View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11898_low_19 (Length: 231)
Name: NF11898_low_19
Description: NF11898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11898_low_19 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 35210316 - 35210515
Alignment:
| Q |
15 |
atgaatgaaggggatgtgtatatgtattttctctcgaacgtccatgatagtcatcgttaacaaaagtccaactagtgatttatggttggcaagaggctat |
114 |
Q |
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| T |
35210316 |
atgaatgaaggggatgtgtatatgtattttctctcgaacgtccatgatagtcattgttaacaaaagtccaactagtgatttatggttggcaagaggctat |
35210415 |
T |
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| Q |
115 |
gaagggttgataaatgaattttgttaaattcatagaaggtttatttgttaaggtggtctggtgcatagaaagatcaacta-gttcagttgagacatgatg |
213 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
35210416 |
gaaggggtgataaatgaattttgttaaattcatagaaggtttatttgttaaggtggtctggtgcatagaaagatcaactaggttcagttgagacatgatg |
35210515 |
T |
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