View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11898_low_5 (Length: 611)

Name: NF11898_low_5
Description: NF11898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11898_low_5
NF11898_low_5
[»] chr7 (36 HSPs)
chr7 (15-181)||(35523280-35523445)
chr7 (386-554)||(35522617-35522767)
chr7 (300-366)||(35522809-35522875)
chr7 (177-259)||(21766840-21766922)
chr7 (212-263)||(24164349-24164400)
chr7 (212-265)||(41320362-41320415)
chr7 (213-261)||(10336484-10336532)
chr7 (212-260)||(31849762-31849810)
chr7 (212-260)||(39102799-39102847)
chr7 (212-259)||(36508065-36508112)
chr7 (212-270)||(11638346-11638404)
chr7 (212-265)||(2765056-2765109)
chr7 (212-260)||(6607636-6607684)
chr7 (212-260)||(6626532-6626580)
chr7 (212-260)||(21438606-21438654)
chr7 (212-256)||(24000287-24000331)
chr7 (212-260)||(26174957-26175005)
chr7 (212-260)||(38816237-38816285)
chr7 (212-260)||(47403848-47403896)
chr7 (212-260)||(48863510-48863558)
chr7 (213-260)||(39384712-39384759)
chr7 (218-260)||(19276639-19276681)
chr7 (212-262)||(35193316-35193366)
chr7 (212-258)||(38567833-38567879)
chr7 (212-258)||(47913486-47913532)
chr7 (212-260)||(1795440-1795488)
chr7 (212-260)||(5850839-5850887)
chr7 (202-266)||(6607876-6607940)
chr7 (202-266)||(6626160-6626224)
chr7 (218-266)||(8952411-8952459)
chr7 (212-260)||(17356603-17356651)
chr7 (212-260)||(18732990-18733038)
chr7 (212-260)||(21276335-21276383)
chr7 (212-260)||(31657753-31657801)
chr7 (202-258)||(47913121-47913177)
chr7 (19-53)||(35517805-35517839)
[»] chr2 (33 HSPs)
chr2 (212-271)||(11108396-11108455)
chr2 (212-262)||(32504346-32504396)
chr2 (212-266)||(40691649-40691703)
chr2 (212-265)||(34826049-34826102)
chr2 (212-260)||(430884-430932)
chr2 (212-260)||(2098630-2098678)
chr2 (212-260)||(4902963-4903011)
chr2 (212-260)||(9776971-9777019)
chr2 (213-261)||(42814322-42814370)
chr2 (212-270)||(970427-970485)
chr2 (177-260)||(4902623-4902706)
chr2 (177-260)||(4950021-4950104)
chr2 (212-258)||(18478658-18478704)
chr2 (212-258)||(18707495-18707541)
chr2 (212-261)||(32927709-32927758)
chr2 (213-265)||(4831484-4831536)
chr2 (212-260)||(14827861-14827909)
chr2 (212-260)||(16265585-16265633)
chr2 (221-265)||(19591437-19591481)
chr2 (212-260)||(33850453-33850501)
chr2 (212-260)||(45002845-45002893)
chr2 (202-265)||(5673990-5674053)
chr2 (218-260)||(32654187-32654229)
chr2 (212-261)||(9791559-9791608)
chr2 (212-260)||(41186611-41186659)
chr2 (212-262)||(8031384-8031434)
chr2 (212-258)||(28625832-28625878)
chr2 (202-260)||(41186249-41186307)
chr2 (212-265)||(39060736-39060789)
chr2 (212-260)||(3963053-3963101)
chr2 (202-270)||(14102562-14102630)
chr2 (212-256)||(14102939-14102983)
chr2 (237-265)||(25251503-25251531)
[»] chr1 (38 HSPs)
chr1 (212-268)||(45950895-45950951)
chr1 (212-269)||(2930952-2931009)
chr1 (212-264)||(1342428-1342480)
chr1 (212-266)||(1366638-1366692)
chr1 (202-263)||(30056924-30056985)
chr1 (212-261)||(39524268-39524317)
chr1 (212-265)||(47647853-47647906)
chr1 (212-260)||(23253325-23253373)
chr1 (212-260)||(28838468-28838516)
chr1 (212-264)||(32486855-32486907)
chr1 (212-260)||(38717695-38717743)
chr1 (212-267)||(28486986-28487041)
chr1 (212-259)||(32005715-32005762)
chr1 (212-259)||(37351298-37351345)
chr1 (212-262)||(5132696-5132746)
chr1 (212-270)||(25378972-25379030)
chr1 (212-269)||(36302419-36302476)
chr1 (212-260)||(6782926-6782974)
chr1 (212-260)||(47672000-47672048)
chr1 (213-261)||(49628126-49628174)
chr1 (212-263)||(14556013-14556064)
chr1 (212-266)||(2730731-2730785)
chr1 (218-260)||(36465936-36465978)
chr1 (212-258)||(38872874-38872920)
chr1 (212-260)||(17077326-17077374)
chr1 (212-260)||(39758951-39758999)
chr1 (220-260)||(39759293-39759333)
chr1 (212-260)||(39764305-39764353)
chr1 (212-260)||(40124781-40124829)
chr1 (212-260)||(44519340-44519388)
chr1 (212-260)||(50755657-50755705)
chr1 (212-259)||(39950563-39950610)
chr1 (212-262)||(52346227-52346277)
chr1 (212-260)||(5904813-5904862)
chr1 (212-261)||(15875179-15875227)
chr1 (218-259)||(44396060-44396101)
chr1 (202-266)||(1342788-1342852)
chr1 (216-260)||(38459363-38459407)
[»] chr8 (25 HSPs)
chr8 (212-266)||(27696690-27696744)
chr8 (212-261)||(9855306-9855355)
chr8 (212-263)||(7050890-7050941)
chr8 (177-265)||(10837161-10837249)
chr8 (212-260)||(30794807-30794855)
chr8 (212-260)||(32923724-32923772)
chr8 (212-260)||(34181497-34181545)
chr8 (212-260)||(41441414-41441462)
chr8 (212-257)||(2056723-2056768)
chr8 (212-265)||(2232727-2232780)
chr8 (212-260)||(2705504-2705552)
chr8 (212-260)||(4528981-4529029)
chr8 (212-260)||(17696610-17696658)
chr8 (212-260)||(26695771-26695819)
chr8 (212-260)||(42216621-42216669)
chr8 (212-262)||(43857461-43857511)
chr8 (212-273)||(17696966-17697027)
chr8 (212-260)||(7230335-7230383)
chr8 (202-265)||(4528636-4528699)
chr8 (202-265)||(10496045-10496108)
chr8 (202-268)||(42686015-42686081)
chr8 (212-269)||(7678606-7678663)
chr8 (202-263)||(9855662-9855723)
chr8 (212-260)||(10495722-10495770)
chr8 (212-260)||(37406237-37406285)
[»] chr3 (33 HSPs)
chr3 (203-265)||(44638620-44638682)
chr3 (212-264)||(16222842-16222894)
chr3 (212-263)||(23461196-23461247)
chr3 (212-260)||(35565042-35565090)
chr3 (212-260)||(47358150-47358198)
chr3 (212-260)||(51754262-51754310)
chr3 (212-258)||(26050499-26050545)
chr3 (212-262)||(31705464-31705514)
chr3 (212-260)||(3017537-3017585)
chr3 (212-260)||(21441303-21441351)
chr3 (212-260)||(29352404-29352452)
chr3 (212-260)||(34682279-34682327)
chr3 (212-260)||(44398241-44398289)
chr3 (178-267)||(47982356-47982445)
chr3 (178-267)||(47991643-47991732)
chr3 (178-267)||(48000930-48001019)
chr3 (178-267)||(48010217-48010306)
chr3 (212-262)||(27957458-27957508)
chr3 (220-266)||(33092349-33092395)
chr3 (213-259)||(51761134-51761180)
chr3 (212-265)||(16732283-16732336)
chr3 (212-265)||(38443312-38443365)
chr3 (212-261)||(55328803-55328852)
chr3 (213-265)||(26920945-26920997)
chr3 (212-260)||(40037009-40037057)
chr3 (237-269)||(51760813-51760845)
chr3 (212-260)||(54089840-54089888)
chr3 (212-264)||(54803369-54803421)
chr3 (212-259)||(19988233-19988280)
chr3 (218-260)||(51436998-51437040)
chr3 (219-257)||(52836632-52836670)
chr3 (212-261)||(21560797-21560846)
chr3 (237-265)||(40791166-40791194)
[»] chr6 (23 HSPs)
chr6 (212-265)||(9565991-9566044)
chr6 (212-265)||(16120576-16120629)
chr6 (212-267)||(2793027-2793082)
chr6 (202-260)||(3199307-3199365)
chr6 (212-266)||(22695549-22695603)
chr6 (212-260)||(14631095-14631143)
chr6 (212-264)||(17203861-17203913)
chr6 (212-260)||(33360447-33360495)
chr6 (213-260)||(33706167-33706214)
chr6 (212-258)||(6535745-6535791)
chr6 (177-260)||(10143211-10143294)
chr6 (212-262)||(33243167-33243217)
chr6 (212-261)||(1827055-1827104)
chr6 (212-261)||(21905424-21905473)
chr6 (212-260)||(5997193-5997241)
chr6 (212-260)||(12395663-12395711)
chr6 (218-260)||(6389912-6389954)
chr6 (218-260)||(21003143-21003185)
chr6 (212-260)||(605477-605525)
chr6 (212-260)||(16120401-16120449)
chr6 (212-255)||(32219211-32219254)
chr6 (212-262)||(16409106-16409156)
chr6 (202-263)||(21002765-21002826)
[»] chr5 (28 HSPs)
chr5 (212-265)||(15442984-15443037)
chr5 (212-261)||(8343394-8343443)
chr5 (212-269)||(25945320-25945377)
chr5 (177-270)||(5907250-5907343)
chr5 (212-264)||(9176954-9177006)
chr5 (212-260)||(20166431-20166479)
chr5 (209-261)||(22619446-22619498)
chr5 (212-260)||(26408637-26408685)
chr5 (212-260)||(27858388-27858436)
chr5 (212-260)||(39412484-39412532)
chr5 (202-260)||(23910295-23910353)
chr5 (177-264)||(27858637-27858724)
chr5 (212-265)||(16969050-16969103)
chr5 (212-265)||(18036587-18036640)
chr5 (212-260)||(973826-973874)
chr5 (212-260)||(2268227-2268275)
chr5 (212-258)||(18705525-18705571)
chr5 (218-260)||(23592480-23592522)
chr5 (212-265)||(4716813-4716866)
chr5 (212-261)||(5214602-5214651)
chr5 (212-257)||(13197912-13197957)
chr5 (212-260)||(13198249-13198297)
chr5 (212-260)||(23592817-23592865)
chr5 (212-260)||(32792363-32792411)
chr5 (213-260)||(18673910-18673957)
chr5 (212-265)||(11062683-11062736)
chr5 (202-263)||(30492194-30492255)
chr5 (212-260)||(17964649-17964697)
[»] chr4 (40 HSPs)
chr4 (212-265)||(42496294-42496347)
chr4 (212-266)||(32328055-32328109)
chr4 (212-270)||(49263864-49263922)
chr4 (212-265)||(13198968-13199021)
chr4 (212-261)||(23205698-23205747)
chr4 (212-261)||(46008987-46009036)
chr4 (212-265)||(53940709-53940762)
chr4 (212-260)||(322011-322059)
chr4 (212-272)||(13086619-13086678)
chr4 (212-260)||(15168913-15168961)
chr4 (212-260)||(40147351-40147399)
chr4 (202-258)||(43980130-43980186)
chr4 (212-260)||(45311196-45311244)
chr4 (212-260)||(51892663-51892711)
chr4 (213-268)||(43561800-43561855)
chr4 (212-263)||(52096907-52096958)
chr4 (212-270)||(919168-919226)
chr4 (212-258)||(10616464-10616510)
chr4 (212-262)||(41965504-41965554)
chr4 (212-261)||(5813771-5813820)
chr4 (212-265)||(39210621-39210674)
chr4 (212-261)||(45848637-45848686)
chr4 (212-260)||(888067-888115)
chr4 (212-260)||(8445022-8445070)
chr4 (212-260)||(16335056-16335104)
chr4 (212-260)||(31317592-31317640)
chr4 (212-260)||(32384095-32384143)
chr4 (212-260)||(35378024-35378072)
chr4 (202-260)||(51716479-51716537)
chr4 (212-265)||(29526244-29526297)
chr4 (209-258)||(44589028-44589077)
chr4 (212-260)||(47690292-47690340)
chr4 (202-269)||(8444648-8444715)
chr4 (202-265)||(31317253-31317316)
chr4 (213-260)||(42207867-42207913)
chr4 (202-260)||(47690646-47690704)
chr4 (202-264)||(51892987-51893049)
chr4 (212-260)||(1614274-1614322)
