View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11901_high_65 (Length: 217)
Name: NF11901_high_65
Description: NF11901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11901_high_65 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 24850092 - 24850276
Alignment:
| Q |
9 |
agaagcaaaggaacatgctaccttgcagatcctctnnnnnnncatgctaccttgatctgatacaacatagtaactgatctaagtaaatttatttgtcaaa |
108 |
Q |
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|||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24850092 |
agaaccaaaggaacatgctaccttgcagatcctctaaaaaaacatgctaccttgatctgatacaacatagtaactgatctaagtaaatttatttgtcaaa |
24850191 |
T |
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| Q |
109 |
attcaaaaattagtagaaacacagctgattctggagtggtattttattcgattggtaacttgactaatatccaacctccaaactt |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
24850192 |
attcaaaaattagtagaaacacagctgattctggagtggtattttattcgattggtaacttgactaatgtccaacctccaaactt |
24850276 |
T |
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