View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11901_low_36 (Length: 303)

Name: NF11901_low_36
Description: NF11901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11901_low_36
NF11901_low_36
[»] chr1 (33 HSPs)
chr1 (62-176)||(48730435-48730549)
chr1 (61-160)||(18927862-18927961)
chr1 (66-297)||(22674145-22674382)
chr1 (62-173)||(26699362-26699472)
chr1 (62-140)||(18079504-18079582)
chr1 (62-132)||(24510055-24510125)
chr1 (62-160)||(33234632-33234730)
chr1 (62-173)||(41738867-41738979)
chr1 (62-160)||(12322690-12322788)
chr1 (62-160)||(16060680-16060778)
chr1 (62-160)||(24977864-24977962)
chr1 (82-173)||(10631365-10631457)
chr1 (62-173)||(19198766-19198878)
chr1 (64-132)||(26324766-26324834)
chr1 (62-126)||(39747592-39747656)
chr1 (62-126)||(49923644-49923708)
chr1 (188-243)||(22953498-22953553)
chr1 (66-160)||(4789393-4789487)
chr1 (62-132)||(8364793-8364863)
chr1 (62-160)||(10887318-10887416)
chr1 (62-160)||(17129901-17129999)
chr1 (197-247)||(18899838-18899888)
chr1 (2-40)||(22674526-22674564)
chr1 (62-140)||(28507220-28507298)
chr1 (197-243)||(34002891-34002937)
chr1 (87-160)||(19720916-19720989)
chr1 (199-248)||(33067346-33067395)
chr1 (87-160)||(51986418-51986491)
chr1 (198-246)||(4360296-4360343)
chr1 (62-126)||(15466251-15466315)
chr1 (197-249)||(34808194-34808246)
chr1 (62-126)||(39025168-39025232)
chr1 (197-249)||(41358614-41358666)
[»] chr2 (36 HSPs)
chr2 (62-160)||(3832356-3832454)
chr2 (62-160)||(34317883-34317981)
chr2 (62-160)||(38231516-38231614)
chr2 (62-160)||(44559226-44559324)
chr2 (63-160)||(35155377-35155474)
chr2 (62-140)||(1295364-1295442)
chr2 (77-163)||(4042722-4042808)
chr2 (197-247)||(19831507-19831557)
chr2 (62-160)||(23732146-23732244)
chr2 (62-160)||(31909296-31909394)
chr2 (62-172)||(34963978-34964088)
chr2 (71-125)||(5164322-5164376)
chr2 (62-160)||(10671715-10671813)
chr2 (62-160)||(13215242-13215340)
chr2 (62-160)||(37910937-37911035)
chr2 (190-247)||(5006606-5006663)
chr2 (62-159)||(20939142-20939239)
chr2 (197-250)||(29865462-29865515)
chr2 (197-249)||(3832588-3832640)
chr2 (65-125)||(7121071-7121131)
chr2 (62-126)||(16523108-16523172)
chr2 (197-244)||(23990147-23990194)
chr2 (77-160)||(40125051-40125134)
chr2 (62-160)||(4423980-4424078)
chr2 (62-160)||(11788138-11788235)
chr2 (215-249)||(14392785-14392819)
chr2 (197-243)||(37228993-37229039)
chr2 (197-243)||(41693677-41693723)
chr2 (62-160)||(42695953-42696051)
chr2 (62-160)||(43672017-43672115)
chr2 (197-249)||(10671892-10671944)
chr2 (197-249)||(11788367-11788419)
chr2 (215-247)||(25954395-25954427)
chr2 (197-249)||(26707870-26707922)
chr2 (62-126)||(27109161-27109225)
chr2 (88-132)||(29182281-29182325)
[»] chr4 (43 HSPs)
chr4 (77-173)||(43200042-43200138)
chr4 (62-160)||(5203110-5203208)
chr4 (62-158)||(31182212-31182307)
chr4 (62-126)||(46292451-46292515)
chr4 (62-157)||(42823908-42824003)
chr4 (62-160)||(7642470-7642568)
chr4 (62-160)||(20292135-20292233)
chr4 (62-160)||(5797637-5797735)
chr4 (62-160)||(13530464-13530562)
chr4 (62-160)||(14488004-14488102)
chr4 (82-160)||(23245316-23245394)
chr4 (62-160)||(25424129-25424227)
chr4 (197-243)||(30564836-30564882)
chr4 (197-247)||(50753921-50753971)
chr4 (62-160)||(52543546-52543644)
chr4 (105-173)||(12152353-12152422)
chr4 (67-160)||(51738293-51738386)
chr4 (197-249)||(22584284-22584336)
chr4 (62-126)||(46115596-46115660)
chr4 (62-126)||(46128730-46128794)
chr4 (197-249)||(53716918-53716970)
chr4 (77-160)||(6353470-6353553)
chr4 (68-163)||(9836905-9837000)
chr4 (62-132)||(14791683-14791753)
chr4 (82-160)||(19321655-19321733)
chr4 (62-160)||(19903346-19903444)
chr4 (62-160)||(24774244-24774342)
chr4 (82-160)||(26412421-26412499)
chr4 (197-243)||(28809014-28809060)
chr4 (62-160)||(31812008-31812106)
chr4 (82-160)||(42848228-42848306)
chr4 (197-243)||(43368468-43368514)
chr4 (197-243)||(52442043-52442089)
chr4 (62-159)||(5827741-5827838)
chr4 (62-135)||(35119373-35119446)
chr4 (63-160)||(51763020-51763117)
chr4 (62-126)||(4211620-4211684)
chr4 (197-249)||(9289263-9289315)
chr4 (64-160)||(11692846-11692942)
chr4 (88-160)||(13631442-13631514)
chr4 (64-132)||(25358388-25358456)
chr4 (62-126)||(36050405-36050469)
chr4 (197-249)||(51545920-51545972)
[»] chr5 (38 HSPs)
chr5 (53-160)||(5103818-5103925)
chr5 (62-160)||(12145060-12145158)
chr5 (65-176)||(15916354-15916465)
chr5 (62-140)||(28213478-28213556)
chr5 (62-160)||(26071375-26071473)
chr5 (62-160)||(40038580-40038678)
chr5 (65-173)||(10830600-10830709)
chr5 (62-126)||(2636788-2636852)
chr5 (197-249)||(24781986-24782038)
chr5 (62-126)||(42596572-42596636)
chr5 (77-160)||(45335-45418)
chr5 (197-248)||(10744005-10744056)
chr5 (197-248)||(14318043-14318094)
chr5 (82-173)||(19685088-19685179)
chr5 (62-157)||(20661036-20661131)
chr5 (197-243)||(9179596-9179642)
chr5 (197-247)||(9532486-9532536)
chr5 (197-243)||(15635379-15635425)
chr5 (62-132)||(17070648-17070718)
chr5 (82-160)||(18258248-18258326)
chr5 (198-248)||(18286426-18286476)
chr5 (197-243)||(22551270-22551316)
chr5 (62-160)||(29855692-29855790)
chr5 (62-160)||(36973438-36973536)
chr5 (82-160)||(37271543-37271621)
chr5 (197-243)||(38496733-38496779)
chr5 (62-160)||(40764500-40764597)
chr5 (87-160)||(6912583-6912656)
chr5 (77-126)||(35609392-35609441)
chr5 (62-163)||(42553726-42553827)
chr5 (198-246)||(45456-45504)
chr5 (62-173)||(4736359-4736471)
chr5 (62-173)||(9588429-9588541)
chr5 (197-249)||(23381947-23381999)
chr5 (62-126)||(31602266-31602330)
chr5 (62-126)||(32108926-32108990)
chr5 (62-126)||(32888799-32888863)
chr5 (197-249)||(36577719-36577771)
[»] scaffold0119 (1 HSPs)
scaffold0119 (62-160)||(16808-16906)
[»] chr7 (32 HSPs)
chr7 (62-160)||(39438846-39438944)
chr7 (62-160)||(48852529-48852627)
chr7 (62-159)||(24717254-24717351)
chr7 (49-173)||(38186565-38186690)
chr7 (62-160)||(37527239-37527337)
chr7 (62-132)||(46829127-46829197)
chr7 (62-159)||(22540110-22540207)
chr7 (62-173)||(38486610-38486722)
chr7 (197-249)||(45671499-45671551)
chr7 (61-160)||(28529085-28529184)
chr7 (62-160)||(9659440-9659538)
chr7 (62-160)||(30223546-30223644)
chr7 (62-160)||(35665960-35666058)
chr7 (62-160)||(41053993-41054091)
chr7 (62-132)||(46759790-46759860)
chr7 (63-160)||(5354936-5355033)
chr7 (62-159)||(35838010-35838107)
chr7 (62-126)||(6589080-6589144)
chr7 (77-160)||(27458484-27458567)
chr7 (197-243)||(1974012-1974058)
chr7 (62-160)||(3807996-3808094)
chr7 (62-160)||(3975656-3975754)
chr7 (82-160)||(8144495-8144573)
chr7 (62-160)||(27037751-27037848)
chr7 (62-132)||(34877886-34877956)
chr7 (62-160)||(39520483-39520581)
chr7 (197-243)||(44403200-44403246)
chr7 (66-173)||(6891965-6892073)
chr7 (62-126)||(11767036-11767100)
chr7 (197-249)||(29198300-29198352)
chr7 (62-126)||(44841474-44841538)
chr7 (197-249)||(45671211-45671263)
[»] chr3 (45 HSPs)
chr3 (62-160)||(53113468-53113566)
chr3 (62-176)||(53719144-53719258)
chr3 (65-160)||(47114634-47114729)
chr3 (62-126)||(44802431-44802495)
chr3 (49-126)||(13514379-13514457)
chr3 (197-247)||(45521787-45521837)
chr3 (82-160)||(54767256-54767334)
chr3 (62-159)||(35177341-35177438)
chr3 (62-159)||(40277908-40278005)
chr3 (62-157)||(36732726-36732821)
chr3 (62-160)||(4034802-4034900)
chr3 (66-160)||(7957048-7957142)
chr3 (62-160)||(9261971-9262069)
chr3 (62-140)||(20405040-20405118)
chr3 (62-160)||(20644590-20644688)
chr3 (62-140)||(38232425-38232503)
chr3 (62-160)||(45005971-45006069)
chr3 (87-160)||(35533362-35533435)
chr3 (62-126)||(1721206-1721270)
chr3 (62-126)||(2486719-2486783)
chr3 (197-249)||(29446157-29446209)
chr3 (62-126)||(29686657-29686721)
chr3 (67-131)||(51058703-51058767)
chr3 (197-248)||(28452145-28452196)
chr3 (63-126)||(29678205-29678268)
chr3 (197-248)||(46622080-46622131)
chr3 (190-249)||(46901101-46901160)
chr3 (62-160)||(9603714-9603812)
chr3 (49-126)||(14772331-14772409)
chr3 (62-160)||(28552201-28552298)
chr3 (62-132)||(35407552-35407622)
chr3 (62-160)||(35565593-35565691)
chr3 (62-160)||(39132724-39132822)
chr3 (82-160)||(51550167-51550245)
chr3 (62-160)||(52956517-52956615)
chr3 (87-160)||(863494-863567)
chr3 (82-163)||(45002103-45002184)
chr3 (87-160)||(52342424-52342497)
chr3 (60-160)||(25609946-25610046)
chr3 (197-249)||(28942522-28942574)
chr3 (197-249)||(30130155-30130207)
chr3 (72-132)||(30268595-30268655)
chr3 (197-249)||(36672960-36673012)
chr3 (197-249)||(47114754-47114806)
chr3 (197-249)||(54767168-54767220)
[»] chr6 (24 HSPs)
chr6 (62-176)||(3276171-3276286)
chr6 (65-160)||(27764994-27765089)
chr6 (62-160)||(25121315-25121412)
chr6 (49-124)||(1214815-1214891)
chr6 (62-171)||(23628979-23629089)
chr6 (62-160)||(24901323-24901421)
chr6 (62-163)||(8169970-8170070)
chr6 (62-131)||(15443078-15443147)
chr6 (197-249)||(7324143-7324195)
chr6 (197-248)||(12176594-12176645)
chr6 (197-243)||(6468313-6468359)
chr6 (197-243)||(9896588-9896634)
chr6 (197-243)||(10091039-10091085)
chr6 (62-160)||(12298903-12299001)
chr6 (197-243)||(14428901-14428947)
chr6 (62-160)||(19320852-19320950)
chr6 (197-243)||(23628801-23628847)
chr6 (62-160)||(25137078-25137176)
chr6 (62-160)||(31198700-31198798)
chr6 (197-247)||(34990266-34990316)
chr6 (197-249)||(318048-318100)
chr6 (62-126)||(3414569-3414633)
chr6 (62-126)||(10910781-10910845)
chr6 (62-126)||(12757754-12757818)
[»] chr8 (41 HSPs)
chr8 (65-160)||(2355970-2356065)
chr8 (62-160)||(14847910-14848008)
chr8 (63-176)||(16010662-16010775)
chr8 (62-150)||(2811536-2811624)
chr8 (65-132)||(23939660-23939727)
