View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11899_low_6 (Length: 204)

Name: NF11899_low_6
Description: NF11899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11899_low_6
NF11899_low_6
[»] chr6 (57 HSPs)
chr6 (1-204)||(14978533-14978736)
chr6 (1-204)||(25618890-25619092)
chr6 (10-204)||(20556033-20556227)
chr6 (90-204)||(611657-611771)
chr6 (10-111)||(18697380-18697483)
chr6 (10-111)||(18707131-18707234)
chr6 (11-109)||(20137527-20137626)
chr6 (11-109)||(22195243-22195342)
chr6 (133-204)||(13765204-13765275)
chr6 (133-204)||(23225981-23226052)
chr6 (133-204)||(23956720-23956791)
chr6 (11-92)||(17229064-17229145)
chr6 (11-88)||(18454102-18454179)
chr6 (133-204)||(31021845-31021916)
chr6 (10-204)||(23415762-23415954)
chr6 (11-100)||(22792430-22792520)
chr6 (10-92)||(23527299-23527381)
chr6 (10-204)||(27557520-27557715)
chr6 (10-109)||(19363318-19363416)
chr6 (11-78)||(8226740-8226806)
chr6 (133-204)||(12942987-12943058)
chr6 (11-78)||(23531896-23531962)
chr6 (133-204)||(28288630-28288701)
chr6 (10-92)||(17027863-17027945)
chr6 (10-92)||(25535976-25536058)
chr6 (10-92)||(25689394-25689476)
chr6 (10-92)||(25721066-25721148)
chr6 (10-92)||(25753409-25753491)
chr6 (10-92)||(25755579-25755661)
chr6 (10-92)||(34963941-34964023)
chr6 (11-60)||(17201080-17201129)
chr6 (9-109)||(18895484-18895583)
chr6 (9-78)||(33443947-33444016)
chr6 (11-87)||(12743192-12743268)
chr6 (11-87)||(18333806-18333882)
chr6 (11-87)||(18343063-18343139)
chr6 (11-87)||(24423419-24423495)
chr6 (11-87)||(33862669-33862745)
chr6 (11-87)||(33865150-33865226)
chr6 (11-109)||(8055877-8055978)
chr6 (10-92)||(13612350-13612432)
chr6 (11-109)||(17882710-17882811)
chr6 (10-92)||(18914886-18914967)
chr6 (10-92)||(23992990-23993072)
chr6 (11-92)||(16198366-16198447)
chr6 (11-92)||(31629861-31629942)
chr6 (12-92)||(1599002-1599082)
chr6 (11-75)||(16447754-16447818)
chr6 (11-87)||(19858136-19858212)
chr6 (11-87)||(22783100-22783176)
chr6 (11-87)||(26923659-26923735)
chr6 (166-198)||(29045126-29045158)
chr6 (12-75)||(21119807-21119870)
chr6 (10-92)||(30676038-30676120)
chr6 (11-75)||(3850996-3851060)
chr6 (162-190)||(18585549-18585577)
chr6 (11-75)||(19102462-19102526)
[»] chr1 (43 HSPs)
chr1 (1-204)||(13880528-13880731)
chr1 (9-111)||(48521361-48521465)
chr1 (9-204)||(22130024-22130220)
chr1 (11-204)||(45574020-45574214)
chr1 (11-151)||(14801299-14801442)
chr1 (11-151)||(14810173-14810316)
chr1 (11-92)||(20959000-20959081)
chr1 (11-92)||(21042505-21042586)
chr1 (11-109)||(22125150-22125250)
chr1 (133-204)||(297213-297284)
chr1 (95-162)||(20058382-20058449)
chr1 (133-204)||(28313206-28313277)
chr1 (10-92)||(47191472-47191554)
chr1 (10-86)||(20453635-20453711)
chr1 (10-92)||(52940026-52940108)
chr1 (11-109)||(22777315-22777414)
chr1 (164-204)||(23194667-23194707)
chr1 (9-92)||(46560049-46560132)
chr1 (9-87)||(14237653-14237731)
chr1 (9-87)||(51083150-51083228)
chr1 (11-87)||(13989738-13989814)
chr1 (11-87)||(16362792-16362868)
chr1 (11-87)||(21922503-21922579)
chr1 (11-87)||(41373346-41373422)
chr1 (11-87)||(48444367-48444443)
chr1 (166-204)||(24723618-24723656)
chr1 (11-92)||(22050350-22050431)
chr1 (11-87)||(21474298-21474374)
chr1 (10-111)||(21683846-21683949)
chr1 (11-87)||(21841643-21841719)
chr1 (12-92)||(22122168-22122248)
chr1 (11-87)||(23592944-23593020)
chr1 (12-92)||(31613309-31613389)
chr1 (12-92)||(41230941-41231021)
chr1 (10-92)||(43543461-43543546)
chr1 (166-204)||(7052171-7052209)
chr1 (10-92)||(16274572-16274654)
chr1 (8-66)||(43629294-43629352)
chr1 (11-92)||(9044518-9044599)
chr1 (160-197)||(21243889-21243926)
chr1 (11-92)||(29299002-29299083)
chr1 (166-198)||(6834028-6834060)
chr1 (166-198)||(17901960-17901992)
[»] scaffold0394 (1 HSPs)
scaffold0394 (10-204)||(12907-13101)
[»] chr4 (51 HSPs)
chr4 (11-204)||(23802406-23802599)
chr4 (10-204)||(12611768-12611962)
chr4 (12-204)||(51463031-51463223)
chr4 (90-204)||(15344792-15344906)
chr4 (90-204)||(15447458-15447572)
chr4 (90-190)||(13043850-13043950)
chr4 (10-111)||(12841514-12841617)
chr4 (133-204)||(16277411-16277482)
chr4 (133-204)||(28386101-28386172)
chr4 (133-204)||(53387021-53387092)
chr4 (10-109)||(15792646-15792747)
chr4 (10-109)||(32306151-32306252)
chr4 (11-109)||(26049620-26049720)
chr4 (133-204)||(18230598-18230669)
chr4 (133-204)||(49547067-49547138)
chr4 (133-204)||(33849600-33849671)
chr4 (133-204)||(36038668-36038739)
chr4 (10-92)||(14852023-14852105)
chr4 (11-78)||(22354654-22354720)
chr4 (133-204)||(15534979-15535050)
chr4 (11-111)||(26790206-26790307)
chr4 (10-92)||(19617394-19617476)
chr4 (133-179)||(45005827-45005873)
chr4 (11-92)||(363134-363215)
chr4 (11-87)||(12032985-12033061)
chr4 (11-87)||(14717934-14718010)
chr4 (11-87)||(15117566-15117642)
chr4 (11-87)||(19243575-19243651)
chr4 (11-87)||(29268228-29268304)
chr4 (12-92)||(52313515-52313595)
chr4 (9-87)||(3485841-3485919)
chr4 (10-92)||(14970026-14970108)
chr4 (11-92)||(15354846-15354928)
chr4 (166-204)||(19434817-19434855)
chr4 (10-92)||(52872401-52872483)
chr4 (11-92)||(3515768-3515849)
chr4 (9-78)||(17334182-17334251)
chr4 (11-87)||(44772297-44772373)
chr4 (11-87)||(50221552-50221628)
chr4 (11-75)||(54797886-54797950)
chr4 (166-204)||(14549506-14549544)
chr4 (10-92)||(15489468-15489550)
chr4 (166-204)||(16296727-16296765)
chr4 (166-204)||(35660744-35660782)
chr4 (14-75)||(14281256-14281317)
chr4 (11-92)||(18214524-18214605)
chr4 (16-92)||(11773-11849)
chr4 (11-87)||(7640400-7640476)
chr4 (11-87)||(14873299-14873375)
chr4 (11-87)||(18238826-18238902)
chr4 (11-75)||(53081303-53081367)
[»] scaffold0083 (1 HSPs)
scaffold0083 (10-204)||(42154-42348)
[»] chr3 (68 HSPs)
chr3 (10-204)||(50243670-50243864)
chr3 (10-204)||(24152385-24152579)
chr3 (64-202)||(16643942-16644080)
chr3 (98-204)||(6820027-6820133)
chr3 (90-204)||(43929248-43929361)
chr3 (10-111)||(325028-325131)
chr3 (133-204)||(55291725-55291796)
chr3 (133-204)||(42385-42456)
chr3 (9-204)||(5224180-5224376)
chr3 (133-204)||(10555164-10555235)
chr3 (133-204)||(43549779-43549850)
chr3 (11-111)||(44495486-44495588)
chr3 (133-204)||(46722710-46722781)
chr3 (10-92)||(9578516-9578598)
chr3 (3-72)||(16644951-16645020)
chr3 (135-204)||(16324666-16324735)
chr3 (11-92)||(32402182-32402263)
chr3 (133-204)||(10833429-10833500)
chr3 (10-92)||(11202192-11202274)
chr3 (26-204)||(15465952-15466131)
chr3 (133-204)||(3803671-3803742)
chr3 (133-204)||(12305920-12305991)
chr3 (133-204)||(13437096-13437167)
chr3 (10-100)||(15207797-15207888)
chr3 (133-204)||(18893540-18893610)
chr3 (133-204)||(29544157-29544228)
chr3 (133-204)||(54521620-54521691)
chr3 (154-204)||(18890281-18890331)
chr3 (10-204)||(26054434-26054629)
chr3 (11-78)||(22146768-22146834)
chr3 (11-78)||(37641504-37641570)
chr3 (10-92)||(24514244-24514326)
chr3 (10-87)||(6468347-6468424)
chr3 (11-92)||(12119185-12119266)
chr3 (32-100)||(15266042-15266111)
chr3 (11-87)||(7780559-7780635)
chr3 (11-87)||(10246936-10247012)
chr3 (10-78)||(13919753-13919821)
chr3 (12-92)||(13937295-13937375)
chr3 (11-87)||(15978407-15978483)
chr3 (11-87)||(17464050-17464126)
chr3 (11-87)||(34160198-34160274)
chr3 (12-92)||(41124700-41124780)
chr3 (11-77)||(13522202-13522267)
chr3 (10-92)||(20629511-20629593)
chr3 (10-92)||(46823022-46823104)
chr3 (10-92)||(55318623-55318705)
chr3 (11-87)||(13151002-13151078)
chr3 (11-87)||(13153470-13153546)
chr3 (12-92)||(13938301-13938381)
chr3 (11-87)||(16453489-16453565)
chr3 (12-92)||(17444084-17444164)
chr3 (11-75)||(21619388-21619452)
chr3 (12-92)||(38961158-38961238)
chr3 (11-87)||(45577655-45577731)
chr3 (11-87)||(55477364-55477440)
chr3 (11-109)||(14604815-14604914)
chr3 (11-58)||(52465371-52465418)
chr3 (166-204)||(6805085-6805123)
chr3 (10-92)||(10379900-10379982)
chr3 (162-204)||(45803491-45803533)
chr3 (10-75)||(36167537-36167602)
chr3 (11-48)||(43549659-43549696)
chr3 (11-87)||(1864367-1864443)
chr3 (162-190)||(13522502-13522530)
chr3 (12-92)||(16282079-16282159)
chr3 (11-87)||(28847833-28847909)
chr3 (162-190)||(48631202-48631230)
[»] chr7 (79 HSPs)
chr7 (10-204)||(18455589-18455783)
chr7 (90-204)||(16462926-16463040)
chr7 (90-200)||(39431268-39431378)
chr7 (90-204)||(44190297-44190411)
chr7 (99-204)||(13864452-13864557)
chr7 (90-190)||(23557404-23557504)
chr7 (90-204)||(4325953-4326067)
chr7 (90-190)||(23556215-23556315)
chr7 (133-204)||(14105551-14105622)
chr7 (133-204)||(14415568-14415639)
chr7 (133-204)||(17505088-17505159)
chr7 (133-204)||(17548055-17548126)
chr7 (11-201)||(13648142-13648333)
chr7 (11-204)||(1856401-1856595)
chr7 (11-204)||(13917573-13917767)
chr7 (12-204)||(25926301-25926494)
chr7 (10-92)||(16997063-16997145)
chr7 (14-92)||(38519654-38519732)
chr7 (10-111)||(37793391-37793492)
chr7 (11-92)||(42462842-42462923)
chr7 (133-204)||(14188417-14188488)
chr7 (11-109)||(129943-130042)
chr7 (133-204)||(11304045-11304116)
chr7 (133-204)||(11661963-11662034)
chr7 (10-92)||(11768089-11768170)
chr7 (133-204)||(13256550-13256621)
chr7 (133-204)||(16107982-16108053)
chr7 (133-204)||(23664246-23664317)
chr7 (11-173)||(42374305-42374468)
chr7 (10-109)||(11524798-11524898)
chr7 (11-78)||(19485973-19486039)
chr7 (11-109)||(27217708-27217809)
chr7 (9-78)||(17052760-17052829)
chr7 (165-204)||(14274079-14274118)
chr7 (10-92)||(8941235-8941317)
chr7 (11-92)||(5294432-5294513)
chr7 (11-87)||(457195-457271)
chr7 (26-78)||(9032531-9032583)
chr7 (12-92)||(11973116-11973196)
chr7 (11-87)||(15375927-15376003)
chr7 (11-87)||(16410932-16411008)
chr7 (11-87)||(20384337-20384413)
chr7 (8-92)||(23461630-23461714)
chr7 (11-87)||(24703096-24703172)
chr7 (11-87)||(24705543-24705619)
chr7 (133-204)||(29797408-29797479)
chr7 (133-204)||(29801227-29801298)
chr7 (10-92)||(8469303-8469385)
chr7 (166-204)||(12754823-12754861)
chr7 (10-92)||(14269083-14269165)
chr7 (166-204)||(25942328-25942366)
chr7 (11-109)||(26355194-26355295)
chr7 (11-109)||(26357646-26357747)
chr7 (10-92)||(45846764-45846846)
chr7 (11-92)||(5295605-5295686)
chr7 (11-92)||(5296778-5296859)
chr7 (11-92)||(9945010-9945091)
chr7 (11-75)||(10062883-10062947)
chr7 (11-87)||(13870218-13870294)
chr7 (10-78)||(17016596-17016664)
chr7 (11-87)||(18431585-18431661)
chr7 (11-87)||(18628438-18628514)
chr7 (12-92)||(21188926-21189006)
chr7 (11-87)||(41523792-41523868)
chr7 (12-87)||(16580593-16580668)
chr7 (166-204)||(708679-708717)
chr7 (11-109)||(14156392-14156493)
chr7 (166-204)||(47975049-47975087)
chr7 (10-75)||(9176834-9176899)
chr7 (11-88)||(14317516-14317593)
chr7 (11-80)||(14948333-14948402)
chr7 (11-87)||(16233394-16233471)
chr7 (14-87)||(41526254-41526327)
chr7 (11-75)||(3387454-3387518)
chr7 (166-198)||(13315239-13315271)
chr7 (11-87)||(18641144-18641220)
chr7 (164-204)||(19195048-19195088)
chr7 (11-87)||(32126363-32126439)
chr7 (11-75)||(48274489-48274553)
[»] chr5 (49 HSPs)
chr5 (10-204)||(22412944-22413138)
chr5 (11-204)||(18419309-18419503)
chr5 (133-204)||(27868698-27868769)
chr5 (133-204)||(33472687-33472758)
chr5 (11-109)||(23470643-23470744)
chr5 (11-100)||(31062205-31062293)
chr5 (133-204)||(41875716-41875787)
chr5 (11-92)||(23476375-23476456)
chr5 (15-109)||(25573581-25573677)
chr5 (16-109)||(25576010-25576105)
chr5 (9-80)||(40723458-40723529)
chr5 (16-108)||(25574817-25574911)
chr5 (11-86)||(41860581-41860655)
chr5 (11-111)||(41094818-41094921)
chr5 (133-204)||(9776963-9777034)
chr5 (11-78)||(40726666-40726732)
chr5 (11-92)||(14048959-14049040)
chr5 (10-101)||(26739796-26739888)
chr5 (133-204)||(37804196-37804267)
chr5 (10-92)||(2153951-2154033)
chr5 (10-92)||(20572732-20572813)
chr5 (10-92)||(29330734-29330816)
chr5 (11-87)||(20909887-20909963)
chr5 (11-87)||(23065388-23065464)
chr5 (164-204)||(24594218-24594258)
chr5 (164-204)||(24668312-24668352)
chr5 (164-204)||(24738081-24738121)
chr5 (164-204)||(24750850-24750890)
chr5 (11-87)||(29346853-29346929)
chr5 (11-87)||(29349326-29349402)
chr5 (11-87)||(29351799-29351875)
chr5 (11-87)||(39246008-39246084)
chr5 (169-204)||(30138244-30138279)
chr5 (10-88)||(17516289-17516367)
chr5 (162-204)||(21503995-21504037)
chr5 (10-92)||(24473835-24473917)
chr5 (16-101)||(26731989-26732075)
chr5 (11-87)||(263982-264058)
chr5 (11-75)||(18318184-18318248)
chr5 (12-92)||(20917168-20917248)
chr5 (11-87)||(38620308-38620384)
chr5 (11-87)||(39364256-39364332)
chr5 (11-87)||(42244576-42244652)
chr5 (10-80)||(15797324-15797394)
chr5 (166-204)||(36508901-36508939)
chr5 (10-75)||(22177346-22177411)
chr5 (11-87)||(10732151-10732227)
chr5 (11-75)||(20765230-20765294)
chr5 (12-92)||(32028786-32028866)
[»] chr2 (56 HSPs)
chr2 (10-200)||(22172978-22173168)
chr2 (9-204)||(7187283-7187478)
chr2 (98-204)||(43707136-43707242)
chr2 (133-204)||(20590406-20590477)
chr2 (133-204)||(41301053-41301124)
chr2 (12-109)||(34137816-34137915)
chr2 (10-109)||(39827194-39827295)
chr2 (133-204)||(13100858-13100929)
chr2 (133-204)||(21072812-21072883)
chr2 (133-204)||(23338523-23338594)
chr2 (10-204)||(31345977-31346172)
chr2 (90-151)||(31521078-31521139)
chr2 (11-109)||(43946518-43946618)
chr2 (10-92)||(24682197-24682279)
chr2 (10-109)||(27845509-27845610)
chr2 (10-101)||(26393283-26393375)
chr2 (133-204)||(10684056-10684127)
chr2 (133-204)||(20262017-20262088)
chr2 (10-92)||(23932221-23932303)
chr2 (10-92)||(32214249-32214331)
chr2 (11-92)||(22106226-22106307)
chr2 (12-92)||(6726808-6726888)
chr2 (11-87)||(18809815-18809891)
chr2 (11-87)||(22695207-22695283)
chr2 (11-87)||(23131734-23131810)
chr2 (11-87)||(23134201-23134277)
chr2 (11-87)||(23711227-23711303)
chr2 (11-87)||(32038711-32038787)
chr2 (11-87)||(34401736-34401812)
chr2 (10-92)||(23706345-23706427)
chr2 (10-67)||(23079873-23079930)
chr2 (11-92)||(24918901-24918982)
chr2 (11-92)||(45027220-45027301)
chr2 (12-92)||(24368588-24368668)
chr2 (11-87)||(28577977-28578053)
chr2 (10-78)||(38968358-38968426)
chr2 (11-87)||(39683188-39683264)
chr2 (120-163)||(22790369-22790412)
chr2 (174-204)||(1383818-1383848)
chr2 (10-92)||(18546142-18546224)
chr2 (13-87)||(24897411-24897485)
chr2 (13-87)||(24899894-24899968)
chr2 (13-87)||(24902371-24902445)
chr2 (13-87)||(24904848-24904922)
chr2 (13-87)||(24907323-24907397)
chr2 (166-204)||(36734610-36734648)
chr2 (163-204)||(12626587-12626628)
chr2 (175-204)||(31521034-31521063)
chr2 (12-80)||(9785521-9785589)
chr2 (162-190)||(19647104-19647132)
chr2 (12-92)||(21154136-21154216)
chr2 (11-87)||(23136440-23136516)
chr2 (12-92)||(24671786-24671866)
chr2 (11-75)||(24941588-24941652)
chr2 (11-87)||(26508729-26508805)
chr2 (11-75)||(43138264-43138328)
[»] chr8 (61 HSPs)
chr8 (11-204)||(23661154-23661347)
chr8 (10-204)||(17460207-17460402)
chr8 (90-204)||(20463052-20463166)
chr8 (115-204)||(20455844-20455933)
chr8 (138-204)||(20460822-20460888)
chr8 (138-203)||(20455109-20455174)
chr8 (11-92)||(22245237-22245318)
chr8 (11-92)||(22252315-22252396)
chr8 (133-204)||(8413872-8413943)
chr8 (11-109)||(22385077-22385176)
chr8 (10-204)||(25483441-25483636)
chr8 (133-204)||(19882805-19882876)
chr8 (10-204)||(14396910-14397105)
chr8 (10-79)||(20501229-20501298)
chr8 (11-111)||(22526359-22526461)
chr8 (13-92)||(22984534-22984612)
chr8 (10-96)||(22184007-22184093)
chr8 (11-92)||(28398459-28398540)
chr8 (10-78)||(22996696-22996764)
chr8 (11-92)||(24049371-24049452)
chr8 (12-92)||(20404040-20404120)
chr8 (10-92)||(1326444-1326526)
chr8 (10-92)||(16412634-16412716)
chr8 (11-111)||(16800309-16800411)
chr8 (18-92)||(17085077-17085151)
chr8 (18-92)||(17085311-17085385)
chr8 (11-92)||(19897275-19897356)
chr8 (11-92)||(32122489-32122570)
chr8 (11-92)||(32810455-32810536)
chr8 (11-87)||(1485274-1485350)
chr8 (11-87)||(4484152-4484228)
chr8 (133-177)||(11775598-11775642)
chr8 (11-87)||(14408658-14408734)
chr8 (11-87)||(14824648-14824724)
chr8 (11-87)||(18677276-18677352)
chr8 (11-87)||(20045409-20045485)
chr8 (10-109)||(45289760-45289863)
chr8 (90-159)||(22920053-22920124)
chr8 (11-109)||(5852507-5852608)
chr8 (10-92)||(11361278-11361360)
chr8 (12-78)||(22418588-22418654)
chr8 (162-204)||(22483636-22483678)
chr8 (11-92)||(19928758-19928839)
chr8 (11-92)||(20457439-20457520)
chr8 (9-78)||(20532534-20532603)
chr8 (11-92)||(27471737-27471818)
chr8 (11-87)||(4541584-4541660)
chr8 (11-87)||(22002627-22002703)
chr8 (11-75)||(26220558-26220622)
chr8 (11-75)||(26222331-26222395)
chr8 (162-204)||(25657668-25657710)
chr8 (10-92)||(38549132-38549214)
chr8 (11-92)||(15202306-15202387)
chr8 (11-92)||(37609722-37609803)
chr8 (11-75)||(13507232-13507296)
chr8 (11-75)||(13596764-13596828)
chr8 (9-92)||(19936238-19936319)
chr8 (162-190)||(20879343-20879371)
chr8 (11-75)||(22365542-22365606)
chr8 (11-75)||(24353952-24354016)
chr8 (11-87)||(24485254-24485330)
[»] scaffold0877 (1 HSPs)
scaffold0877 (9-204)||(2026-2222)
[»] scaffold0290 (1 HSPs)
scaffold0290 (10-204)||(930-1125)
[»] scaffold1439 (1 HSPs)
scaffold1439 (11-204)||(933-1126)
[»] scaffold0125 (1 HSPs)
scaffold0125 (10-204)||(1050-1245)
[»] scaffold0112 (1 HSPs)
scaffold0112 (10-204)||(23123-23318)
[»] scaffold0057 (1 HSPs)
scaffold0057 (10-204)||(72294-72482)
[»] scaffold0037 (1 HSPs)
scaffold0037 (11-204)||(82855-83048)
[»] scaffold0023 (2 HSPs)
scaffold0023 (90-190)||(163205-163305)
scaffold0023 (11-87)||(95283-95359)
[»] scaffold0956 (1 HSPs)
scaffold0956 (90-204)||(2176-2290)
[»] scaffold0364 (1 HSPs)
scaffold0364 (90-204)||(8021-8135)
[»] scaffold0106 (2 HSPs)
scaffold0106 (90-202)||(21843-21955)
scaffold0106 (15-109)||(18857-18953)
[»] scaffold0016 (3 HSPs)
scaffold0016 (90-204)||(174189-174303)
scaffold0016 (10-101)||(118754-118845)
scaffold0016 (12-92)||(185030-185110)
[»] scaffold0070 (1 HSPs)
scaffold0070 (125-204)||(8948-9027)
[»] scaffold0054 (1 HSPs)
scaffold0054 (9-109)||(75023-75124)
[»] scaffold0009 (1 HSPs)
scaffold0009 (11-92)||(191798-191879)
[»] scaffold0151 (2 HSPs)
scaffold0151 (133-204)||(9952-10023)
scaffold0151 (10-92)||(36598-36680)
[»] scaffold0058 (1 HSPs)
scaffold0058 (133-204)||(39936-40007)
[»] scaffold0200 (1 HSPs)
scaffold0200 (9-204)||(18451-18647)
[»] scaffold0001 (5 HSPs)
scaffold0001 (10-109)||(447365-447466)
scaffold0001 (133-204)||(169297-169368)
scaffold0001 (133-204)||(176650-176721)
scaffold0001 (11-109)||(498275-498375)
scaffold0001 (11-92)||(501825-501906)
[»] scaffold0169 (1 HSPs)
scaffold0169 (10-109)||(28695-28795)
[»] scaffold0010 (2 HSPs)
scaffold0010 (12-93)||(7179-7260)
scaffold0010 (11-92)||(1528-1609)
[»] scaffold1276 (1 HSPs)
scaffold1276 (133-204)||(997-1068)
[»] scaffold0334 (1 HSPs)
scaffold0334 (133-204)||(1982-2053)
[»] scaffold1835 (1 HSPs)
scaffold1835 (10-109)||(159-260)
[»] scaffold0007 (2 HSPs)
scaffold0007 (11-100)||(160278-160368)
scaffold0007 (11-100)||(163557-163646)
[»] scaffold0282 (1 HSPs)
scaffold0282 (11-92)||(17335-17416)
[»] scaffold0117 (2 HSPs)
scaffold0117 (10-204)||(42529-42724)
scaffold0117 (8-78)||(40216-40285)
[»] scaffold0107 (1 HSPs)
scaffold0107 (10-111)||(13551-13652)
[»] scaffold0040 (4 HSPs)
scaffold0040 (11-109)||(23070-23168)
scaffold0040 (16-108)||(14214-14307)
scaffold0040 (10-92)||(20605-20687)
scaffold0040 (11-87)||(13033-13109)
[»] scaffold0480 (1 HSPs)
scaffold0480 (11-109)||(10287-10387)
[»] scaffold0091 (1 HSPs)
scaffold0091 (26-109)||(31651-31735)
[»] scaffold0012 (1 HSPs)
scaffold0012 (10-77)||(220333-220400)
[»] scaffold0011 (1 HSPs)
scaffold0011 (9-92)||(37281-37363)
[»] scaffold0347 (1 HSPs)
scaffold0347 (10-92)||(9773-9854)
[»] scaffold0750 (1 HSPs)
scaffold0750 (9-108)||(4491-4591)
[»] scaffold0453 (1 HSPs)
scaffold0453 (133-204)||(7134-7205)
[»] scaffold0422 (1 HSPs)
scaffold0422 (133-204)||(3821-3892)
[»] scaffold0293 (1 HSPs)
scaffold0293 (12-204)||(19301-19494)
[»] scaffold0074 (1 HSPs)
scaffold0074 (11-109)||(9058-9159)
[»] scaffold0417 (1 HSPs)
scaffold0417 (11-109)||(481-581)
[»] scaffold0234 (1 HSPs)
scaffold0234 (90-163)||(26064-26136)
[»] scaffold0108 (1 HSPs)
scaffold0108 (11-80)||(4013-4082)
[»] scaffold0014 (1 HSPs)
scaffold0014 (11-101)||(203540-203632)
[»] scaffold0494 (1 HSPs)
scaffold0494 (10-92)||(35-117)
[»] scaffold0051 (1 HSPs)
scaffold0051 (10-204)||(32001-32195)
[»] scaffold0254 (2 HSPs)
scaffold0254 (11-87)||(19145-19221)
scaffold0254 (11-87)||(21623-21699)
[»] scaffold0914 (1 HSPs)
scaffold0914 (10-100)||(2606-2697)
[»] scaffold0004 (2 HSPs)
scaffold0004 (11-109)||(333188-333289)
scaffold0004 (166-198)||(66237-66269)
[»] scaffold0711 (1 HSPs)
scaffold0711 (10-92)||(6896-6978)
[»] scaffold0322 (1 HSPs)
scaffold0322 (10-92)||(18698-18780)
[»] scaffold0149 (2 HSPs)
scaffold0149 (10-92)||(34257-34339)
scaffold0149 (166-204)||(21396-21434)
[»] scaffold0145 (2 HSPs)
scaffold0145 (11-77)||(10723-10789)
scaffold0145 (11-87)||(8145-8221)
[»] scaffold0077 (1 HSPs)
scaffold0077 (10-109)||(54811-54912)
[»] scaffold0026 (1 HSPs)
scaffold0026 (162-204)||(21978-22020)
[»] scaffold0574 (1 HSPs)
scaffold0574 (11-92)||(7212-7293)
[»] scaffold0278 (2 HSPs)
scaffold0278 (133-178)||(23842-23887)
scaffold0278 (11-92)||(8693-8774)
[»] scaffold0035 (2 HSPs)
scaffold0035 (11-92)||(107236-107317)
scaffold0035 (11-92)||(115737-115818)
[»] scaffold0481 (1 HSPs)
scaffold0481 (11-87)||(2-78)
[»] scaffold0439 (1 HSPs)
scaffold0439 (162-198)||(12103-12139)
[»] scaffold0230 (4 HSPs)
scaffold0230 (11-87)||(14822-14898)
scaffold0230 (10-92)||(22699-22781)
scaffold0230 (14-92)||(20527-20605)
scaffold0230 (162-190)||(6948-6976)
[»] scaffold0134 (1 HSPs)
scaffold0134 (11-87)||(38694-38770)
[»] scaffold0063 (1 HSPs)
scaffold0063 (11-87)||(38952-39028)
[»] scaffold0044 (1 HSPs)
scaffold0044 (11-87)||(41272-41348)
[»] scaffold0029 (1 HSPs)
scaffold0029 (11-87)||(12162-12238)
[»] scaffold0019 (2 HSPs)
scaffold0019 (11-87)||(158657-158733)
scaffold0019 (10-92)||(21933-22015)
[»] scaffold1792 (1 HSPs)
scaffold1792 (10-92)||(1119-1201)
[»] scaffold0716 (1 HSPs)
scaffold0716 (10-92)||(5455-5537)
[»] scaffold0546 (1 HSPs)
scaffold0546 (9-87)||(7909-7987)
[»] scaffold0535 (1 HSPs)
scaffold0535 (10-92)||(7545-7627)
[»] scaffold0191 (1 HSPs)
scaffold0191 (10-92)||(3581-3663)
[»] scaffold0113 (1 HSPs)
scaffold0113 (162-204)||(35348-35390)
[»] scaffold0109 (2 HSPs)
scaffold0109 (9-87)||(5320-5398)
scaffold0109 (9-87)||(17-95)
[»] scaffold0747 (1 HSPs)
scaffold0747 (10-91)||(1470-1551)
[»] scaffold0454 (1 HSPs)
scaffold0454 (11-87)||(455-531)
[»] scaffold0444 (1 HSPs)
scaffold0444 (11-87)||(14266-14342)
[»] scaffold0363 (1 HSPs)
scaffold0363 (11-87)||(10118-10194)
[»] scaffold0359 (1 HSPs)
scaffold0359 (11-111)||(16282-16385)
[»] scaffold0123 (1 HSPs)
scaffold0123 (11-75)||(25986-26050)
[»] scaffold0101 (1 HSPs)
scaffold0101 (11-75)||(476-540)
[»] scaffold0081 (1 HSPs)
scaffold0081 (10-78)||(4003-4071)
[»] scaffold0008 (1 HSPs)
scaffold0008 (11-75)||(72566-72630)
[»] scaffold1419 (1 HSPs)
scaffold1419 (10-92)||(928-1009)
[»] scaffold1296 (1 HSPs)
scaffold1296 (10-92)||(2015-2097)
[»] scaffold0555 (1 HSPs)
scaffold0555 (162-204)||(8951-8993)
[»] scaffold0205 (1 HSPs)
scaffold0205 (166-204)||(5774-5812)
[»] scaffold0146 (1 HSPs)
scaffold0146 (9-86)||(22962-23040)
[»] scaffold0061 (2 HSPs)
scaffold0061 (162-204)||(14740-14782)
scaffold0061 (162-204)||(23798-23840)
[»] scaffold0046 (3 HSPs)
scaffold0046 (162-204)||(21931-21973)
scaffold0046 (11-92)||(16085-16166)
scaffold0046 (11-92)||(25272-25353)
[»] scaffold0043 (1 HSPs)
scaffold0043 (10-92)||(10745-10827)
[»] scaffold0708 (1 HSPs)
scaffold0708 (9-78)||(1604-1673)
[»] scaffold0072 (1 HSPs)
scaffold0072 (9-92)||(58707-58787)
[»] scaffold0695 (1 HSPs)
scaffold0695 (11-87)||(6817-6893)
[»] scaffold0594 (1 HSPs)
scaffold0594 (166-198)||(2102-2134)
[»] scaffold0256 (1 HSPs)
scaffold0256 (172-204)||(2005-2037)
[»] scaffold0138 (1 HSPs)
scaffold0138 (9-61)||(17363-17415)
[»] scaffold0122 (1 HSPs)
scaffold0122 (11-87)||(33837-33913)
[»] scaffold0053 (1 HSPs)
scaffold0053 (12-92)||(60697-60777)
[»] scaffold0042 (1 HSPs)
scaffold0042 (12-92)||(43169-43249)
[»] scaffold0031 (1 HSPs)
scaffold0031 (11-87)||(56220-56296)
[»] scaffold0028 (5 HSPs)
scaffold0028 (11-87)||(135085-135161)
scaffold0028 (11-87)||(137554-137630)
scaffold0028 (11-87)||(140023-140099)
scaffold0028 (11-87)||(142492-142568)
scaffold0028 (11-87)||(144961-145037)
[»] scaffold0022 (1 HSPs)
scaffold0022 (11-75)||(128098-128162)


Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 14978533 - 14978736
Alignment:
Q  1 tcgtcagaattaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14978533 tcgtcagaattaaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaacatgttggaggtttagtttgagaattg 14978632  T
Q  101 ggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggtta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14978633 ggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggtta 14978732  T
Q  201 agtt 204  Q
    ||||    