chr4 (212-260)||(1922827-1922875)
chr4 (212-272)||(51716109-51716169)
[»] scaffold0302 (1 HSPs)
scaffold0302 (212-261)||(14124-14173)
[»] scaffold0170 (1 HSPs)
scaffold0170 (212-260)||(5820-5868)
[»] scaffold0045 (1 HSPs)
scaffold0045 (212-260)||(35704-35752)
[»] scaffold0651 (2 HSPs)
scaffold0651 (202-260)||(6030-6088)
scaffold0651 (202-265)||(6382-6445)
[»] scaffold0079 (1 HSPs)
scaffold0079 (212-260)||(57756-57804)
[»] scaffold0044 (1 HSPs)
scaffold0044 (212-256)||(9590-9634)
[»] scaffold0015 (1 HSPs)
scaffold0015 (212-260)||(49717-49765)
[»] scaffold0009 (1 HSPs)
scaffold0009 (212-260)||(58784-58832)
[»] scaffold0275 (1 HSPs)
scaffold0275 (212-260)||(1572-1620)
[»] scaffold0036 (1 HSPs)
scaffold0036 (212-260)||(17201-17249)
[»] scaffold0421 (1 HSPs)
scaffold0421 (218-259)||(2951-2992)
[»] scaffold0185 (1 HSPs)
scaffold0185 (212-260)||(8063-8111)


Alignment Details
Target: chr7 (Bit Score: 121; Significance: 1e-61; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 15 - 181
Target Start/End: Complemental strand, 35523445 - 35523280
Alignment:
Q  15 atattgtgcaccaaactctcttgttttttgctgctgatattatgcataagccaaagtatttcttttaataacaaaagttaggatatacattgttttnnnn 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  35523445 atattgtgcaccaaactctcttgttttgtgctgctgatattatgcataagccaaagtatttcttttaataacaaaagttaggatatacattgttttaaaa 35523346  T
Q  115 nnnnnntatattactatataagttggtcatatgacgtgggtagaaaatagaatactaacttccaggg 181  Q
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35523345 aaaaaa-atattagtatataagttggtcatatgacgtgggtagaaaatagaatactaacttccaggg 35523280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 386 - 554
Target Start/End: Complemental strand, 35522767 - 35522617
Alignment:
Q  386 ggtgctattaaccaccacacattaaccaacgacaaacacacgacttgttaaattaacggatgagagacaataaatggaggagagggaaaatataagcgat 485  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||| |    
T  35522767 ggtgctattaactaccacacattaaccaacgacaaacacacgacttgttaaattaacggatgagag------------------ggaaaatataagcggt 35522686  T
Q  486 gtttacattttcaatcaaagggttgtaacgtgtcgtgcctgtttagtatcgtgccaacgagaaatatcc 554  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35522685 gtttacattttcaatcaaagggttgtaacgtgtcgtgcctgtttagtatggtgccaacgagaaatatcc 35522617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 300 - 366
Target Start/End: Complemental strand, 35522875 - 35522809
Alignment:
Q  300 tgacatataactgttatacacactcccgtgacatttaaacataaaatcctccaaaaatgccgacttt 366  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  35522875 tgacatatcactgttatacacactcccgtgacatttaaacataaaatactccgaaaatgcagacttt 35522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 21766840 - 21766922
Alignment:
Q  177 cagggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaac 259  Q
    ||||||||||||||||||       ||| || || |||||||||||||||||||||||| |||||||||||||||||||||||    
T  21766840 cagggaccaatgccaaacaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtacagggaccaatgacacatttaaac 21766922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 24164349 - 24164400
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaa 263  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  24164349 caatgccaaaatctgatgaaagtgtagggaccaatgacacatttaaaccaaa 24164400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 41320415 - 41320362
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  41320415 caatgccaaaatctgatgaaagtgcagggaccaatgacacatgtaaaccaaaaa 41320362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 10336484 - 10336532
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  10336484 aatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacca 10336532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 31849762 - 31849810
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  31849762 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 31849810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 39102847 - 39102799
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  39102847 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 39102799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 36508112 - 36508065
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaac 259  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  36508112 caatgccaaaatctgatgaaagtacaaggaccaatgacacatttaaac 36508065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 11638346 - 11638404
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaat 270  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||| | |||||||||    
T  11638346 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaatctaaaataaat 11638404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 2765109 - 2765056
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||| ||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  2765109 caataccaaaatctgatgaaagtgcagggaccaataacacatttaaaccaaaaa 2765056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 6607684 - 6607636
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  6607684 caatgccaaaatcggatgaaagtgcagggaccaatgacacatttaaacc 6607636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 6626532 - 6626580
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  6626532 caatgccaaaatcggatgaaagtgcagggaccaatgacacatttaaacc 6626580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 21438606 - 21438654
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  21438606 caatgccaaaatctgatgaaagtgcagggatcaatgacacatttaaacc 21438654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 24000287 - 24000331
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacattta 256  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  24000287 caatgccaaaatctgatgaaagtgcagggaccaatgacacattta 24000331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 26174957 - 26175005
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||    
T  26174957 caatgccaaaatctgatgaaagtgcagggacaaatgacacatttaaacc 26175005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 38816285 - 38816237
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  38816285 caattccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 38816237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 47403896 - 47403848
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  47403896 caatgccaaaatctgatgaaagtgcagggaccaatgactcatttaaacc 47403848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 48863510 - 48863558
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||    
T  48863510 caatgccaaaatctgatgaaagtgcaaggaccaatgacacatttaaacc 48863558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 39384759 - 39384712
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||    
T  39384759 aatgccaaaatctgatgaaagtgcagggaccaatgacacattcaaacc 39384712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 19276681 - 19276639
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  19276681 caaaatctgatgaaagtgcagggaccaatgacacatttaaacc 19276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 35193366 - 35193316
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    ||||||||||||| |||||||||  ||||| ||||||||||||||||||||    
T  35193366 caatgccaaaatccgatgaaagtgcagggatcaatgacacatttaaaccaa 35193316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 38567833 - 38567879
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||    
T  38567833 caatgccaaaatctgatgaaagtgcagggaccagtgacacatttaaa 38567879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 47913486 - 47913532
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||    
T  47913486 caatgccaaaatctgatgaaagtgcagggaccaataacacatttaaa 47913532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 1795488 - 1795440
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||||||||    
T  1795488 caattccaaaatttgatgaaagtgcagggaccaatgacacatttaaacc 1795440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 5850839 - 5850887
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  | ||||||| ||||||||||||||    
T  5850839 caatgccaaaatctgatgaaagtgtatggaccaacgacacatttaaacc 5850887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 6607876 - 6607940
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| |||||||||||||||    
T  6607876 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaaaaat 6607940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 6626224 - 6626160
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| |||||||||||||||    
T  6626224 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaaaaat 6626160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 8952459 - 8952411
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    |||||||||||||||||  ||||||||||||||| |||||||| |||||    
T  8952459 caaaatctgatgaaagtgcagggaccaatgacacgtttaaacctaaaat 8952411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 17356651 - 17356603
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||    
T  17356651 caatgtcaaaatttgatgaaagtgtagggaccaatgacacatttaaacc 17356603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 18732990 - 18733038
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||||||||    
T  18732990 caatgtcaaaatctgatgaaaatgcagggaccaatgacacatttaaacc 18733038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 21276383 - 21276335
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||| ||||||||||  |||||||||||| |||||||||||    
T  21276383 caatgccaaaatttgatgaaagtgcagggaccaatgatacatttaaacc 21276335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 31657753 - 31657801