chr8 (62-160)||(7326171-7326269)
chr8 (62-160)||(8298672-8298770)
chr8 (62-160)||(13232283-13232381)
chr8 (63-125)||(23360491-23360553)
chr8 (62-132)||(28497367-28497437)
chr8 (62-132)||(35115516-35115586)
chr8 (197-247)||(40844486-40844536)
chr8 (87-160)||(13154971-13155044)
chr8 (62-131)||(15931086-15931155)
chr8 (62-163)||(17073985-17074086)
chr8 (62-163)||(17574184-17574285)
chr8 (62-126)||(4473823-4473887)
chr8 (62-173)||(4621171-4621283)
chr8 (62-126)||(9175189-9175253)
chr8 (62-173)||(10873097-10873209)
chr8 (62-126)||(24090238-24090302)
chr8 (62-126)||(25600350-25600414)
chr8 (62-126)||(30969575-30969639)
chr8 (62-122)||(42429937-42429997)
chr8 (62-125)||(36044608-36044671)
chr8 (82-160)||(2728434-2728512)
chr8 (62-160)||(7420315-7420413)
chr8 (197-243)||(15719659-15719705)
chr8 (62-160)||(28346576-28346673)
chr8 (77-155)||(29992133-29992211)
chr8 (82-160)||(32726108-32726186)
chr8 (198-243)||(9832218-9832263)
chr8 (62-155)||(24814795-24814888)
chr8 (87-160)||(25702711-25702784)
chr8 (197-249)||(8094476-8094528)
chr8 (63-159)||(9832376-9832472)
chr8 (197-249)||(18549198-18549250)
chr8 (197-249)||(19494116-19494168)
chr8 (197-249)||(29158351-29158403)
chr8 (67-135)||(32195389-32195457)
chr8 (197-249)||(33636319-33636371)
[»] scaffold0472 (1 HSPs)
scaffold0472 (88-159)||(7031-7102)
[»] scaffold0578 (1 HSPs)
scaffold0578 (190-247)||(5014-5071)
[»] scaffold0166 (1 HSPs)
scaffold0166 (197-249)||(24369-24421)
[»] scaffold0684 (1 HSPs)
scaffold0684 (63-126)||(2414-2477)
[»] scaffold0051 (1 HSPs)
scaffold0051 (197-243)||(5659-5705)
[»] scaffold0005 (1 HSPs)
scaffold0005 (62-132)||(47978-48048)
[»] scaffold0085 (1 HSPs)
scaffold0085 (53-126)||(34893-34966)
[»] scaffold0026 (1 HSPs)
scaffold0026 (77-126)||(82460-82509)
[»] scaffold0204 (1 HSPs)
scaffold0204 (88-140)||(17231-17282)
[»] scaffold0016 (1 HSPs)
scaffold0016 (197-249)||(10466-10518)


Alignment Details
Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 48730435 - 48730549
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    ||||||||||||| |||||||||| |||||||||||||||  ||||||||||| ||||||||||| ||||| || ||||  ||| |  | ||||||||||    
T  48730435 gactatttttctacaaaataggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggtcagggaccaaagccaacacaagacatatttgt 48730534  T
Q  162 agaaccaaaaactac 176  Q
    || ||||||||||||    
T  48730535 aggaccaaaaactac 48730549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 18927961 - 18927862
Alignment:
Q  61 tgactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||||||||||  |||| |||| |||||||||||| ||  |||| |||||| ||||||||||| |||||||| ||||  ||||| ||||||||||||    
T  18927961 tgactatttttctaataaattggttcagtcatcatgtgccacgtgtgtaaatcatcacaaaagtggggtcagagaccaaaaccaaaacgaaacatatttg 18927862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 297
Target Start/End: Complemental strand, 22674382 - 22674145
Alignment:
Q  66 atttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgtagaa 165  Q
    ||||||||||||||| |||| |||||||||||| || |  || |||||| ||||||||||| | ||||||  |||   |||| || ||||||||| ||||    
T  22674382 atttttctataaaatgggttcagtcatcatgtgccacaactgtaaatcatcacaaaagtggggccagagactaaaacaaaaacgagacatatttgcagaa 22674283  T
Q  166 ccaaaaactacnnnnnnnnnnntcacagaatctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctatc-------acacacct 258  Q
    |||||||||||           | ||| |  ||||||||||||| | | |||||||||  |||  ||||||||||||| |||||        ||||||||    
T  22674282 ccaaaaactacaaaaaagaattt-acaaagactaaaaccaaaacgagacatatttgcatggacctaaaccatattttagcctatgttgttttacacacct 22674184  T
Q  259 ttccttttaattcacattataaaaccaagcctctgcttc 297  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  22674183 ttccttttaattcacattataaaaccaagcttctacttc 22674145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 26699472 - 26699362
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    ||||||||||||| || || |||| | |||||||||||||  || | |||||| ||||||||||| |||||||||||||  ||||| || |||||||||     
T  26699472 gactatttttcta-aatatgggttcaatcatcatgtgtcacgtgcgtaaatcatcacaaaagtggagtcagagatcaaaaccaaaacgagacatatttgc 26699374  T
Q  162 agaaccaaaaac 173  Q
    || |||||||||    
T  26699373 aggaccaaaaac 26699362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 18079582 - 18079504
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaa 140  Q
    ||||||||||||| ||||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | |||||| ||||    
T  18079582 gactatttttctacaaaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggggccagagaccaaa 18079504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 24510125 - 24510055
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||||||||  ||||||||| |||||||||||| || || ||||||||| ||||||||||| |||||    
T  24510125 gactatttttctaataaataggttcagtcatcatgtgccacatctgcaaatcatcacaaaagtggggtcag 24510055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 33234730 - 33234632
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| | |||||||||| || |||||||||||| ||||||||||| | ||| || |||| |||||| || |||||||||    
T  33234730 gactatttttctaataaatgggttcactcatcatgtgccacatgtgcaaatcatcacaaaagtggagccagggaccaaaatcaaaacgagacatatttg 33234632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 41738979 - 41738867
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||||||||  ||||||||| |||||||||||| ||  |||||||||||  |||||||||| |  ||||| ||||  ||||| || | ||||||||    
T  41738979 gactatttttctaataaataggttcagtcatcatgtgccacgtgtgcaaatcattacaaaagtggggcaagagaccaaaaccaaaacgagatatatttgt 41738880  T
Q  162 aga-accaaaaac 173  Q
    ||| |||||||||    
T  41738879 agagaccaaaaac 41738867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 12322788 - 12322690
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| | | |||||||| || |||||||||||| || |||||||| |||||||| |||| |||||| ||  ||||||||    
T  12322788 gactatttttctaataaattggttcaattatcatgtgccacatgtgcaaatcatcataaaagtggggtcagagaccaaaatcaaaacgaggcatatttg 12322690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 16060778 - 16060680
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || |||| |||||||||  ||||||||    
T  16060778 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaatcaaaatgaggcatatttg 16060680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 24977962 - 24977864
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| |  || || ||||  |||||||| |||||||||    
T  24977962 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagctagggaccaaaaccaaaatgagacatatttg 24977864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 10631365 - 10631457
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgtaga-accaaaaac 173  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| ||||| || ||||  |||||||| ||||||||| ||| |||||||||    
T  10631365 ggttcagtcatcatgtgacacgtgtgcaaattatcacaaaagtggagtcagggaccaaaaccaaaatgagacatatttgcagagaccaaaaac 10631457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 19198766 - 19198878
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||||| ||  |||| ||||  || |||||||| ||  ||||||||||| ||||||||||| |||||||| ||||  ||||| ||| ||||||||     
T  19198766 gactatttttttaataaatgggttccgttatcatgtgccacgtgtgcaaatcatcacaaaagtggggtcagagaccaaaaccaaaacgaagcatatttgc 19198865  T
Q  162 a-gaaccaaaaac 173  Q
    | |||||||||||    
T  19198866 aggaaccaaaaac 19198878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 26324766 - 26324834
Alignment:
Q  64 ctatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||||||  ||||||| | |||||| ||||| ||| ||||||||||| ||||||||||| |||||    
T  26324766 ctatttttctaataaataggctcagtcattatgtgacatgtgtgcaaatcatcacaaaagtggggtcag 26324834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 39747656 - 39747592
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| ||||||||||||||||| ||  ||||||||||| |||||||||||    
T  39747656 gactatttctctaataaatgggtttagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 39747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 49923644 - 49923708
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  ||||||||| ||||||||||||  | |||||||||||  |||||||||||    
T  49923644 gactatttttctaataaataggttcagtcatcatgtgctacatgtgcaaatcttcacaaaagtgg 49923708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 22953498 - 22953553
Alignment:
Q  188 tcacagaatctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    |||||| ||||||||||||||| | | |||||||||  ||||||||||||||||||    
T  22953498 tcacaggatctaaaaccaaaacgagacatatttgcagggactaaaaccatatttta 22953553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 160
Target Start/End: Complemental strand, 4789487 - 4789393
Alignment:
Q  66 atttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||  |||| |||| |||||||||||| ||  |||  |||||| ||||||||||| ||||| || |||| |||||| || |||||||||    
T  4789487 atttttctaataaatgggttcagtcatcatgtgccacgtgtttaaatcatcacaaaagtggggtcagggaccaaaatcaaaacgagacatatttg 4789393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 8364793 - 8364863
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||||| ||  ||||  ||| |||||||||||||||  ||||||||||| ||||||||||| |||||    
T  8364793 gactatttttttaataaatgagttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggtcag 8364863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 10887416 - 10887318
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  10887416 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 10887318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 17129901 - 17129999