T  14978733 agtt 14978736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 25618890 - 25619092
Alignment:
Q  1 tcgtcagaattaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25618890 tcgtcagaattaaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaacatgttggaggtttagtttgagaattg 25618989  T
Q  101 ggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggtta 200  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25618990 ggaattagg-tttccattgttgagtttgattaggaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggtta 25619088  T
Q  201 agtt 204  Q
    ||||    
T  25619089 agtt 25619092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 20556033 - 20556227
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| ||||||||||||| ||||||  | | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  20556033 ttaaggtaagggtgggactaacattcaattttcttacacctatgattctgatgattagatttaacatgttggatgtttagtttgagaattgggaattagg 20556132  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20556133 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 20556227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 611771 - 611657
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||| |||||||||| ||||||||    
T  611771 tttgggaattgagaattaggttttccattgttgagttcgattagaaaagtgtagaaaccatgacaattgtgttaggaattaatgttcaggtggtagaata 611672  T
Q  190 atcataggttaagtt 204  Q
    |||||||||||||||    
T  611671 atcataggttaagtt 611657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 18697483 - 18697380
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg-gaatta 107  Q
    ||||||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  18697483 ttaaggtaagggtgggactagcattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagttttgagaattggagaatta 18697384  T
Q  108 ggtt 111  Q
    ||||    
T  18697383 ggtt 18697380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 18707234 - 18707131
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg-gaatta 107  Q
    ||||||||||||||| |||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  18707234 ttaaggtaagggtgggactagcattcaatcttcttaagcccatgattctgataattagatttaacatgttggaggtttagttttgagaattggagaatta 18707135  T
Q  108 ggtt 111  Q
    ||||    
T  18707134 ggtt 18707131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 20137626 - 20137527
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgggaattagg 109  Q
    ||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  20137626 taaggaaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttagttttgagaatttggaattagg 20137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 22195243 - 22195342
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgggaattagg 109  Q
    ||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  22195243 taaggaaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttagttttgagaatttggaattagg 22195342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 13765275 - 13765204
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13765275 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 13765204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 23225981 - 23226052
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23225981 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 23226052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 23956791 - 23956720
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23956791 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 23956720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 17229064 - 17229145
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| |||||||||||    
T  17229064 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctaataattagatttaacatgttgtaggtttagttt 17229145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 18454179 - 18454102
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttta 88  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||    
T  18454179 taaggtaagggtgggactaacattcaatcttcttaagcatatgattctgataattagatttaacatgttgtaggttta 18454102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 31021845 - 31021916
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31021845 gaaaagtgtagaaactatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 31021916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 23415954 - 23415762
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||| |   |  |||||||||| |||    ||  ||| || |||||||| |||||    
T  23415954 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctaaatttgtgatttaacatattgttc-ttaggttggataattggga-ttagg 23415857  T
Q  110 ttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||  ||| |||| ||| || | |||||| ||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  23415856 ttttg-attattgatttttgaattgaaaagcgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtt 23415762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 22792430 - 22792520
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattg 100  Q
    |||||||||||||  ||||||||||||| ||||||||||| |  ||||||| ||||||||||||| |||| |||||||| |||||||||||    
T  22792430 taaggtaagggtgagactaacattcaattttcttaagcttatatttctgatgattagatttaacaagttgtaggtttagttttgagaattg 22792520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 23527299 - 23527381
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||| |||||||| ||||||||| ||| |||||||| |||||||||||||||||  ||| |||||||    
T  23527299 ttaaggtaagggtgggactagcattcaattttcttaagcctgtaattctgatgattagatttaacatgttataggattagttt 23527381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 27557715 - 27557520
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaatta 107  Q
    ||||| ||||||||  ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| |||    
T  27557715 ttaagctaagggtgagactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattggga-tta 27557617  T
Q  108 ggttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
     |||||  ||| |||| ||| || | |||||||||||||||||  | ||||||||||| |||||| |||||||||||||||||| |||||||| ||||    
T  27557616 tgttttg-attattgatttttgaattgaaaagtgtagaaaccaacgaaattgtgttaataattgaagttcaggttgtagaataaacataggttgagtt 27557520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 19363416 - 19363318
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt--gagaattgggaatta 107  Q
    ||||||||||||||  ||||||||||||| ||||||||| | ||||||||   |||||||||||||||||| ||| |||||||  ||||||||| |||||    
T  19363416 ttaaggtaagggtgagactaacattcaattttcttaagcctatgattctg---attagatttaacatgttgtaggattagttttggagaattggaaatta 19363320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 8226740 - 8226806
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| ||||||||||||    
T  8226740 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctga-aattggatttaacatgt 8226806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 12943058 - 12942987
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||| |||||||||||  ||||||| ||||    
T  12943058 gaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaataaatataggttgagtt 12942987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 23531896 - 23531962
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| ||||||||||||    
T  23531896 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctga-aattggatttaacatgt 23531962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 28288630 - 28288701
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  28288630 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 28288701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 17027863 - 17027945
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  17027863 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 17027945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 25536058 - 25535976
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  25536058 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 25535976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 25689476 - 25689394
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  25689476 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 25689394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 25721148 - 25721066
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  25721148 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 25721066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 25753491 - 25753409
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  25753491 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 25753409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 25755661 - 25755579
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  25755661 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 25755579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 34964023 - 34963941
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  34964023 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 34963941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 17201080 - 17201129
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctga 60  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||    
T  17201080 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctga 17201129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 18895484 - 18895583
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaatt 106  Q
    |||||||||||||||  ||||||||||||| ||||||||| | ||||| ||   ||||||||||||| |||| ||| ||||  |||||||||||| ||||    
T  18895484 attaaggtaagggtgagactaacattcaattttcttaagcctatgattttg---attagatttaacaagttgtaggattagtttttgagaattggaaatt 18895580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 33444016 - 33443947
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||||  |||||||||||||  |||||||||  | |||||||| ||||||||||||||||    
T  33444016 attaaggtaagggtgagactaacattcaattctcttaagctgataattctgatgattagatttaacatgt 33443947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 12743268 - 12743192
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  12743268 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 12743192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 18333806 - 18333882
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  18333806 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 18333882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 18343139 - 18343063
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  18343139 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 18343063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 24423495 - 24423419
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  24423495 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 24423419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 33862745 - 33862669
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  33862745 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 33862669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 33865226 - 33865150
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  33865226 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 33865150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 8055978 - 8055877
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaa-ttgggaatta 107  Q
    |||||||||||||| |||||||||||||  |||| ||  | |||||| || ||||  ||||||||||||| ||||||||  |||||||| ||||||||||    
T  8055978 taaggtaagggtgggactaacattcaataatcttgagtctatgattccgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgggaatta 8055879  T
Q  108 gg 109  Q
    ||    
T  8055878 gg 8055877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 13612432 - 13612350
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||| |||||||||| ||||||| |||||  || ||||  ||| ||||||||||||  ||||||||||||| |||||||||||    
T  13612432 ttaatgtaagggtgggactaacaatcaattctcctaagtctgtaattctgataattgtatttaacatgttgtaggtttagttt 13612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 17882710 - 17882811
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaa-ttgggaatta 107  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||||||  |||||||| ||||||||||    
T  17882710 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgcatttaacatgttgtaggtttagtttttgagaatttgggaatta 17882809  T
Q  108 gg 109  Q
    ||    
T  17882810 gg 17882811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 18914967 - 18914886
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| | ||  ||||||||| ||||  ||||||||||||| |||||||||||    
T  18914967 ttaaggtaagggtgggactaacattcaataatcttgatcta-tgattctgaaaattgtatttaacatgttgtaggtttagttt 18914886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 23993072 - 23992990
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | | ||||||| ||||  ||||||||||||| |||||||||||    
T  23993072 ttaaggtaagggtgggactaacattcaataatcttgagtctataattctgaaaattgtatttaacatgttgtaggtttagttt 23992990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 16198447 - 16198366
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  16198447 taaggtaagggtgtgactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 16198366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 31629861 - 31629942
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  31629861 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 31629942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 1599082 - 1599002
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| || ||||||||    
T  1599082 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtagatttagttt 1599002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 16447754 - 16447818
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  16447754 taaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 16447818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 19858136 - 19858212
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| ||||||| |||||| ||||||    
T  19858136 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaagatgttgtaggttt 19858212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 22783176 - 22783100
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||||    
T  22783176 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttt 22783100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 26923659 - 26923735
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| ||||  ||||||||||||| ||||||    
T  26923659 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaacatgttgtaggttt 26923735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 29045158 - 29045126
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggt 198  Q
    |||||||||||||||||||||||||||||||||    
T  29045158 aattgatgttcaggttgtagaataatcataggt 29045126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 21119807 - 21119870
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    ||||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  21119807 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 21119870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 30676038 - 30676120
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||||||| ||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  30676038 ttaaggtaagggtgagactaacatgcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 30676120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 3850996 - 3851060
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||   || |||||||| |||| ||||||||    
T  3850996 taaggtaagggtgagactaacattcaatcttattaagtccgtaattctgatgattaaatttaaca 3851060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 18585577 - 18585549
Alignment:
Q  162 taagaattgatgttcaggttgtagaataa 190  Q
    |||||||||||||||||||||||||||||    
T  18585577 taagaattgatgttcaggttgtagaataa 18585549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 19102462 - 19102526
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||   || |||||||| |||| ||||||||    
T  19102462 taaggtaagggtgagactaacattcaatcttattaagtcagtaattctgatgattaaatttaaca 19102526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 13880528 - 13880731
Alignment:
Q  1 tcgtcagaattaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13880528 tcgtcagaattaaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaacatgttggaggtttagtttgagaattg 13880627  T
Q  101 ggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggtta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13880628 ggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggtta 13880727  T
Q  201 agtt 204  Q
    ||||    
T  13880728 agtt 13880731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 48521465 - 48521361
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg-gaatt 106  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  48521465 attaaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataattagatttaacatgttggaggtttagttttgagaattggagaatt 48521366  T
Q  107 aggtt 111  Q
    |||||    
T  48521365 aggtt 48521361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 204
Target Start/End: Original strand, 22130024 - 22130220
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataatta-gatttaacatgttggaggt-ttag-tttgagaattgggaat 105  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||| | ||| ||||||||||||||  | | |||| ||||| ||||| || |    
T  22130024 attaaggtaagggtgggactaacattcaatcttcttaagcctatgattctga-atttatgatttaacatgttgttgttcttaggtttgataattgtga-t 22130121  T
Q  106 taggttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||  ||| |||| ||| || | ||||||||||||||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22130122 taggttttg-attattgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgttaaggttgtagaataatcataggttaagtt 22130220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 45574020 - 45574214
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaattag 108  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||| |   |  ||||||||||||||  | | |||| ||| | |||||||| ||||    
T  45574020 taaggtaagggtgggactaacattcaatcttcttaagcctatgattcttaatttgtgatttaacatgttgttgttcttaggttggataattggga-ttag 45574118  T
Q  109 gttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||  ||| |||| ||| || | |||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45574119 gttttg-attattgatttttgaattgaaaagtgcagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 45574214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 14801442 - 14801299
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaatt--gggaatta 107  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||  ||||| ||||||| |||||||| |||| |||||  || |||||    
T  14801442 taaggtaaaggtgggactaacattcaatcttcttaagcctgtgattctgataattgcatttagcatgttgtaggtttagttttgggaatttgggaaatta 14801343  T
Q  108 ggttttccattgttgagtttgattagaaaagtgtagaaaccatg 151  Q
    ||||||| || ||| | ||||||||||  |||||||||||||||    
T  14801342 ggttttctatggttaattttgattagatgagtgtagaaaccatg 14801299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 14810316 - 14810173
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaatt--gggaatta 107  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||  ||||| ||||||| |||||||| |||| |||||  || |||||    
T  14810316 taaggtaaaggtgggactaacattcaatcttcttaagcctgtgattctgataattgcatttagcatgttgtaggtttagttttgggaatttgggaaatta 14810217  T
Q  108 ggttttccattgttgagtttgattagaaaagtgtagaaaccatg 151  Q
    ||||||| || ||| | ||||||||||  |||||||||||||||    
T  14810216 ggttttctatggttaattttgattagatgagtgtagaaaccatg 14810173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 20959081 - 20959000
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| |||||||||||    
T  20959081 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgaaggtttagttt 20959000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 21042505 - 21042586
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||||    
T  21042505 taaggtaagggtgggactaacattcaatcttcttaagcctatgattatgataattagatttaacatgttgtaggtttagttt 21042586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 22125250 - 22125150
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattag 108  Q
    |||||||||||||| | ||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| ||||  |||||||||||| ||||||    
T  22125250 taaggtaagggtgggagtaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattggaaattag 22125151  T
Q  109 g 109  Q
    |    
T  22125150 g 22125150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 297284 - 297213
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  297284 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtt 297213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 20058449 - 20058382
Alignment:
Q  95 gaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgtt 162  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  20058449 gaattgggaattaggttttccattgttgatttcgattagaaaagtgtagaaaccatggcaattgtgtt 20058382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 28313277 - 28313206
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28313277 gaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtt 28313206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 47191554 - 47191472
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| ||||||||||| | ||||||||| | |||||||||| |||||||||||||||||| ||| |||||||    
T  47191554 ttaaggtaagggtgggactaacattcagttttcttaagcctatgattctgatgattagatttaacatgttgtaggattagttt 47191472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 20453635 - 20453711
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtt 86  Q
    ||||||||||||||  ||||||||||||||||||||||| | ||||| |||||||||||||||||||| || |||||    
T  20453635 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattttgataattagatttaacatgctgtaggtt 20453711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 52940026 - 52940108
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||| |||  ||||||||||||||||||||||| | | |||||||| |||||||||||||||||| ||| |||||||    
T  52940026 ttaaggtaagagtgagactaacattcaatcttcttaagcctttaattctgatgattagatttaacatgttgtagggttagttt 52940108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 22777414 - 22777315
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagc-ttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    |||||| ||||||  ||||||||||||| ||||||||| || | |||||||| ||||||||||||| |||| ||||||| |||||||||||  |||||||    
T  22777414 taaggttagggtgagactaacattcaattttcttaagccttataattctgatgattagatttaacaagttgtaggtttaatttgagaattgaaaattagg 22777315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 23194667 - 23194707
Alignment:
Q  164 agaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23194667 agaattgatgttcaggttgtagaataatcataggttaagtt 23194707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 46560132 - 46560049
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  46560132 attaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 46560049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 14237653 - 14237731
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||||| ||||| |||||||  |||||||  | ||||||||| |||| |||||||||||||| ||||||    
T  14237653 attaaggtaagggtgggactaatattcaataatcttaagtctatgattctgaaaattggatttaacatgttgtaggttt 14237731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 51083228 - 51083150
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||||| |||||||||||||  |||||||  | ||||| ||| |||| |||||||||||||| ||||||    
T  51083228 attaaggtaagggtgggactaacattcaataatcttaagtctatgattttgaaaattggatttaacatgttgtaggttt 51083150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 13989814 - 13989738
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  13989814 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 13989738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 16362868 - 16362792
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  16362868 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 16362792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 21922503 - 21922579
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  21922503 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 21922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 41373422 - 41373346
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  41373422 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 41373346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 48444443 - 48444367
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  48444443 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 48444367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 24723618 - 24723656
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24723618 aattggtgttcaggttgtagaataatcataggttaagtt 24723656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 22050350 - 22050431
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  22050350 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 22050431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 21474298 - 21474374
