Q
    ||||||||||||||||| | | ||| |||||| ||||||||| |||||||||| || |||||||||    
T  35095929 ttatcatataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaaattgttt 35095864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 43215325 - 43215429
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaa 167  Q
    |||||||||| ||||||||| |||||| ||| ||||||||| ||| |||| || || |||||||| |||| ||||| ||  |||||||||||  ||||||    
T  43215325 taagctatttctataacaaaagataaa-taaagttaaattgcttttatataagttaatttcataagctatcctaaatagtgtatggaaataagatgaaaa 43215423  T
Q  168 cagctt 173  Q
     |||||    
T  43215424 tagctt 43215429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 9202887 - 9202823
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||| | | |||||||||| | || |||| |||||||||| ||||||||||||||||||    
T  9202887 ataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatat 9202823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 11835208 - 11835268
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttc 113  Q
    ||||||| || ||| ||| | |||||||||||||| |||||||||| ||||||||||||||    
T  11835208 ataagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaattgttttc 11835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 33961627 - 33961703
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    |||||||||||||| |||||| |||| || |||||||||||| |||||||||  |  || ||||||| |||||||||    
T  33961627 ttatcatataagtgtttttgtataaggtacttttataacaaaggataaaatatagccaatttgtttttatatgagct 33961703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 37588421 - 37588361
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaatatttc 184  Q
    |||||||||  ||||||  ||||||||||||||||| ||||||||||||||| || |||||    
T  37588421 ttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacatttc 37588361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 42181220 - 42181160
Alignment:
Q  64 tgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||| |||||||||||||||||| ||||||| || || |||| |||||||||| ||||||    
T  42181220 tgtgtcagctatttttataacaaaagataaaacaaagtcaaatggttttcatataagctat 42181160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 42500349 - 42500305
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||    
T  42500349 taagctatttttatatcaaaagataaaataaagttaaattgtttt 42500305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 8985665 - 8985716
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacag 170  Q
    |||||||||||||| |||| ||| |||||||||||||| || ||||||||||    
T  8985665 agctattttcataagctatcctatagagcttatggaaagaagctgaaaacag 8985716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 36638751 - 36638810
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||| |||||||||  ||| ||| ||||||||||||||||| ||||||| ||||||||||    
T  36638751 agctgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaa 36638810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 37611257 - 37611222
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttatgaa 178  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37611257 agagcttatggaaataacctgaaaacagcttatgaa 37611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 37787987 - 37787952
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttatgaa 178  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37787987 agagcttatggaaataacctgaaaacagcttatgaa 37787952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 465900 - 465970
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctatt 138  Q
    |||||||||| ||| ||||| |||||||||| |||||||||||||  ||| |||| ||| ||||| |||||    
T  465900 taagctatttctatgacaaaagataaaataaagttaaattgtttttgtataagctgtttacataagctatt 465970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 117
Target Start/End: Complemental strand, 12595853 - 12595815
Alignment:
Q  79 tataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  12595853 tataacaaaagataaaataaagttaaattgttttcatat 12595815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 14295454 - 14295508
Alignment:
Q  70 agctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||| ||||||||| |||||||||| || ||| ||||||||||| ||||||    
T  14295454 agctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 14295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 35963145 - 35963243
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||| ||||| || ||| |||||| |||||||| |||||||||| ||| |||  ||||| ||||| ||| ||| ||||||  ||||| |||||||||||    
T  35963145 ttaactaagcacttatagcataagcgattatcaaataagtgcttgtgtataaattatttctataagaaaagatcaaataaaattaaactgttttcatat 35963243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Complemental strand, 40097549 - 40097483
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| | ||| |||| ||||| ||||||| | |||||||||  |||||||||||||    
T  40097549 ttatcatataagtgcgtatgtataagttatttctataacagaagataaaatagagttaaattgtttt 40097483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 2817946 - 2817901
Alignment:
Q  66 tgtaagctatttttataacaaatgataaaataaggttaaattgttt 111  Q
    ||||||||||||||||||||||  ||||||||| || |||||||||    
T  2817946 tgtaagctatttttataacaaagtataaaataaagtaaaattgttt 2817901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 9106851 - 9106884
Alignment:
Q  145 agcttatggaaataaactgaaaacagcttatgaa 178  Q
    ||||||||||||||| ||||||||||||||||||    
T  9106851 agcttatggaaataagctgaaaacagcttatgaa 9106884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 19177396 - 19177481
Alignment:
Q  39 taagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||| ||||||||||||||||||| ||| ||| |||||| || |||| | |||||||| | ||  || ||||||||||| ||||||    
T  19177396 taagtgattatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctat 19177481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 1295882 - 1295842
Alignment:
Q  72 ctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||| | |||||||||||||||||| |||||||||||||    
T  1295882 ctatttatgtaacaaatgataaaataaagttaaattgtttt 1295842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 7853608 - 7853660
Alignment:
Q  72 ctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||| ||||||||| |||||||||| |||||||||||| | ||| ||||||    
T  7853608 ctatttctataacaaaagataaaataaagttaaattgtttccgtattagctat 7853660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 11667121 - 11667165
Alignment:
Q  80 ataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||| |||||||||| || || |||||||||||||||||||    
T  11667121 ataacaaaggataaaataaagtcaagttgttttcatatgagctat 11667165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 14932240 - 14932280
Alignment:
Q  72 ctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||| |||| |||||||||| |||||||||||||    
T  14932240 ctatttttatagcaaaagataaaataaagttaaattgtttt 14932280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 16889739 - 16889795
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    |||| ||||||||| |||| ||| |||| |||||||||||| ||||||||| |||||    
T  16889739 agctgttttcataagctatgctagagagtttatggaaataatctgaaaacaacttat 16889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 19113263 - 19113211
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||| ||||| ||| ||| ||||||||||||||||  |||||||||    
T  19113263 ttatcatataattgcttatgtataaactatttttataacaaaaaataaaataa 19113211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 32172551 - 32172655
Alignment:
Q  20 taattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatga 119  Q
    |||||||||||| | | |||||| | |||||||| ||| |||| ||| ||| |||||| || |||||| |||||||| | || || |||||| ||||| |    
T  32172551 taattaagcgcttacagcataagcgcttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataa 32172650  T
Q  120 gctat 124  Q
    |||||    
T  32172651 gctat 32172655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 37526241 - 37526209
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||||||||| |||||||||||||||    
T  37526241 agagcttatggaaataagctgaaaacagcttat 37526209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 37690678 - 37690646
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||||||||| |||||||||||||||    
T  37690678 agagcttatggaaataagctgaaaacagcttat 37690646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 40499821 - 40499773
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaa 94  Q
    ||||||||||||||||| |||  ||| ||||| ||||||||||||||||    
T  40499821 ttatcatataagtgcttatgtacaagttatttctataacaaatgataaa 40499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 42646861 - 42646905
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||| ||||||||||||||| |||||||| | |||||||||||||    
T  42646861 taagatatttttataacaaaggataaaattaagttaaattgtttt 42646905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 177
Target Start/End: Original strand, 11494077 - 11494208
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaaga 145  Q
    ||||||||||||||||||||| || | |||||| |||||||| ||||| |||| || ||| | ||||||||| | |||||||||||| ||||  | ||||    
T  11494077 ttatcatataagtgcttttgtatatgttattttcataacaaaagataacataaagtcaaacttttttcatataaactattttcataagctatcttgaaga 11494176  T
Q  146 gcttatggaaataaactgaaaacagcttatga 177  Q
    ||||||| |||||| |||||| ||||||||||    
T  11494177 gcttatgaaaataagctgaaagcagcttatga 11494208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 1112786 - 1112855
Alignment:
Q  55 aagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||| ||| || ||||||| ||||||||| |||||||||||||||||||||||||| || ||||||    
T  1112786 aagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctat 1112855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 4558695 - 4558858
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatg 118  Q
    ||||||| ||||| ||| |||||  | |||| || |||||| || ||| |||||||||| ||||| ||| |||||||||| |||||||| |||||||||     
T  4558695 ttaattacgcgcttatagcataaacgtttattatgtaagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatata 4558794  T
Q  119 agctat-------tttcataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
     |||||       || ||||| |||| ||| |||||||||||||||||||| |||||| |||||    
T  4558795 tgctataagctgtttccataagctatcctagagagcttatggaaataaactaaaaacaacttat 4558858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 7026655 - 7026726
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||||||||| ||  ||||||| | |||||||||| |||||||||| || |||||||||||||||    
T  7026655 ttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatat 7026726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 2458623 - 2458573
Alignment:
Q  128 cataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  2458623 cataagctatcctagagagcttatggaaataaactgaaaacagcttatgaa 2458573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 14482126 - 14482192
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||||| ||| ||| |||||| ||||||||| |||||||||| || ||||||||||    
T  14482126 ttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 42237539 - 42237490
Alignment:
Q  75 tttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  42237539 tttttataacaaaagataaaataaagttaaattgttttcatataagctat 42237490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 169
Target Start/End: Original strand, 10722556 - 10722678
Alignment:
Q  47 tatcatataagtgcttttgtgtaagc-tatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaaga 145  Q
    |||||||||||||||| ||| ||| | ||||| ||||||||| ||||||||||  | ||||| ||||||||| ||   ||||||||| || ||||| |||    
T  10722556 tatcatataagtgcttgtgtataatcttatttatataacaaa-gataaaataaactaaaattattttcatataagtagttttcataagctgttctagaga 10722654  T
Q  146 gcttatggaaataaactgaaaaca 169  Q
    ||| |||||||||| || ||||||    
T  10722655 gctgatggaaataagctaaaaaca 10722678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 42597331 - 42597394
Alignment:
Q  52 tataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcat 115  Q
    ||||||| ||| ||| |||||||||| ||||||||| |||||||||| || |||||||||||||    
T  42597331 tataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcat 42597394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 178