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||| ||  |||| |||| ||||||||| || ||  ||||||||||| ||||||||||| ||||| || ||||  ||||| || |||||||||    
T  17129901 gactatttttttaataaatgggttcagtcatcatctgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaacgagacatatttg 17129999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 18899888 - 18899838
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacct 247  Q
    ||||||||||||| | | |||||||||  ||||||||||||||||||||||    
T  18899888 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttaacct 18899838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 22674564 - 22674526
Alignment:
Q  2 agtatatgttcttggctaaaatatgcttttagactttta 40  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  22674564 agtatatgttcttggcaaaaatatgcttttaaactttta 22674526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 28507298 - 28507220
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaa 140  Q
    ||||||||||||   ||||  ||| ||||||||||||||| |||||||||||| ||||||| |||  ||||||| ||||    
T  28507298 gactatttttctcataaatgagttcagtcatcatgtgtcacatgtgcaaatcatcacaaaattgggatcagagaccaaa 28507220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 34002891 - 34002937
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||||    
T  34002891 ctaaaaccaaaacaagacatatttgcagggactaaaaccatatttta 34002937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 19720916 - 19720989
Alignment:
Q  87 agtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||| ||  ||||||||| | ||||||||||| ||||| || ||||  |||||||| |||||||||    
T  19720916 agtcatcatgtgccacgtgtgcaaattatcacaaaagtggagtcagggaccaaaaccaaaatgagacatatttg 19720989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 33067395 - 33067346
Alignment:
Q  199 aaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaaccta 248  Q
    ||||||||||| | | |||||||||| |||||||||||||||||| ||||    
T  33067395 aaaaccaaaacgagacatatttgcaaggactaaaaccatattttagccta 33067346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 51986418 - 51986491
Alignment:
Q  87 agtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||||  ||||||||||| ||||||||||| |  || ||  ||| |||||| ||||||||||||    
T  51986418 agtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggctagggacgaaaatcaaaacgaaacatatttg 51986491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 4360343 - 4360296
Alignment:
Q  198 taaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacc 246  Q
    |||||||||||||| | |||||||||  |||||||||||||||||||||    
T  4360343 taaaaccaaaacaagacatatttgcag-gactaaaaccatattttaacc 4360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 15466315 - 15466251
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| |||| || ||||||||| ||  ||||||||||| |||||||||||    
T  15466315 gactatttttctaataaatgggttcagacatcatgtgccacgtgtgcaaatcatcacaaaagtgg 15466251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 34808246 - 34808194
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | ||||||| |  ||||||||||||||||||||||||    
T  34808246 ctaaaaccaaaacgagacatatttgaagggactaaaaccatattttaacctat 34808194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 39025232 - 39025168
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| ||||  ||||||||||||||   |||||||||| |||||||||||    
T  39025232 gactatttttctaataaatgggttcggtcatcatgtgtcacgagtgcaaatcatcacaaaagtgg 39025168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 41358614 - 41358666
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  41358614 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctat 41358666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 3832454 - 3832356
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  ||||||||| |||||||||||||||  ||||||||||| ||||||||||| | |||||| ||||  |||||||| |||||||||    
T  3832454 gactatttttctaataaataggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggccagagaccaaaaccaaaatgagacatatttg 3832356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 34317981 - 34317883
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| |||||||||||||||  ||||||||||| ||||||||||| | |||||| ||||  ||||||||  ||||||||    
T  34317981 gactatttttctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggccagagaccaaaaccaaaatgaggcatatttg 34317883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 38231614 - 38231516
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| | || |||||||||||| || |||||||||| | ||||||||||| |||||||| |||| |||||| || |||||||||    
T  38231614 gactatttttctaataaatggattcagtcatcatgtgccacatgtgcaaattatcacaaaagtggggtcagagaacaaaatcaaaacgagacatatttg 38231516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 44559226 - 44559324
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||||||  ||||||||||| || |||||||| ||||| |||||||  |||||||| |||||||||    
T  44559226 gactatttctctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcagaaaagtggagtcagggatcaaaaccaaaatgagacatatttg 44559324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 35155474 - 35155377
Alignment:
Q  63 actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||| |||||  ||| |||||||||||| || |||||||||||| | ||||||||| |||||||| ||||  ||||| ||| ||||||||    
T  35155474 actatttttctacaaaatgagttcagtcatcatgtggcacatgtgcaaatcatcccaaaagtggggtcagagaccaaaaccaaaacgaagcatatttg 35155377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 1295364 - 1295442
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaa 140  Q
    |||||||||||||  ||||  ||| |||||||||||| || |||||||||||| ||||||||||| ||||| |||||||    
T  1295364 gactatttttctaataaatgagttcagtcatcatgtgccacatgtgcaaatcatcacaaaagtggagtcagggatcaaa 1295442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 4042722 - 4042808
Alignment:
Q  77 aaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgtag 163  Q
    ||||||||| |||||||||||||||  ||||||||||| ||||||||||  ||||| || ||||  ||||||||  |||||||||||    
T  4042722 aaataggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtgaagtcagggaccaaaaccaaaatgaggcatatttgtag 4042808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 19831557 - 19831507
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacct 247  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  19831557 ctaaaaccaaaacgaaacatatttgcaaagactaaaaccatattttaacct 19831507  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 23732146 - 23732244
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  |||||||| |||||||||    
T  23732146 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgagacatatttg 23732244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 31909296 - 31909394
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| |||||||||||||||  ||||||||||| ||||||||||| | ||| || ||||  |||||| | |||||||||    
T  31909296 gactatttttctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggccagggaccaaaaccaaaattagacatatttg 31909394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 34963978 - 34964088
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||||||||  |||| |||| |||||||||||||||  |||||||||||  |||||||||| | |||||| ||||  ||||| ||  ||||||||     
T  34963978 gactatttttctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcattacaaaagtggggccagagaccaaaaccaaaacgaggcatatttgc 34964077  T
Q  162 agaaccaaaaa 172  Q
    || ||||||||    
T  34964078 aggaccaaaaa 34964088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 5164322 - 5164376
Alignment:
Q  71 tctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtg 125  Q
    ||||| ||||||||| |||||||||||||||  ||||||||||| ||||||||||    
T  5164322 tctatcaaataggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtg 5164376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 10671813 - 10671715
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||||||||||| || |||||||| | ||| || ||||  ||||||||| ||||||||    
T  10671813 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcagaaaagtggagccagggaccaaaaccaaaatgaagcatatttg 10671715  T

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Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 13215242 - 13215340
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| |||||||||||| || |||||||||||| || |||||||| ||||  || ||||  ||||| || |||||||||    
T  13215242 gactatttttctaataaatgggttcagtcatcatgtgccacatgtgcaaatcatcataaaagtggggtcaatgaccaaaaccaaaacgagacatatttg 13215340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 37910937 - 37911035
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| ||||||||| || || |||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  37910937 gactatttctctaataaatgggttcagtcatcatatgccacatgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 37911035  T

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Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 5006663 - 5006606
Alignment:
Q  190 acagaatctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacct 247  Q
    |||||| ||||||||||||| | |||||||||||  ||| ||||||||||||||||||    
T  5006663 acagaaactaaaaccaaaacgagatatatttgcagagaccaaaaccatattttaacct 5006606  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 20939142 - 20939239
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    |||||||||||||  |||| |||| |||||||||||| ||  |||| |||||| ||||||||||| ||||| || ||||  |||||||| | ||||||    
T  20939142 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtgtaaatcatcacaaaagtggggtcagggaccaaaaccaaaatgagaaatattt 20939239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 29865462 - 29865515