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||     |||||||| |||| |||||||||||||| ||||||    
T  21474298 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttt 21474374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 21683949 - 21683846
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaatta 107  Q
    ||||||||||||||  ||||||||||||| ||||||||  | | ||||||||  ||||||||||||  ||| ||| ||||  |||||||||||| ||||     
T  21683949 ttaaggtaagggtgagactaacattcaattttcttaagtctataattctgatggttagatttaacaacttgtagggttagtttttgagaattggaaattc 21683850  T
Q  108 ggtt 111  Q
    ||||    
T  21683849 ggtt 21683846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 21841719 - 21841643
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  21841719 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 21841643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 22122168 - 22122248
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  22122168 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 22122248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 23592944 - 23593020
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||     |||||||| |||| |||||||||||||| ||||||    
T  23592944 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttt 23593020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 31613389 - 31613309
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||| ||||| |||||||||||||  |||| || |||||||| ||| ||||  |||||| |||||| |||||||||||    
T  31613389 aaggtaatggtgggactaacattcaataatcttgagtttgtgattgtgaaaattgtatttaatatgttgtaggtttagttt 31613309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 41230941 - 41231021
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| | |||||||||    
T  41230941 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaagtttagttt 41231021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 43543546 - 43543461
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctg---ataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||   ||||||  ||||||||||||| |||||||||||    
T  43543546 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaataattgtatttaacatgttgtaggtttagttt 43543461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 7052171 - 7052209
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  7052171 aattggtgttcaggttgtaaaataatcataggttaagtt 7052209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 16274572 - 16274654
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||||||||||||  |||| ||  | ||||| ||| ||||  ||||||||||||| |||||||||||    
T  16274572 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 16274654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 43629294 - 43629352
Alignment:
Q  8 aattaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataatta 66  Q
    ||||||||||||||||  |||||||||||||||| |||||  ||| |||||||| ||||    
T  43629294 aattaaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgatta 43629352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 9044518 - 9044599
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  | ||||||||||| |||||||||||    
T  9044518 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtacttaacatgttgtaggtttagttt 9044599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 21243889 - 21243926
Alignment:
Q  160 gttaagaattgatgttcaggttgtagaataatcatagg 197  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  21243889 gttaataattggtgttcaggttgtagaataatcatagg 21243926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 29299083 - 29299002
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| |   | ||||||||| ||||  |||||| |||||| |||||||||||    
T  29299083 taaggtaagggtgggactaacattcaataatcttgaatctatgattctgaaaattgtatttaatatgttgtaggtttagttt 29299002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 6834060 - 6834028
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggt 198  Q
    ||||| |||||||||||||||||||||||||||    
T  6834060 aattggtgttcaggttgtagaataatcataggt 6834028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 17901960 - 17901992
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggt 198  Q
    ||||| |||||||||||||||||||||||||||    
T  17901960 aattggtgttcaggttgtagaataatcataggt 17901992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 13101 - 12907
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13101 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 13002  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13001 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtt 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 178; Significance: 3e-96; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 23802406 - 23802599
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattaggt 110  Q
    |||||||||||||  ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23802406 taaggtaagggtgagactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattaggt 23802505  T
Q  111 tttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23802506 tttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 23802599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 12611962 - 12611768
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12611962 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagtttgaaaattgggaattagg 12611863  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12611862 ttttccattgttgagtttgattagaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 12611768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 12 - 204
Target Start/End: Original strand, 51463031 - 51463223
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattaggtt 111  Q
    ||||||||||||  ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51463031 aaggtaagggtgagactaacattcaatcttcttaagcctatgattttgataattagatttaacatgttggaggtttagtttgaaaattgggaattaggtt 51463130  T
Q  112 ttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51463131 ttccattgttgagtttgattagaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggtaaagtt 51463223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 15344906 - 15344792
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  15344906 tttgggaattgggaattaggttttccattgttgagttcgattagaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcaggttgtagaata 15344807  T
Q  190 atcataggttaagtt 204  Q
    |||||||||||||||    
T  15344806 atcataggttaagtt 15344792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 15447458 - 15447572
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  15447458 tttgggaattgggaattaggttttccattgttgagttcgattagaaaagtgcagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaata 15447557  T
Q  190 atcataggttaagtt 204  Q
    |||||||||||||||    
T  15447558 atcataggttaagtt 15447572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 90 - 190
Target Start/End: Original strand, 13043850 - 13043950
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13043850 tttgggaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatagtaattgtgttaagaattgatgttcaggttgtagaata 13043949  T
Q  190 a 190  Q
    |    
T  13043950 a 13043950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 12841617 - 12841514
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg-gaatta 107  Q
    ||||||||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  12841617 ttaaggtaagggtgggactaacattcaatcttcttaagcccatgattctgataattagatttaacatgttggaggtttagttttgagaattggagaatta 12841518  T
Q  108 ggtt 111  Q
    ||||    
T  12841517 ggtt 12841514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 16277411 - 16277482
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16277411 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 16277482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 28386172 - 28386101
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28386172 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 28386101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 53387021 - 53387092
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  53387021 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 53387092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 15792747 - 15792646
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaatta 107  Q
    ||||||||||||||| ||||||||||||| ||||||||| | |||||||||| |||||||||||||||||| ||| ||||  |||||||||||| |||||    
T  15792747 ttaaggtaagggtgggactaacattcaattttcttaagcctatgattctgatgattagatttaacatgttgtaggattagtttttgagaattggaaatta 15792648  T
Q  108 gg 109  Q
    ||    
T  15792647 gg 15792646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 32306151 - 32306252
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaatta 107  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||| |||| |||||||||||||||||| ||| ||||  |||||||||||| |||||    
T  32306151 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattttgatgattagatttaacatgttgtagggttagtttttgagaattggaaatta 32306250  T
Q  108 gg 109  Q
    ||    
T  32306251 gg 32306252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 26049620 - 26049720
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattag 108  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||| |||| |||||||||||||||||| ||| ||||  |||||||||||| ||||||    
T  26049620 taaggtaagggtgggactaacattcaatcttcttaagcctatgattatgatgattagatttaacatgttgtagggttagtttttgagaattggaaattag 26049719  T
Q  109 g 109  Q
    |    
T  26049720 g 26049720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 18230669 - 18230598
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  18230669 gaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaggttgtaggataatcataggataagtt 18230598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 49547067 - 49547138
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  49547067 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 49547138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 33849671 - 33849600
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||  ||||||||||||||| |||||||| |||||||||||| |||||||| ||||    
T  33849671 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcatgttgtagaataaacataggttgagtt 33849600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 36038739 - 36038668
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  36038739 gaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 36038668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 14852023 - 14852105
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| | ||||||||||||||||||||||| | | |||||||| ||||||||||||| |||| ||| |||||||    
T  14852023 ttaaggtaagggttggactaacattcaatcttcttaagcctttaattctgatgattagatttaacaagttgtagggttagttt 14852105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 22354720 - 22354654
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| ||||||||||||    
T  22354720 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctga-aattggatttaacatgt 22354654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 15535050 - 15534979
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| ||| ||||    
T  15535050 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtt 15534979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 26790307 - 26790206
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattag 108  Q
    |||||||||||||  ||||||||||||| ||||||||  | ||||| |||| ||||||||||||||| || ||||||||  |||||||||| | ||||||    
T  26790307 taaggtaagggtgagactaacattcaattttcttaagtctatgattttgatgattagatttaacatg-tgtaggtttagtttttgagaatttgaaattag 26790209  T
Q  109 gtt 111  Q
    |||    
T  26790208 gtt 26790206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 19617394 - 19617476
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  19617394 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 19617476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 45005873 - 45005827
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcagg 179  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||    
T  45005873 gaaaagtgtagaaaccattgaaattgtgttaagaattgatgttcagg 45005827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 363215 - 363134
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  363215 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 363134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 12032985 - 12033061
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  12032985 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 12033061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 14717934 - 14718010
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  14717934 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 14718010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 15117566 - 15117642
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  15117566 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 15117642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 19243651 - 19243575
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  19243651 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 19243575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 29268304 - 29268228
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  29268304 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 29268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 52313595 - 52313515
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||||||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  52313595 aaggtaagggtgggactaacattcaataatcttaagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 52313515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 3485919 - 3485841
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    ||||| |||||||||  |||||||||||||  |||||||  | ||||||||| |||| |||||||||||||| ||||||    
T  3485919 attaatgtaagggtgagactaacattcaataatcttaagtctatgattctgaaaattggatttaacatgttgtaggttt 3485841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 14970026 - 14970108
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||||||||||||  |||| ||  ||||||||||| ||||  ||||||||||||  |||||||||||    
T  14970026 ttaaggtaagggtgagactaacattcaataatcttgagtctgtgattctgaaaattgtatttaacatgttataggtttagttt 14970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 15354846 - 15354928
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattaga-tttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||||||||  | |||||||||||| |||||||||||    
T  15354846 taaggtaagggtggaactaacattcaataatcttgagtctatgattctgataattttattttaacatgttgtaggtttagttt 15354928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 19434817 - 19434855
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  19434817 aattggtgttcaggttgtagaataatcataggttaagtt 19434855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 52872401 - 52872483
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| | |||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  52872401 ttaaggtaagggtgggattaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 52872483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 3515849 - 3515768
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  3515849 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 3515768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 17334251 - 17334182
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||||  |||| ||||||||  |||||||||  | |||||||| ||||||||||||||||    
T  17334251 attaaggtaagggtgagactagcattcaattctcttaagctgataattctgatgattagatttaacatgt 17334182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 44772297 - 44772373
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| ||||| |||||||| ||||||    
T  44772297 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattttacatgttgtaggttt 44772373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 50221552 - 50221628
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  50221552 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 50221628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 54797886 - 54797950
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  54797886 taaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 54797950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 14549544 - 14549506
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  14549544 aattggtgttcaggttgtagaataatcatatgttaagtt 14549506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 15489468 - 15489550
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| | |||||||||||  |||| ||  | | ||||||| ||||  ||||||||||||| |||||||||||    
T  15489468 ttaaggtaagggtgggaataacattcaataatcttgagtctataattctgaaaattgtatttaacatgttgtaggtttagttt 15489550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 16296765 - 16296727
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  16296765 aattggtgttcaggttgttgaataatcataggttaagtt 16296727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 35660782 - 35660744
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  35660782 aattggtgttcaggttgtagaataatcatatgttaagtt 35660744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 14281317 - 14281256
Alignment:
Q  14 ggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    ||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  14281317 ggtaagggtgagactaacattcaatcttattaagtatgtaattctgatgattaaatttaaca 14281256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 18214524 - 18214605
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||| |||| |||||||||||||  |||| ||  | ||||||||  ||||  ||||||||||||| |||||||||||    
T  18214524 taaggtaagcgtgggactaacattcaataatcttgagtctatgattctgcaaattgtatttaacatgttgtaggtttagttt 18214605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 11773 - 11849
Alignment:
Q  16 taagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  11773 taagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 11849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 7640400 - 7640476
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||||    
T  7640400 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttt 7640476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 14873299 - 14873375
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| ||||| |||||||  |||||||     |||||||| |||| |||||||||||||| ||||||    
T  14873299 taaggtaagggtgggactaaaattcaataatcttaagtcatagattctgaaaattggatttaacatgttgtaggttt 14873375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 18238826 - 18238902
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||  |||| |||||||||||||| ||||||    
T  18238826 taaggtaagggtgagactaacattcaataatcttaagtcattgattctggaaattggatttaacatgttgtaggttt 18238902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 53081303 - 53081367
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||| ||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  53081303 taaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaaca 53081367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 42348 - 42154
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42348 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggacgtttagtttgagaattgggaattagg 42249  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42248 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtt 42154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 175; Significance: 2e-94; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 50243864 - 50243670
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50243864 ttaaggtaagggtgagactaacattcaatcttcttaagcctgtgattctcataattagatttaacatgttggaggtttagtttgagaattgggaattagg 50243765  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50243764 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtt 50243670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 24152385 - 24152579
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  24152385 ttaaggtaagggtgggactaacattcaatcttcctaagcctatgattctgataattagatttaacatgttggaggtttaatttgagatttgggaattagg 24152484  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24152485 ttttccattgttgagtttgattataaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 24152579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 16644080 - 16643942
Alignment:
Q  64 ttagatttaacatgttggaggtttagtttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgtta 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  16644080 ttagatttaacatgttggaggtttagtttgagaattgggaattaggttttccattgttcagtttgattagaaaagtgtagaaaccatgataattgtgtta 16643981  T
Q  164 agaattgatgttcaggttgtagaataatcataggttaag 202  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16643980 agaattgatgttcaggttgtagaataatcataggttaag 16643942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 6820133 - 6820027
Alignment:
Q  98 ttgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcatagg 197  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  6820133 ttgggaattaggttttccattgttgagttcgattagaaaagtgtagaaactatgtcaattgtgttaagaattgatgttcaggttgtagaataatcatagg 6820034  T
Q  198 ttaagtt 204  Q
    |||||||    
T  6820033 ttaagtt 6820027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 43929361 - 43929248
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||    
T  43929361 tttgggaattgggaattaggttttccattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtagaata 43929263  T
Q  190 atcataggttaagtt 204  Q
    ||| |||||||||||    
T  43929262 atcgtaggttaagtt 43929248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 325131 - 325028
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg-gaatta 107  Q
    ||||||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  325131 ttaaggtaagggtgggactagcattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagttttgagaattggagaatta 325032  T
Q  108 ggtt 111  Q
    ||||    
T  325031 ggtt 325028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 55291725 - 55291796
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55291725 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 55291796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 42456 - 42385
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42456 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 42385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 5224376 - 5224180
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataatta-gatttaacatgttggaggt-ttagttt-gagaattgggaat 105  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||| | ||| ||||||||||||||  | | |||| || || |||||||| |    
T  5224376 attaaggtaagggtgggactaacattcaatcttcttaagcctatgattctga-atttatgatttaacatgttgttgttcttaggttagataattggga-t 5224279  T
Q  106 taggttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||  ||| |||| ||| || | |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  5224278 taggttttg-attattgatttttgaattgaaaagtgtagaaaccattgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtt 5224180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 10555235 - 10555164
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10555235 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 10555164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 43549779 - 43549850
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43549779 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 43549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 44495588 - 44495486
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg-gaattag 108  Q
    |||||||||||||| ||||||||||||||||||||||  | ||||| ||||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  44495588 taaggtaagggtgggactaacattcaatcttcttaagtctatgattatgataattagatttaacatattggaggtttagttttgagaattggagaattag 44495489  T
Q  109 gtt 111  Q
    |||    
T  44495488 gtt 44495486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 46722710 - 46722781
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46722710 gaaaagtgtggaaactatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 46722781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 9578598 - 9578516
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| |||||||    
T  9578598 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagttt 9578516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 16645020 - 16644951
Alignment:
Q  3 gtcagaattaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagattta 72  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  16645020 gtcagaattaaggtaagggtgggactaacattcaatcttcttaagcctgtgtttctgataattagattta 16644951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 16324666 - 16324735
Alignment:
Q  135 aaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  16324666 aaagtgtagaaaccattgaaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtt 16324735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 32402182 - 32402263
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||||||||||| |||||||| |||||||||||||||| | |||||||||||    