Target Start/End: Original strand, 11493902 - 11494028
Alignment:
Q  52 tataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttat 151  Q
    ||||||||||| |   |||| |||||| | |||||| |||||| ||| || ||| | |||| ||||||||||||||||||  ||||  | ||||||||||    
T  11493902 tataagtgcttgttcataagttattttcacaacaaaagataaagtaaagtcaaagtttttttatatgagctattttcatacgctatcttgaagagcttat 11494001  T
Q  152 ggaaataaactgaaaacagcttatgaa 178  Q
    | || ||| ||||| ||||||||||||    
T  11494002 gaaagtaagctgaacacagcttatgaa 11494028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 30277339 - 30277254
Alignment:
Q  90 ataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||||| | || |||||||||| |||| |||| ||||||||| |||| ||| |||| |||||||||||| ||||||||| ||||||    
T  30277339 ataaaatgaagtcaaattgtttt-atataagctgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatg 30277254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 12972753 - 12972858
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatg 118  Q
    ||||||||||||| ||| ||||||   ||||||||||||||||| ||| ||||||||||  |||||| | ||| ||||||  ||||| || |||||| |     
T  12972753 ttaattaagcgcttatagcataagcatttatcatataagtgcttatgtataagctatttcaataacagaagatgaaataaaattaaactggtttcatgta 12972852  T
Q  119 agctat 124  Q
    ||||||    
T  12972853 agctat 12972858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 39268570 - 39268513
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactg-aaaacagcttat 175  Q
    |||| ||||||||| || ||||| ||||||||||||||||||||| ||||||||||||    
T  39268570 agctgttttcataagcttttctagagagcttatggaaataaactgaaaaacagcttat 39268513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 8908996 - 8909052
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||| |||||||||| |||| ||||  |||||||||||||||||| ||||||    
T  8908996 taagctattgttataacaaaagatataatatagttaaattgttttcatataagctat 8909052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 14949875 - 14949927
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||||||| |||| |||||||| |||| ||||||| ||||||||||||||||    
T  14949875 ttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatg 14949927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 16211010 - 16210954
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||| ||||  |||||||||||||| |||| ||||||||||||| ||||||    
T  16211010 taagctatttctatagtaaatgataaaataaagttacattgttttcatataagctat 16210954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 31884493 - 31884596
Alignment:
Q  21 aattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgag 120  Q
    |||||||| || ||| |||||| | |||||||| |||||| | ||| |||| ||||| |||||||||  ||||||| |  || |||||||||||||| ||    
T  31884493 aattaagcacttatagcataagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataag 31884592  T
Q  121 ctat 124  Q
    ||||    
T  31884593 ctat 31884596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 40280376 - 40280281
Alignment:
Q  21 aattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    ||||||||||| ||| ||  || | ||||||||||||||| | | | |||| ||||| || |||||| |||||||||| || ||||||||||||||    
T  40280376 aattaagcgcttatagcaatagcgcttatcatataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaattgttttcata 40280281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 6918946 - 6918992
Alignment:
Q  37 cataagagattatcatataagtgcttttgtgtaagctatttttataa 83  Q
    |||||| | ||||||||||||||||| ||| ||||||||||||||||    
T  6918946 cataagtgtttatcatataagtgcttatgtataagctatttttataa 6918992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 20672696 - 20672762
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||||| |||||| ||  ||| ||||||||| |||||||||| || ||| ||||||    
T  20672696 ttatcatataagtgcttatgtgtatgccctttatataacaaaagataaaataaagtcaaactgtttt 20672762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 34788573 - 34788495
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||| |||||  || |||||||||||||| || || |||||||||| || ||| ||||| ||||| ||||||    
T  34788573 ttatcatataaatgcttacgtataagctatttttatgaccaaagataaaataaagtcaaactgtttccatataagctat 34788495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 39866777 - 39866743
Alignment:
Q  142 aagagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||||||||| |||||||||||||||||||||||    
T  39866777 aagagcttatgaaaataaactgaaaacagcttatg 39866743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 37444554 - 37444485
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    ||||| |||| ||| |||||||||  ||||||||| |||||| ||| |||||||||||||| ||| ||||    
T  37444554 ataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcgtataagct 37444485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 42215370 - 42215313
Alignment:
Q  121 ctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||||||||||  |||| ||  |||||||||| |||||| ||||||||||||||||||    
T  42215370 ctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaa 42215313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 2364642 - 2364558
Alignment:
Q  23 ttaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaatt 107  Q
    ||||||||| ||| |||||| | ||||||||||| |  || ||| || |||||||||||| |||| |||||||||| || |||||    
T  2364642 ttaagcgcttatagcataagtgtttatcatataactatttatgtatacgctatttttatagcaaaagataaaataaagtcaaatt 2364558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 3537163 - 3537099
Alignment:
Q  60 cttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||| ||||| |||| |||| |||| |||||||||| || ||||||||||| ||| ||||||    
T  3537163 cttttgtataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctat 3537099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 6950346 - 6950382
Alignment:
Q  139 ctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  6950346 ctaaagagcttatggaaataagctgaaaacaacttat 6950382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 11183573 - 11183605
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||||||||| |||||||||||||||    
T  11183573 agagcttatggaaataagctgaaaacagcttat 11183605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 31862502 - 31862554
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    |||||||||  ||| ||| |||||||||| |||||| ||||||||||||||||    
T  31862502 ttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 35298624 - 35298572
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||||||||| ||| ||||||||||   ||||||| ||||||||||    
T  35298624 ttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataa 35298572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 35374493 - 35374441
Alignment:
Q  72 ctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||| |||| | || |||||||||| |||||||||||||||||| ||||||    
T  35374493 ctatttctatagcgaaagataaaataaagttaaattgttttcatataagctat 35374441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 22684689 - 22684530
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatg 118  Q
    ||||||||  ||| |||||||| | | ||||||||||| ||||| ||| |||||||||| ||||||||| | |||||||| || |||||||||||||||     
T  22684689 ttaattaattgcttataccatatgcgcttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatata 22684590  T
Q  119 agctattttcataatctat-tc-taaagagcttatggaaataaactgaaaacagcttatg 176  Q
    |||| || |||||| |||| || | |||||||||  ||||||| ||||||||||||||||    
T  22684589 agctgttctcataagctatatcttgaagagcttaaagaaataagctgaaaacagcttatg 22684530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 47800581 - 47800683
Alignment:
Q  73 tatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaacagct 172  Q
    ||||| ||||||||| |||||||||| |||||| ||||||  ||| |||| ||||||||| ||||  | ||||||||||| |||||| |||||||| |||    
T  47800581 tatttctataacaaaagataaaataaagttaaaatgtttttgtataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaaccgct 47800680  T
Q  173 tat 175  Q
    |||    
T  47800681 tat 47800683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 42322003 - 42321954
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||    
T  42322003 taagctatttttataacaaatgataaaataaagtcaaattgttttcatat 42321954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 176
Target Start/End: Complemental strand, 54325183 - 54325046
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttca-------tatgagctattttcataatctatt 138  Q
    ||||||||||||||||| ||| ||| |||||| ||| ||||| |||||||||| || ||| ||||||||       ||| ||||||||||| || ||||     
T  54325183 ttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatc 54325084  T
Q  139 ctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
     |  |||| ||||||| |||||||||||||||||||||    
T  54325083 atggagagtttatggagataaactgaaaacagcttatg 54325046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 17884000 - 17884058
Alignment:
Q  54 taagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||  |||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  17884000 taagtgctcatgtgtaagctatttctataacaaaagataaaataaagttaaattgtttt 17884058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 30024624 - 30024702
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||||| ||| ||  |||| ||||| ||||||||| |||||||||| || ||||||||||||||| ||||||    
T  30024624 ttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctat 30024702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 51556013 - 51555948
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttt 111  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| |||||||||| || | |||||||    
T  51556013 ttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtcagattgttt 51555948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 173
Target Start/End: Original strand, 21157692 - 21157826
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta-------ttttcataatctatt 138  Q
    ||||||||||||||||| ||| | ||||||||| ||||||||  ||||| ||| || ||| ||||||||| | |||||       ||||||||  ||||     
T  21157692 ttatcatataagtgcttatgtatcagctattttgataacaaagtataaactaaagtcaaactgttttcatgtaagctataagatgttttcatatgctatc 21157791  T
Q  139 ctaaagagcttatggaaataaactgaaaacagctt 173  Q
    || |||||||||||||||||| || ||||||||||    
T  21157792 ctgaagagcttatggaaataagctaaaaacagctt 21157826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 485978 - 486057
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||||| ||| |||||| | |||||||| |||||||| ||| || ||||||| || |||||| ||||||||||    
T  485978 ttaattaagcgcttatagcataagcgcttatcataaaagtgcttatgtatatgctatttctaaaacaaaagataaaataa 486057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 1404351 - 1404414
Alignment:
Q  51 atataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttca 114  Q
    |||||| ||||||| | |||||||||| ||||| ||| ||||||||||||| ||||||||||||    
T  1404351 atataaatgcttttttataagctatttctataataaaagataaaataaggtcaaattgttttca 1404414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 4191663 - 4191734
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgat-aaaataaggttaaattgttttcata 116  Q
    ||||||||||||||||| ||| |||||||||| ||||||||| ||| ||||||| || ||| ||||||||||    
T  4191663 ttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 31851400 - 31851439
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaatt 107  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  31851400 taagctatttttataacaaatgataaaataaagttaaatt 31851439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 49219063 - 49219200
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat-------tttcataatctatt 138  Q
    ||||||||| |||| ||  || |||| ||||| |||||||||  ||||||||| || ||||| ||||||||| ||||||       |||||||| ||||     
T  49219063 ttatcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatc 49219162  T
Q  139 ctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
     ||||||| |||||||||||| ||||||||| ||||||    
T  49219163 ttaaagagattatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 51117059 - 51117008
Alignment:
Q  125 tttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||||||| ||||||  |||||||||||||||||| |||||||||||||||    
T  51117059 tttcataatttattctgtagagcttatggaaataaattgaaaacagcttatg 51117008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 1137722 - 1137788