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctatc 250  Q
    ||||||||||||| ||  |||||||||| |||||||||||||||||| ||||||    
T  29865462 ctaaaaccaaaacgaagcatatttgcaaggactaaaaccatattttagcctatc 29865515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 3832588 - 3832640
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| ||| |||||||||  ||| ||||||||||||||||||||    
T  3832588 ctaaaaccaaaacgaaacatatttgcagggaccaaaaccatattttaacctat 3832640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 7121131 - 7121071
Alignment:
Q  65 tatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtg 125  Q
    ||||||||||  |||| |||||| |||||||||||||  ||||||||||| ||||||||||    
T  7121131 tatttttctaataaatgggtttaatcatcatgtgtcacgtgtgcaaatcatcacaaaagtg 7121071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 16523172 - 16523108
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||||||||||| |||||||||||    
T  16523172 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 16523108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 23990147 - 23990194
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaa 244  Q
    ||||||||||||| | | |||||||||| |||||||||||||||||||    
T  23990147 ctaaaaccaaaacgagacatatttgcaaggactaaaaccatattttaa 23990194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 40125134 - 40125051
Alignment:
Q  77 aaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  |||||||| |||||||||    
T  40125134 aaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgagacatatttg 40125051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 4424078 - 4423980
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  4424078 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 4423980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 11788235 - 11788138
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  | ||  ||| ||| ||||||||||| |||||||||||| |||||||| || |||||||| ||||  ||||| || |||||||||    
T  11788235 gactatttttctaatagatgtgttcagttatcatgtgtcacatgtgcaaatcatcacaaaag-ggggtcagagaccaaaaccaaaacgagacatatttg 11788138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 249
Target Start/End: Complemental strand, 14392819 - 14392785
Alignment:
Q  215 atatttgcaatgactaaaaccatattttaacctat 249  Q
    |||||| ||||||||||||||||||||||||||||    
T  14392819 atatttacaatgactaaaaccatattttaacctat 14392785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 37228993 - 37229039
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| |||||||||||||  ||| ||||||||||||||    
T  37228993 ctaaaaccaaaacgaaatatatttgcagggaccaaaaccatatttta 37229039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 41693723 - 41693677
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| ||| |||||||||  ||||||||||||||||||    
T  41693723 ctaaaaccaaaacgaaacatatttgcagggactaaaaccatatttta 41693677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 42696051 - 42695953
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| ||||  |||||||||  ||||||||||| ||||||||||| | ||  || ||||  |||||||| |||||||||    
T  42696051 gactatttttctaataaatgggttcagtctacatgtgtcacgtgtgcaaatcatcacaaaagtggggccaaggaccaaaaccaaaatgagacatatttg 42695953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 43672115 - 43672017
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||||||||| | ||||||||||| | ||| ||  |||  ||||| ||||||||||||    
T  43672115 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtgcaaataatcacaaaagtggggccagggacgaaaaccaaaacgaaacatatttg 43672017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 10671892 - 10671944
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  10671892 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctat 10671944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 11788367 - 11788419
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  11788367 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctat 11788419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 247
Target Start/End: Original strand, 25954395 - 25954427
Alignment:
Q  215 atatttgcaatgactaaaaccatattttaacct 247  Q
    |||||||||| ||||||||||||||||||||||    
T  25954395 atatttgcaaggactaaaaccatattttaacct 25954427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 26707922 - 26707870
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| || ||||||||||  || ||||||||||||||| |||||    
T  26707922 ctaaaaccaaaacgaagtatatttgcagggattaaaaccatattttagcctat 26707870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 27109225 - 27109161
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| |||||||||||    
T  27109225 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 27109161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 29182325 - 29182281
Alignment:
Q  88 gtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    ||||||||||||||  ||||||||||| ||||||||||| |||||    
T  29182325 gtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggagtcag 29182281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 173
Target Start/End: Complemental strand, 43200138 - 43200042
Alignment:
Q  77 aaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgtagaaccaaaaac 173  Q
    |||| |||| ||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||  ||||||||  |||||||| || |||||||||    
T  43200138 aaatgggttcagtcatcatatgtcacatgtgcaaatcatcacaaaagtggagtcagagatcaaaaccaaaatgaggcatatttgcaggaccaaaaac 43200042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 5203110 - 5203208
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| ||||||||||||||| |||||||||||| ||||||||||| | |||||| ||||  ||||||||  ||||||||    
T  5203110 gactatttctctaataaatgggttcagtcatcatgtgtcacatgtgcaaatcatcacaaaagtggagccagagaccaaaaccaaaatgaggcatatttg 5203208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 31182307 - 31182212
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatt 158  Q
    |||||||||||||  |||||| || | |||||||||||||  |||||||||||  |||||||||| |||||||||||||  |||||||| |||||||    
T  31182307 gactatttttctaataaatag-ttcaatcatcatgtgtcacgtgtgcaaatcattacaaaagtggggtcagagatcaaaaccaaaatgagacatatt 31182212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 46292515 - 46292451
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    ||||||||||||| ||||| | ||||||||||||||||||  ||||||||||| |||||||||||    
T  46292515 gactatttttctacaaaatggatttagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtgg 46292451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 42823908 - 42824003
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatat 157  Q
    |||||||||||||  ||||  ||| ||||||||||||||| |||||||||||| ||||||| ||| | |||||| |||| |||||| || ||||||    
T  42823908 gactatttttctaataaatgagttcagtcatcatgtgtcacatgtgcaaatcatcacaaaaatggggccagagaccaaaatcaaaacgagacatat 42824003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 7642470 - 7642568
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  ||||  ||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  |||||||| |||||||||    
T  7642470 gactatttttctaataaatgagttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggggtcagggaccaaaaccaaaatgagacatatttg 7642568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 20292135 - 20292233
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  ||||  ||||| |||||||||||||  ||||||||||| ||||||||||| |||||||| |||| | |||||||  ||||||||    
T  20292135 gactatttctctaataaatgagtttaatcatcatgtgtcacgtgtgcaaatcatcacaaaagtggagtcagagaccaaaattaaaatgaggcatatttg 20292233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 5797637 - 5797735
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  5797637 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 5797735  T

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Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 13530562 - 13530464
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  13530562 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 13530464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 14488004 - 14488102
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  ||||  ||| |||||||||||| ||  ||||||||||| ||||||| ||||||||| || ||||  ||||||||| ||||||||    
T  14488004 gactatttctctaataaatgagttcagtcatcatgtgccacgtgtgcaaatcatcacaaaattggtgtcagggaccaaaaccaaaatgaagcatatttg 14488102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 23245394 - 23245316
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||| ||| ||||||||| | ||||||||||| ||||| || ||||  |||||||| |||||||||    
T  23245394 ggttcagtcatcatgtgacatgtgtgcaaattatcacaaaagtggagtcagggaccaaaaccaaaatgagacatatttg 23245316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 25424129 - 25424227
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  25424129 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 25424227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 30564882 - 30564836
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||    
T  30564882 ctaaaaccaaaacaaaacatatttgcagggactaaaaccatatttta 30564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 50753971 - 50753921
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacct 247  Q
    ||||||||||||||| |||||||||||  ||| ||||||||||||||||||    
T  50753971 ctaaaaccaaaacaagatatatttgcagggaccaaaaccatattttaacct 50753921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 52543546 - 52543644
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| | || |||||||||||| ||  ||||||||||| || |||||||| ||||  || |||| ||||||||| |||||||||    