T  32402182 taaggtaagggtgggactaacattcaattctcttaagcttgtaattctgatgattagatttaacatgtcgtaggtttagttt 32402263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 10833429 - 10833500
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | ||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  10833429 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtccagattgcagaataatcataggttaagtt 10833500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 11202274 - 11202192
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||| |||||||||||||||||  | |||||||||||||||||||||||||||| ||||| ||||||    
T  11202274 ttaaggtaagggtgagactagcattcaatcttcttaagtctatgattctgataattagatttaacatgttagaggtgtagttt 11202192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 15466131 - 15465952
Alignment:
Q  26 actaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaattaggttttccattgttga 123  Q
    ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| |||||||||  ||| ||||    
T  15466131 actaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattggga-ttaggttttg-attattga 15466034  T
Q  124 gttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
     ||| || | |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  15466033 tttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtt 15465952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 3803742 - 3803671
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  3803742 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 3803671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 12305991 - 12305920
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  12305991 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 12305920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 13437167 - 13437096
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||  | ||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  13437167 gaaaagtgtagaaaccaacgaaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtt 13437096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 15207888 - 15207797
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattg 100  Q
    ||||||||||||||  ||||||||||||| ||||||| ||| | |||||||| ||||||||||||| |||| |||||||| |||||||||||    
T  15207888 ttaaggtaagggtgagactaacattcaattttcttaaacttataattctgatgattagatttaacaagttgtaggtttagttttgagaattg 15207797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 18893610 - 18893540
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||| |||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  18893610 gaaaagtgtaaaaac-atcgtaattgtgttaagaattgatgttcacgttgtggaataatcataggttaagtt 18893540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 29544157 - 29544228
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  29544157 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 29544228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 54521691 - 54521620
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||  ||||||| ||||    
T  54521691 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaatataggttgagtt 54521620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 18890331 - 18890281
Alignment:
Q  154 aattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18890331 aattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtt 18890281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 26054434 - 26054629
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggag--gtttagtttgagaattgggaatta 107  Q
    ||||||||||||||  ||||||||||||| ||||||||| | |||||||||   |  ||||||||||||||  |  |||  ||| || ||||| || |||    
T  26054434 ttaaggtaagggtgagactaacattcaatattcttaagcctatgattctgaatttgtgatttaacatgttgttgttgttaggttggataattgaga-tta 26054532  T
Q  108 ggttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||  ||| |||| ||| || | ||||| |||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  26054533 ggttttg-attattgatttttgaattgaaaattgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtt 26054629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 22146768 - 22146834
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| ||||||||||||    
T  22146768 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctga-aattggatttaacatgt 22146834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 37641504 - 37641570
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| ||||||||||||    
T  37641504 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctga-aattggatttaacatgt 37641570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 24514326 - 24514244
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  24514326 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 24514244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 6468347 - 6468424
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    ||||||||||||||| | |||||||||||  |||||||    ||||||||| ||||||||||||||||||| ||||||    
T  6468347 ttaaggtaagggtgggagtaacattcaataatcttaagtcattgattctgaaaattagatttaacatgttgtaggttt 6468424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 12119185 - 12119266
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  12119185 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 12119266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 15266111 - 15266042
Alignment:
Q  32 attcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattg 100  Q
    ||||||| ||||||||||| | |||||||| ||||||||||||| |||| |||||||| |||||||||||    
T  15266111 attcaattttcttaagcttataattctgatgattagatttaacaagttgtaggtttagttttgagaattg 15266042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 7780559 - 7780635
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  7780559 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 7780635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 10246936 - 10247012
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  10246936 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 10247012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 13919821 - 13919753
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    ||||||||||||||  |||||||||||||  |||||||||  | |||||||| ||||||||||||||||    
T  13919821 ttaaggtaagggtgagactaacattcaattctcttaagctgataattctgatgattagatttaacatgt 13919753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 13937295 - 13937375
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  13937295 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 13937375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 15978483 - 15978407
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  15978483 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 15978407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 17464126 - 17464050
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  17464126 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 17464050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 34160274 - 34160198
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  34160274 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 34160198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 41124780 - 41124700
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  41124780 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 41124700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 13522202 - 13522267
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatg 77  Q
    |||||||||||||| |||| |||||||||||||||||| | ||||||||| ||||  ||||||||||    
T  13522202 taaggtaagggtgggactagcattcaatcttcttaagcctatgattctga-aattgaatttaacatg 13522267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 20629511 - 20629593
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||| ||| |||||||||||    
T  20629511 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatattgtaggtttagttt 20629593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 46823104 - 46823022
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| |||   ||||||||||||| |||||||||||    
T  46823104 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaatcgtatttaacatgttgtaggtttagttt 46823022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 55318623 - 55318705
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| | |||||||||    
T  55318623 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaagtttagttt 55318705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 13151002 - 13151078
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||     |||||||| |||| |||||||||||||| ||||||    
T  13151002 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttt 13151078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 13153470 - 13153546
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||     |||||||| |||| |||||||||||||| ||||||    
T  13153470 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttt 13153546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 13938301 - 13938381
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| | |||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  13938301 aaggtaagggtgggaataacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 13938381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 16453489 - 16453565
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| ||||||| |||||| ||||||    
T  16453489 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatatgttgtaggttt 16453565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 17444084 - 17444164
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  17444084 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 17444164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 21619452 - 21619388
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  21619452 taaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 21619388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 38961158 - 38961238
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  38961158 aaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 38961238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 45577655 - 45577731
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  45577655 taaggtaagggtgagactaacattcaataatcttaagtaattgattctgaaaattggatttaacatgttgtaggttt 45577731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 55477440 - 55477364
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  55477440 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 55477364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 14604914 - 14604815
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgggaattagg 109  Q
    |||||||||||||| ||||| |||||||  |||||||    ||||||||| ||||  ||||||| ||||| || ||||| |||||||||| |||||||||    
T  14604914 taaggtaagggtgggactaatattcaattatcttaagtcattgattctgaaaattgtatttaacttgttgtagctttagttttgagaatttggaattagg 14604815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 52465371 - 52465418
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattct 58  Q
    |||||||||||||  ||||||||||||||||||||||| | |||||||    
T  52465371 taaggtaagggtgtgactaacattcaatcttcttaagcctatgattct 52465418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 6805085 - 6805123
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  6805085 aattggtgttcaggttgtagaataatcatatgttaagtt 6805123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 10379982 - 10379900
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| || ||||||||    
T  10379982 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtagatttagttt 10379900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 45803491 - 45803533
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||    
T  45803491 taagaattgatgtccaggttgtagaataaacataggttgagtt 45803533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 36167602 - 36167537
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    ||||||||||||||  |||||||||||||||| |||||  ||| || ||||| |||| ||||||||    
T  36167602 ttaaggtaagggtgagactaacattcaatcttattaagtctgtaatcctgatgattaaatttaaca 36167537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 43549659 - 43549696
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagc 48  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  43549659 taaggttagggtgggactaacattcaatcttcttaagc 43549696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 1864367 - 1864443
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||     |||||||  |||| |||||||||||||| ||||||    
T  1864367 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctggaaattggatttaacatgttgtaggttt 1864443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 13522502 - 13522530
Alignment:
Q  162 taagaattgatgttcaggttgtagaataa 190  Q
    |||||||||||||||||||||||||||||    
T  13522502 taagaattgatgttcaggttgtagaataa 13522530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 16282079 - 16282159
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  16282079 aaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 16282159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 28847833 - 28847909
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| ||||| |||||||  |||||||     |||||||| |||| |||||||||||||| ||||||    
T  28847833 taaggtaagggtgggactaatattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttt 28847909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 48631230 - 48631202
Alignment:
Q  162 taagaattgatgttcaggttgtagaataa 190  Q
    |||||||||||||||||||||||||||||    
T  48631230 taagaattgatgttcaggttgtagaataa 48631202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 5e-92; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 18455589 - 18455783
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18455589 ttaaggtaagggtgggactaacattcaatcttcttaagcatatgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 18455688  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  18455689 ttttccattattgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtt 18455783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 16463040 - 16462926
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  16463040 tttgggaattgggaattaggttttccattgttgagttcgattagaaatgtgtagaaacgatggcaattgtgttaagaattgatgttcaggttgtagaata 16462941  T
Q  190 atcataggttaagtt 204  Q
    ||||||| |||||||    
T  16462940 atcatagattaagtt 16462926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 39431268 - 39431378
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  39431268 tttgggaattgggaattaggttttccattcttgacttcgattagaaaagtgtagaaaccatgtcaattgtgttaagaattgatgttcaggttgtagaata 39431367  T
Q  190 atcataggtta 200  Q
    |||||| ||||    
T  39431368 atcatatgtta 39431378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 44190297 - 44190411
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||  ||||| ||||||||||||||||||||||||||||||    
T  44190297 tttgggaattgggaattaagttttccattgttgagttcgattagaaaagtgaagaaaacatgacaattgagttaagaattgatgttcaggttgtagaata 44190396  T
Q  190 atcataggttaagtt 204  Q
    |||||||||||||||    
T  44190397 atcataggttaagtt 44190411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 99 - 204
Target Start/End: Original strand, 13864452 - 13864557
Alignment:
Q  99 tgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggt 198  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||| ||||| |||||||||||||    
T  13864452 tgggaattaggttttccattgttgagttcgattagaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcagattgtataataatcataggt 13864551  T
Q  199 taagtt 204  Q
    ||||||    
T  13864552 taagtt 13864557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 23557504 - 23557404
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  23557504 tttgggaattggaaattaggttttccattgttgagttcgattagaaaagtgtagaaaccatgacaattgtgttatgaattgatgttcaggttgtagaata 23557405  T
Q  190 a 190  Q
    |    
T  23557404 a 23557404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 4326067 - 4325953
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||| || |||||||||||| |||||| | ||||||||||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  4326067 tttgggaatgggaaattaggttttctattgttaattttgattagatgagtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaata 4325968  T
Q  190 atcataggttaagtt 204  Q
    |||||||||||||||    
T  4325967 atcataggttaagtt 4325953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 23556315 - 23556215
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||| ||||||||||| |||||||||||||    
T  23556315 tttgggaattgggaattaggttttccattgttgagttcgattagaaaagtgtagaaaccatgacaatcgtgttatgaattgatgttaaggttgtagaata 23556216  T
Q  190 a 190  Q
    |    
T  23556215 a 23556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 14105551 - 14105622
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14105551 gaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 14105622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 14415568 - 14415639
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14415568 gaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 14415639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 17505088 - 17505159
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17505088 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 17505159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 17548126 - 17548055
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17548126 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 17548055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 13648333 - 13648142
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaattag 108  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | ||||| || ||||    
T  13648333 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattgaga-ttag 13648235  T
Q  109 gttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaa 201  Q
    |||||  ||| |||| ||| || | ||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||||||||    
T  13648234 gttttg-attattgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaa 13648142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 1856401 - 1856595
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaattag 108  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| ||||    
T  1856401 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattggga-ttag 1856499  T
Q  109 gttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||  ||| |||| ||| || | |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  1856500 gttttg-attattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtt 1856595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 204
Target Start/End: Original strand, 13917573 - 13917767
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaattag 108  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| ||||    
T  13917573 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattggga-ttag 13917671  T
Q  109 gttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||  ||| |||| ||| || | |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  13917672 gttttg-attattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtt 13917767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 204
Target Start/End: Original strand, 25926301 - 25926494
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaattagg 109  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| |||||    
T  25926301 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaatttctgatttaacatgttgttgttcttaggttggataattggga-ttagg 25926399  T
Q  110 ttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||  ||| |||| ||| || | |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  25926400 ttttg-attattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttcagtt 25926494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 16997145 - 16997063
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| |||||||    
T  16997145 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagttt 16997063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 38519732 - 38519654
Alignment:
Q  14 ggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| |||||||||||    
T  38519732 ggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttagcatgttgtaggtttagttt 38519654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 37793391 - 37793492
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| |||||||||||||||||||||||   | |||||||| ||||||||||||| |||| ||||||||||||  |||||| |||||||    
T  37793391 ttaaggtaagggtgggactaacattcaatcttcttaagccgttaattctgatgattagatttaacaagttgtaggtttagtttggaaattggaaattagg 37793490  T
Q  110 tt 111  Q
    ||    
T  37793491 tt 37793492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 42462923 - 42462842
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| |||||||    
T  42462923 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagttt 42462842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 14188417 - 14188488
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||| ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14188417 gaaatgtgtagaaaccatcgaaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtt 14188488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 129943 - 130042
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattag 108  Q
    |||||||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| | | ||||  |||||||||||| ||||||    
T  129943 taaggtaagggtgggactaacattcaatct-cttaagcttatgattctgatgattagatttaacatgttgtatggttagtttttgagaattggaaattag 130041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 11304116 - 11304045
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  11304116 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 11304045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 11662034 - 11661963
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  11662034 gaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtagactaattataggttaagtt 11661963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 11768089 - 11768170
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| ||||||||||||||||||||||| | | |||||||| ||||||||||||||| || |||||||||||    
T  11768089 ttaaggtaagggtgggactaacattcaatcttcttaagcctataattctgatgattagatttaacatg-tgtaggtttagttt 11768170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 13256621 - 13256550
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||| | |||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  13256621 gaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaagttgtaggataatcataggataagtt 13256550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 16107982 - 16108053
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  16107982 gaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 16108053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 23664246 - 23664317
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||| |||||||| ||||    
T  23664246 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtt 23664317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 42374305 - 42374468
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-tta-gtttgagaattgggaattag 108  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | ||| ||| || ||||||| |||||    
T  42374305 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgatgttcttaggttggataattggg-attag 42374403  T
Q  109 gttttccattgttga-gtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatg 173  Q
    |||||  ||| ||||  ||||| | |||||||||||||||||| | ||||||||||||||||||||    
T  42374404 gtttt-gattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatg 42374468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 11524798 - 11524898
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgggaattag 108  Q
    ||||||||||||||  ||||||||||||| ||||||||||| | ||||| |  |||||||||| || |||| |||||||| |||||||||||| ||||||    
T  11524798 ttaaggtaagggtgagactaacattcaattttcttaagcttataattctaaagattagatttagcaagttgaaggtttagttttgagaattggaaattag 11524897  T
Q  109 g 109  Q
    |    
T  11524898 g 11524898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 19485973 - 19486039
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| ||||||||||||    
T  19485973 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctga-aattggatttaacatgt 19486039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 27217809 - 27217708
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaa-ttgggaatta 107  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||||  |||||||| ||||||||||    
T  27217809 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggtttagtttttgagaatttgggaatta 27217710  T
Q  108 gg 109  Q
    ||    
T  27217709 gg 27217708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 17052760 - 17052829
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||||| |||||||||||||||||||||||   | ||| |||| ||||||||||||||||    
T  17052760 attaaggtaagggtgggactaacattcaatcttcttaagccgataattttgatgattagatttaacatgt 17052829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 14274118 - 14274079
