View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11896_low_28 (Length: 218)
Name: NF11896_low_28
Description: NF11896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11896_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 10760311 - 10760108
Alignment:
| Q |
2 |
gtgaaatcgagggaggtagaaggggtggatggatgaaataattagggaggtaaagataatggaagataagacaaccacaatagtgaaccagaagaatgtg |
101 |
Q |
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| T |
10760311 |
gtgaaatcgagggaggtagaaggggtggatggatgaaataattagggaggtaaagataatggaagataagacaaccacaatagtgaaccaaaagaatgtg |
10760212 |
T |
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| Q |
102 |
ctccatgaaatggctctgctatgttttctatgatctttcatgagagaaacccaaaacgagaagaaaaatgtaatagtaatgttctttgggttgcttcatc |
201 |
Q |
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| T |
10760211 |
ctccatgaaatggctctgctatgttttctatgatctttcatgagagaaacccaaaacgagaagaaaaatgtaatagtaatgttctttgggttgcttcatg |
10760112 |
T |
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| Q |
202 |
tcac |
205 |
Q |
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|||| |
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| T |
10760111 |
tcac |
10760108 |
T |
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