T  52543546 gactatttttctaataaatggattcagtcatcatgtgacacgtgtgcaaatcatcagaaaagtggggtcatggaccaaaatcaaaatgagacatatttg 52543644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 12152353 - 12152422
Alignment:
Q  105 gtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgta-gaaccaaaaac 173  Q
    |||||||||| ||||||||||| |||||||| ||||  ||||| |||||||||||| | |||||||||||    
T  12152353 gtgcaaatcatcacaaaagtggggtcagagaccaaaaccaaaacgaaacatatttgcaggaaccaaaaac 12152422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 51738293 - 51738386
Alignment:
Q  67 tttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||||  ||||| ||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || |||| |||||| ||  ||||||||    
T  51738293 tttttctaataaataagttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaatcaaaacgaggcatatttg 51738386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 22584336 - 22584284
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||| |||||||||||||||||| |||||    
T  22584336 ctaaaaccaaaacgagacatatttgcaaggactaaaaccatattttagcctat 22584284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 46115596 - 46115660
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| ||||||||||||||||| ||  ||||||||||| |||||||||||    
T  46115596 gactatttctctaataaatgggtttagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 46115660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 46128730 - 46128794
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| ||||||||||||||||| ||  ||||||||||| |||||||||||    
T  46128730 gactatttctctaataaatgggtttagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 46128794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 53716970 - 53716918
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||||| | |||||||||  |||||||||||||||||| |||||    
T  53716970 ctaaaaccaaaacaagacatatttgcagggactaaaaccatattttagcctat 53716918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 6353470 - 6353553
Alignment:
Q  77 aaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||| ||| |||||||||||| || ||||||||||||  |||||||||| | |||||| ||||  ||||||||  ||||||||    
T  6353470 aaatatgttcagtcatcatgtgccacatgtgcaaatcataacaaaagtggagccagagaccaaaaccaaaatgaggcatatttg 6353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 9837000 - 9836905
Alignment:
Q  68 ttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgtag 163  Q
    |||||||  |||| ||||||||||||||||| ||  ||||||||||| || |||||||| | ||| || |||| |||||| |  ||||||||||||    
T  9837000 ttttctaataaatgggtttagtcatcatgtgacacgtgtgcaaatcatcataaaagtggggacagggaccaaaatcaaaacgtgacatatttgtag 9836905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 14791683 - 14791753
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||||||||  |||| |||| | |||||| ||||||  ||||||||||| ||||||||||| |||||    
T  14791683 gactatttttctaataaatgggttcaatcatcaagtgtcaagtgtgcaaatcatcacaaaagtggggtcag 14791753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 19321733 - 19321655
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||||||  ||||||||| | ||||||||||| |||||  | ||||  |||||||| |||||||||    
T  19321733 ggttcagtcatcatgtgtcacgtgtgcaaattatcacaaaagtggagtcaggaaccaaaaccaaaatgagacatatttg 19321655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 19903444 - 19903346
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||| ||  |||| |||| | |||||||||| || |||||||||||| ||||||||||  | ||| || ||||  |||||||| |||||||||    
T  19903444 gactatttttttaataaattggttcactcatcatgtgccacatgtgcaaatcatcacaaaagtgtggccagggaccaaaaccaaaatgagacatatttg 19903346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 24774244 - 24774342
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  24774244 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 24774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 26412421 - 26412499
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| ||||| || ||||  |||||||| |||||||||    
T  26412421 ggttaagtcatcatgtgacacgtgtgcaaattatcacaaaagtggagtcagggaccaaaaccaaaatgagacatatttg 26412499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 28809060 - 28809014
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| | | |||||||||| ||||||||||||||||||    
T  28809060 ctaaaaccaaaacgatacatatttgcaaggactaaaaccatatttta 28809014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 31812106 - 31812008
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||||||  ||||||||||| || |||||||| | ||| || ||||  ||||||||  ||||||||    
T  31812106 gactatttctctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcataaaagtggagccagggaccaaaaccaaaatgaggcatatttg 31812008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 42848228 - 42848306
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| ||||| || ||||  |||||||| |||||||||    
T  42848228 ggttcagtcatcatgtgacacgtgtgcaaattatcacaaaagtggagtcagggaccaaaaccaaaatgagacatatttg 42848306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 43368514 - 43368468
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| ||| |||||||||  ||||||||||||||||||    
T  43368514 ctaaaaccaaaacgaaacatatttgcagggactaaaaccatatttta 43368468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 52442043 - 52442089
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| | | |||||||||| ||||||||||||||||||    
T  52442043 ctaaaaccaaaacgagacatatttgcaaggactaaaaccatatttta 52442089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 5827838 - 5827741
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    |||||||||||||  ||||  ||| | |||||||||| || || ||||||||| ||||||||||| ||||| || ||||  ||||| || ||||||||    
T  5827838 gactatttttctaataaatgagttcactcatcatgtgccacatatgcaaatcatcacaaaagtggggtcagggaccaaaaccaaaacgagacatattt 5827741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 35119446 - 35119373
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagaga 135  Q
    |||||||||||||  |||| |||| |||||||||||  ||  ||||||||||| ||||||||||| | ||||||    
T  35119446 gactatttttctaataaatgggttcagtcatcatgtaccacgtgtgcaaatcatcacaaaagtggggacagaga 35119373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 51763020 - 51763117
Alignment:
Q  63 actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||| ||||  |||| |||| ||||||||| |||||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  51763020 actatttctctaataaatgggttcagtcatcatttgtcacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 51763117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 4211684 - 4211620
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| |||| | |||||||||| ||  ||||||||||| |||||||||||    
T  4211684 gactatttttctaataaatgggttcaatcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 4211620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 9289315 - 9289263
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  9289315 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctat 9289263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 160
Target Start/End: Complemental strand, 11692942 - 11692846
Alignment:
Q  64 ctatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||  |||| |||| |||||||||||| ||  | || |||||| ||||||||||| ||||| || |||| |||||| ||  ||||||||    
T  11692942 ctatttttctaataaatgggttcagtcatcatgtgccacgtatgaaaatcatcacaaaagtggggtcagggaccaaaatcaaaacgaggcatatttg 11692846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 13631442 - 13631514
Alignment:
Q  88 gtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||||||| ||  ||||||||| | ||||||||||| | ||| |||||||  |||||||| |||||||||    
T  13631442 gtcatcatgtgccacgtgtgcaaattatcacaaaagtggagccagtgatcaaaaccaaaatgagacatatttg 13631514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 25358388 - 25358456
Alignment:
Q  64 ctatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    ||||||||||| |||||  ||| |||||||||||| ||  ||| ||||||| ||||||||||| |||||    
T  25358388 ctatttttctacaaaatgagttcagtcatcatgtgccacgtgttcaaatcatcacaaaagtggggtcag 25358456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 36050469 - 36050405
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| |||| ||||||||| || ||  ||||||||||| |||||||||||    
T  36050469 gactatttttctaataaatgggttcagtcatcatatgccacgtgtgcaaatcatcacaaaagtgg 36050405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 51545920 - 51545972
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| |   |||||||||  ||||||||||||||||||||||||    
T  51545920 ctaaaaccaaaacgaggcatatttgcagggactaaaaccatattttaacctat 51545972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 5103818 - 5103925
Alignment:
Q  53 attttgtatgactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaa 152  Q
    |||||| | |||||| ||||||  |||| |||| ||||||||||||||| |||||||||||| |||||||||||  ||||| | |||| |||||| ||||    
T  5103818 attttgcaggactatatttctaataaatgggttcagtcatcatgtgtcacatgtgcaaatcatcacaaaagtgggatcagaaaccaaaatcaaaacgaaa 5103917  T
Q  153 catatttg 160  Q
    ||||||||    
T  5103918 catatttg 5103925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 12145060 - 12145158
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| | ||||||||||| |||||||||||||| || |||||||| | |||||| |||| |||||| || |||||||||    
T  12145060 gactatttttctaataaatgggttcactcatcatgtgttatatgtgcaaatcatcaaaaaagtggggccagagaccaaaatcaaaacgagacatatttg 12145158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 176
Target Start/End: Complemental strand, 15916465 - 15916354
Alignment:
Q  65 tatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt-ag 163  Q