Alignment:
Q  165 gaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14274118 gaattgatgttcaggttgtagaataatcataggttaagtt 14274079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 8941317 - 8941235
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  8941317 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 8941235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 5294432 - 5294513
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  5294432 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 5294513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 457271 - 457195
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  457271 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 457195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 9032531 - 9032583
Alignment:
Q  26 actaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    ||||||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  9032531 actaacattcaattttcttaagcctatgattctgattattagatttaacatgt 9032583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 11973196 - 11973116
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  11973196 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 11973116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 15375927 - 15376003
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  15375927 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 15376003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 16411008 - 16410932
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  16411008 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 16410932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 20384337 - 20384413
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  20384337 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 20384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 23461630 - 23461714
Alignment:
Q  8 aattaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  23461630 aattaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 23461714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 24703172 - 24703096
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  24703172 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 24703096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 24705619 - 24705543
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  24705619 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 24705543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 29797479 - 29797408
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||||  |||||||||| |||| ||||||||| ||||||||||| |||| ||| ||||    
T  29797479 gaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaataaacatatgttgagtt 29797408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 29801298 - 29801227
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||||  |||||||||| |||| ||||||||| ||||||||||| |||| ||| ||||    
T  29801298 gaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaataaacatatgttgagtt 29801227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 8469385 - 8469303
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  | || ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  8469385 ttaaggtaagggtgggactaacattcaataattttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 8469303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 12754823 - 12754861
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  12754823 aattggtgttcaggttgtagaataatcataggttaagtt 12754861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 14269083 - 14269165
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  |||||||||| || |||||||||||    
T  14269083 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgctgtaggtttagttt 14269165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 25942366 - 25942328
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  25942366 aattgatgttcaggttgtagaataatcttaggttaagtt 25942328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 26355194 - 26355295
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaa-ttgggaatta 107  Q
    |||||||||||||| |||||||||||||  |||| ||  | |||||| || ||||  ||||||||||||| ||||||||  |||||||| ||||||||||    
T  26355194 taaggtaagggtgggactaacattcaataatcttgagtctatgattccgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgggaatta 26355293  T
Q  108 gg 109  Q
    ||    
T  26355294 gg 26355295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 26357646 - 26357747
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaa-ttgggaatta 107  Q
    |||||||||||||| |||||||||||||  |||| ||  | |||||| || ||||  ||||||||||||| ||||||||  |||||||| ||||||||||    
T  26357646 taaggtaagggtgggactaacattcaataatcttgagtctatgattccgaaaattgtatttaacatgttgtaggtttagtttttgagaatttgggaatta 26357745  T
Q  108 gg 109  Q
    ||    
T  26357746 gg 26357747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 45846764 - 45846846
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||| ||| ||||  ||||||||||||| |||||||||||    
T  45846764 ttaaggtaagggtgggactaacattcaataatcttgagtctctgattttgaaaattgtatttaacatgttgtaggtttagttt 45846846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 5295605 - 5295686
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  | ||||||||||| |||||||||||    
T  5295605 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtaattaacatgttgtaggtttagttt 5295686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 5296778 - 5296859
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  | ||||||||||| |||||||||||    
T  5296778 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtaattaacatgttgtaggtttagttt 5296859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 9945010 - 9945091
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  9945010 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 9945091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 10062883 - 10062947
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  10062883 taaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 10062947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 13870294 - 13870218
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||| ||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  13870294 taaggtaagggtgggactagcattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 13870218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 17016596 - 17016664
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    ||||||||||||||  |||| ||||||||  |||||||||  | |||||||| ||||||||||||||||    
T  17016596 ttaaggtaagggtgagactagcattcaattctcttaagctgataattctgatgattagatttaacatgt 17016664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 18431661 - 18431585
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| ||||| |||||||| ||||||    
T  18431661 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggattttacatgttgtaggttt 18431585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 18628514 - 18628438
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| | |||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  18628514 taaggtaagggtgggaataacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 18628438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 21188926 - 21189006
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| ||||||||| |||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  21188926 aaggtaagggtgggactaacatttaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 21189006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 41523868 - 41523792
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||     |||||||| |||| |||||||||||||| ||||||    
T  41523868 taaggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttt 41523792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 16580668 - 16580593
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    ||||||||||| | |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  16580668 aaggtaagggttggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 16580593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 708679 - 708717
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  708679 aattggtgtttaggttgtagaataatcataggttaagtt 708717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 14156392 - 14156493
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgg-gaatta 107  Q
    |||||||||||||| |||| ||||||||  |||| ||  | ||||||||| ||||  |||| |||||||| ||||||||  |||||||||||| ||||||    
T  14156392 taaggtaagggtgggactatcattcaataatcttgagtctatgattctgaaaattttatttgacatgttgtaggtttagtctttgagaattggagaatta 14156491  T
Q  108 gg 109  Q
    ||    
T  14156492 gg 14156493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 47975049 - 47975087
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  47975049 aattggtgttcaggttgtagaataatcatagattaagtt 47975087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 9176834 - 9176899
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    ||||||||||||||  |||| |||||||| || |||||  ||| ||||||||||||| ||||||||    
T  9176834 ttaaggtaagggtgagactagcattcaattttattaagtctgtaattctgataattaaatttaaca 9176899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 14317516 - 14317593
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttta 88  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||    
T  14317516 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttta 14317593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 14948333 - 14948402
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttg 80  Q
    |||||||||||||| |||||||||||||  | |||||    ||||||||| |||| ||||||||||||||    
T  14948333 taaggtaagggtgggactaacattcaataatattaagtcattgattctgaaaattggatttaacatgttg 14948402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 16233471 - 16233394
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctg-ataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    |||||||| | |||| |||||||||||||| ||||||    
T  16233471 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaaattggatttaacatgttgtaggttt 16233394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 41526327 - 41526254
Alignment:
Q  14 ggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    ||||||||||| |||||||||||||  |||||||     |||||||| |||| |||||||||||||| ||||||    
T  41526327 ggtaagggtgggactaacattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttt 41526254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 3387518 - 3387454
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||   || |||||||| |||| ||||||||    
T  3387518 taaggtaagggtgagactaacattcaatcttattaagtccgtaattctgatgattaaatttaaca 3387454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 13315239 - 13315271
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggt 198  Q
    ||||| |||||||||||||||||||||||||||    
T  13315239 aattggtgttcaggttgtagaataatcataggt 13315271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 18641220 - 18641144
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| | |||||||||||  |||||||    ||||||||| |||| ||||||| |||||| ||||||    
T  18641220 taaggtaagggtgggaataacattcaataatcttaagtcattgattctgaaaattggatttaatatgttgtaggttt 18641144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 19195088 - 19195048
Alignment:
Q  164 agaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||| | ||||| |||||||||||||||||||||||||    
T  19195088 agaattgttattcagattgtagaataatcataggttaagtt 19195048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 32126439 - 32126363
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| || ||||||||||  |||||||    ||||||| | |||| |||||||||||||| ||||||    
T  32126439 taaggtaagggtgggacaaacattcaataatcttaagtcattgattctaaaaattggatttaacatgttgtaggttt 32126363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 48274553 - 48274489
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| | |||  ||| |||||||| |||| ||||||||    
T  48274553 taaggtaagggtgagactaacattcaatcttatcaagtctgtaattctgatgattaaatttaaca 48274489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 171; Significance: 5e-92; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 22413138 - 22412944
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22413138 ttaaggtaagggtgggactaacattcaatctttttaagcctatgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 22413039  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  22413038 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgtttatgttgtagaataatcataggttaagtt 22412944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 18419503 - 18419309
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaattag 108  Q
    |||||||| ||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| ||||    
T  18419503 taaggtaaaggtgggactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgatgttcttaggttggataattggga-ttag 18419405  T
Q  109 gttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||  ||| |||| ||| || | |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18419404 gttttg-attattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtt 18419309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 27868698 - 27868769
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27868698 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 27868769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 33472687 - 33472758
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33472687 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 33472758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 23470744 - 23470643
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt---gagaattgggaatta 107  Q
    |||||||||||||| | ||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| |||||||   ||||||||| |||||    
T  23470744 taaggtaagggtgggaataacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttggagaattggaaatta 23470645  T
Q  108 gg 109  Q
    ||    
T  23470644 gg 23470643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 31062293 - 31062205
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattg 100  Q
    |||||||||||||  | ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  31062293 taaggtaagggtg--agtaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggagatttagttttgagaattg 31062205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 41875716 - 41875787
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  41875716 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaataatcataggttaagtt 41875787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 23476456 - 23476375
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||| || |||||||||||||||||| ||| |||||||    
T  23476456 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctaatgattagatttaacatgttgtagggttagttt 23476375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 25573581 - 25573677
Alignment:
Q  15 gtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattagg 109  Q
    |||||||||| ||||||||||||||||||||| | | |||||||||| |||||||||||||||||| ||| ||||  |||||||||||| |||||||    
T  25573581 gtaagggtgggactaacattcaatcttcttaatcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattggaaattagg 25573677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 25576010 - 25576105
Alignment:
Q  16 taagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattagg 109  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||| | |||||||||||||||| ||| ||||  |||||||||||| |||||||    
T  25576010 taagggtgggactaacattcaatcttcttaagcctatgattctgatgaatagatttaacatgttgtagggttagtttttgagaattggaaattagg 25576105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 40723458 - 40723529
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttg 80  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||| |||||||||||||    
T  40723458 attaaggtaagggtgggactaacattcaatcttcttaagcctatgattttgataattaaatttaacatgttg 40723529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 25574817 - 25574911
Alignment:
Q  16 taagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattag 108  Q
    ||||||||| ||||||||||||||||||||||| | || ||||||| | |||||||||||||||| ||| ||||  |||||||||||| ||||||    
T  25574817 taagggtgggactaacattcaatcttcttaagcctatggttctgatgaatagatttaacatgttgtagggttagtttttgagaattggaaattag 25574911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 41860581 - 41860655
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtt 86  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||| |||||||||||||||| |||||| |||||    
T  41860581 taaggtaagggtgggactaacattcaatcttcttaagcctatgattttgataattagatttaa-atgttgtaggtt 41860655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 41094818 - 41094921
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgg-gaatta 107  Q
    |||||||||||||  ||||||| |||||  |||||||| ||| ||||||||||||  ||||||||||||| ||||||||  |||||||||||| ||||||    
T  41094818 taaggtaagggtgagactaacaatcaattctcttaagcctgtaattctgataattgtatttaacatgttgtaggtttagtttttgagaattggagaatta 41094917  T
Q  108 ggtt 111  Q
    ||||    
T  41094918 ggtt 41094921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 9777034 - 9776963
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||||  |||| |||||||||| ||||||||| ||||||||||| |||||||||||||    
T  9777034 gaaaagtgtagaaatcatgacaattatgttaagaatcgatgttcagattgtagaataaacataggttaagtt 9776963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 40726732 - 40726666
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| ||||||||||||    
T  40726732 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctga-aattggatttaacatgt 40726666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 14049040 - 14048959
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| | ||||| |||||  |||||||| ||| ||||||||||||  ||||||||||||| |||||||||||    
T  14049040 taaggtaagggtgggattaacaatcaattctcttaagcctgtaattctgataattgtatttaacatgttgtaggtttagttt 14048959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 26739796 - 26739888
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg 101  Q
    ||||||||||||||  |||||||||||||  |||||||  ||| |||||||| |||| |||||||| |||| |||||||| ||||||||||||    
T  26739796 ttaaggtaagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaagttgtaggtttagttttgagaattgg 26739888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 37804196 - 37804267
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| ||| ||||    
T  37804196 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtt 37804267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 2153951 - 2154033
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  2153951 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 2154033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 20572813 - 20572732
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  ||||||||||||| ||  ||||| | |||||||||| ||||||||||||||| || |||||||||||    
T  20572813 ttaaggtaagggtgagactaacattcaattttggtaagcctatgattctgatgattagatttaacatg-tgtaggtttagttt 20572732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 29330816 - 29330734
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  29330816 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 29330734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 20909963 - 20909887
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  20909963 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 20909887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 23065464 - 23065388
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  23065464 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 23065388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 24594218 - 24594258
Alignment:
Q  164 agaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  24594218 agaattgatgttcaggtggtagaataatcataggttaagtt 24594258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 24668312 - 24668352
Alignment:
Q  164 agaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  24668312 agaattgatgttcaggtggtagaataatcataggttaagtt 24668352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 24738081 - 24738121
Alignment:
Q  164 agaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  24738081 agaattgatgttcaggtggtagaataatcataggttaagtt 24738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 24750850 - 24750890
Alignment:
Q  164 agaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  24750850 agaattgatgttcaggtggtagaataatcataggttaagtt 24750890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 29346929 - 29346853
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  29346929 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 29346853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 29349402 - 29349326
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  29349402 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 29349326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 29351875 - 29351799
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  29351875 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 29351799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 39246084 - 39246008
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  39246084 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 39246008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 30138244 - 30138279
Alignment:
Q  169 tgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||||||||||    
T  30138244 tgatgttcaggttgtagaataatcataggttaagtt 30138279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 17516289 - 17516367
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttta 88  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||    
T  17516289 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttta 17516367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 21504037 - 21503995
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  21504037 taagaactgatgttcaggttgtagaataatcataggttgagtt 21503995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 24473917 - 24473835
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  24473917 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 24473835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 26731989 - 26732075
Alignment:
Q  16 taagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg 101  Q
    ||||||||  |||||||||||||  |||||||  ||| |||||||| |||| |||||||| |||| |||||||| ||||||||||||    
T  26731989 taagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaagttgtaggtttagttttgagaattgg 26732075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 263982 - 264058
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  263982 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 264058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 18318184 - 18318248
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  18318184 taaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 18318248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 20917168 - 20917248
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  20917168 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 20917248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 38620384 - 38620308
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  38620384 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 38620308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 39364332 - 39364256
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||   ||||||    ||||||||| |||| |||||||||||||| ||||||    
T  39364332 taaggtaagggtgggactaacattcaataaccttaagtcattgattctgaaaattggatttaacatgttgtaggttt 39364256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 42244576 - 42244652
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| ||||||| |||||| ||||||    
T  42244576 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatatgttgtaggttt 42244652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 15797394 - 15797324
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttg 80  Q
    ||||||||||||||| |||| || ||||| ||||||||| | | ||||||||| ||  |||||||||||||    
T  15797394 ttaaggtaagggtgggactagcactcaattttcttaagcctctaattctgatagttgtatttaacatgttg 15797324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 36508901 - 36508939
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  36508901 aattggtgtttaggttgtagaataatcataggttaagtt 36508939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 22177346 - 22177411
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    ||||||||||||||  |||| ||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  22177346 ttaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaaca 22177411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 10732151 - 10732227
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  || ||||    ||||| ||| ||||||||||||||||||| ||||||    