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||| ||||| ||||||||||  ||||||||||||||||||||||||    
T  31657753 caatgctaaaatttgatgaaagtgcagggaccaatgacacatttaaacc 31657801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 47913177 - 47913121
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||| || |||||||||||||||||||||||  | |||||||| |||||||||||    
T  47913177 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggaccaataacacatttaaa 47913121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 35517839 - 35517805
Alignment:
Q  19 tgtgcaccaaactctcttgttttttgctgctgata 53  Q
    ||||||||||||||||||||||| |||||||||||    
T  35517839 tgtgcaccaaactctcttgttttgtgctgctgata 35517805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 11108455 - 11108396
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaata 271  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  11108455 caatgccaaaatctgatgaaagtgtagggaccaatgacacatttaaaccaaaaataaata 11108396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 32504346 - 32504396
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  32504346 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaa 32504396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 40691649 - 40691703
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  40691649 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaaaat 40691703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 34826049 - 34826102
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  34826049 caataccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaa 34826102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 430884 - 430932
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  430884 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 430932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 2098630 - 2098678
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  2098630 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 2098678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 4902963 - 4903011
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  4902963 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 4903011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 9777019 - 9776971
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9777019 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 9776971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 42814322 - 42814370
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  42814322 aatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacca 42814370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 970485 - 970427
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaat 270  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||    
T  970485 caatgccaaaatctgatgaaagtgcagggaccaattacacatttaaaccataaaaaaat 970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 4902706 - 4902623
Alignment:
Q  177 cagggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||       ||| || || ||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  4902706 cagggaccaatgccaaacaaaaaaagtgcagggaccaatgacaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 4902623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 4950104 - 4950021
Alignment:
Q  177 cagggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||       ||| || || ||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  4950104 cagggaccaatgccaaacaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 4950021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 18478658 - 18478704
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  18478658 caatgccaaaatctgatgaaagtccagggaccaatgacacatttaaa 18478704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 18707541 - 18707495
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  18707541 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 18707495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 32927758 - 32927709
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  32927758 caatgccaaaatctgatgaaagtgcagggaccaatgacatatttaaacca 32927709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 4831484 - 4831536
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||| |||||| ||||||||||  |||||||||||||||||||||||||||||    
T  4831484 aatgtcaaaatatgatgaaagtgcagggaccaatgacacatttaaaccaaaaa 4831536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 14827861 - 14827909
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||    
T  14827861 caatgccaaaatctgatgaaagtgcaaggaccaatgacacatttaaacc 14827909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 16265633 - 16265585
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  16265633 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 16265585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 19591481 - 19591437
Alignment:
Q  221 aatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  19591481 aatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaa 19591437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 33850501 - 33850453
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||    
T  33850501 caatgccaaaatctgatgaaagtgcagggaccaattacacatttaaacc 33850453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 45002893 - 45002845
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||    
T  45002893 caatgccaaaatctgatgagagtgcagggaccaatgacacatttaaacc 45002845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 5674053 - 5673990
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||| || ||||| ||||||||||| |||||  |||||||||||||||||||||||| ||||    
T  5674053 gtgtagggaccaatgtcaaaatctgataaaagtgcagggaccaatgacacatttaaacctaaaa 5673990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Original strand, 32654187 - 32654229
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  32654187 caaaatctgatgaaagtgcagggaccaatgacacatttaaacc 32654229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 9791559 - 9791608
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||| ||||||||||||||||||  ||||| |||||||||||||||||||    
T  9791559 caataccaaaatctgatgaaagtgcagggatcaatgacacatttaaacca 9791608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 41186611 - 41186659
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||||||||||||||  ||||||||| ||||||||||||||    
T  41186611 caatgtcaaaatctgatgaaagtgcagggaccaacgacacatttaaacc 41186659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 8031384 - 8031434
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    ||||| ||||||||||||||| |  | ||||||||||||||||||||||||    
T  8031384 caatgtcaaaatctgatgaaaatgcaaggaccaatgacacatttaaaccaa 8031434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 28625832 - 28625878
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    ||||| |||||||||||||||||  || |||||||||||||||||||    
T  28625832 caatgtcaaaatctgatgaaagtgcagcgaccaatgacacatttaaa 28625878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 41186307 - 41186249
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||| || |||||||||||||||||||||||  | ||||||| |||| |||||||||    
T  41186307 gtgtagagaccaatgccaaaatctgatgaaagtgcatggaccaaagacatatttaaacc 41186249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 39060736 - 39060789
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    ||||| ||||||||||| ||| |  |||||||||||||||||||||||| ||||    
T  39060736 caatgtcaaaatctgataaaattgcagggaccaatgacacatttaaacctaaaa 39060789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 3963101 - 3963053
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||| |||||||| |  ||||||||||||||||||||||||    
T  3963101 caatgtcaaaatttgatgaaaatgcagggaccaatgacacatttaaacc 3963053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 14102630 - 14102562
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaat 270  Q
    |||||| || ||||||||||||||||| |||||    |||| || |||| |||||||||||||||||||    
T  14102630 gtgtagggaccaatgccaaaatctgataaaagttcgaggactaaagacatatttaaaccaaaaataaat 14102562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 14102939 - 14102983
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacattta 256  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||    
T  14102939 caatgtcaaaatttgatgaaagtgcagggaccaatgacacattta 14102983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 265
Target Start/End: Complemental strand, 25251531 - 25251503
Alignment:
Q  237 agggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||||||||    
T  25251531 agggaccaatgacacatttaaaccaaaaa 25251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 212 - 268
Target Start/End: Complemental strand, 45950951 - 45950895
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataa 268  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  45950951 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaataa 45950895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 2931009 - 2930952
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaa 269  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||    
T  2931009 caatgccaaaatctgatgaaagtgcagggaccaatgacacaattaaaccaaaaataaa 2930952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 1342480 - 1342428
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaa 264  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  1342480 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaa 1342428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 1366638 - 1366692