Alignment:
Q  125 tttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaatatttcgtaagat 191  Q
    |||||||| |||| | | ||||||||||||||||||||||||||| |||||||| || || ||||||    
T  1137722 tttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagat 1137788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 8422982 - 8422907
Alignment:
Q  47 tatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||| |||||| ||| |||||||||||||||| ||| |||||||||| ||   ||||||||||||| ||||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagt--cattgttttcatataagctat 8422907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 14011158 - 14011293
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta-------ttttcataatctatt 138  Q
    ||||||||||| || || ||| ||||||| |||||||||||| |||||||||| | ||||||| ||  |||| |||||       ||| ||||| ||||     
T  14011158 ttatcatataaatgattgtgtataagctagttttataacaaaagataaaataaaggtaaattggttatatataagctacaaaatgtttacataagctatc 14011257  T
Q  139 ctaaagagcttatggaaataaactgaaaacagctta 174  Q
     |  ||||||||||||||||| ||||||||||||||    
T  14011258 ttggagagcttatggaaataagctgaaaacagctta 14011293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 18019981 - 18020030
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagctt 173  Q
    ||||||||| |||| ||| |||| ||||||||||||||||||||||||||    
T  18019981 ttttcataagctatgctagagagtttatggaaataaactgaaaacagctt 18020030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 4471068 - 4471156
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaatt 107  Q
    ||||||||  ||| ||| ||||||  ||||| |||||||||||| ||  ||| |||||||||||||||| |||||||||| | ||||||    
T  4471068 ttaattaactgcttatagcataagcaattattatataagtgcttatgcataaactatttttataacaaaagataaaataaaggtaaatt 4471156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 43505902 - 43505946
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||    
T  43505902 taagctatttttatagcaaaagataaaataacgttaaattgtttt 43505946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 25409810 - 25409881
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||| ||||| ||| |||| |||||   ||| ||| ||||| |||||||||||||||||||||||    
T  25409810 ttatcatataactgcttatgtctaaggtatttcattaaaaaaagataagataaggttaaattgttttcatat 25409881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 30338727 - 30338660
Alignment:
Q  57 gtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||| ||| ||| |||||| ||||||||| |||| ||||| |||||| ||||||||||| ||||||    
T  30338727 gtgcttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctat 30338660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 46796915 - 46796994
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    |||||||| | || ||| |||||| | ||||||||||||| ||| ||  ||||||||||| |||||||| ||||||||||    
T  46796915 ttaattaatcacttataacataagtgcttatcatataagttcttatgcataagctattttcataacaaacgataaaataa 46796994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 47970245 - 47970292
Alignment:
Q  49 tcatataagtgcttttgtgtaagctatttttataacaaatgataaaat 96  Q
    |||||||||||||| ||| |||||||||| ||||||||| ||||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaat 47970292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 51630058 - 51630113
Alignment:
Q  69 aagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||| |||| |||| |||||||||| ||||||||||||| |||| ||||||    
T  51630058 aagctatttatatagcaaaagataaaataaagttaaattgttttgatataagctat 51630113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 55437430 - 55437346
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataa 132  Q
    |||||||||||| | || | | |||||||||| ||||||||   ||||||||| || ||||| ||||||||| ||||||||||||||    
T  55437430 ttatcatataagcgattatctataagctatttctataacaat--ataaaataaagtcaaattattttcatataagctattttcataa 55437346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 2980626 - 2980576
Alignment:
Q  37 cataagagattatcatataagtgcttttgtgtaagctatttttataacaaa 87  Q
    |||||| | ||||||||||||||||| ||| |||||||||| |||||||||    
T  2980626 cataagtgtttatcatataagtgcttatgtataagctatttctataacaaa 2980576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 20105496 - 20105435
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaatat 181  Q
    |||| |||| |||| ||||||| ||||||||||| |||||| ||||||| |||||||||||||    
T  20105496 agctgtttttataaactattctgaagagcttatgtaaataagctgaaaa-agcttatgaatat 20105435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 21043296 - 21043242
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    ||||||||| |||| || |||||| |||| ||||| |||||||||||||||||||    
T  21043296 ttttcataagctatcctgaagagcatatgaaaatacactgaaaacagcttatgaa 21043242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 28623218 - 28623272
Alignment:
Q  51 atataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaa 105  Q
    |||||||||||| ||| |||| ||||| ||||||||| |||||||||| ||||||    
T  28623218 atataagtgcttatgtataagttatttatataacaaaagataaaataatgttaaa 28623272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 32066555 - 32066478
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||| ||||||||||| ||| ||| ||| |||||||||||| ||||||||||  |||||  || ||||||||||||||    
T  32066555 ttatcgtataagtgcttatgtataaactacttttataacaaaagataaaataa-attaaaccgtgttcatatgagctat 32066478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 35405975 - 35406021
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttatgaatatttcgtaag 189  Q
    ||||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  35405975 agagcttatggaagtaagctgaaaacagcttatgaacatttcttaag 35406021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 41088311 - 41088373
Alignment:
Q  49 tcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttt 111  Q
    |||||||||||||| ||| ||| ||||||| | |||||| |||||||||| || |||||||||    
T  41088311 tcatataagtgcttatgtataaactattttcacaacaaaagataaaataaagtaaaattgttt 41088373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 5219648 - 5219575
Alignment:
Q  44 gattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||||||||||  ||| || ||||| | ||||| ||| |||||||||| |||||| | |||||||||    
T  5219648 gattatcatataagtgctcatgtatatgctatctctataataaaagataaaataaagttaaactattttcatat 5219575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 7022585 - 7022662
Alignment:
Q  39 taagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||||| || ||||||||||||||   | |||||||||||||||| ||| |||||||||  || ||||| ||||||||    
T  7022585 taagagtttctcatataagtgcttaattataagctatttttataagaaaagataaaatagagtcaaattattttcata 7022662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 10192234 - 10192279
Alignment:
Q  72 ctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||    
T  10192234 ctatttttataacaaaagatagaataaagtcaaattgttttcatat 10192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 19429737 - 19429770
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||||||||||||||| ||||||||||||||||    
T  19429737 agagcttatggaaataagctgaaaacagcttatg 19429770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 27043943 - 27043898
Alignment:
Q  79 tataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||| |||||||||| |||||||||||||| ||| ||||||    
T  27043943 tataacaaaggataaaataaagttaaattgttttcgtataagctat 27043898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 50745931 - 50745976
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    |||| ||||| ||| |||||||||||||||||||| ||||||||||    
T  50745931 ataaatgcttatgtctaagctatttttataacaaaagataaaataa 50745976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 52170110 - 52170061
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||||||| ||  |||||||||||| |||||||||| |||||||    
T  52170110 taagctatttttattactcatgataaaataaagttaaattgtattcatat 52170061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 54069538 - 54069497
Alignment:
Q  71 gctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||||| |||| |||||||||| |||||||||||||    
T  54069538 gctatttttatatcaaaagataaaataatgttaaattgtttt 54069497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 3155549 - 3155593
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||    
T  3155549 taagctatttctatagcaaaagataaaataaagttaaattgtttt 3155593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 29388560 - 29388604
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||| ||||||||||||| ||||| |||| |||||||||||||    
T  29388560 taagctctttttataacaaaagataagataacgttaaattgtttt 29388604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 39438674 - 39438618
Alignment:
Q  54 taagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtt 110  Q
    ||||||||  |||||||||||||| ||||||| | |||||||||| || ||||||||    
T  39438674 taagtgctcatgtgtaagctatttctataacataagataaaataaagtcaaattgtt 39438618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 39603571 - 39603527
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||  |||| |||||||||| |||||||||||||    
T  39603571 taagctatttttatgtcaaaagataaaataacgttaaattgtttt 39603527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 41336707 - 41336750
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||    
T  41336707 taagctatttttatagcaaa-gataaaataaagttaaattgtttt 41336750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 18962184 - 18962106
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||| ||||||||| ||| | |||||||||||||||||| |||||||||| |||||| ||||||||||| ||||||    
T  18962184 ttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctat 18962106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 35459807 - 35459911
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatg 118  Q
    |||||| ||| || ||| |||||| | |||||||||||||| |||||| |||||||||| |||| |||| |||||||||| || ||||||||||| |||     
T  35459807 ttaattcagctcttatagcataagtgtttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtata 35459906  T
Q  119 agcta 123  Q
    |||||    
T  35459907 agcta 35459911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 33267662 - 33267556
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaaga 145  Q
    ||||||||||||||||| ||| ||| |||||| |||||||||   |||||||| |||||| ||||||||||| |||| |||| |||| |||| ||  |||    
T  33267662 ttatcatataagtgcttatgtataatctatttctataacaaacagtaaaataaagttaaactgttttcatataagctgtttttataagctatgctggaga 33267563  T
Q  146 gcttatg 152  Q
    |||||||    
T  33267562 gcttatg 33267556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 32821818 - 32821870
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||||||||||    
T  32821818 ttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatg 32821870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 14209201 - 14209287
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataa 132  Q
    |||||||||||||| || ||| ||||||||||  |||||||| ||||||||||  | ||| ||||||||||| |||||||| |||||    
T  14209201 ttatcatataagtgtttctgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctatttccataa 14209287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 22681304 - 22681192
Alignment:
Q  73 tatttttataacaaatgataaaataaggttaaattgttttcatatgagctat-------tttcataatctattctaaagagcttatggaaataaactgaa 165  Q
    |||||||| |||||| ||||||| || |  ||||||||||||||| ||||||       ||||||||||||| ||| ||| ||||||||||||| || ||    
T  22681304 tatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaa 22681205  T
Q  166 aacagcttatgaa 178  Q
    |||||||||||||    
T  22681204 aacagcttatgaa 22681192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 25661082 - 25661162
Alignment:
Q  89 gataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaacag 170  Q
    ||||||||||| ||||| ||||||||| | || ||||||| ||| |||| || |||||||||||||||||| ||||||||||    
T  25661082 gataaaataag-ttaaactgttttcatgtaagttattttcgtaaactatcctgaagagcttatggaaataatctgaaaacag 25661162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 3673734 - 3673802
Alignment:
Q  49 tcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||||||| ||| | || ||||| |||||||||  ||||||||| ||||||||||||||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatat 3673802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 10190203 - 10190255
