View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11897_high_15 (Length: 422)
Name: NF11897_high_15
Description: NF11897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11897_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 34 - 403
Target Start/End: Original strand, 38916779 - 38917148
Alignment:
| Q |
34 |
cgtaaaaacgaaagaaacgaagaatatttttattaaaaacccatagagaaagttcttcatccaagggtttatctttttaccacagagcctttgcccattc |
133 |
Q |
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| T |
38916779 |
cgtaaaaacgaaagaaacgaagaatatttttattaaaaacccatagagaaagttcttcatccaagggtttatctttttaccacagagcctttgcccattc |
38916878 |
T |
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| Q |
134 |
taaaaagcattctgtgcctttacctaactgcttgatagattccaactgcaactaaataattggtcattcaaccttctaattatgatcccattcccgttta |
233 |
Q |
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| T |
38916879 |
taaaaagcattctgtgcctttacctaactgcttgatagattccaactgcaactaaataatcggtcattcaaccttctaattatgatcccattcccgttta |
38916978 |
T |
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| Q |
234 |
tttcttatgggtcctgtcacaatttgaatttttattttattttatccttcaaggatggattcagaagcgcctaataaaaatgtacgtagactgctgcaag |
333 |
Q |
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| T |
38916979 |
tttcttctgggtgctgtcacaatttgaatttttattttattttatccttcaaggatggattcagaagcgcctaataaaaatgtacgtagactgctgcaag |
38917078 |
T |
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| Q |
334 |
gggttgtctgtggaaccaaagatcaaggtgctgaagaaactttacaatttacaggtgagaaggatcctag |
403 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38917079 |
gggttgtctgtggaaccaaagatcaaggtgctgaagaaactttacaatttacaggtgagaaggatcctag |
38917148 |
T |
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