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  1366638 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacccaaaat 1366692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 30056985 - 30056924
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaa 263  Q
    |||||| || |||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  30056985 gtgtagggaccaatgccaaaatctgatgaaagtgcagagaccaatgacacatttaaaccaaa 30056924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 39524317 - 39524268
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  39524317 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacca 39524268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 47647906 - 47647853
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  47647906 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaaaa 47647853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 23253373 - 23253325
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  23253373 caatgccaaaatctgatgaaagttgaaggaccaatgacacatttaaacc 23253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 28838468 - 28838516
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28838468 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 28838516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 32486907 - 32486855
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaa 264  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  32486907 caatgccaaaatctgatgaaagtgcagggactaatgacacatttaaaccaaaa 32486855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 38717695 - 38717743
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  38717695 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 38717743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 28486986 - 28487041
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaata 267  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||| ||||||    
T  28486986 caatgccaatatctgatgaaagtgcagggaccaatgacacatttaaacctaaaata 28487041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 32005715 - 32005762
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaac 259  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||    
T  32005715 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaac 32005762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 37351298 - 37351345
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaac 259  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||    
T  37351298 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaac 37351345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 5132696 - 5132746
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  5132696 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaa 5132746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 25378972 - 25379030
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaat 270  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||| | |||||||    
T  25378972 caatgccaaaatctgatgaaagtgcagggaccaatgacacattcaaacctataataaat 25379030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 36302476 - 36302419
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaa 269  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||  |||||||    
T  36302476 caatgccaaaatctgatgaaagtgcatggaccaatgacacatttaaaccttaaataaa 36302419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 6782926 - 6782974
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||    
T  6782926 caatgccaaaatctgatgaaagtgcaaggaccaatgacacatttaaacc 6782974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 47672048 - 47672000
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  47672048 caatgcctaaatctgatgaaagtgcagggaccaatgacacatttaaacc 47672000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 49628174 - 49628126
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  49628174 aatgccaaaatctgatgaaagtgcagggaccaatgacatatttaaacca 49628126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 14556064 - 14556013
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaa 263  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||| ||||    
T  14556064 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaatcaaa 14556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 2730785 - 2730731
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    ||||||||||||||||| |||||  |||||||||| ||||||||||||| |||||    
T  2730785 caatgccaaaatctgataaaagtgcagggaccaataacacatttaaacctaaaat 2730731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 36465978 - 36465936
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  36465978 caaaatctgatgaaagtgcagggaccaatgacacatttaaacc 36465936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 38872874 - 38872920
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  38872874 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaa 38872920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 17077374 - 17077326
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||| ||||||||||  | ||||||||||||||||||||||    
T  17077374 caatgccaaaatatgatgaaagtgcaaggaccaatgacacatttaaacc 17077326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 39758999 - 39758951
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  || ||||||||| |||||||||||    
T  39758999 caatgccaaaatctgatgaaagtgtagagaccaatgatacatttaaacc 39758951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Original strand, 39759293 - 39759333
Alignment:
Q  220 aaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  39759293 aaatctgatgaaagtgcagggaccaatgacacatttaaacc 39759333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 39764353 - 39764305
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  || ||||||||| |||||||||||    
T  39764353 caatgccaaaatctgatgaaagtgtagagaccaatgatacatttaaacc 39764305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 40124829 - 40124781
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||    
T  40124829 caatgtcaaaatttgatgaaagtgtagggaccaatgacacatttaaacc 40124781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 44519388 - 44519340
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||||| |  || |||||||||||||||||||||    
T  44519388 caatgccaaaatctgatgaaaatgcagagaccaatgacacatttaaacc 44519340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 50755705 - 50755657
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||   ||||||||| |||||||||||||    
T  50755705 caatgccaaaatctgatgaaagtgtcgggaccaataacacatttaaacc 50755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 39950563 - 39950610
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaac 259  Q
    |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  39950563 caatgccaaaatctgatgaaagtgcaggaacaaatgacacatttaaac 39950610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 52346277 - 52346227
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    |||||||||||||||||||||||  | |||||||| ||| |||||||||||    
T  52346277 caatgccaaaatctgatgaaagtgcatggaccaataacatatttaaaccaa 52346227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 5904862 - 5904813
Alignment:
Q  212 caatgccaaaat-ctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||| ||||| |||||  ||||||||||||||||||||||||    
T  5904862 caatgccaaaattctgataaaagtgcagggaccaatgacacatttaaacc 5904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 15875179 - 15875227
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    ||||||||||||||||| |||||  ||| |||||||||||||||||||||    
T  15875179 caatgccaaaatctgataaaagtgtagg-accaatgacacatttaaacca 15875227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 44396101 - 44396060
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaac 259  Q
    |||||||||||||||||  |||||||||| ||||||||||||    
T  44396101 caaaatctgatgaaagtgcagggaccaataacacatttaaac 44396060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 1342788 - 1342852
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| |||||||||| ||||    
T  1342788 gtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaaccataaat 1342852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 38459363 - 38459407
Alignment:
Q  216 gccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||| |||||||||||  |||||||||| |||||||||||||    
T  38459363 gccaaaaactgatgaaagtgcagggaccaattacacatttaaacc 38459407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 27696744 - 27696690
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  27696744 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaat 27696690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 9855355 - 9855306
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9855355 caatgccaaaatctgatgaaagtacagggaccaatgacacatttaaacca 9855306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 7050890 - 7050941
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaa 263  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  7050890 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaa 7050941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 10837249 - 10837161
Alignment:
Q  177 cagggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    ||||||||||||||||||       ||| || || |||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  10837249 cagggaccaatgccaaacaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaaaa 10837161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 30794855 - 30794807
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  30794855 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 30794807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 32923772 - 32923724