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||||||||| ||| ||| |||||||||||||||| ||||||||||    
T  10190203 ttatcatataagtgcttatgtataaactatttttataacaaaggataaaataa 10190255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 28902007 - 28902079
Alignment:
Q  52 tataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||| ||| |||||||||||||||||| | | ||||||||  ||||| ||||||||||| ||||||    
T  28902007 tataagtgcttatgtataagctatttttataacataagttaaaataaaattaaactgttttcatataagctat 28902079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 40837552 - 40837448
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaa 167  Q
    |||||||||| ||||||||| |||||| ||| || |||||||||||||||  | | |||| |||| ||||  |  ||||||||||||||||| |||||||    
T  40837552 taagctatttctataacaaaagataaattaaagtcaaattgttttcatatatgttgttttaataagctatcatgtagagcttatggaaataagctgaaaa 40837453  T
Q  168 cagct 172  Q
     ||||    
T  40837452 tagct 40837448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 3059335 - 3059286
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagctt 173  Q
    ||||||||| |||| ||| |||| ||||||||||||||||||||||||||    
T  3059335 ttttcataagctatgctagagagtttatggaaataaactgaaaacagctt 3059286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 17952847 - 17952770
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta 123  Q
    |||||||||||| |||| | | |||||||||| ||||||||| |||||||||| || ||| | ||||||||| |||||    
T  17952847 ttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagcta 17952770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 31740082 - 31739980
Alignment:
Q  69 aagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaac 168  Q
    ||||||||| |||||| || |||||||||| || ||| | ||||||||| ||||||      ||  | ||||| ||||||||||||||||| ||||||||    
T  31740082 aagctatttctataactaaagataaaataaagtcaaactattttcatataagctat------aagttgttctagagagcttatggaaataatctgaaaac 31739989  T
Q  169 agcttatga 177  Q
    |||||||||    
T  31739988 agcttatga 31739980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 1647250 - 1647298
Alignment:
Q  129 ataatctattctaaagagcttatggaaataaactgaaaacagcttatga 177  Q
    |||| ||||| || ||||||||||||||||| |||||||||||||||||    
T  1647250 ataagctattatagagagcttatggaaataagctgaaaacagcttatga 1647298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 1939456 - 1939341
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat-gagctat------tttcataatctattctaaagagcttatggaaataaa 160  Q
    |||| ||||| ||||||||| |||||||||| || ||| | ||||||||| |||||||      |||||||| |||| ||  |||||||||||||||||     
T  1939456 taagttatttctataacaaaagataaaataaagtgaaactattttcatattgagctataactgttttcataagctatactggagagcttatggaaataag 1939357  T
Q  161 ctgaaaacagcttatg 176  Q
     |||||||||||||||    
T  1939356 ttgaaaacagcttatg 1939341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 7825183 - 7825243
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttc 113  Q
    ||||||| || ||| |||||||||||||||||||| |||||| ||| |||||||| |||||    
T  7825183 ataagtgtttctgtataagctatttttataacaaaagataaagtaaagttaaatttttttc 7825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 11393549 - 11393433
Alignment:
Q  9 gataaaccggttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaatt- 107  Q
    ||||||| | |||||||||| || ||| || ||| | ||||||||||||||||| | | |||||||||| |||| |||| |||| |||||  | |||||     
T  11393549 gataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaaattc 11393450  T
Q  108 gttttcatatgagctat 124  Q
    |||||||||| ||||||    
T  11393449 gttttcatataagctat 11393433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 11410210 - 11410094
Alignment:
Q  9 gataaaccggttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaatt- 107  Q
    ||||||| | |||||||||| || ||| || ||| | ||||||||||||||||| | | |||||||||| |||| |||| |||| |||||  | |||||     
T  11410210 gataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttctatatcaaaagatataataaattcaaattc 11410111  T
Q  108 gttttcatatgagctat 124  Q
    |||||||||| ||||||    
T  11410110 gttttcatataagctat 11410094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 15305603 - 15305647
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||    
T  15305603 taagctatttttatagcaaatgataaaataatgttaaattatttt 15305647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 42420418 - 42420374
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||    
T  42420418 taagctatttttatagcaaaagataaaataacgttaaattgtttt 42420374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 4026748 - 4026807
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||| | | ||||||||||||||| |||| |||||||||| |||||||| ||||    
T  4026748 ataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttt 4026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 29729842 - 29729917
Alignment:
Q  39 taagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttca 114  Q
    |||| ||||||| |||||||||||  || || ||||||||||||||||| |||||| ||| || ||| ||||||||    
T  29729842 taagtgattatcgtataagtgcttacgtatatgctatttttataacaaaagataaattaaagtgaaactgttttca 29729917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 36114350 - 36114409
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||| | | | |||||||||||| ||||| |||||||||| |||||||||||||    
T  36114350 ataagtgcttatatattagctatttttatgacaaaagataaaataaagttaaattgtttt 36114409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 7871647 - 7871705
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatga 177  Q
    |||| ||||||||| || || | |||||||||||||||||| ||||||||| |||||||    
T  7871647 agctgttttcataagctcttttgaagagcttatggaaataagctgaaaacaccttatga 7871705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 10198541 - 10198487
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||| ||||||||| ||| |||| |||||||||||| |||| |||||||||||||    
T  10198541 tttttataatctatcctagagagattatggaaataagctgacaacagcttatgaa 10198487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 41817172 - 41817222
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaaca 169  Q
    |||||||||||||| |||| ||  ||||||||||||||||| |||||||||    
T  41817172 agctattttcataaactatcctggagagcttatggaaataagctgaaaaca 41817222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 44606234 - 44606164
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||| ||||||||| || ||| ||||||||||| |||||||| |||||||||| |   |||||||||||||    
T  44606234 ttattatataagtgtttatgtataagctattttcataacaaaagataaaataaagaccaattgttttcata 44606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 3102580 - 3102669
Alignment:
Q  9 gataaaccggttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||| | || |||||||||| | | |||||  | ||||||||||| ||||| ||| ||||||||||||||| ||||  |||||||||    
T  3102580 gataaacagctttattaagcgcttaaaacataaatgtttatcatataactgcttatgtataagctatttttatagcaaaatataaaataa 3102669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 178
Target Start/End: Complemental strand, 3235523 - 3235391
Alignment:
Q  51 atataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttt----tca--tatgagctattttcataatctattctaaag 144  Q
    |||||||||||| ||| | ||||||||||||||||||||| ||||||| || ||| |||||    | |  ||| |||| ||||||||  ||||  | ||     
T  3235523 atataagtgcttatgtattagctatttttataacaaatga-aaaataaagtcaaactgtttcatataaactataagctgttttcatatactatcttgaaa 3235425  T
Q  145 agcttatggaaataaactgaaaacagcttatgaa 178  Q
    || |||||||||||| ||||||||||||||||||    
T  3235424 agtttatggaaataagctgaaaacagcttatgaa 3235391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 5998826 - 5998789
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaa 105  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  5998826 taagctatttttataacaaaagataaaataaagttaaa 5998789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 11344425 - 11344360
Alignment:
Q  51 atataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||||||||||| ||  |||| ||||| ||||||||| ||||||| || || ||||||||||||||    
T  11344425 atataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcata 11344360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 16551880 - 16551827
Alignment:
Q  145 agcttatggaaataaactgaaaacagcttatgaatatttcgtaagatctttcca 198  Q
    ||||||||||||||| ||||| ||| |||||| |||| || |||||||||||||    
T  16551880 agcttatggaaataagctgaatacaacttatgtatatgtcataagatctttcca 16551827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 28803652 - 28803575
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta 123  Q
    ||||||||||||||||| | | |||| |||||  |||||||| |||||||||| || ||| || |||||||| |||||    
T  28803652 ttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagcta 28803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 29316914 - 29316853
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttca 114  Q
    |||||| ||| ||| |||||||| | | ||||| | ||||||||||||||||||||||||||    
T  29316914 ataagtacttatgtctaagctatatctttaacagaagataaaataaggttaaattgttttca 29316853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 33197385 - 33197320
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttt 111  Q
    ||||||||||||||||| | | |||||||||| ||||||||| |||| ||||| || || ||||||    
T  33197385 ttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaagttgttt 33197320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 1160782 - 1160750
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||||||||||||||||||| |||||    
T  1160782 agagcttatggaaataaactgaaaacaacttat 1160750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 5045295 - 5045251
Alignment:
Q  54 taagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    |||||| || ||| |||||||||||||||||||| ||||||||||    
T  5045295 taagtgtttatgtataagctatttttataacaaaagataaaataa 5045251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 11063220 - 11063252
Alignment:
Q  142 aagagcttatggaaataaactgaaaacagctta 174  Q
    |||||||||||||||||| ||||||||||||||    
T  11063220 aagagcttatggaaataagctgaaaacagctta 11063252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 13736359 - 13736303
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    |||| ||||||||| |||| ||| |||||||||| ||||||  ||||||||||||||    
T  13736359 agctgttttcataagctatactagagagcttatgaaaataacttgaaaacagcttat 13736303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 31461363 - 31461423
Alignment:
Q  47 tatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaatt 107  Q
    ||||||||||||| || | | |||||||||| ||||||||| |||||||||| || |||||    
T  31461363 tatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaatt 31461423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 31561877 - 31561833
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||| | ||||| |||||||||||||| |||||||||||||    
T  31561877 taagctatatctataataaatgataaaataaagttaaattgtttt 31561833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 43141880 - 43141932
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||||||| |||| || ||||| ||||||||||||| |||||||| ||||||    
T  43141880 ttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatg 43141932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 43279651 - 43279607
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| |||| |||||||||| || ||||||||||    
T  43279651 taagctatttttatatcaaaagataaaataatgtgaaattgtttt 43279607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 43808501 - 43808576
Alignment:
Q  47 tatcatataagtgcttttgtgtaagcta-tttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    ||||||||||||| || ||| ||||||| |||||||||||||  ||||||||| |||||| | ||||||||| ||||    
T  43808501 tatcatataagtgtttatgtataagctattttttataacaaa-cataaaataaagttaaactattttcatataagct 43808576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 44443251 - 44443295
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaata 97  Q
    |||||||||| ||| |||||||||||||| ||||| |||||||||    
T  44443251 ataagtgcttatgtataagctatttttattacaaaagataaaata 44443295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 45229458 - 45229502