T  10732151 taaggtaagggtgagactaacattcaataatcctaagtcattgattatgaaaattagatttaacatgttgtaggttt 10732227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 20765230 - 20765294
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  ||||| |||||||||| |||||  ||| |||||||| |||| ||||||||    
T  20765230 taaggtaagggtgagactaaaattcaatcttattaagtctgtaattctgatgattaaatttaaca 20765294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 32028866 - 32028786
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||| ||  |||||||||||||  |||| || || ||||||||| ||||  ||||||||||||| || ||||||||    
T  32028866 aaggtaaggatgagactaacattcaataatcttgagtttatgattctgaaaattgtatttaacatgttgtagttttagttt 32028786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 5e-92; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 22172978 - 22173168
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||  ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172978 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattatgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 22173077  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggtta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22173078 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggtta 22173168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 7187478 - 7187283
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattag 108  Q
    |||||||||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7187478 attaaggtaagggtgagactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttagtttgaaaattgggaattag 7187379  T
Q  109 gttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7187378 gttttccattgttgagtttgattagaaaagtgtagaaaccatgataattgtgttaagaattgatgttctggttgtagaataatcatagattaagtt 7187283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 43707136 - 43707242
Alignment:
Q  98 ttgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcatagg 197  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  43707136 ttgggaattaggttttccattgttgaatttgattagaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaagttgtagaataatcatagg 43707235  T
Q  198 ttaagtt 204  Q
    |||||||    
T  43707236 ttaagtt 43707242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 20590406 - 20590477
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20590406 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtt 20590477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 41301053 - 41301124
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41301053 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 41301124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 34137915 - 34137816
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattagg 109  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| ||||  |||||||||||| |||||||    
T  34137915 aaggtaagggtggaactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattggaaattagg 34137816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 39827194 - 39827295
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaatta 107  Q
    ||||||||||||||| ||||| ||||||||||||||||| | |||||||||| |||||||||||||||||| ||| ||||  |||||||||||| |||||    
T  39827194 ttaaggtaagggtgggactaagattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattggaaatta 39827293  T
Q  108 gg 109  Q
    ||    
T  39827294 gg 39827295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 13100858 - 13100929
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  13100858 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaataatcataggttaagtt 13100929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 21072812 - 21072883
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21072812 gaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtt 21072883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 23338523 - 23338594
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  23338523 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtt 23338594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 31346172 - 31345977
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaatta 107  Q
    ||||||||||||||  ||||||||||||||||||||||| | ||||| |||   |  ||||||||||||||  | | |||| ||| | |||||||| |||    
T  31346172 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattttgaatttgtgatttaacatgttgttgttcttaggttgtataattggga-tta 31346074  T
Q  108 ggttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||  ||| |||| ||| || | |||||||||||||||||| | |||||||||||||||||| ||||||| | |||||||| |||||||| ||||    
T  31346073 ggttttg-attattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctatagaataaacataggttgagtt 31345977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 31521139 - 31521078
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatg 151  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  31521139 tttgggaattgggaattaggttttcaattgttgagttcgattagaaaagtgtagaaaccatg 31521078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 43946518 - 43946618
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt--gagaattgggaattag 108  Q
    ||||||||||||   || |||||||||| ||||||||| | ||||||||||||||||||||||||||||| ||| |||||||  ||||||||| ||||||    
T  43946518 taaggtaagggtaagacaaacattcaattttcttaagcctatgattctgataattagatttaacatgttgtaggattagttttggagaattggaaattag 43946617  T
Q  109 g 109  Q
    |    
T  43946618 g 43946618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 24682279 - 24682197
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||||||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  24682279 ttaaggtaagggtgggactaacattcaataatcttaagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 24682197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 27845610 - 27845509
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaatta 107  Q
    ||||||||||||||  ||||||||||||| ||||||||  | | |||||||| ||||||||||||| |||| ||| ||||  |||||||||||| |||||    
T  27845610 ttaaggtaagggtgagactaacattcaattttcttaagtctataattctgatgattagatttaacaagttgtaggattagtttttgagaattggaaatta 27845511  T
Q  108 gg 109  Q
    ||    
T  27845510 gg 27845509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 26393375 - 26393283
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg 101  Q
    ||||||||||||||  |||||||||||||  |||||||  ||| |||||||| |||| |||||||| |||| |||||||| ||||||||||||    
T  26393375 ttaaggtaagggtgagactaacattcaattctcttaagtctgtaattctgatgattaaatttaacaagttgtaggtttagttttgagaattgg 26393283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 10684056 - 10684127
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| ||| ||||    
T  10684056 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtt 10684127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 20262088 - 20262017
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||| ||||  ||||||||||||||| ||||||||| ||||||||||| |||| ||| ||||    
T  20262088 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtt 20262017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 23932303 - 23932221
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  23932303 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 23932221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 32214249 - 32214331
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  32214249 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 32214331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 22106307 - 22106226
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  22106307 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 22106226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 6726888 - 6726808
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  6726888 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 6726808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 18809891 - 18809815
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  18809891 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 18809815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 22695283 - 22695207
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  22695283 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaatttgatttaacatgttgtaggttt 22695207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 23131810 - 23131734
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  23131810 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 23131734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 23134277 - 23134201
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  23134277 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 23134201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 23711227 - 23711303
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  23711227 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 23711303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 32038711 - 32038787
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  32038711 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 32038787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 34401736 - 34401812
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  34401736 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 34401812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 23706345 - 23706427
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| | |||||||||    
T  23706345 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtatgtttagttt 23706427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 23079873 - 23079930
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattag 67  Q
    ||||||||||||||| ||||||||||||| |||||||||   |||||||||| |||||    
T  23079873 ttaaggtaagggtgggactaacattcaattttcttaagccgatgattctgatgattag 23079930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 24918982 - 24918901
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||| ||||||| |||||||||||    
T  24918982 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattctatttaccatgttgtaggtttagttt 24918901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 45027220 - 45027301
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  45027220 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 45027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 24368668 - 24368588
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||| ||||||    
T  24368668 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtatagttt 24368588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 28578053 - 28577977
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||| | |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  28578053 taaggtaagggtaggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 28577977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 38968426 - 38968358
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    ||||||||||||||| |||||||||||||  |||||||  | ||||||| | |||| ||||||||||||    
T  38968426 ttaaggtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacatgt 38968358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 39683264 - 39683188
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| ||||  ||||||||||||| ||||||    
T  39683264 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattgaatttaacatgttgtaggttt 39683188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 22790369 - 22790412
Alignment:
Q  120 ttgagtttgattagaaaagtgtagaaaccatggtaattgtgtta 163  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||    
T  22790369 ttgattttgattagaaaaatgtagaaaccatggcaattgtgtta 22790412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 204
Target Start/End: Original strand, 1383818 - 1383848
Alignment:
Q  174 ttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||    
T  1383818 ttcaggttgtagaataatcataggttaagtt 1383848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 18546142 - 18546224
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||||| |||||| ||||||||  | | |||||||| |||||||||| || |||| ||| |||||||    
T  18546142 ttaaggtaagggtgagactaacgttcaattttcttaagtctataattctgatgattagatttagcaagttgtaggattagttt 18546224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 24897411 - 24897485
Alignment:
Q  13 aggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||||    
T  24897411 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttt 24897485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 24899894 - 24899968
Alignment:
Q  13 aggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||||    
T  24899894 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttt 24899968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 24902371 - 24902445
Alignment:
Q  13 aggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||||    
T  24902371 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttt 24902445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 24904848 - 24904922
Alignment:
Q  13 aggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||||    
T  24904848 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttt 24904922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 24907323 - 24907397
Alignment:
Q  13 aggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||||    
T  24907323 aggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttt 24907397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 36734610 - 36734648
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  36734610 aattggtgttcaggttgtagaataatcttaggttaagtt 36734648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 12626587 - 12626628
Alignment:
Q  163 aagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||| |||| ||| ||||    
T  12626587 aagaattgatgttcaggttgtagaataaacataagttgagtt 12626628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 204
Target Start/End: Complemental strand, 31521063 - 31521034
Alignment:
Q  175 tcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||||    
T  31521063 tcaggttgtagaataatcataggttaagtt 31521034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 9785589 - 9785521
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttg 80  Q
    ||||||||||||| |||||||||||||  |||||||    ||||||||| |||| ||||||| ||||||    
T  9785589 aaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaatatgttg 9785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 19647132 - 19647104
Alignment:
Q  162 taagaattgatgttcaggttgtagaataa 190  Q
    |||||||||||||||||||||||||||||    
T  19647132 taagaattgatgttcaggttgtagaataa 19647104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 21154136 - 21154216
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||| |||| |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  21154136 aaggtaagagtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 21154216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 23136516 - 23136440
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| ||||| |||||||  |||||||     |||||||| |||| |||||||||||||| ||||||    
T  23136516 taaggtaagggtgggactaatattcaataatcttaagtcatcgattctgaaaattggatttaacatgttgtaggttt 23136440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 24671866 - 24671786
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||| | ||||  |||||| |||||| |||||||||||    
T  24671866 aaggtaagggtgggactaacattcaataatcttgagtctatgattctaaaaattgtatttaatatgttgtaggtttagttt 24671786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 24941652 - 24941588
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  || ||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  24941652 taaggtaagggtgagacaaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 24941588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 26508805 - 26508729
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||  |||| |||||||||||||| ||||||    
T  26508805 taaggtaagggtgagactaacattcaataatcttaagtcattgattctggaaattggatttaacatgttgtaggttt 26508729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 43138328 - 43138264
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| ||| |  ||| |||||||| |||| ||||||||    
T  43138328 taaggtaagggtgagactaacattcaatcttattaggtctgtaattctgatgattaaatttaaca 43138264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 23661347 - 23661154
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattaggt 110  Q
    |||||||||||||| |||  |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23661347 taaggtaagggtgggactggcattcaatcttcataagcctatgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattaggt 23661248  T
Q  111 tttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23661247 tttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 23661154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 17460207 - 17460402
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt-gagaattgggaattag 108  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| ||| | ||||||||||||||    
T  17460207 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttagaggtttaattttgggaattgggaattag 17460306  T
Q  109 gttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17460307 gttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 17460402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 20463166 - 20463052
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20463166 tttgggaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 20463067  T
Q  190 atcataggttaagtt 204  Q
    |||||||||||||||    
T  20463066 atcataggttaagtt 20463052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 115 - 204
Target Start/End: Complemental strand, 20455933 - 20455844
Alignment:
Q  115 cattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20455933 cattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 20455844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 20460888 - 20460822
Alignment:
Q  138 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20460888 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 20460822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 20455174 - 20455109
Alignment:
Q  138 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagt 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20455174 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagt 20455109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 22245237 - 22245318
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  22245237 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttagttt 22245318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 22252315 - 22252396
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  22252315 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttagttt 22252396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 8413872 - 8413943
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8413872 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 8413943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 22385077 - 22385176
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgggaattagg 109  Q
    |||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||| | |||||||    
T  22385077 taaggtaatggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttagttttgagaatttgaaattagg 22385176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 25483441 - 25483636
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaatta 107  Q
    ||||| ||||||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | ||||| || |||    
T  25483441 ttaagttaagggtgggactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattgtga-tta 25483539  T
Q  108 ggttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
     |||||  ||| |||| ||| || | |||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25483540 tgttttg-attattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaagtt 25483636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 19882876 - 19882805
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19882876 gaaaagtgtagaaaccatcgaaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtt 19882805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 14396910 - 14397105
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaatta 107  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| |||    
T  14396910 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattggga-tta 14397008  T
Q  108 ggttttccattgttgagtttg-attagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||  ||| |||| |||  | | |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  14397009 ggttttg-attattgattttttaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtt 14397105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 20501229 - 20501298
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgtt 79  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||    
T  20501229 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgtt 20501298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 22526461 - 22526359
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaag-cttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgggaattag 108  Q
    |||||||||||||  ||||||||||||| |||||||| ||| | ||| |||| ||||||||||||| |||| |||||||| |||||||||||||||||||    
T  22526461 taaggtaagggtgagactaacattcaattttcttaagccttataattttgatgattagatttaacaagttgtaggtttagttttgagaattgggaattag 22526362  T
Q  109 gtt 111  Q
    |||    
T  22526361 gtt 22526359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 22984612 - 22984534
Alignment:
Q  13 aggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||  ||||||||||||||||||||||| | |||||||||| ||||||||||||||| || |||||||||||    
T  22984612 aggtaagggtgagactaacattcaatcttcttaagcctttgattctgatgattagatttaacatg-tgtaggtttagttt 22984534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 22184093 - 22184007
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgaga 96  Q
    ||||||||||||||  | ||||||||| | ||||||||||| | |||||||| ||||||||||||| |||| |||||||||||||||    
T  22184093 ttaaggtaagggtgagaataacattcagttttcttaagcttataattctgatgattagatttaacaagttgtaggtttagtttgaga 22184007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 28398540 - 28398459
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  ||||||||||||| ||||||||| | |||||||||| |||||| ||||||||||| ||| |||||||    
T  28398540 taaggtaagggtgagactaacattcaattttcttaagcctatgattctgatgattagaattaacatgttgtaggattagttt 28398459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 22996764 - 22996696
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    ||||||||||||||  ||||||||||||||||||||||| | ||||| |||| ||||||||||||||||    
T  22996764 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattttgatgattagatttaacatgt 22996696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 24049452 - 24049371
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||| ||||||||||||| |||||||||||    
T  24049452 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattatatttaacatgttgtaggtttagttt 24049371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 20404120 - 20404040
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||||||||  ||||||||||||| |||||||||||    
T  20404120 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgataattgtatttaacatgttgtaggtttagttt 20404040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 1326444 - 1326526
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  1326444 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 1326526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 16412634 - 16412716
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  16412634 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 16412716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 16800411 - 16800309
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagc-ttgtgattctgataattagatttaacatgttggaggtttagttt-gagaattgggaattag 108  Q
    |||||||||||||  |||| |||||||| ||||||||| || | ||||| || ||||||||||||| |||| |||| || ||| ||||||||||||||||    
T  16800411 taaggtaagggtgagactatcattcaattttcttaagccttataattctaatgattagatttaacaagttgtaggtataattttgagaattgggaattag 16800312  T
Q  109 gtt 111  Q
    |||    
T  16800311 gtt 16800309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 17085077 - 17085151
Alignment:
Q  18 agggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||| ||||||||||||||||||||||| | | ||| |||| ||||||||||||| |||| ||| |||||||    
T  17085077 agggtgggactaacattcaatcttcttaagcctttaattatgatgattagatttaacaagttgtagggttagttt 17085151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 17085311 - 17085385
Alignment:
Q  18 agggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||| ||||||||||||||||||||||| | | ||| |||| ||||||||||||| |||| ||| |||||||    
T  17085311 agggtgggactaacattcaatcttcttaagcctttaattatgatgattagatttaacaagttgtagggttagttt 17085385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 19897356 - 19897275