    |||||||||||||||| |||| | |||| |||||||| |||||||||||| ||||||||||  ||||| || ||||  ||||| || |||||||||| ||    
T  15916465 tatttttctataaaatgggttcattcat-atgtgtcacatgtgcaaatcatcacaaaagtgaggtcagggaccaaaaccaaaacgagacatatttgtaag 15916367  T
Q  164 aaccaaaaactac 176  Q
     ||||||||||||    
T  15916366 gaccaaaaactac 15916354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 140
Target Start/End: Complemental strand, 28213556 - 28213478
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaa 140  Q
    |||||||||||||  |||| |||| |||||||||||||||  ||||||||||| ||||||||||| | |||||| ||||    
T  28213556 gactatttttctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggccagagaccaaa 28213478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 26071473 - 26071375
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| ||||||||||||  |  ||||||||||| ||||||||||| ||||||||  ||| |||||| ||  ||||||||    
T  26071473 gactatttttctaataaatgggttcagtcatcatgtgctacgtgtgcaaatcatcacaaaagtggggtcagagactaaaatcaaaacgaggcatatttg 26071375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 40038678 - 40038580
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  ||||||||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || |||| | |||||||  ||||||||    
T  40038678 gactatttctctaataaataggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaatgaaaatgaggcatatttg 40038580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 10830709 - 10830600
Alignment:
Q  65 tatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgtag- 163  Q
    ||||||||||  |||| |||| ||||||| |||||||  ||||||||||| ||||||||||| ||||| || ||||  ||||| ||  |||||||| ||     
T  10830709 tatttttctaataaatgggttcagtcatcttgtgtcacgtgtgcaaatcatcacaaaagtggggtcagggaccaaaaccaaaacgagccatatttgcagc 10830610  T
Q  164 aaccaaaaac 173  Q
    ||||||||||    
T  10830609 aaccaaaaac 10830600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 2636852 - 2636788
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| ||||||||||||||||| ||  ||||||||||| |||||||||||    
T  2636852 gactatttctctaataaatgggtttagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 2636788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 24782038 - 24781986
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | ||||||||| ||||||||||||||||||| |||||    
T  24782038 ctaaaaccaaaacgagacatatttgcagtgactaaaaccatattttagcctat 24781986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 42596636 - 42596572
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| |||| ||| |||||||||||| ||| ||||||| |||||||||||    
T  42596636 gactatttttctaataaatgggttcagttatcatgtgtcatgtgtccaaatcatcacaaaagtgg 42596572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 45335 - 45418
Alignment:
Q  77 aaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| ||||||||||||||||  ||  ||||||||||| ||||||| ||  |||||||| ||||  |||||||| |||||||||    
T  45335 aaatgggtttagtcatcatgtaccacgtgtgcaaatcatcacaaaaatgaagtcagagaccaaaaccaaaatgagacatatttg 45418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 10744005 - 10744056
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaaccta 248  Q
    ||||||||||||| | | |||||||||| |||||||||||||||||| ||||    
T  10744005 ctaaaaccaaaacgagacatatttgcaaggactaaaaccatattttagccta 10744056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 14318094 - 14318043
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaaccta 248  Q
    ||||||||||||| | | |||||||||| |||||||||||||||||| ||||    
T  14318094 ctaaaaccaaaacgagacatatttgcaaggactaaaaccatattttagccta 14318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 19685179 - 19685088
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgtagaaccaaaaac 173  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| | ||| || ||||  |||||||| ||||||||| || |||||||||    
T  19685179 ggttcagtcatcatgtgccacgtgtgcaaattatcacaaaagtggagccagggaccaaaaccaaaatgagacatatttgcaggaccaaaaac 19685088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 20661131 - 20661036
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatat 157  Q
    |||||||||||||  ||||  ||| | |||||||||||||  ||||||||||| ||||||||||| ||||| || ||||  ||||| || ||||||    
T  20661131 gactatttttctaataaatgagttcaatcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggtcagggaccaaaaccaaaacgagacatat 20661036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 9179642 - 9179596
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| ||  |||||||||| ||||||||||||||||||    
T  9179642 ctaaaaccaaaacgaatcatatttgcaaggactaaaaccatatttta 9179596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 9532486 - 9532536
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacct 247  Q
    ||||||||||||| |   |||||||||| ||||||||||||||||||||||    
T  9532486 ctaaaaccaaaacgaggcatatttgcaaggactaaaaccatattttaacct 9532536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 15635425 - 15635379
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||||    
T  15635425 ctaaaaccaaaacaagacatatttgcatggactaaaaccatatttta 15635379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 17070718 - 17070648
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    ||||||||||||| ||||| | || | |||||||||| ||  ||||||||||| ||||||||||| |||||    
T  17070718 gactatttttctacaaaatggattcattcatcatgtgccacgtgtgcaaatcatcacaaaagtggggtcag 17070648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 18258326 - 18258248
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||| | ||||| |||||||  |||||||| |||||||||    
T  18258326 ggttcagtcatcatgtgacacgtgtgcaaattatcacaaaagtcgagtcagggatcaaaaccaaaatgagacatatttg 18258248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 18286476 - 18286426
Alignment:
Q  198 taaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaaccta 248  Q
    |||||||||||||| | |||||||||   ||||||||||||||||||||||    
T  18286476 taaaaccaaaacaagacatatttgcaggaactaaaaccatattttaaccta 18286426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 22551270 - 22551316
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||||||| |||||| ||  ||||||||||||||||||    
T  22551270 ctaaaaccaaaacaaaacatatttacagagactaaaaccatatttta 22551316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 29855790 - 29855692
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||||||||   |||| |||| |||| ||||||| |   ||||||||||| ||||||||||  |||||||| |||| |||||| || |||||||||    
T  29855790 gactatttttctcataaatgggttcagtcgtcatgtgccgcgtgtgcaaatcatcacaaaagtgaggtcagagaccaaaatcaaaacgagacatatttg 29855692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 36973536 - 36973438
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| | || |||||||||||||||  ||||||||||| ||||||||||| |  || || |||| |||||||||  ||||||||    
T  36973536 gactatttctctaataaatggattcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggagctagggaccaaaatcaaaatgaggcatatttg 36973438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 37271543 - 37271621
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| ||||| || ||||  |||||||| |||||||||    
T  37271543 ggttcagtcatcatgtgccacgtgtgcaaattatcacaaaagtggagtcagggaccaaaaccaaaatgagacatatttg 37271621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 38496733 - 38496779
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| ||| |||||||||  ||||||||||||||||||    
T  38496733 ctaaaaccaaaacgaaacatatttgcagggactaaaaccatatttta 38496779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 40764597 - 40764500
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||||| || |||||||||||| || |||||||||| | ||||||||||| | ||| || ||||  |||||||| |||||||||    
T  40764597 gactatttctctaataaatag-ttaagtcatcatgtgacacatgtgcaaattatcacaaaagtggagccagggaccaaaaccaaaatgagacatatttg 40764500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 6912656 - 6912583
Alignment:
Q  87 agtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||| || |||||||||| | ||||||||||| | ||| || ||||  |||||||| |||||||||    
T  6912656 agtcatcatgtgacacatgtgcaaattatcacaaaagtggagccagggaccaaaaccaaaatgagacatatttg 6912583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 35609441 - 35609392
Alignment:
Q  77 aaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||| |||| |||||||||||||||  ||||||||||| |||||||||||    
T  35609441 aaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtgg 35609392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 42553827 - 42553726
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    ||||| |||||||  ||||  ||| ||| |||||||||||  ||||||||||| |   ||||||| |||||||| |||| |||||| || ||||||||||    
T  42553827 gactacttttctaataaatgagttcagttatcatgtgtcacgtgtgcaaatcatctgtaaagtggggtcagagaccaaaatcaaaacgagacatatttgt 42553728  T
Q  162 ag 163  Q
    ||    
T  42553727 ag 42553726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 45456 - 45504
Alignment:
Q  198 taaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacc 246  Q
    |||||||||||| ||| |||||||||  ||| |||||||||||||||||    
T  45456 taaaaccaaaacgaaacatatttgcagggaccaaaaccatattttaacc 45504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 4736359 - 4736471
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  |||||| |||| ||||||||||| ||||| ||  |||  ||||||||  ||||||||     
T  4736359 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcagatcatcacaaaagtggagtcagggacaaaaaccaaaatgaggcatatttgc 4736458  T
Q  162 aga-accaaaaac 173  Q
    ||| |||||||||    
T  4736459 agagaccaaaaac 4736471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 9588429 - 9588541
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  | || |||| | ||||||||||| ||||| |||||||  ||||||||  ||||||||     