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||| |||| |||| |||||||| |||||||||||||||    
T  45229458 taagctatttctatagcaaacgataaaatgaggttaaattgtttt 45229502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 27140417 - 27140539
Alignment:
Q  54 taagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatgg 153  Q
    |||||| || |||||||| ||||| ||||||||| ||||||||||  |||||||||||| |||| |||| |||| |||| ||||  |  ||||||||||     
T  27140417 taagtgtttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataagctgtttttataagctatcatggagagcttatgc 27140516  T
Q  154 aaataaactgaaaacagcttatg 176  Q
    |||||| ||||||||| ||||||    
T  27140517 aaataagctgaaaacaacttatg 27140539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 29794105 - 29793988
Alignment:
Q  9 gataaaccggttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattg 108  Q
    ||||||| | ||||||||||||| ||| |||||| | || ||||||| ||| || ||| || ||||||||| ||||||| |||||||||| || ||||||    
T  29794105 gataaacagcttaattaagcgcttatagcataagtgtttttcatatatgtgtttatgtataggctatttttgtaacaaaagataaaataa-gtcaaattg 29794007  T
Q  109 ttttcatatgagctatttt 127  Q
    |||||| || |||||||||    
T  29794006 ttttcaaataagctatttt 29793988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 45990211 - 45990126
Alignment:
Q  39 taagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||| |||||||| || ||||  ||| || |||||||||||| |||| |||||||||| || ||||||||||||||| ||||||    
T  45990211 taagagcttatcatacaaatgctaatgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctat 45990126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 870969 - 871045
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    ||||||||||||||||| ||| ||| |||||||||||||||| |||||||| | || || || ||||||||| ||||    
T  870969 ttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttttcatataagct 871045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 37593808 - 37593691
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatg 152  Q
    ||||||| || ||| |||| ||||| ||||||| | |||||||||| |||| ||||||||| |||        ||||||| ||||| | |||||||||||    
T  37593808 ataagtgtttatgtataaggtatttctataacacaagataaaataatgttagattgttttcgtat--------ttcataagctattttgaagagcttatg 37593717  T
Q  153 gaaataaactgaaaacagcttatgaa 178  Q
     |||||| ||||||||||||||||||    
T  37593716 aaaataagctgaaaacagcttatgaa 37593691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 37841944 - 37842000
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||  |||||||||||||||||||| |||||||||||||| ||| ||||||    
T  37841944 taagctattcctataacaaatgataaaataaagttaaattgttttcgtataagctat 37842000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 7274094 - 7274015
Alignment:
Q  37 cataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||||| | ||||||||||| ||||| ||| || | ||||||||||||||| ||| |||||| || ||||||||||||||    
T  7274094 cataagtgcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcata 7274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 10744241 - 10744364
Alignment:
Q  55 aagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatgga 154  Q
    |||||||  ||| ||||||||||| || | ||| |||||||||| ||| |||||||||| ||| |||| ||||||||| || |  || ||| |||||  |    
T  10744241 aagtgctaatgtataagctattttgatgaaaaaagataaaataaagttgaattgttttcctataagctgttttcataagctgtcttagagaacttataaa 10744340  T
Q  155 aataaactgaaaacagcttatgaa 178  Q
    |||||  |||||||||||||||||    
T  10744341 aataagatgaaaacagcttatgaa 10744364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 34619517 - 34619458
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||| ||||| ||| ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  34619517 ataattgcttatgtataagccatttctataacaaaagataaaataaggttaaattgtttt 34619458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 4200153 - 4200231
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||| |||||| || | | |||| ||||||||||||||| |||||||||| || || |||||||||||| ||||||    
T  4200153 ttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctat 4200231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 5047150 - 5047212
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaatat 181  Q
    |||| ||||||||| ||||  | |||||||||||||||||| ||||||||||| |||||||||    
T  5047150 agcttttttcataagctatcatgaagagcttatggaaataagctgaaaacagcgtatgaatat 5047212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 44032145 - 44032067
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||||||| || ||| |||||  ||| ||||||||| | |||||||| || ||||||||||||||| ||||||    
T  44032145 ttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctat 44032067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 48748728 - 48748659
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||||||||| |||||| ||| |||||||||| |||| |||| ||| |||||| |||||||||||||||||    
T  48748728 ttatcatatatgtgcttatgtataagctatttctata-caaaagatgaaataaagttaaattgttttcata 48748659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 49557065 - 49557143
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||||||||  ||| |||| ||||| ||||||||| |||||||||| ||||||| || ||||| | ||||||    
T  49557065 ttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctat 49557143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 51929841 - 51929783
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatga 177  Q
    |||| ||||||||| |||||||| ||||||||||||||||| | |||| ||||||||||    
T  51929841 agctgttttcataagctattctagagagcttatggaaataagccgaaatcagcttatga 51929783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 23895260 - 23895373
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaaga 145  Q
    |||||||||||||  || ||| |||||||||| ||||||||| ||||||||||  | ||| |||| ||||||  |||||||| |||| ||||  |  |||    
T  23895260 ttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaaactgttctcatatatgctatttttataaactatcttggaga 23895359  T
Q  146 gcttatggaaataa 159  Q
    |||| |||||||||    
T  23895360 gcttgtggaaataa 23895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 37416837 - 37416874
Alignment:
Q  147 cttatggaaataaactgaaaacagcttatgaatatttc 184  Q
    |||||||||||||||||||||||||||||||| |||||    
T  37416837 cttatggaaataaactgaaaacagcttatgaacatttc 37416874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 44236705 - 44236612
Alignment:
Q  18 gttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttt 111  Q
    ||||||||||| || ||| |||||| | |||||| ||||||| || |||  ||||||||  |||||||||||||||||||| ||| || |||||    
T  44236705 gttaattaagcacttatagcataagtgcttatcacataagtgtttgtgtagaagctattcctataacaaatgataaaataaagttgaactgttt 44236612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 6933105 - 6933037
Alignment:
Q  48 atcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||| |||||||||  ||| ||||| ||||||||||||||  ||||||||| || ||||||||||||||    
T  6933105 atcaaataagtgctcatgtataagccatttttataacaaaacataaaataaagtcaaattgttttcata 6933037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 43029472 - 43029412
Alignment:
Q  115 tatgagctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    |||||| ||||||||||| |||||||  | ||||||||||||||| ||||||| |||||||    
T  43029472 tatgaggtattttcataagctattctttaaagcttatggaaataagctgaaaatagcttat 43029412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 2522596 - 2522683
Alignment:
Q  82 aacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaaca 169  Q
    |||||| |||||||||| |||||| || ||| |||| |||| ||||||||| |||||||  |||  ||||||||||||  ||||||||    
T  2522596 aacaaaagataaaataaagttaaactgattttatataagctgttttcataaactattctggagaatttatggaaataagttgaaaaca 2522683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 6279405 - 6279460
Alignment:
Q  121 ctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    |||||||||||| |||| ||| ||||||||||||||||  ||||||||| ||||||    
T  6279405 ctattttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatg 6279460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 6292497 - 6292556
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||||||||| ||| ||||| |  |||||||||| |||||| ||||||||||||||||||    
T  6292497 agctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaa 6292556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 7262579 - 7262525
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    ||||||||| |||| || |||||||| |||||||||  |||||||||||||||||    
T  7262579 ttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaa 7262525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 15687196 - 15687142
Alignment:
Q  69 aagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta 123  Q
    ||||||||| |||||||||  ||||||||| |||||||||||||| ||| |||||    
T  15687196 aagctatttctataacaaaatataaaataaagttaaattgttttcgtataagcta 15687142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 36070199 - 36070237
Alignment:
Q  71 gctatttttataacaaatgataaaataaggttaaattgt 109  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  36070199 gctatttttataacaaaagataaaataaagttaaattgt 36070237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 38651555 - 38651485
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    ||||||| ||||||||| ||| ||||||| || ||||||||| |||||| ||| ||  |||||||||||||    
T  38651555 ttatcatgtaagtgcttatgtataagctaattctataacaaaagataaactaaagtcgaattgttttcata 38651485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 112
Target Start/End: Complemental strand, 46499996 - 46499934
Alignment:
Q  50 catataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||| | | |||||||||| ||||| ||| |||||||||| || ||||||||||    
T  46499996 catataagtgcttatctataagctatttctataagaaaagataaaataaagtcaaattgtttt 46499934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 49516966 - 49517072
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttt-tgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||| ||| | | |||||| | ||||||||||| |  ||| ||| |||| ||||| ||||||||| |||||||||| || ||||||||||||| |    
T  49516966 ttaattaagtgcttaaaacataagcgtttatcatataaattgtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcattt 49517065  T
Q  118 gagctat 124  Q
     ||||||    
T  49517066 aagctat 49517072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 5941571 - 5941522
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||| |||||| |||||||||||| || ||| |||||||||||    
T  5941571 taagctattttgataacagatgataaaataaagtcaaactgttttcatat 5941522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 8852806 - 8852851
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttc 113  Q
    ||||||||||||| |||||| |||||||||| |||| |||||||||    
T  8852806 taagctatttttacaacaaaagataaaataaagttatattgttttc 8852851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 13037791 - 13037836
Alignment:
Q  49 tcatataagtgcttttgtgtaagctatttttataacaaatgataaa 94  Q
    |||||||||||||| ||| |||||||||| ||||||||| ||||||    
T  13037791 tcatataagtgcttatgtataagctatttctataacaaaagataaa 13037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 26184776 - 26184809
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||||||||||||||| ||||||||||||||||    
T  26184776 agagcttatggaaataatctgaaaacagcttatg 26184809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 28083353 - 28083308
Alignment:
Q  122 tattttcataatctattctaaagagcttatggaaataaactgaaaa 167  Q
    |||| ||||||||||| |||||||||||||| |||||| |||||||    
T  28083353 tattatcataatctatcctaaagagcttatgaaaataagctgaaaa 28083308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 115
Target Start/End: Complemental strand, 40358032 - 40357963
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcat 115  Q
    |||| |||||||||  | ||| |||||||||| ||||||||  |||||||||| || |||||||||||||    
T  40358032 ttattatataagtgactatgtataagctatttctataacaatggataaaataaagtcaaattgttttcat 40357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 43722219 - 43722154
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaatatttcgtaag 189  Q
    ||||||||| |||||||| |||||||||  ||||||||||| || ||||||| || || |||||||    
T  43722219 ttttcataagctattctagagagcttattaaaataaactgagaaaagcttataaacatgtcgtaag 43722154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 45170466 - 45170401