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  19897356 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 19897275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 32122570 - 32122489
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  32122570 taaggtaagggtggaactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 32122489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 32810536 - 32810455
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  32810536 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 32810455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 1485350 - 1485274
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  1485350 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 1485274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 4484228 - 4484152
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  4484228 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 4484152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 11775642 - 11775598
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttca 177  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  11775642 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttca 11775598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 14408658 - 14408734
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  14408658 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 14408734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 14824724 - 14824648
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  14824724 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 14824648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 18677276 - 18677352
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  18677276 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 18677352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 20045409 - 20045485
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  20045409 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 20045485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 45289760 - 45289863
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttgga-ggtttag--tttgagaa-ttgggaat 105  Q
    ||||||||||||||| |||||||||||||  |||||||  | ||||||| | |||| |||||||||||||| | |||||||  |||||||| ||||||||    
T  45289760 ttaaggtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacatgttgtagggtttagtttttgagaatttgggaat 45289859  T
Q  106 tagg 109  Q
    ||||    
T  45289860 tagg 45289863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 22920053 - 22920124
Alignment:
Q  90 tttgagaattgggaattaggttttcca-ttgttgagttt-gattagaaaagtgtagaaaccatggtaattgt 159  Q
    |||| ||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||| ||| ||||||    
T  22920053 tttgggaattgggaattaggtttttcaattgttgaattttgattagaaaagtgtagaaaccgtggcaattgt 22920124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 5852507 - 5852608
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaa-ttgggaatta 107  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| |||   ||||||||||||| ||||||||  |||||||| ||||||||||    
T  5852507 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaatcgtatttaacatgttgtaggtttagtttttgagaatttgggaatta 5852606  T
Q  108 gg 109  Q
    ||    
T  5852607 gg 5852608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 11361360 - 11361278
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||| | ||||  ||||||||||||| |||||||||||    
T  11361360 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctaaaaattgtatttaacatgttgtaggtttagttt 11361278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 22418588 - 22418654
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    ||||||||||||  |||||||||||||  |||||||||  | |||||||| ||||||||||||||||    
T  22418588 aaggtaagggtgagactaacattcaattctcttaagctgataattctgatgattagatttaacatgt 22418654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 22483678 - 22483636
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  22483678 taagaattgatgttcaggttgtagaataaacataggttgagtt 22483636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 19928758 - 19928839
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  ||||||||||| |  |||||||| | ||||||||| ||||  ||||||||||||  |||||||||||    
T  19928758 taaggtaagggtgagactaacattcattaatcttaagcctttgattctgaaaattgcatttaacatgttataggtttagttt 19928839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 20457520 - 20457439
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | |||| |||| ||||  ||||||||||||| |||||||||||    
T  20457520 taaggtaagggtgggactaacattcaataatcttgagtctatgatcctgaaaattgtatttaacatgttgtaggtttagttt 20457439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 20532534 - 20532603
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||||  |||||||||||||  | |||||||  | |||||||| ||||||||||||||||    
T  20532534 attaaggtaagggtgagactaacattcaattctattaagctgataattctgatgattagatttaacatgt 20532603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 27471737 - 27471818
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||| ||| ||||  ||||||||||||| |||||||||||    
T  27471737 taaggtaagggtgggactaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagttt 27471818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 4541584 - 4541660
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| ||||| |||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  4541584 taaggtaagggtgggactaatattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 4541660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 22002703 - 22002627
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  22002703 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 22002627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 26220622 - 26220558
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  26220622 taaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 26220558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 26222331 - 26222395
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  26222331 taaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 26222395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 25657668 - 25657710
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| |||||||||| |||||||| ||||    
T  25657668 taagaattgatgttcaggctgtagaataaacataggttgagtt 25657710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 38549132 - 38549214
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| | |||||||||||||  |||| ||  | ||||||||| ||||  |||||||||||||  ||||||||||    
T  38549132 ttaaggtaagggttggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtgggtttagttt 38549214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 15202306 - 15202387
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  15202306 taaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 15202387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 37609722 - 37609803
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  |||||||||||||  |||| ||  | ||||||| | ||||  ||||||||||||| |||||||||||    
T  37609722 taaggtaagggtgagactaacattcaataatcttgagtctatgattctaaaaattgtatttaacatgttgtaggtttagttt 37609803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 13507232 - 13507296
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||| ||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  13507232 taaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaaca 13507296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 13596764 - 13596828
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||| ||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  13596764 taaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaaca 13596828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 19936238 - 19936319
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||||  |||| ||||||||  | |||||  ||| |||||||| ||||  |||||||||||| |||||||||||    
T  19936238 attaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgatta--tttaacatgttgtaggtttagttt 19936319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 20879371 - 20879343
Alignment:
Q  162 taagaattgatgttcaggttgtagaataa 190  Q
    |||||||||||||||||||||||||||||    
T  20879371 taagaattgatgttcaggttgtagaataa 20879343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 22365606 - 22365542
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||| ||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  22365606 taaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaaca 22365542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 24354016 - 24353952
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||| ||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  24354016 taaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaaca 24353952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 24485254 - 24485330
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| ||||||||| |||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||||    
T  24485254 taaggtaagggtgggactaacatttaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttt 24485330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 9 - 204
Target Start/End: Original strand, 2026 - 2222
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt-gagaattgggaatta 107  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||| | |||||||||||||    
T  2026 attaaggtaagggtgggactaacattcaatcttcttaagcttatgattctgataattagatttaacatgttcgaggtttaattttgggaattgggaatta 2125  T
Q  108 ggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2126 ggttttccattattgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaactgatgttcaggttgtagaataatcataggttaagtt 2222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 1125 - 930
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaa-ttgggaattag 108  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||||    
T  1125 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttaattttggaaattgggaattag 1026  T
Q  109 gttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1025 gttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagagttgatgttcaggttgtagaataatcataggttaagtt 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 1126 - 933
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattaggt 110  Q
    |||||||||||||  ||||||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1126 taaggtaagggtgagactaacattcaatcttcttaagcctatgattctaataattagatttaacatgttagaggtttagtttgagaattgggaattaggt 1027  T
Q  111 tttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1026 tttcaattgttgagtttgattagaaaagtgtagaaatcatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 156; Significance: 4e-83; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 1050 - 1245
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt-gagaattgggaattag 108  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||    
T  1050 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgattattagatttaacatgttggaggtttaattttgggaattgggaattag 1149  T
Q  109 gttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1150 gttttccattgttgaatttgattagaaaagtgtagaaaccatggtaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtt 1245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 156; Significance: 4e-83; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 23123 - 23318
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt-gagaattgggaattag 108  Q
    ||||||||||||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||    
T  23123 ttaaggtaagggtgtgactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttggaggtttaattttgggaattgggaattag 23222  T
Q  109 gttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23223 gttttccattgttgagtttgattagaaaaatgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaataatcataggttaagtt 23318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 72482 - 72294
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| ||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||||||||||||      |||||||||||    
T  72482 ttaaggtaagggtgggactaacattcaatcttcttaagcctacgattctgataattaggtttaacatgttggaggtttagttt------tgggaattagg 72389  T
Q  110 ttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  72388 ttttccattgttgagtttgattagaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 72294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 83048 - 82855
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattaggt 110  Q
    |||||||||||||| | ||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  83048 taaggtaagggtgggattaacattcaatcttcttaagcctatgattctaataattagatttaacatgttggaggtttagtttgagaattcggaattaggt 82949  T
Q  111 tttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  82948 tttcaattgttgagtttgattagaaatatgtagaaaccatgataattgtgttaagaattgatgttcaagttgtagaataatcatacgttaagtt 82855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 97; Significance: 7e-48; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 163305 - 163205
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  163305 tttgggaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 163206  T
Q  190 a 190  Q
    |    
T  163205 a 163205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 95359 - 95283
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  95359 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 95283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 2176 - 2290
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  2176 tttgggaattgggaattaggttttccattgttgcgtttgattagaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtagaata 2275  T
Q  190 atcataggttaagtt 204  Q
    |||| ||||||||||    
T  2276 atcacaggttaagtt 2290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 8135 - 8021
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  8135 tttgggaattgggaattaggttttccattgttgagttcgattagaaaagtgtagaaatcatggcaattgttttaagaattgatgttcaggttgtagaata 8036  T
Q  190 atcataggttaagtt 204  Q
    |||||||||||||||    
T  8035 atcataggttaagtt 8021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 21955 - 21843
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  21955 tttgggaattgggaattaggttttccattgttgagtttgattacaaaagtgtagaaaccatggcaattgtgttaacaattgatgttcaggttgtagaata 21856  T
Q  190 atcataggttaag 202  Q
    ||||||| |||||    
T  21855 atcatagattaag 21843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 18857 - 18953
Alignment:
Q  15 gtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattagg 109  Q
    |||||||||  ||||||||||||| ||||||||  | | |||||||| ||||||||||||| |||| ||| ||||  |||||||||||| |||||||    
T  18857 gtaagggtgagactaacattcaattttcttaagtctataattctgatgattagatttaacaagttgtaggattagtttttgagaattggaaattagg 18953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 87; Significance: 7e-42; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 174189 - 174303
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 189  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  174189 tttgggaattgggaattaggttttccattgttgagttcaattagaaaagtgtagaaaccatgacaattgtgttaagaattgatggtcaggttgtagaata 174288  T
Q  190 atcataggttaagtt 204  Q
    |||||| ||||||||    
T  174289 atcatatgttaagtt 174303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 118754 - 118845
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg 101  Q
    ||||||||||||||| |||||| ||||||  |||| ||  ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  118754 ttaaggtaagggtgggactaaccttcaataatcttgagtatgtgaatctga-aattagatttaacatgttggaggtttagttttgagaattgg 118845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 185110 - 185030
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  185110 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 185030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 9027 - 8948
Alignment:
Q  125 tttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9027 tttgattagaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttaagtt 8948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 75023 - 75124
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgggaatta 107  Q
    |||||||||||||||| ||||||||||||||||||||||| | | ||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  75023 attaaggtaagggtgggactaacattcaatcttcttaagcatattattcttataattagatttaacatgttgtaggtttagttttgagaatttggaatta 75122  T
Q  108 gg 109  Q
    ||    
T  75123 gg 75124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 191798 - 191879
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  191798 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttagttt 191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 64; Significance: 3e-28; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 10023 - 9952
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10023 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 9952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 36598 - 36680
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||| |||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  36598 ttaaggtaagtgtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 36680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 64; Significance: 3e-28; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 39936 - 40007
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39936 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 40007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 18647 - 18451
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaatt 106  Q
    |||||||||||||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| ||    
T  18647 attaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattggga-tt 18549  T
Q  107 aggttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||  ||| |||| ||| || | |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  18548 aggttttg-attattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtt 18451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 63; Significance: 1e-27; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 447466 - 447365
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaatta 107  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| ||||  |||||||||||| |||||    
T  447466 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattggaaatta 447367  T
Q  108 gg 109  Q
    ||    
T  447366 gg 447365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 169368 - 169297
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  169368 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtt 169297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 176721 - 176650
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  176721 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtt 176650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 498375 - 498275
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattag 108  Q
    |||||||| ||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| ||||  |||||||||||| ||||||    
T  498375 taaggtaatggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgttgtagggttagtttttgagaattggaaattag 498276  T
Q  109 g 109  Q
    |    
T  498275 g 498275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 501906 - 501825
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||| |||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  501906 taaggtaagtgtggtactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 501825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 28695 - 28795
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgggaattag 108  Q
    ||||||||||||||| ||||||||||||||||||||||| | | |||||||| ||||||||||||| |||| |||||||| |||||||||||| ||||||    
T  28695 ttaaggtaagggtgggactaacattcaatcttcttaagcctttaattctgatgattagatttaacaagttgtaggtttagttttgagaattggaaattag 28794  T
Q  109 g 109  Q
    |    
T  28795 g 28795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 7260 - 7179
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttg 93  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||||||| |||| ||||||||||||| ||||||||||||    
T  7260 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattatatttaacatgttgtaggtttagtttg 7179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 1609 - 1528
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||| || ||||| ||||||||||||| ||||||||| | |||||||||| |||||||||||||||||| |||||||||||    
T  1609 taaggcaaaggtgggactaacattcaatattcttaagcctatgattctgatgattagatttaacatgttgtaggtttagttt 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 1068 - 997
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  1068 gaaaagtgtagaaaccatagaaattgtgttaagagttgatgttcaggttgtaggataatcataggttaagtt 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 2053 - 1982
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  2053 gaaaagtgtagaaactatgctaattgtgttaagaattgatgtttaggttgtagaataatcgtaggttaagtt 1982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 260 - 159
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaatta 107  Q
    ||||||||||||||  ||||||||||||||||||||||| | | |||||||| |||||||||||||||||| ||| ||||  |||||||||||| |||||    
T  260 ttaaggtaagggtgcgactaacattcaatcttcttaagcctttaattctgatgattagatttaacatgttgtagggttagtttttgagaattggaaatta 161  T
Q  108 gg 109  Q
    ||    
T  160 gg 159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 55; Significance: 8e-23; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 160278 - 160368
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagt-ttgagaattg 100  Q
    ||||||||||||   ||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  160278 taaggtaagggtaagactaacattcactcttcttaagcctatgattctgataattagatttaacatgttggagatttagtcttgagaattg 160368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 163557 - 163646
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattg 100  Q
    |||||||| ||||  ||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||||| ||||| |||||||||||    
T  163557 taaggtaacggtgagactaacattcaatcttcttaagcctatgattctgataattaaatttaa-atgttggagatttagttttgagaattg 163646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 17335 - 17416
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||| ||| ||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||| |||||||||||    
T  17335 taaggtaaggttgggactaacattcagtcttcttaagcatatgattctgataattagatttaacattttgtaggtttagttt 17416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 42724 - 42529
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaatta 107  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| |||    
T  42724 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattggga-tta 42626  T
Q  108 ggttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||  ||| |||| ||| || | |||||||||||||||||| | ||| |||||||||||||| ||||||| |||||||||| | |||||| ||||    
T  42625 ggttttg-attattgatttttgaattgaaaagtgtagaaaccattgaaatagtgttaagaattgaagttcaggctgtagaataaacctaggttgagtt 42529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 40216 - 40285
Alignment:
Q  8 aattaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    ||||||||||||||||| ||||||||||||||||||||||| | ||||| ||| |||| ||||||||||||    
T  40216 aattaaggtaagggtgggactaacattcaatcttcttaagcctatgattttga-aattggatttaacatgt 40285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 13551 - 13652
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtttgagaattgggaattagg 109  Q
    ||||||||||||||| |||||||||||||||||||||||   | |||||||| |||||| |||||| |||| ||||||||||||  |||||| |||||||    
T  13551 ttaaggtaagggtgggactaacattcaatcttcttaagccgttaattctgatgattagacttaacaagttgtaggtttagtttggaaattggaaattagg 13650  T
Q  110 tt 111  Q
    ||    
T  13651 tt 13652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 54; Significance: 3e-22; HSPs: 4)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 23168 - 23070
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattag 108  Q
    |||||||||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||| ||||  |||||||||| ||||||||    
T  23168 taaggtaagggtgg-actaacattcaatcttcttaatcctatgattctgataattagatttaacatgttgtagg-ttagtttttgagaatttggaattag 23071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 14307 - 14214
Alignment:
Q  16 taagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattag 108  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||| |||||| ||| ||||  |||||||||| ||||||||    
T  14307 taagggtgggactaacattcaatcttcttaagcctatgattctgataattagatttaatatgttgtagg-ttagtttttgagaatttggaattag 14214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 20687 - 20605
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  20687 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 20605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 13033 - 13109
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  13033 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 13109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 10387 - 10287