T  9588429 gactatttctctaataaatgggttcagtcatcatgtgccacgtatgtaaattatcacaaaagtggagtcagcgatcaaaaccaaaatgaggcatatttgc 9588528  T
Q  162 aga-accaaaaac 173  Q
    ||| |||||||||    
T  9588529 agagaccaaaaac 9588541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 23381999 - 23381947
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  23381999 ctaaaaccaaaaccagacatatttgcagggactaaaaccatattttagcctat 23381947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 31602330 - 31602266
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    ||||||||||||| ||||| |||| | | |||||||| ||  ||||||||||| |||||||||||    
T  31602330 gactatttttctacaaaatgggttcaattatcatgtgccacgtgtgcaaatcatcacaaaagtgg 31602266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 32108990 - 32108926
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| |||||||||||    
T  32108990 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 32108926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 32888863 - 32888799
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| |||| |||||||||||| ||  |||| |||||| |||||||||||    
T  32888863 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtgtaaatcatcacaaaagtgg 32888799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 36577771 - 36577719
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  36577771 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctat 36577719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 16906 - 16808
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| |||||||||||| || |||||||||||| ||||||||||| ||||| || ||||  |||||||| |||||||||    
T  16906 gactatttttctaataaatgggttcagtcatcatgtgccacatgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgagacatatttg 16808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 39438846 - 39438944
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||||||||||||||||||| |||||||||||| ||||||||||| ||||| || ||||  |||||| | |||||||||    
T  39438846 gactatttctctaataaatgggtttagtcatcatgtgtcacatgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaataagacatatttg 39438944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 48852627 - 48852529
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| ||||||||||||||| |||||||||||| ||||||||||| | ||| || |||| |||||||||  ||||||||    
T  48852627 gactatttctctaataaatgggttcagtcatcatgtgtcacatgtgcaaatcatcacaaaagtggagccagggaccaaaatcaaaatgaggcatatttg 48852529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 24717351 - 24717254
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    |||||||||||||  |||| |||| |||||||||||||||| |||||||||||  ||||||||||   ||| || |||| ||||||||| ||||||||    
T  24717351 gactatttttctaataaatgggttcagtcatcatgtgtcatgtgtgcaaatcattacaaaagtgggagcagggaccaaaatcaaaatgagacatattt 24717254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 38186565 - 38186690
Alignment:
Q  49 aaatattttgtatg-actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaa 147  Q
    |||||||||| ||| ||||||| |||| ||||| |||| |||||||||||||||  ||||||||||| ||||||||||  |  || || |||| ||||||    
T  38186565 aaatattttgcatggactatttatctacaaaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtgaggctagggaccaaaatcaaaa 38186664  T
Q  148 tgaaacatatttgtagaaccaaaaac 173  Q
    | || |||||||| || |||||||||    
T  38186665 ttaagcatatttgcaggaccaaaaac 38186690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 37527239 - 37527337
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  ||||  ||| || ||||||||||||  ||||||||||| ||||||||||| | || ||| |||| ||||||||| |||||||||    
T  37527239 gactatttttctaataaatgagttcaggcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggccaaagaccaaaatcaaaatgagacatatttg 37527337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 46829127 - 46829197
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||||||||  |||| |||| | |||||||||||||| ||||||||||| ||||||||||| |||||    
T  46829127 gactatttttctaataaattggttcaatcatcatgtgtcatgtgtgcaaatcatcacaaaagtggagtcag 46829197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 22540110 - 22540207
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    |||||||||||||  ||||  ||| | |||||||||| || |||||||||||| |||||||||||  ||||||| |||| |||||| || ||||||||    
T  22540110 gactatttttctaataaatgagttcaatcatcatgtgccaaatgtgcaaatcatcacaaaagtgggatcagagaccaaaatcaaaacgagacatattt 22540207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 38486610 - 38486722
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||||||||  ||||  ||| |||||||||||| ||  ||||||||||| ||||||||||  | |||||| |||| |||||| || |||||||||     
T  38486610 gactatttttctaataaatgagttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgtggacagagaccaaaatcaaaacgagacatatttgc 38486709  T
Q  162 a-gaaccaaaaac 173  Q
    | |||||||||||    
T  38486710 aggaaccaaaaac 38486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 45671499 - 45671551
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||| ||||| | | |||||||||||||||||||||||||||||||||||    
T  45671499 ctaaaactaaaacgagacatatttgcaatgactaaaaccatattttaacctat 45671551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 160
Target Start/End: Original strand, 28529085 - 28529184
Alignment:
Q  61 tgactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||||||||||  |||| | || |||||| ||||||||  ||||||||||| ||||||||||| | ||| |||||||  ||||| || |||||||||    
T  28529085 tgactatttttctaataaatggattcagtcattatgtgtcacgtgtgcaaatcatcacaaaagtggagccagtgatcaaaaccaaaacgagacatatttg 28529184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 9659538 - 9659440
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  9659538 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 9659440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 30223644 - 30223546
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| |  || || ||||  ||||||||||||||||||    
T  30223644 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagctagggaccaaaaccaaaatgaaacatatttg 30223546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 35666058 - 35665960
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  ||||  ||| |||||||||||||||  | ||||||||| ||||||||||| ||||| || ||||  ||||| || |||||||||    
T  35666058 gactatttttctaataaatgagttcagtcatcatgtgtcacgtatgcaaatcatcacaaaagtggggtcagggaccaaaaccaaaacgagacatatttg 35665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 41053993 - 41054091
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| || |||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  41053993 gactatttctctaataaatgggttcagtcatcatgtgccacatgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 41054091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 46759790 - 46759860
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||| ||||  |||| |||| |||||||||||||||  ||||||||||| ||||||||||| |||||    
T  46759790 gactatttctctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggagtcag 46759860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 160
Target Start/End: Original strand, 5354936 - 5355033
Alignment:
Q  63 actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||| ||||||||    
T  5354936 actatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaagcatatttg 5355033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 35838107 - 35838010
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    |||||||| ||||  |||| |||  |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  |||||||| ||||||||    
T  35838107 gactatttctctaataaatgggtccagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgagacatattt 35838010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 6589144 - 6589080
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| |||| |||||||||||||||  ||||||||||| |||||||||||    
T  6589144 gactatttctctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtgg 6589080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 27458567 - 27458484
Alignment:
Q  77 aaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||| |||||||||||||||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  27458567 aaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 27458484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 1974058 - 1974012
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| ||| |||||||||  ||||||||||||||||||    
T  1974058 ctaaaaccaaaacgaaacatatttgcagggactaaaaccatatttta 1974012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 3807996 - 3808094
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| ||||  ||||||||||||||  ||||||||||| ||||||||||  ||||||||  |||  ||||| || |||||||||    
T  3807996 gactatttatctaataaatgggttcggtcatcatgtgtcacgtgtgcaaatcatcacaaaagtgaggtcagagactaaaaccaaaacgagacatatttg 3808094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 3975656 - 3975754
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  ||||  ||| |||||||||||| ||  |||||||||||  |||||||||| ||||| || ||||  ||||||||  ||||||||    
T  3975656 gactatttttctaataaatgagttcagtcatcatgtgccacgtgtgcaaatcattacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 3975754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 8144495 - 8144573
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| | ||| |||||||  |||||||| |||||||||    
T  8144495 ggttaagtcatcatgtgacacgtgtgcaaattatcacaaaagtggagccagggatcaaaaccaaaatgagacatatttg 8144573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 27037751 - 27037848