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  32923772 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 32923724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 34181497 - 34181545
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34181497 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 34181545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 41441462 - 41441414
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  41441462 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 41441414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 2056768 - 2056723
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaa 257  Q
    |||||||||||||||||||||||  |||||||||||||||||||||    
T  2056768 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaa 2056723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 2232780 - 2232727
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||| ||||    
T  2232780 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaaaa 2232727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 2705504 - 2705552
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  2705504 caatgccaaaatctgatgaaagtgcagggatcaatgacacatttaaacc 2705552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 4528981 - 4529029
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  4528981 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 4529029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 17696658 - 17696610
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  17696658 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 17696610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 26695771 - 26695819
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  26695771 caataccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 26695819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 42216621 - 42216669
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  42216621 caatgccaaaatccgatgaaagtgcagggaccaatgacacatttaaacc 42216669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 43857511 - 43857461
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    ||||| |||||| ||||||||||  ||||||||||||||||||||||||||    
T  43857511 caatgtcaaaatttgatgaaagtgcagggaccaatgacacatttaaaccaa 43857461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 17696966 - 17697027
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaataat 273  Q
    |||||||||||||||||||||||  | |||| || |||| |||||||||| |||||||||||    
T  17696966 caatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccataaataaataat 17697027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 7230335 - 7230383
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  | ||| ||||||||||||||||||    
T  7230335 caatgccaaaatctgatgaaagtgcaaggatcaatgacacatttaaacc 7230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 4528699 - 4528636
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| ||||||||||||||    
T  4528699 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaaaaa 4528636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 10496045 - 10496108
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| ||||||||||||||    
T  10496045 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaaaaa 10496108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 42686081 - 42686015
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataa 268  Q
    |||||| || ||||| |||||||||||||||||  || ||| ||||||| |||||| ||||||||||    
T  42686081 gtgtagggaccaatgtcaaaatctgatgaaagtgcagagactaatgacatatttaagccaaaaataa 42686015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 7678606 - 7678663
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaa 269  Q
    |||||||||||| ||||||||||  |  ||||||||||||||||||||| ||| ||||    
T  7678606 caatgccaaaatttgatgaaagtgcatcgaccaatgacacatttaaacctaaattaaa 7678663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 9855662 - 9855723
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaa 263  Q
    |||||| || |||||||||||||||||||||||  |||||| || |||| |||||| |||||    
T  9855662 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaagccaaa 9855723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 10495770 - 10495722
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||||||||||||||  ||||| |||||||| |||||||||    
T  10495770 caatgtcaaaatctgatgaaagtgcagggatcaatgacatatttaaacc 10495722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 37406237 - 37406285
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||| |||||  | |||||||| |||||||||||||    
T  37406237 caatgccaaaatctgatcaaagtgcaaggaccaataacacatttaaacc 37406285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 44638620 - 44638682
Alignment:
Q  203 tgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    ||||| || |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  44638620 tgtagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaa 44638682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 16222842 - 16222894
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaa 264  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  16222842 caatgccaaaatctgatgaaagtgtagggaccaatgacacatttaaaccaaaa 16222894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 23461196 - 23461247
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaa 263  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  23461196 caatgccaaaatctgatgaaagtgtagggaccaatgacacatttaaaccaaa 23461247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 35565090 - 35565042
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35565090 caatgccaaaatctgatgaaagtgtagggaccaatgacacatttaaacc 35565042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 47358198 - 47358150
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  47358198 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 47358150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 51754262 - 51754310
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  51754262 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 51754310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 26050545 - 26050499
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  26050545 caatgccaaaatctgatgaaagtttagggaccaatgacacatttaaa 26050499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 31705464 - 31705514
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  31705464 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaa 31705514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 3017537 - 3017585
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  3017537 caatgccaaaatctgatgaaaatgcagggaccaatgacacatttaaacc 3017585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 21441303 - 21441351
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||    
T  21441303 caatgccaaaatctgatgaaagtgcagggaccagtgacacatttaaacc 21441351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 29352452 - 29352404
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||    
T  29352452 caatgccaaaatctgatgaaagtgcagagaccaatgacacatttaaacc 29352404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 34682327 - 34682279
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  34682327 caataccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 34682279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 44398241 - 44398289
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||    
T  44398241 caatgccaaaatctgatgaaagtgcagggaccaattacacatttaaacc 44398289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 47982445 - 47982356
Alignment:
Q  178 agggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaata 267  Q
    |||||||||||||||||       ||| || || |||| ||||||| ||||||||||  |||||||||||| ||||||||||||||||||    
T  47982445 agggaccaatgccaaacaaaaaaagtgcagggatcaataccaaaatttgatgaaagtgcagggaccaatgatacatttaaaccaaaaata 47982356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 47991732 - 47991643
Alignment:
Q  178 agggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaata 267  Q
    |||||||||||||||||       ||| || || |||| ||||||| ||||||||||  |||||||||||| ||||||||||||||||||    
T  47991732 agggaccaatgccaaacaaaaaaagtgcagggatcaataccaaaatttgatgaaagtgcagggaccaatgatacatttaaaccaaaaata 47991643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 48001019 - 48000930
Alignment:
Q  178 agggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaata 267  Q
    |||||||||||||||||       ||| || || |||| ||||||| ||||||||||  |||||||||||| ||||||||||||||||||    
T  48001019 agggaccaatgccaaacaaaaaaagtgcagggatcaataccaaaatttgatgaaagtgcagggaccaatgatacatttaaaccaaaaata 48000930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 48010306 - 48010217
Alignment:
Q  178 agggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaata 267  Q
    |||||||||||||||||       ||| || || |||| ||||||| ||||||||||  |||||||||||| ||||||||||||||||||    
T  48010306 agggaccaatgccaaacaaaaaaagtgcagggatcaataccaaaatttgatgaaagtgcagggaccaatgatacatttaaaccaaaaata 48010217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 27957508 - 27957458
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    |||||||||||||||||||||||  ||||| |||||||| |||||||||||    
T  27957508 caatgccaaaatctgatgaaagtgcagggatcaatgacaaatttaaaccaa 27957458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 33092349 - 33092395
Alignment:
Q  220 aaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||    