Alignment:
Q  50 catataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcat 115  Q
    ||||||||||||| | |  ||||||||||||||||||| |||| ||||| ||| |||||| |||||    
T  45170466 catataagtgcttatttagaagctatttttataacaaaagatagaataaagttcaattgtcttcat 45170401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 219594 - 219558
Alignment:
Q  142 aagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||||||||||||||| | ||||||||||||||||||    
T  219594 aagagcttatggaaatgagctgaaaacagcttatgaa 219558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 3215730 - 3215782
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||| ||| |||||||||||| |||||| | |||||||||||||| ||||||    
T  3215730 ttttcctaagctattctaaagaacttatgaacataaactgaaaacaacttatg 3215782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 6074420 - 6074476
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||| ||||||||| ||| | |||| |||||| ||||||||||| ||||||    
T  6074420 taagctatttctataacaaaagatgatataaagttaaactgttttcatataagctat 6074476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 10586492 - 10586440
Alignment:
Q  72 ctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||| |||||| ||| |||||||||| || ||||||||||||||||| ||||    
T  10586492 ctattattataagaaaagataaaataaagtaaaattgttttcatatgaactat 10586440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 14737829 - 14737781
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||| ||||| ||||||||| |||||||||| || ||||||||||||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 17269177 - 17269245
Alignment:
Q  49 tcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||||||| ||| |||| ||||| || |||||| |  ||||||| || |||||||||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatat 17269245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 17830100 - 17830136
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaa 104  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  17830100 taagctatttttatagcaaatgataaaataaagttaa 17830136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 41184770 - 41184730
Alignment:
Q  72 ctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||| |||| |||||||||| |||||||||||||    
T  41184770 ctatttttatagcaaaagataaaataatgttaaattgtttt 41184730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 45145172 - 45145216
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| |||| ||||||||||  ||||||||||||    
T  45145172 taagctatttttatagcaaaagataaaataatattaaattgtttt 45145216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 46252803 - 46252767
Alignment:
Q  71 gctatttttataacaaatgataaaataaggttaaatt 107  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  46252803 gctatttttataacaaaagataaaataaagttaaatt 46252767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 47432042 - 47432086
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||    
T  47432042 taagctatttttatagaaaaagataaaataaagttaaattgtttt 47432086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 48748358 - 48748322
Alignment:
Q  142 aagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  48748358 aagagcttatggaaataagctgaaaacaacttatgaa 48748322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 50319238 - 50319286
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||||||||| ||||||||| |||||||||| || || |||||||||||    
T  50319238 taagctatttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 42809247 - 42809325
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagag 146  Q
    |||||||||| ||||||||| |||||||||  |||||||||||||||||| |||| ||||||| |||||| ||| ||||    
T  42809247 taagctatttctataacaaaagataaaatatagttaaattgttttcatataagctgttttcatcatctatcctagagag 42809325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 25964366 - 25964418
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  25964366 ttatcatataagttcttttgtataagctatttttataacaaaagataaaataa 25964418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 22232750 - 22232821
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||| ||||  ||| |||||||||| |||||||||||||||||||| || ||| |||||||||||    
T  22232750 ttatcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatat 22232821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 27792789 - 27792872
Alignment:
Q  39 taagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    |||||| ||||||||||||||||| ||| ||||||||||  | |||||| ||||||||||||| ||| | ||||||||| ||||    
T  27792789 taagagtttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagct 27792872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 36200015 - 36200094
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    |||| |||||||| ||| |||||||| ||||||||||||| ||| ||| | |||||||| | ||||||||||||||||||    
T  36200015 ttaaataagcgcttataacataagagcttatcatataagttcttatgtatcagctatttatgtaacaaatgataaaataa 36200094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 178
Target Start/End: Complemental strand, 2128375 - 2128265
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaa 167  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||  | | |||| ||||||||| | ||  |  ||| | |||| |||||| |||||||    
T  2128375 taagctatttctataacaaaagataaaataaagttaaattgttttactgtaagctgttttcataagccatcttttagaacgtatgaaaataagctgaaaa 2128276  T
Q  168 cagcttatgaa 178  Q
    |||||||||||    
T  2128275 cagcttatgaa 2128265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 16790502 - 16790432
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    ||||||||||||||||| ||| |||||||||||||||||||  ||||||||||  | ||||| ||||||||    
T  16790502 ttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcata 16790432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 44374790 - 44374720
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    ||||||||||||||||| ||| |||||||| | | ||||||| |||||||||| || ||||||||||||||    
T  44374790 ttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 15304471 - 15304422
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  15304471 taagctatttctataacaaaagataaaataaagttaaattgttttcatat 15304422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 37689508 - 37689452
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||||||||||||| |||||| ||| |||||||| ||||||||| ||||||    
T  37689508 taagctatttttataacaaaagataaagtaaagttaaattattttcatataagctat 37689452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 42808925 - 42808989
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataa 132  Q
    |||||| ||| ||||||||| |||||||||| ||||||||||||| |||| |||| |||||||||    
T  42808925 taagctgtttctataacaaaagataaaataaagttaaattgtttttatataagctgttttcataa 42808989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 38462205 - 38462342
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta-------ttttcataatctatt 138  Q
    |||||||||||||| || | | |||||||||| |||| |||| |||||||||| || ||| |||||||||||  ||||       ||||||||| ||||     
T  38462205 ttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatc 38462304  T
Q  139 ctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    | | | ||||||||||||||| ||||||||| ||||||    
T  38462305 caagatagcttatggaaataagctgaaaacaacttatg 38462342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 41028997 - 41028918
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctatt 125  Q
    ||||||||||||||||| ||| |||||||||| ||||||||| || ||||||| || ||  |||||||| || |||||||    
T  41028997 ttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataagctatt 41028918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 44284217 - 44284134
Alignment:
Q  33 ataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    |||||||||| ||||||||||||||| ||  ||| |||||||||| |||||||||  |||||| || || ||| ||||||||||    
T  44284217 ataccataagcgattatcatataagtactaatgtataagctatttctataacaaaaaataaaacaaagtcaaactgttttcata 44284134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 178
Target Start/End: Original strand, 20669125 - 20669235
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaaa 167  Q
    |||||||||| ||||||||   ||| ||||| || ||| |||| |||||| |||| ||||||||| ||||  |  |||||||||| |||||| | |||||    
T  20669125 taagctatttctataacaagatatacaataaagtcaaaatgttgtcatataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaa 20669224  T
Q  168 cagcttatgaa 178  Q
    |||||||||||    
T  20669225 cagcttatgaa 20669235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 10101600 - 10101551
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||| ||||| ||||||||| |||||||||| ||||||||||||||||||    
T  10101600 taagttatttctataacaaaagataaaataaagttaaattgttttcatat 10101551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 10212525 - 10212476
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||| ||||| ||||||||| |||||||||| ||||||||||||||||||    
T  10212525 taagttatttctataacaaaagataaaataaagttaaattgttttcatat 10212476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 25459768 - 25459642
Alignment:
Q  47 tatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagag 146  Q
    |||||| ||||||||||||| ||| ||||| |||||||||| ||||| |||| | |||| | ||||||||| || | ||||||||| ||||   | ||||    
T  25459768 tatcatgtaagtgcttttgtataaactattgttataacaaa-gataatataaagataaactattttcatataag-ttttttcataagctatctcagagag 25459671  T
Q  147 cttatggaaataaactgaaaacagcttatg 176  Q
    ||| ||||||||| || |||||||||||||    
T  25459670 cttgtggaaataagct-aaaacagcttatg 25459642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 30322081 - 30322024
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaatat 181  Q
    |||||||||  ||| |||||||||||||||||||||| |||| ||||||||| |||||    
T  30322081 ttttcataagttatcctaaagagcttatggaaataaattgaacacagcttataaatat 30322024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 34414902 - 34414793
Alignment:
Q  67 gtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataaactgaaa 166  Q
    |||| |||||||||| |||| || |||||| | |||||||||||| | || || |||||||||||| ||||  |  |||| ||||| |||||| ||||||    
T  34414902 gtaaactatttttatgacaagtggtaaaattaagttaaattgtttccgtacgaactattttcataaactatcatggagagtttatgaaaataagctgaaa 34414803  T
Q  167 acagcttatg 176  Q
    ||| ||||||    
T  34414802 acaacttatg 34414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 49465796 - 49465751
Alignment:
Q  59 gcttttgtgtaagctatttttataacaaatgataaaataaggttaa 104  Q
    |||| |||||||||||||||||||||||| |||||||||| |||||    
T  49465796 gcttatgtgtaagctatttttataacaaaagataaaataaagttaa 49465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 52618949 - 52618998
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||| || |||||||||| |||||| ||||||||||||||||||    
T  52618949 taagctatttctaaaacaaatgattaaataaagttaaattgttttcatat 52618998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 44061147 - 44061103
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||| |||| |||| ||||||||||||||||||||||||    
T  44061147 taagctatttctatagcaaaagataaaataaggttaaattgtttt 44061103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 45433059 - 45433007
Alignment:
Q  72 ctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||| ||||| ||| |||||||| | |||||||||||||||||||||||||    
T  45433059 ctatttctataagaaaagataaaatgaagttaaattgttttcatatgagctat 45433007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 49546625 - 49546581
Alignment:
Q  54 taagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||    
T  49546625 taagtgcttatgtgtaagatatttttataacaaaagataaaataa 49546581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 49587040 - 49586984
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||| ||||||||| |||||||||| || ||| ||||||||||| ||||||    
T  49587040 taagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 905115 - 905040
Alignment:
Q  47 tatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    ||||||||||| ||||  || |||||||||| ||||||||| |||||||||| || || |||||| ||||| ||||    
T  905115 tatcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaatttgtttgcatataagct 905040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 13371127 - 13371177