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaa-ttgggaattag 108  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||||||  ||||| |||||||  ||||||| |||||||| |||||||||||    
T  10387 taaggtaagggtgggactaacattcaatcttcttaagcctatgattctgataattgcatttagcatgttgttggtttagttttgagaatttgggaattag 10288  T
Q  109 g 109  Q
    |    
T  10287 g 10287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 31651 - 31735
Alignment:
Q  26 actaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttta-gtttgagaattgggaattagg 109  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||  |||||||||| | |||||||    
T  31651 actaacattcaatcttcttaagcctatgattctgataattagatttaacatgttgtaggtttatttttgagaatttgaaattagg 31735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 220333 - 220400
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatg 77  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  220333 ttaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg 220400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 37281 - 37363
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||||  ||||||||||||||||||||||| | |||||||||| ||||||||||||||| || |||||||||||    
T  37281 attaaggtaagggtgagactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg-tgtaggtttagttt 37363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 9854 - 9773
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  ||||||||||||||||||||||| | |||||||||| ||||||||||||||| || |||||||||||    
T  9854 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattctgatgattagatttaacatg-tgtaggtttagttt 9773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 4591 - 4491
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgggaatta 107  Q
    ||||||||||||||   ||||||||||||| ||||||||||| | |||||||| ||||||||||||| |||| |||||| | |||||||||||| |||||    
T  4591 attaaggtaagggtcagactaacattcaattttcttaagcttataattctgatgattagatttaacaagttgtaggttttgttttgagaattggaaatta 4492  T
Q  108 g 108  Q
    |    
T  4491 g 4491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 7134 - 7205
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||| |||||||||| |||||||| ||||    
T  7134 gaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggctgtagaataaacataggttgagtt 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 3892 - 3821
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||||||| |||||| |||||||| ||||    
T  3892 gaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggttgttgaataaacataggttgagtt 3821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 204
Target Start/End: Original strand, 19301 - 19494
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaattagg 109  Q
    ||||||||||||  ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||||| ||| |    
T  19301 aaggtaagggtgagactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattggga-ttaag 19399  T
Q  110 ttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||  ||| |||| ||| || | |||||||||||||||||| | |||||||||||||||||| ||||||| |||||||||| |||| ||| ||||    
T  19400 ttttg-attattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataagttgagtt 19494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 9159 - 9058
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttta--gtttgagaa-ttgggaatta 107  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||| ||||||  ||||| ||||||| |||||||   |||||||| ||||||||||    
T  9159 taaggtaagggtgggactaacattcaatcttcttaagcgtatgattctaataattccatttagcatgttgtaggtttaatttttgagaatttgggaatta 9060  T
Q  108 gg 109  Q
    ||    
T  9059 gg 9058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 581 - 481
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaattag 108  Q
    |||||||||||||  ||||||||||||||||||| | | | ||||| |||| |||||||||||||||||| ||| ||||  |||||||||||| ||||||    
T  581 taaggtaagggtgagactaacattcaatcttcttcaacctttgattatgatcattagatttaacatgttgtagggttagtttttgagaattggaaattag 482  T
Q  109 g 109  Q
    |    
T  481 g 481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 26064 - 26136
Alignment:
Q  90 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgtta 163  Q
    |||| |||||||||||||||||| | |||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  26064 tttgggaattgggaattaggtttac-attgttgattttgattagaaaaatgtagaaaccatggcaattgtgtta 26136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 4082 - 4013
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttg 80  Q
    |||||||||||||  ||||||||| ||||||||||||| | ||||| |||||||||||||||||||||||    
T  4082 taaggtaagggtgagactaacatttaatcttcttaagcctatgattatgataattagatttaacatgttg 4013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 101
Target Start/End: Original strand, 203540 - 203632
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagc-ttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattgg 101  Q
    |||||||||||||  ||||||||||||||||||||||| || | ||||||||  |||||||||||| |||| |||||||| ||||||||||||    
T  203540 taaggtaagggtgagactaacattcaatcttcttaagctttataattctgatggttagatttaacaagttgtaggtttagttttgagaattgg 203632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 35 - 117
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  ||||||||||| ||||  ||||||||||||| |||||||||||    
T  35 ttaaggtaagggtgggactaacattcaataatcttgagtctgtgattctgaaaattgtatttaacatgttgtaggtttagttt 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 32195 - 32001
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggt-ttagtttg-agaattgggaatta 107  Q
    ||||||||||||||  ||||||||||||||||||||||| | |||||||||   |  ||||||||||||||  | | |||| ||| | |||||  | |||    
T  32195 ttaaggtaagggtgagactaacattcaatcttcttaagcctatgattctgaatttgtgatttaacatgttgttgttcttaggttggataattgtta-tta 32097  T
Q  108 ggttttccattgttgagttt-gattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||  ||| |||| ||| || | |||||||||||||||||| | ||||||||||||| |||| ||||||| |||||||||| |||||||| ||||    
T  32096 ggttttg-attattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagagttgaagttcaggctgtagaataa-cataggttgagtt 32001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 19221 - 19145
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| ||||||||||||||||||| ||||||    
T  19221 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattagatttaacatgttgtaggttt 19145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 21699 - 21623
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  21699 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 21623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 2697 - 2606
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag-tttgagaattg 100  Q
    ||||||||||||||  ||||||||||||||||||||||  | | |||||||| ||||||||||||| || | | |||||| |||||||||||    
T  2697 ttaaggtaagggtgagactaacattcaatcttcttaagtctataattctgatgattagatttaacaagtcgtaagtttagttttgagaattg 2606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 333289 - 333188
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag---tttgagaattgggaatta 107  Q
    |||||||||||||  ||||||||||||| ||||||||  | | |||||||| ||||||||||||| |||| ||| ||||   |||||||||||| |||||    
T  333289 taaggtaagggtgagactaacattcaattttcttaagtctataattctgatgattagatttaacaagttgtaggattagttttttgagaattggaaatta 333190  T
Q  108 gg 109  Q
    ||    
T  333189 gg 333188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 66237 - 66269
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggt 198  Q
    ||||| |||||||||||||||||||||||||||    
T  66237 aattggtgttcaggttgtagaataatcataggt 66269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 6896 - 6978
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  6896 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 6978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 18780 - 18698
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  18780 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 18698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 34339 - 34257
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  34339 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 34257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 21434 - 21396
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  21434 aattggtgttcaggttgtagaataatcatagtttaagtt 21396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 10789 - 10723
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatg 77  Q
    |||||||||||||| |||||||||||||||||||||||   | |||||||| |||| ||||||||||    
T  10789 taaggtaagggtgggactaacattcaatcttcttaagccgttaattctgatgattaaatttaacatg 10723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 8221 - 8145
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  8221 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 8145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 54811 - 54912
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaattgggaatta 107  Q
    |||||||||| |||| ||||||||||||||||||||  | | | ||| |||| ||||||||||||| |||| ||| ||||  |||||||||||| |||||    
T  54811 ttaaggtaagagtgggactaacattcaatcttcttatacctttaattatgatgattagatttaacaagttgtagggttagtttttgagaattggaaatta 54910  T
Q  108 gg 109  Q
    ||    
T  54911 gg 54912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 22020 - 21978
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  22020 taagaattggtgttcaggttgtagaataatcataggttaagtt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 7293 - 7212
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  7293 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 7212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 23842 - 23887
Alignment:
Q  133 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcag 178  Q
    |||||||||||||||||| | |||||||||||||||||||||||||    
T  23842 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcag 23887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 8774 - 8693
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||| ||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  8774 taagttaagggtggaactaacattcaataatcttgagtgtatgattctgaaaattgtatttaacatgttgtaggtttagttt 8693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 107317 - 107236
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  107317 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 115818 - 115737
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  115818 taaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 115737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 78 - 2
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  78 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 12139 - 12103
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggt 198  Q
    |||||||||||||||||||||||||||||||||||||    
T  12139 taagaattgatgttcaggttgtagaataatcataggt 12103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 14898 - 14822
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  14898 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 14822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 22699 - 22781
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||| |||||    
T  22699 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttgagttt 22781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 20527 - 20605
Alignment:
Q  14 ggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||| |||||    
T  20527 ggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttcagttt 20605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 6948 - 6976
Alignment:
Q  162 taagaattgatgttcaggttgtagaataa 190  Q
    |||||||||||||||||||||||||||||    
T  6948 taagaattgatgttcaggttgtagaataa 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 38770 - 38694
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  38770 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 38694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 38952 - 39028
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  38952 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 39028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 41348 - 41272
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  41348 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 41272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 12238 - 12162
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  12238 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 12162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 158733 - 158657
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  158733 taaggtaagggtgggactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 158657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 22015 - 21933
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||||||||||||  |||| ||  | ||||| ||| ||||  ||||||||||||| |||||||||||    
T  22015 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattgtgaaaattgtatttaacatgttgtaggtttagttt 21933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 1201 - 1119
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| ||||| |||||    
T  1201 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggttgagttt 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 5537 - 5455
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| | |||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  5537 ttaaggtaagggtgggaataacattcaataatcttgagtctatgattctgaaaattgtatttaacatgttgtaggtttagttt 5455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 7987 - 7909
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    ||||| |||||||||| |||||||||||||  |||||||  | ||||||| | |||| |||||||||||||| ||||||    
T  7987 attaaagtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacatgttgtaggttt 7909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 7627 - 7545
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||||||| |||||||||||    
T  7627 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgagaattgtatttaacatgttgtaggtttagttt 7545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 3663 - 3581
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||||||| ||||  |||||| |||||| |||||||||||    
T  3663 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattctgaaaattgtatttaatatgttgtaggtttagttt 3581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 35390 - 35348
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||| |||||||| ||||    
T  35390 taagaattgatgttcaggttgtagaataaacataggttgagtt 35348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 5320 - 5398
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    ||||| |||||||||| |||||||||||||  |||||||  | ||||||| | |||| |||||||||||||| ||||||    
T  5320 attaaagtaagggtgggactaacattcaataatcttaagtctatgattctaaaaattggatttaacatgttgtaggttt 5398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 17 - 95
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||||  ||||| |||||||  |||||||  | ||||||| | |||| |||||||||||||| ||||||    
T  17 attaaggtaagggtgagactaatattcaataatcttaagtctatgattctaaaaattggatttaacatgttgtaggttt 95  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 1551 - 1470
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagtt 91  Q
    ||||||||||||||| |||||||||||||  |||| ||  | ||||| ||| ||||  ||||||||||||| ||||||||||    
T  1551 ttaaggtaagggtgggactaacattcaataatcttgagtctatgattttgaaaattgtatttaacatgttgtaggtttagtt 1470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 531 - 455
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  531 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 14342 - 14266
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  |||||||    ||||||| | |||| |||||||||||||| ||||||    
T  14342 taaggtaagggtgggactaacattcaataatcttaagtcattgattctcaaaattggatttaacatgttgtaggttt 14266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 10194 - 10118
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||||||| |||| |||||||||||||| ||||||    
T  10194 taaggtaagggtgagactaacattcaataatcttaagtcattgattctgaaaattggatttaacatgttgtaggttt 10118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 16385 - 16282
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttag--tttgagaa-ttgggaatta 107  Q
    |||||||||||||| ||||||||||| |  |||||||  | | ||||||| ||||   |||||||||||| ||||||||  |||||||| ||||||||||    
T  16385 taaggtaagggtgggactaacattcattaatcttaagtctattattctgaaaattgcctttaacatgttgtaggtttagtttttgagaatttgggaatta 16286  T
Q  108 ggtt 111  Q
    ||||    
T  16285 ggtt 16282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 26050 - 25986
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||| ||||||||||| |||||| ||| |||||||| |||| ||||||||    
T  26050 taaggtaagggtgagactagcattcaatcttattaagcctgtaattctgatgattaaatttaaca 25986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 476 - 540
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  || |||||||||||||||||||| | ||||||||| ||||  ||||||||    
T  476 taaggtaagggtgagacgaacattcaatcttcttaagcctatgattctgaaaattgtatttaaca 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 4003 - 4071
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    ||||||||||||||  |||||||||||||  |||||||||  ||||||||||  ||| |||||||||||    
T  4003 ttaaggtaagggtgagactaacattcaattctcttaagctgatgattctgatggttatatttaacatgt 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 72630 - 72566
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  |||||||||||||||| |||||  ||| |||||||| |||| ||||||||    
T  72630 taaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaaca 72566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 1009 - 928
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||| ||| |||| |||||||| ||||||||  | | ||| |||| ||||||||||||||| || |||||||||||    
T  1009 ttaaggtaaggctgggactagcattcaattttcttaagtctataattatgatgattagatttaacatg-tgtaggtttagttt 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 2097 - 2015
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||||||||||||  |||||||  | ||||||||| ||||  |||||| |||||  |||||||||||    
T  2097 ttaaggtaagggtgagactaacattcaataatcttaagtctatgattctgaaaattgtatttaatatgttataggtttagttt 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 8951 - 8993
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||||||| | |||||| ||||    
T  8951 taagaattgatgttcaggttgtagaataaacttaggttgagtt 8993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 5774 - 5812
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  5774 aattgatgttcaggttgtagaataaacataggttgagtt 5812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 23040 - 22962
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttc-ttaagcttgtgattctgataattagatttaacatgttggaggtt 86  Q
    |||||||||||||||| |||||||||||||  || |||||  | ||||||| | |||| |||||||||||||| |||||    
T  23040 attaaggtaagggtgggactaacattcaataatctttaagtctatgattctaaaaattggatttaacatgttgtaggtt 22962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 14740 - 14782
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||| |||||||||||||||||| |||||||| ||||    
T  14740 taagaattgaagttcaggttgtagaataaacataggttgagtt 14782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 23798 - 23840
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||| |||||||||||||||||| |||||||| ||||    
T  23798 taagaattgaagttcaggttgtagaataaacataggttgagtt 23840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 21931 - 21973
Alignment:
Q  162 taagaattgatgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||||||||||||||| |||||||||| |||||||| ||||    
T  21931 taagaattgatgttcaggctgtagaataaacataggttgagtt 21973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 16085 - 16166
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  ||||||||||||| ||||||||  | | |||| ||| |||||||||| || |||| ||| |||||||    
T  16085 taaggtaagggtgagactaacattcaattttcttaagtctataattcggatgattagatttagcaagttgtaggattagttt 16166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 25272 - 25353
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||  ||||||||||||| ||||||||    | |||||||| |||||||||| || |||| ||| |||||||    
T  25272 taaggtaagggtgagactaacattcaattttcttaagtcgataattctgatgattagatttagcaagttgtaggattagttt 25353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 10827 - 10745
Alignment:
Q  10 ttaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||||  |||||||||||||  |||| ||  | ||||||||| ||||  ||||||||| ||| |||||||||||    
T  10827 ttaaggtaagggtgagactaacattcaataatcttgagtctatgattctgaaaattgtatttaacatattgtaggtttagttt 10745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 1604 - 1673
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgt 78  Q
    |||||||||||||||  ||||||||||||   |||||||||  | ||| |||| ||||||||||||||||    
T  1604 attaaggtaagggtgagactaacattcaactctcttaagctgataattatgatgattagatttaacatgt 1673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 58787 - 58707
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    |||||||||||||||  ||||||||||||| || |||||  | ||||||||   ||||||||||||| |||| ||| |||||||    
T  58787 attaaggtaagggtgagactaacattcaattttattaagtctatgattctg---attagatttaacaagttgaaggattagttt 58707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 6893 - 6817
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    | ||||||| |||| |||||||||||||| ||||||    
T  6893 taaggtaagggtgagactaacattcaataatcttaagtcattaattctgaaaattggatttaacatgttgtaggttt 6817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 2134 - 2102
Alignment:
Q  166 aattgatgttcaggttgtagaataatcataggt 198  Q
    ||||| |||||||||||||||||||||||||||    
T  2134 aattggtgttcaggttgtagaataatcataggt 2102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 2005 - 2037
Alignment:
Q  172 tgttcaggttgtagaataatcataggttaagtt 204  Q
    |||||| ||||||||||||||||||||||||||    
T  2005 tgttcatgttgtagaataatcataggttaagtt 2037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 17363 - 17415
Alignment:
Q  9 attaaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgat 61  Q
    |||||||||||||||  |||||||||||||||| |||||  ||| ||||||||    
T  17363 attaaggtaagggtgagactaacattcaatcttattaagtctgtaattctgat 17415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 33837 - 33913
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||  |||||||||||||  |||||||    ||||| ||| |||| |||||||||||||| ||||||    
T  33837 taaggtaagggtgagactaacattcaataatcttaagtcattgattttgaaaattggatttaacatgttgtaggttt 33913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 60777 - 60697
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | || |||||| ||||  |||||| |||||| |||||||||||    
T  60777 aaggtaagggtgggactaacattcaataatcttgagtctatgtttctgaaaattttatttaatatgttgtaggtttagttt 60697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 43169 - 43249
Alignment:
Q  12 aaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggtttagttt 92  Q
    ||||||||||||| |||||||||||||  |||| ||  | |||||||||  |||  | ||||||||||| |||||||||||    
T  43169 aaggtaagggtgggactaacattcaataatcttgagtctatgattctgaatattgtacttaacatgttgtaggtttagttt 43249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 56220 - 56296
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  ||||  |  | ||||||||| ||||  ||||||||||||| ||||||    
T  56220 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttt 56296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 135161 - 135085
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  ||||  |  | ||||||||| ||||  ||||||||||||| ||||||    
T  135161 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttt 135085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 137630 - 137554
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  ||||  |  | ||||||||| ||||  ||||||||||||| ||||||    
T  137630 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttt 137554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 140099 - 140023
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  ||||  |  | ||||||||| ||||  ||||||||||||| ||||||    
T  140099 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttt 140023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 142568 - 142492
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  ||||  |  | ||||||||| ||||  ||||||||||||| ||||||    
T  142568 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttt 142492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 145037 - 144961
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaacatgttggaggttt 87  Q
    |||||||||||||| |||||||||||||  ||||  |  | ||||||||| ||||  ||||||||||||| ||||||    
T  145037 taaggtaagggtgggactaacattcaataatcttgggtctatgattctgaaaattgtatttaacatgttgtaggttt 144961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 128098 - 128162
Alignment:
Q  11 taaggtaagggtggcactaacattcaatcttcttaagcttgtgattctgataattagatttaaca 75  Q
    |||||||||||||  | || ||||||||||| ||||| |||| |||||||| |||| ||||||||    
T  128098 taaggtaagggtgagattagcattcaatcttattaagtttgtaattctgatgattaaatttaaca 128162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University