T  33092349 aaatttgatgaaagtgcagggaccaatgacacatttaaaccaaaaat 33092395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 51761134 - 51761180
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaac 259  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||    
T  51761134 aatgccaaaatatgatgaaagtgcagggaccaatgacacatttaaac 51761180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 16732283 - 16732336
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    ||||||||| || ||||||||||  | |||||||||||||||||||||||||||    
T  16732283 caatgccaacatttgatgaaagtgcaaggaccaatgacacatttaaaccaaaaa 16732336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 38443365 - 38443312
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    ||||||||||||||||| |||||  | |||||||||||||||||||||| ||||    
T  38443365 caatgccaaaatctgataaaagtgcaaggaccaatgacacatttaaacctaaaa 38443312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 55328803 - 55328852
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    ||||| |||||||||||||||||  |||||| ||||||||||||||||||    
T  55328803 caatgtcaaaatctgatgaaagtgcagggactaatgacacatttaaacca 55328852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 26920945 - 26920997
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||| |||||  | |||||||||||||||| ||||||||||    
T  26920945 aatgccaaaatctgataaaagtgcatggaccaatgacacattaaaaccaaaaa 26920997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 40037009 - 40037057
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||| |||||||| |  ||||||||||||||||||||||||    
T  40037009 caatgccaaaatttgatgaaaatgcagggaccaatgacacatttaaacc 40037057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Complemental strand, 51760845 - 51760813
Alignment:
Q  237 agggaccaatgacacatttaaaccaaaaataaa 269  Q
    |||||||||||||||||||||||||||||||||    
T  51760845 agggaccaatgacacatttaaaccaaaaataaa 51760813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 54089888 - 54089840
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||| |||||   |||||||||||||||||||||||    
T  54089888 caatgccaaaatctgataaaagtgcggggaccaatgacacatttaaacc 54089840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 54803369 - 54803421
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaa 264  Q
    |||| |||||||||||| |||||  ||||||||||||||||||||||| ||||    
T  54803369 caataccaaaatctgataaaagtgcagggaccaatgacacatttaaactaaaa 54803421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 19988233 - 19988280
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaac 259  Q
    |||||||||||||||| ||||||  ||||||||||||||| |||||||    
T  19988233 caatgccaaaatctgaagaaagtgcagggaccaatgacacgtttaaac 19988280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 51437040 - 51436998
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||| |||||  ||||||||||||||||||||||||    
T  51437040 caaaatctgattaaagtgcagggaccaatgacacatttaaacc 51436998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 52836670 - 52836632
Alignment:
Q  219 aaaatctgatgaaagtagagggaccaatgacacatttaa 257  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  52836670 aaaatctgatgaaagtgcagggaccaatgacacatttaa 52836632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 21560846 - 21560797
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||| |||| ||||| ||||||  ||||||||||||||||||    
T  21560846 caatgccaaaatatgataaaagtggagggaataatgacacatttaaacca 21560797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 265
Target Start/End: Original strand, 40791166 - 40791194
Alignment:
Q  237 agggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||||||||    
T  40791166 agggaccaatgacacatttaaaccaaaaa 40791194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 9566044 - 9565991
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  9566044 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaa 9565991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 16120576 - 16120629
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  16120576 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaa 16120629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 2793082 - 2793027
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaata 267  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  2793082 caatgccaaaatatgatgaaagtgcagggaccaatgacacatttaaaccaaaaata 2793027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 3199365 - 3199307
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  3199365 gtgtagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 3199307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 22695603 - 22695549
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  22695603 caatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaat 22695549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 14631095 - 14631143
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  14631095 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 14631143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 17203913 - 17203861
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaa 264  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  17203913 caataccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaa 17203861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 33360495 - 33360447
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  33360495 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 33360447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 33706167 - 33706214
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  33706167 aatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 33706214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 6535745 - 6535791
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  6535745 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 6535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 10143294 - 10143211
Alignment:
Q  177 cagggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||       ||| || || |||||||||||||||||||||||  |||||||||||| |||||||||||    
T  10143294 cagggaccaatgccaaacaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgagacatttaaacc 10143211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 33243217 - 33243167
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  33243217 caatgccaaaatctgatgaaaatgcagggaccaatgacacatttaaaccaa 33243167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 1827104 - 1827055
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||    
T  1827104 caatgccaaaatctgatgaaagtgcagagaccaatgacacatttaaacca 1827055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 21905424 - 21905473
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  21905424 caatggcaaaatctgatgaaagtgcagggaccaatgacacatttaaacca 21905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 5997241 - 5997193
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  5997241 caatgccaaaatttgatgaaagtgcagggaccaatgacacatttaaacc 5997193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 12395711 - 12395663
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  12395711 caatgccaaaatctgataaaagtgcagggaccaatgacacatttaaacc 12395663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 6389954 - 6389912
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  6389954 caaaatctgatgaaagtgcagggaccaatgacacatttaaacc 6389912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Original strand, 21003143 - 21003185
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  21003143 caaaatctgatgaaagtgcagggaccaatgacacatttaaacc 21003185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 605525 - 605477
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||| ||||  | ||||||||||||||||||||||    
T  605525 caatgccaaaatctgatggaagtgcaaggaccaatgacacatttaaacc 605477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 16120449 - 16120401
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||| || ||||||||||||  ||||||||||||||||||||||||    
T  16120449 caatgccgaagtctgatgaaagtgcagggaccaatgacacatttaaacc 16120401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 32219211 - 32219254
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacattt 255  Q
    |||||||||||||||||||||||  | |||||||||||||||||    
T  32219211 caatgccaaaatctgatgaaagtgcaaggaccaatgacacattt 32219254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 16409106 - 16409156
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    ||||| |||||||||||||||||  ||| | ||||||||||||||||||||    
T  16409106 caatgtcaaaatctgatgaaagtgcaggaatcaatgacacatttaaaccaa 16409156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 21002826 - 21002765
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaa 263  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| ||||||||||||    
T  21002826 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaaa 21002765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 15442984 - 15443037
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  15442984 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaa 15443037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 8343394 - 8343443
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  8343394 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacca 8343443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 25945377 - 25945320
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaa 269  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||    
T  25945377 caatgccaaaatctgatgaaagtgcagggaccaatgtcacatttaaaccataaataaa 25945320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 177 - 270