Alignment:
Q  125 tttcataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    |||||||| ||||| | |||||||||||||||||| ||||||||| |||||    
T  13371127 tttcataagctattatgaagagcttatggaaataagctgaaaacaacttat 13371177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 25183134 - 25183056
Alignment:
Q  47 tatcatataagtgcttt-tgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||||| ||  ||| ||| |||||||||||||||| ||| |||||| |||||  | ||||||||||||||||    
T  25183134 tatcatataagtgtttaatgtataaactatttttataacaaaagattaaataaagttaagctattttcatatgagctat 25183056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 26330461 - 26330386
Alignment:
Q  45 attatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    ||||||||||||||| || ||||  || ||||||||||||||| || | ||||| || |||||||| |||||||||||    
T  26330461 attatcatataagtgattatgtg--agttatttttataacaaaagacagaataaagtcaaattgttatcatatgagct 26330386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 28779280 - 28779358
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||| ||||||||| |||||| |||||||||||   ||| |||||| || ||| | ||||||||| ||||||    
T  28779280 ttatcatataattgcttttgtataagctgtttttataacatcagatgaaataaagtcaaactattttcatataagctat 28779358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 32703062 - 32703140
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||||||| || || ||| |||||||||| ||| | ||| ||||||||||  | ||||||||||||||| ||||||    
T  32703062 ttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctat 32703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 169
Target Start/End: Complemental strand, 34924608 - 34924554
Alignment:
Q  115 tatgagctattttcataatctattctaaagagcttatggaaataaactgaaaaca 169  Q
    |||||||||||||||||| ||||  || |||||||||| |||||| |||||||||    
T  34924608 tatgagctattttcataagctatcttagagagcttatgaaaataagctgaaaaca 34924554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 39971243 - 39971309
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||||| ||| |||| || || ||||||||| |||||||||| |  ||||||||||    
T  39971243 ttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaattgtttt 39971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 43116574 - 43116524
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaat 96  Q
    |||||||| ||||| || |||||||||||||| ||||||||| ||||||||    
T  43116574 ttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaat 43116524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Complemental strand, 48933642 - 48933604
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttatgaatat 181  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  48933642 agagcttatggaaatcaactgaaaaaagcttatgaatat 48933604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 16790243 - 16790182
Alignment:
Q  37 cataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    |||||| | ||||||||||||||||| | | |||| ||||| ||||||||| ||||||||||    
T  16790243 cataagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataa 16790182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 20504100 - 20504185
Alignment:
Q  10 ataaaccggttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaa 95  Q
    |||||| | ||||||||||||| |||  ||||  | ||||||| ||||||||| ||  ||||||| || |||||||||||||||||    
T  20504100 ataaacagcttaattaagcgcttatagtataaaggcttatcatttaagtgcttatgcctaagctacttctataacaaatgataaaa 20504185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 23315639 - 23315676
Alignment:
Q  128 cataatctattctaaagagcttatggaaataaactgaa 165  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  23315639 cataagctattctaaagagcttatggaaataagctgaa 23315676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 28843028 - 28842971
Alignment:
Q  21 aattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttt 78  Q
    |||||||| || ||| |||||| | ||||||||||||||||| ||| |||||||||||    
T  28843028 aattaagcacttatatcataagcgcttatcatataagtgcttatgtataagctatttt 28842971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 30669094 - 30669049
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttc 113  Q
    |||||||||||||||||||| |||||||||| ||| |||| |||||    
T  30669094 taagctatttttataacaaaagataaaataatgttgaatttttttc 30669049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 34363951 - 34364020
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctat 137  Q
    |||||||||| |||||| |   ||||||||| ||  |||||||||||||| |||||||||||||| ||||    
T  34363951 taagctatttctataactacatataaaataacgtacaattgttttcatataagctattttcataagctat 34364020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 36189491 - 36189556
Alignment:
Q  47 tatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||||||  | ||| |||||||||| | | ||||| |||||||||| |||||||||||||    
T  36189491 tatcatataagtgagtatgtataagctatttctcttacaaaagataaaataaagttaaattgtttt 36189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 237406 - 237458
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    |||||||||  ||| ||| |||||||| |||||||| ||||||||||||||||    
T  237406 ttttcataagttatcctatagagcttacggaaataagctgaaaacagcttatg 237458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 20880423 - 20880466
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| |||||||||||| || |||||||||||||    
T  20880423 taagctatttttatagcaaatgataaaacaa-gttaaattgtttt 20880466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 21862347 - 21862243
Alignment:
Q  21 aattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaata-aggttaaattgttttcatatga 119  Q
    |||||||| || ||| |||||  | ||||| |||||||||||  || |||||| ||| ||| ||||| ||||||||| | || ||||||||||||||| |    
T  21862347 aattaagcacttatagcataaacgtttatcttataagtgcttgcgtataagctgtttctattacaaaagataaaatacaagtcaaattgttttcatataa 21862248  T
Q  120 gctat 124  Q
    |||||    
T  21862247 gctat 21862243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 30956750 - 30956706
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||    
T  30956750 taagctatttctatagcaaaagataaaataaagttaaattgtttt 30956706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 30972562 - 30972518
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||    
T  30972562 taagctatttctatagcaaaagataaaataaagttaaattgtttt 30972518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 35127531 - 35127451
Alignment:
Q  33 ataccataagagattatcat-ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||   ||||||| |||||||||| ||| || ||||||| ||||||||| |||| | ||| |||||||||||||    
T  35127531 ataccataagctcttatcatgataagtgcttatgtataggctatttctataacaaaagatatactaaagttaaattgtttt 35127451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 36783457 - 36783409
Alignment:
Q  69 aagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||| |||| |||| |||||||||| || |||||||||||||||    
T  36783457 aagctatttctataccaaaagataaaataaagtaaaattgttttcatat 36783409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 41644516 - 41644452
Alignment:
Q  114 atatgagctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    |||| |||| ||||||||| ||||  || ||| |||| |||||||| ||||||||||||||||||    
T  41644516 atataagctgttttcataagctatcgtagagatcttaaggaaataagctgaaaacagcttatgaa 41644452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 52412970 - 52412914
Alignment:
Q  119 agctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||||||  | | ||| ||||| ||||||||||| |||||||||||||||    
T  52412970 agctattttcataagttgtcctagagagcatatggaaataagctgaaaacagcttat 52412914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 3217344 - 3217265
Alignment:
Q  38 ataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||| ||||||||||||||||||| ||| |||||||||||| ||| | | |||||||||| || ||||| |||||||||    
T  3217344 ataagcgattatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatat 3217265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 22742281 - 22742368
Alignment:
Q  37 cataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||| | ||||| ||||||| ||| | | |||||||||| ||||||||| |||||||||| || ||||||||||||||| ||||||    
T  22742281 cataagcgcttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctat 22742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 8349837 - 8349739
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||||| ||| |||||    |||||||||||||| || ||| ||| |||||| | ||||||| |||||||||| ||||||||||||| ||||    
T  8349837 ttaattaagcgcttatagcataaccacttatcatataagtgtttgtgtataaactatttctctaacaaaagataaaataaagttaaattgtttttatat 8349739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 29274375 - 29274297
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||| || ||||| ||| |||||||||| |||| |||| |||||||||| || ||||||||||||||| ||||||    
T  29274375 ttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctat 29274297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 7351754 - 7351674
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattt 126  Q
    ||||||||||| ||||| ||| ||| |||||| ||||| |||  ||||||||| |||||| ||||||||||| ||||||||    
T  7351754 ttatcatataaatgcttatgtataaactatttatataataaactataaaataaagttaaactgttttcatataagctattt 7351674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 4006645 - 4006716
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||| ||  |||| ||||| |||||||||||||||||||| || |||||||||| |||| ||||||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctat 4006716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 7713950 - 7714025
Alignment:
Q  47 tatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagct 122  Q
    ||||||||||| |||| ||| ||| ||| ||| |||||||| |||||||||| || ||||||||||||||| ||||    
T  7713950 tatcatataagagcttatgtataaactactttcataacaaaagataaaataaagtcaaattgttttcatataagct 7714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 31624195 - 31624249
Alignment:
Q  59 gcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttc 113  Q
    |||| ||| |||||||||| ||||||||| ||||||||||| |||||||||||||    
T  31624195 gcttgtgtataagctatttctataacaaaagataaaataagtttaaattgttttc 31624249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 2034575 - 2034455
Alignment:
Q  55 aagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatgga 154  Q
    |||||||| ||| |||||| |||||| |||||| |||||||||| || ||| |  |||||||| |||| ||||||||| |||   |  ||||||||  ||    
T  2034575 aagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagcttttttcataagctaacatgtagagcttaatga 2034477  T
Q  155 aataaactgaaaacagcttatg 176  Q
    ||||| ||||||||||||||||    
T  2034476 aataagctgaaaacagcttatg 2034455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 281972 - 281858
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta-------ttttcataatctattctaaagagcttatggaaataaa 160  Q
    |||||||||  ||||||||| |||||||||| || || |||||||||||| |||||       | ||||||| |||| ||| |||||| ||||||||||     
T  281972 taagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataag 281873  T
Q  161 ctgaaaacagcttat 175  Q
    ||||||||| |||||    
T  281872 ctgaaaacaacttat 281858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 3169391 - 3169339
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||||||||| ||||||| |||||| ||||||||| ||| ||||||    
T  3169391 ttatcatataagtgcttatgtgtaacctatttctataacaaaagatgaaataa 3169339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 9093680 - 9093624
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||| ||| ||||||    
T  9093680 taagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctat 9093624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 30536424 - 30536468
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||||    
T  30536424 taagctattattatagcaaatgataaaataatgttaaattgtttt 30536468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 33259744 - 33259788
Alignment:
Q  50 catataagtgcttttgtgtaagctatttttataacaaatgataaa 94  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||    
T  33259744 catataagtgcttatgtataagctatttttataacaaaagataaa 33259788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 33911436 - 33911368
Alignment:
Q  37 cataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaa 105  Q