Target Start/End: Complemental strand, 5907343 - 5907250
Alignment:
Q  177 cagggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaat 270  Q
    ||||||||||||||||||       ||| || || |||||||||||| ||||||||||  ||||||||||||||||||||||||  ||||||||    
T  5907343 cagggaccaatgccaaacaaaaaaagtgcagggaccaatgccaaaatttgatgaaagtgcagggaccaatgacacatttaaaccttaaataaat 5907250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 9177006 - 9176954
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaa 264  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  9177006 caataccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaa 9176954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 20166431 - 20166479
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  20166431 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 20166479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 22619498 - 22619446
Alignment:
Q  209 gaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    ||||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  22619498 gaacaatgccaaaatctgatgaaagtgcagagaccaatgacacatttaaacca 22619446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 26408685 - 26408637
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  26408685 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 26408637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 27858436 - 27858388
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  27858436 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 27858388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 39412484 - 39412532
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  39412484 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 39412532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 23910353 - 23910295
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||| || ||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  23910353 gtgtagggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 23910295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 264
Target Start/End: Original strand, 27858637 - 27858724
Alignment:
Q  177 cagggaccaatgccaaacnnnnnnngtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaa 264  Q
    ||||||||||||||||||       ||| || || |||| |||||||||||||||| |  ||||||||||||||||||||||||||||    
T  27858637 cagggaccaatgccaaacaaaaaaagtgcagggaccaataccaaaatctgatgaaaatgcagggaccaatgacacatttaaaccaaaa 27858724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 16969050 - 16969103
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||| |||||    
T  16969050 caatgccaaaatctgatgaaagtgcagggatcaatgacacatttaaacaaaaaa 16969103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 18036587 - 18036640
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||| |||||| || || ||||||||||||||||||||||||||    
T  18036587 caatgccaaaatcttatgaaattacagagaccaatgacacatttaaaccaaaaa 18036640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 973874 - 973826
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  973874 caatgccaaaatttgatgaaagtgcagggaccaatgacacatttaaacc 973826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 2268275 - 2268227
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||    
T  2268275 caatgccaaaatctgatgaaagtgcagggactaatgacacatttaaacc 2268227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 18705571 - 18705525
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||    
T  18705571 caataccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 18705525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 23592522 - 23592480
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  23592522 caaaatctgatgaaagtgcagggaccaatgacacatttaaacc 23592480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 4716866 - 4716813
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||| ||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  4716866 caataccaaattctgatgaaagtgaagggaccaatgacacatttaaacctaaaa 4716813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 5214602 - 5214651
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    ||||| |||||||||||||||||  | |||||||||||||||||||||||    
T  5214602 caatgtcaaaatctgatgaaagtgcatggaccaatgacacatttaaacca 5214651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 13197957 - 13197912
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaa 257  Q
    |||||||||||||||||||||||  | |||||||||||||||||||    
T  13197957 caatgccaaaatctgatgaaagtgcatggaccaatgacacatttaa 13197912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 13198249 - 13198297
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  | |||||||| |||||||||||||    
T  13198249 caatgccaaaatctgatgaaagtgcaaggaccaataacacatttaaacc 13198297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 23592817 - 23592865
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||||||||||||||  ||||||||||||||| ||||||||    
T  23592817 caatgtcaaaatctgatgaaagtgcagggaccaatgacacgtttaaacc 23592865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 32792411 - 32792363
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||| |||| |||||  ||||||||||||||||||||||||    
T  32792411 caatgccaaaatttgataaaagtgcagggaccaatgacacatttaaacc 32792363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 18673957 - 18673910
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||| |||| |||||  ||||||||||||||||||||||||    
T  18673957 aatgccaaaatatgataaaagtgtagggaccaatgacacatttaaacc 18673910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 11062683 - 11062736
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||| ||||||||||||||||||  ||||||||||||||  ||||||| |||||    
T  11062683 caataccaaaatctgatgaaagtgcagggaccaatgacatgtttaaacaaaaaa 11062736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 30492194 - 30492255
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaa 263  Q
    |||||| || ||||||||||||||||| |||||  | ||  |||||||||||||||||||||    
T  30492194 gtgtagggaccaatgccaaaatctgataaaagtgtatggctcaatgacacatttaaaccaaa 30492255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 17964697 - 17964649
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||| ||||||||||||||||  ||| |||||| |||||||||||||    
T  17964697 caatgcaaaaatctgatgaaagtgcaggaaccaataacacatttaaacc 17964649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 42496294 - 42496347
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  42496294 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaaaa 42496347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 32328109 - 32328055
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaat 266  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  32328109 caatgccaaaatctgatgaaagtgcagggaccagtgacacatttaaaccaaaaat 32328055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 49263922 - 49263864
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaat 270  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||||| |||||||||    
T  49263922 caatgccaaaatctaatgaaagtgcagggaccaatgacacatttaaacctaaaataaat 49263864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 13199021 - 13198968
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  13199021 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaaaa 13198968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 23205747 - 23205698
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  23205747 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacca 23205698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 46008987 - 46009036
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  46008987 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacca 46009036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 53940709 - 53940762
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  53940709 caatgccaaaatctgataaaagtgcagggaccaatgacacatttaaaccaaaaa 53940762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 322011 - 322059
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  322011 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 322059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Original strand, 13086619 - 13086678
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaataa 272  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||| |||||    
T  13086619 caatgccaaaatctgat-aaagtacagggaccaatgatacatttaaaccaaaaattaataa 13086678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 15168961 - 15168913
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15168961 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 15168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 40147399 - 40147351
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  40147399 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 40147351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 43980130 - 43980186
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||| || |||||||||||||||||||||||  ||||||||||||||||||||||    
T  43980130 gtgtagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 43980186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 45311244 - 45311196
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  45311244 caatgccaaaatatgatgaaagtacagggaccaatgacacatttaaacc 45311196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 51892711 - 51892663
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  51892711 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 51892663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 43561855 - 43561800
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataa 268  Q
    |||| |||||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  43561855 aatgtcaaaatctgatgaaagtacagggaccaatgacacatttaacctaaaaataa 43561800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 52096907 - 52096958
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaa 263  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  52096907 caataccaaaatctgatgaaagtgcagggaccaatgacacatttaaaccaaa 52096958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 270
Target Start/End: Complemental strand, 919226 - 919168
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaat 270  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||  ||||||||    
T  919226 caatgccaaaatctgatgaaagtgcagggactaatgacacatttaaaccttaaataaat 919168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 10616510 - 10616464
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  10616510 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 10616464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 41965504 - 41965554
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaa 262  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||    
T  41965504 caatgccaaaatctgatgaaagtgcagagaccaatgacacatttaaaccaa 41965554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 5813820 - 5813771
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  5813820 caatgccaaaatctgaagaaagtgaagggaccaatgacacatttaaacca 5813771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 39210621 - 39210674
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||||| ||||    
T  39210621 caatgccaaaatttgatgaaagtgcagggaccaatgacacatttaaacctaaaa 39210674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 45848637 - 45848686
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||    
T  45848637 caatgccaaaatctgatgaaagtgctgggaccaatgacacatttaaacca 45848686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 888115 - 888067
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  888115 caatgccaaaatctgataaaagtgcagggaccaatgacacatttaaacc 888067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 8445022 - 8445070
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  8445022 caatgccaaaatctgataaaagtgcagggaccaatgacacatttaaacc 8445070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 16335104 - 16335056
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||    
T  16335104 caatgccaaaatctgatgaaagtgcagggaccaatgacagatttaaacc 16335056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 31317592 - 31317640
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||    
T  31317592 caatgccaaaatctgatgaaagtgcagagaccaatgacacatttaaacc 31317640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 32384143 - 32384095
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||    
T  32384143 caatgccaaaatctgatgaaagtgcagggaccaatgacatatttaaacc 32384095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 35378024 - 35378072
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  35378024 caatgccaaaatctgatgaaattgcagggaccaatgacacatttaaacc 35378072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 51716479 - 51716537
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||| || |||||||||||||| ||||||||  |||||||||| |||||||||||||    
T  51716479 gtgtagggaccaatgccaaaatctaatgaaagtgcagggaccaataacacatttaaacc 51716537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 29526297 - 29526244
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||||||||||||||||||||  | ||||||| |||||||||||||| ||||    
T  29526297 caatgccaaaatctgatgaaagtgcaaggaccaaagacacatttaaacctaaaa 29526244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 44589077 - 44589028
Alignment:
Q  209 gaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaa 258  Q
    |||||||| |||||||||||||||||  ||| ||||||||||||||||||    
T  44589077 gaacaatgtcaaaatctgatgaaagtgcaggaaccaatgacacatttaaa 44589028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 47690340 - 47690292
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||| ||||| ||||||||  ||||||||||||||||||||||||    
T  47690340 caatgccataatctaatgaaagtgcagggaccaatgacacatttaaacc 47690292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 269
Target Start/End: Complemental strand, 8444715 - 8444648
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaa 269  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| |||||||||| |||||||    
T  8444715 gtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaaccataaataaa 8444648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 31317316 - 31317253
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| ||||||||||||||    
T  31317316 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaaaaa 31317253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 42207913 - 42207867
Alignment:
Q  213 aatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  42207913 aatgccaaaatctgatgaaagtgcagg-accaatgacacatttaaacc 42207867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 47690646 - 47690704
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||| || |||||||||||||||||||||||  |||||| || |||| |||||||||    
T  47690646 gtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaaacc 47690704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 51892987 - 51893049
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaa 264  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| |||||||||||||    
T  51892987 gtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaaaa 51893049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 1614274 - 1614322
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||| | ||||||||  ||||||||||||||||||||||||    
T  1614274 caatgtcaaaatttaatgaaagtgcagggaccaatgacacatttaaacc 1614322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 1922827 - 1922875
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||| |||||||| |  | ||||||||||||||||||||||    
T  1922827 caatgccaaaatatgatgaaaatgcaaggaccaatgacacatttaaacc 1922875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 51716169 - 51716109
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaataaataa 272  Q
    |||||||||||| ||||||||||  | |||| || |||| |||||||||||||| ||||||    
T  51716169 caatgccaaaatttgatgaaagtgcaaggactaaagacatatttaaaccaaaaaaaaataa 51716109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 14173 - 14124
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacca 261  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  14173 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacca 14124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 5820 - 5868
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  5820 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 35704 - 35752
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35704 caatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 35752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 6088 - 6030
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||| || |||||||||||||||||||||||  || |||||||||||||||||||||    
T  6088 gtgtagggaccaatgccaaaatctgatgaaagtgcagagaccaatgacacatttaaacc 6030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 6382 - 6445
Alignment:
Q  202 gtgtagcgaacaatgccaaaatctgatgaaagtagagggaccaatgacacatttaaaccaaaaa 265  Q
    |||||| || |||||||||||||||||||||||  | |||| || |||| ||||||||||||||    
T  6382 gtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaaccaaaaa 6445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 57756 - 57804
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||    
T  57756 caatgccaaaatctgatgaaagtgcagggaccaatgacagatttaaacc 57804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 9634 - 9590
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacattta 256  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  9634 caatgccaaaatctgatgaaagtgcagggaccaatgacacattta 9590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 49765 - 49717
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  49765 caataccaaaatctgatgaaagtgcagggaccaatgacacatttaaacc 49717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 58784 - 58832
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||    
T  58784 caatgccaaaatctgatgaaagtgcatggaccaatgacacatttaaacc 58832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 1572 - 1620
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||||||||||||  | |||||||| |||||||||||||    
T  1572 caatgccaaaatctgatgaaagtgcaaggaccaattacacatttaaacc 1620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 17201 - 17249
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    |||||||||||||| ||||||||  |||||||||| |||||||||||||    
T  17201 caatgccaaaatctaatgaaagtgcagggaccaataacacatttaaacc 17249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 2992 - 2951
Alignment:
Q  218 caaaatctgatgaaagtagagggaccaatgacacatttaaac 259  Q
    |||||||||||||||||  ||| |||||||||||||||||||    
T  2992 caaaatctgatgaaagtgcaggaaccaatgacacatttaaac 2951  T

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Target: scaffold0185 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 8111 - 8063
Alignment:
Q  212 caatgccaaaatctgatgaaagtagagggaccaatgacacatttaaacc 260  Q
    ||||| |||||||||||||||||  |||||||| ||||| |||||||||    
T  8111 caatgtcaaaatctgatgaaagtgcagggaccagtgacatatttaaacc 8063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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