    |||||| |||||| ||||||||| || ||| ||| |||||||||||||||| ||| |||||| ||||||    
T  33911436 cataagtgattataatataagtgtttatgtataatctatttttataacaaaagatcaaataaagttaaa 33911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 1497904 - 1497979
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataa-caaatgataaaataaggttaaattgttttcatatgag 120  Q
    ||||||| ||||||||| ||| |||||||||||| ||| |||| | |||||||| || ||| ||||||||||||||    
T  1497904 ttatcatttaagtgcttatgtttaagctatttttttaaccaaaaggtaaaataaagtcaaactgttttcatatgag 1497979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 4325454 - 4325403
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaata 97  Q
    ||||||||||||||||| ||| |||| ||||| ||||| |||||||||||||    
T  4325454 ttatcatataagtgcttatgtctaagttatttctataataaatgataaaata 4325403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 4420671 - 4420706
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttatgaa 178  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4420671 agagcttatggaaataagctgaaaacagcttatgaa 4420706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 31668832 - 31668781
Alignment:
Q  45 attatcatataagtgcttttgtgtaagctatttttataacaaatgataaaat 96  Q
    |||||||||||||||||| ||| |||||||||| |||||||||  |||||||    
T  31668832 attatcatataagtgcttatgtataagctatttctataacaaaacataaaat 31668781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 32386270 - 32386115
Alignment:
Q  21 aattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgag 120  Q
    |||||||| || |||  |||| || ||||||||||||||||| ||| ||||||||||   | | ||| |||||||||| || ||| |||||| |||| ||    
T  32386270 aattaagcacttatagtataaaagtttatcatataagtgcttatgtataagctatttcacttagaaaagataaaataaagtaaaactgtttttatataag 32386171  T
Q  121 ctattttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    || ||||||| |  ||| ||  | |||||||| || ||| ||||||||| ||||||    
T  32386170 ctgttttcattagttatcctggaaagcttatgaaagtaagctgaaaacaacttatg 32386115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 32386709 - 32386638
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||||||||| ||| ||  ||||||   ||| ||| ||||||||||||| |||||||||||||||    
T  32386709 ttatcatataagtgcttatgtatagactatttcactaagaaaagataaaataaggtcaaattgttttcatat 32386638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 32578098 - 32578059
Alignment:
Q  44 gattatcatataagtgcttttgtgtaagctatttttataa 83  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  32578098 gattatcatataagtgcttatgtgtaagctatttctataa 32578059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 264302 - 264380
Alignment:
Q  53 ataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcata 131  Q
    |||||||||| | | |||||||||| || | |||| |||||||||| ||||||| |||||| | | |||||||||||||    
T  264302 ataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttcgtctaagctattttcata 264380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 2514626 - 2514704
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctat 124  Q
    ||||||| ||||||||| ||| |||||||||| ||||| ||| |||||||||| || ||| |  ||| |||||||||||    
T  2514626 ttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctat 2514704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 6536968 - 6537010
Alignment:
Q  136 attctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||    
T  6536968 attctgaagagcttatggaaataagctgaaaacaacttatgaa 6537010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 20512704 - 20512654
Alignment:
Q  125 tttcataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    |||||||| ||||| | |||||||||||||||||| ||||||||| |||||    
T  20512704 tttcataagctattatgaagagcttatggaaataagctgaaaacaacttat 20512654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 29269820 - 29269886
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||| ||||| ||| ||| |||||| ||||||| | |||||||||| || ||||||||||    
T  29269820 ttatcatataaatgcttgtgtataaactatttctataacagaagataaaataaagtcaaattgtttt 29269886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 30523586 - 30523722
Alignment:
Q  47 tatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagcta------ttttcataatctattct 140  Q
    |||||||||||||| | ||| | || |||||| ||||||||||||||||||| || |||| || ||||||| |||||      ||||||||| |||| ||    
T  30523586 tatcatataagtgcgtatgtcttagttatttt-ataacaaatgataaaataatgtcaaatcgtcttcatataagctataagttttttcataagctatcct 30523684  T
Q  141 aaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
      |||| |||| ||||| |  |||||||||||||||||    
T  30523685 tgagaggttatagaaattagttgaaaacagcttatgaa 30523722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 33416318 - 33416360
Alignment:
Q  55 aagtgcttttgtgtaagctatttttataacaaatgataaaata 97  Q
    |||||||| ||| |||||||||||||||||||| |||||||||    
T  33416318 aagtgcttatgtataagctatttttataacaaaagataaaata 33416360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 34403864 - 34403918
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatgaa 178  Q
    ||||||||| || | |||||||||||||||||||||  |||||||| ||||||||    
T  34403864 ttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaa 34403918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 2027530 - 2027481
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||||||||||||||||||| |||||||||| || ||| | |||||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatat 2027481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 2206487 - 2206592
Alignment:
Q  19 ttaattaagcgctgataccataagagattatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatg 118  Q
    ||||||||| ||| ||| ||||||   ||||| ||||||   || ||| |||| ||||||||||||||| |||||||||| ||  ||||||||| ||||     
T  2206487 ttaattaagtgcttatagcataagctcttatcgtataagcatttctgtataagttatttttataacaaaagataaaataaagtataattgtttttatata 2206586  T
Q  119 agctat 124  Q
    ||||||    
T  2206587 agctat 2206592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 13360659 - 13360782
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata-------tgagctattttcataatctatt 138  Q
    ||||||||||||||||| |||| || |||||| |||||||||  ||||||||| || ||   |||||||||       | || |||||| |||| ||||     
T  13360659 ttatcatataagtgcttatgtgcaaactatttctataacaaaatataaaataaagtcaagcagttttcatacgagtcgtaagttattttgataaactatc 13360758  T
Q  139 ctaaagagcttatggaaataaact 162  Q
    ||||| ||||||||||||||||||    
T  13360759 ctaaaaagcttatggaaataaact 13360782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 25103340 - 25103287
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatga 177  Q
    |||||||||  ||| |||||||||||| | |||||||||||||||| |||||||    
T  25103340 ttttcataagatatcctaaagagcttaagaaaataaactgaaaacaacttatga 25103287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 28621227 - 28621190
Alignment:
Q  75 tttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  28621227 tttttataacaaaagataaaataaagttaaattgtttt 28621190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 8147648 - 8147692
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| |||| |||||||||| ||| |||||||||    
T  8147648 taagctatttttatagcaaaagataaaataaagttgaattgtttt 8147692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 18076142 - 18076186
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    |||| |||||||||| |||| || |||||||||||||||||||||    
T  18076142 taagttatttttatagcaaaagagaaaataaggttaaattgtttt 18076186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 28660879 - 28660835
Alignment:
Q  73 tatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||||||||||  |||||||||| |||||||| |||||||||    
T  28660879 tatttttataacaatagataaaataaagttaaattattttcatat 28660835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 30536682 - 30536638
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgtttt 112  Q
    ||||||||||||||| |||| ||||| |||| |||||||||||||    
T  30536682 taagctatttttatagcaaaagataagataacgttaaattgtttt 30536638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 21402 - 21333
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctat 137  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||| ||| |||| ||||||||| ||||    
T  21402 taagctatttttataggaaaagataaaataaagttaaattgttttcgtataagctgttttcataagctat 21333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 58879 - 58947
Alignment:
Q  64 tgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataa 132  Q
    |||||||||||||||||||  ||| | |||||||| |||||||||||||| ||| |||| |||||||||    
T  58879 tgtgtaagctatttttataggaaaagttaaaataaagttaaattgttttcgtataagctgttttcataa 58947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 27500 - 27571
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    ||||||| ||||||||| ||| |||| ||||| ||||||| | |||||||||| || |||||||||||||||    
T  27500 ttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatat 27571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 3832 - 3876
Alignment:
Q  50 catataagtgcttttgtgtaagctatttttataacaaatgataaa 94  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||    
T  3832 catataagtgcttatgtgtaagctatttttataacaaaagataaa 3876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 63431 - 63379
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    ||||||||||||||||| | | |||||||||||||||||||| ||||||||||    
T  63431 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataa 63379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 1219 - 1168
Alignment:
Q  47 tatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    |||||||||||||||| ||| |||||||||| ||||||||| ||||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataa 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 2756 - 2807
Alignment:
Q  47 tatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataa 98  Q
    |||||||||||||||| ||| |||||||||| ||||||||| ||||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataa 2807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 51514 - 51563
Alignment:
Q  68 taagctatttttataacaaatgataaaataaggttaaattgttttcatat 117  Q
    |||| |||||||||||||||  ||||||||| ||||||||||||||||||    
T  51514 taagttatttttataacaaaatataaaataaagttaaattgttttcatat 51563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 160034 - 159983
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||| |||| ||||||||||| ||||||||| |||||||| ||||||    
T  160034 ttttcataagctatcctaaagagcttgtggaaataagctgaaaactgcttat 159983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 6783 - 6713
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    ||||||||||||||||| ||| ||| |||||| |||||||||  ||||| | | || ||||||||||||||    
T  6783 ttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcata 6713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 33687 - 33637
Alignment:
Q  125 tttcataatctattctaaagagcttatggaaataaactgaaaacagcttat 175  Q
    |||||||| ||||| | |||||||||||||||||| ||||||||| |||||    
T  33687 tttcataagctattatgaagagcttatggaaataagctgaaaacaacttat 33637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 116702 - 116632
Alignment:
Q  46 ttatcatataagtgcttttgtgtaagctatttttataacaaatgataaaataaggttaaattgttttcata 116  Q
    ||||||||||||||||| ||| ||| |||||| |||||||||  ||||| | | || ||||||||||||||    
T  116702 ttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcata 116632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 6536 - 6504
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||||||||||||||||||| |||||    
T  6536 agagcttatggaaataaactgaaaacaacttat 6504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 175
Target Start/End: Complemental strand, 13556 - 13524
Alignment:
Q  143 agagcttatggaaataaactgaaaacagcttat 175  Q
    ||||||||||||||||||||||||||| |||||    
T  13556 agagcttatggaaataaactgaaaacaacttat 13524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 306335 - 306387
Alignment:
Q  124 ttttcataatctattctaaagagcttatggaaataaactgaaaacagcttatg 176  Q
    ||||||||| |||| ||| |||||||||| || ||| ||||||||||||||||    
T  306335 ttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatg 306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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