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||||| || |||||||||||| || |||||||||| | ||||||||||| | ||| || ||||  |||||||| |||||||||    
T  27037751 gactatttctctaataaatag-ttaagtcatcatgtgacacatgtgcaaattatcacaaaagtggagccagggaccaaaaccaaaatgagacatatttg 27037848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 34877956 - 34877886
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    ||||||||||||| ||||| |||| | |||||||||| |   ||||||||||| ||||||||||| |||||    
T  34877956 gactatttttctaaaaaatgggttcaatcatcatgtgccgcgtgtgcaaatcatcacaaaagtggggtcag 34877886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 39520581 - 39520483
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  |||||||| | |||||||    
T  39520581 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgagatatatttg 39520483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 44403200 - 44403246
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| | | |||||||||| ||||||||||||||||||    
T  44403200 ctaaaaccaaaacgagacatatttgcaaggactaaaaccatatttta 44403246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 6892073 - 6891965
Alignment:
Q  66 atttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgtaga- 164  Q
    |||||||||  |||| |||| ||||||| | || ||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  |||||||| |||     
T  6892073 atttttctaataaatgggttcagtcatcttctgccacctgtgcaaatcatcacaaaagtggggtcagggaccaaaaccaaaatgaggcatatttgcagag 6891974  T
Q  165 accaaaaac 173  Q
    |||||||||    
T  6891973 accaaaaac 6891965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 11767100 - 11767036
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| |||||||||||    
T  11767100 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 11767036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 29198352 - 29198300
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | |||||||||||  ||| |||||||||||||| |||||    
T  29198352 ctaaaaccaaaacgagatatatttgcagggaccaaaaccatattttagcctat 29198300  T

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Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 44841538 - 44841474
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||| ||||||| |||||||||||    
T  44841538 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtccaaatcatcacaaaagtgg 44841474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 45671263 - 45671211
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||| ||||| | | |||||||||  ||||||||||||||||||||||||    
T  45671263 ctaaaactaaaacgagacatatttgcatggactaaaaccatattttaacctat 45671211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 53113566 - 53113468
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  ||||||||| |||||||||||| ||| ||||||||||| ||||||||||| ||||| || ||||  ||||| || |||||||||    
T  53113566 gactatttttctaataaataggttcagtcatcatgtgccatgtgtgcaaatcatcacaaaagtggggtcagtgaccaaaaacaaaacgagacatatttg 53113468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 53719144 - 53719258
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    ||||||||||||| ||||| | || ||||||||||| |||  ||||||||||| ||||||||||  ||||| ||||||| |||||| || |||||||||     
T  53719144 gactatttttctacaaaatggattcagtcatcatgtatcacgtgtgcaaatcatcacaaaagtgaggtcagtgatcaaaatcaaaacgagacatatttgc 53719243  T
Q  162 agaaccaaaaactac 176  Q
    || | ||||||||||    
T  53719244 aggatcaaaaactac 53719258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 47114634 - 47114729
Alignment:
Q  65 tatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||||||  |||| |||| |||||||||||||||  ||||||||||| ||||||||||  |||||||||||||  ||||| || |||||||||    
T  47114634 tatttttctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtgaggtcagagatcaaaaccaaaacgagacatatttg 47114729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 44802431 - 44802495
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  ||||||||| |||||| ||||||||| ||||||||||| |||||||||||    
T  44802431 gactatttttctaataaataggttcagtcattatgtgtcatgtgtgcaaatcatcacaaaagtgg 44802495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 13514379 - 13514457
Alignment:
Q  49 aaatattttgtat-gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    ||||||||| ||| ||||||||||||||||||| || | ||||||||||||||| |||||||||| | || ||||||||    
T  13514379 aaatattttatattgactatttttctataaaattggatcagtcatcatgtgtcacatgtgcaaataatcataaaagtgg 13514457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 45521787 - 45521837
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacct 247  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  45521787 ctaaaaccaaaacgaaacatatttgcaaagactaaaaccatattttaacct 45521837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 54767334 - 54767256
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||||||  || |||||||| ||||||||||| |||||||||||||  ||||| || |||||||||    
T  54767334 ggttcagtcatcatgtgtcacgtgagcaaatcatcacaaaagtggggtcagagatcaaaaacaaaacgagacatatttg 54767256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 35177438 - 35177341
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | |||||| ||||  ||||| || ||||||||    
T  35177438 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagagaccaaaaccaaaacgagacatattt 35177341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 40278005 - 40277908
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || |||| |||||| || ||||||||    
T  40278005 gactatttatctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggggtcagggaccaaaatcaaaacgagacatattt 40277908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 36732821 - 36732726
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatat 157  Q
    |||||||||||||  || | |||| |||||||||||| || |||||||||||| ||||||||||| |||||  | ||||  |||||||| ||||||    
T  36732821 gactatttttctaataactgggttcagtcatcatgtgccacatgtgcaaatcatcacaaaagtggggtcaggaaccaaaaccaaaatgagacatat 36732726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 4034900 - 4034802
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  4034900 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 4034802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 160
Target Start/End: Original strand, 7957048 - 7957142
Alignment:
Q  66 atttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  ||||| || |||||||||    
T  7957048 atttttctaataaattggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggggtcagggaccaaaaccaaaacgagacatatttg 7957142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 9261971 - 9262069
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  9261971 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 9262069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 20405040 - 20405118
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaa 140  Q
    |||||||| ||||  |||| |||| |||||||||||||||  | ||||||||| ||||||||||| |||||||| ||||    
T  20405040 gactatttctctaataaatgggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaagtggagtcagagaccaaa 20405118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 20644688 - 20644590
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| | |||||||||| || |||||||||||| ||||||||||| | ||| || ||||  ||||| || |||||||||    
T  20644688 gactatttttctaataaatgggttcactcatcatgtgccacatgtgcaaatcatcacaaaagtggggccagggaccaaaaccaaaacgagacatatttg 20644590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 38232425 - 38232503
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaa 140  Q
    |||||||||||||  |||| |||| |||||||||||||||  ||| ||||||| ||||||||||  ||||| |||||||    
T  38232425 gactatttttctaataaatgggttcagtcatcatgtgtcacgtgtacaaatcatcacaaaagtgaggtcagggatcaaa 38232503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 45006069 - 45005971
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||||||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  45006069 gactatttctctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 45005971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 35533435 - 35533362
Alignment:
Q  87 agtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||| ||  ||||||||||| ||||||||||| || ||||| |||| |||||| || |||||||||    
T  35533435 agtcatcatgtgccacgtgtgcaaatcatcacaaaagtggggttagagaccaaaatcaaaacgagacatatttg 35533362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 1721270 - 1721206
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| |||| | |||||||||| || |||||||||||| |||||||||||    
T  1721270 gactatttttctaataaatgggttcactcatcatgtgccacatgtgcaaatcatcacaaaagtgg 1721206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 2486719 - 2486783
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||||||||||| |||||||||||    
T  2486719 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 2486783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 29446157 - 29446209
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||||| | |||||||||  |||||||||||||||||| |||||    
T  29446157 ctaaaaccaaaacaagacatatttgcagggactaaaaccatattttagcctat 29446209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 29686721 - 29686657
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| ||||||||||||||||| ||  ||| ||||||| |||||||||||    
T  29686721 gactatttttctaataaatgggtttagtcatcatgtgccacgtgttcaaatcatcacaaaagtgg 29686657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 51058767 - 51058703
Alignment:
Q  67 tttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtca 131  Q
    ||||| ||||||||  ||| ||||||||||||||| || ||||||||| ||||||||||| ||||    
T  51058767 tttttttataaaatgagttcagtcatcatgtgtcacatatgcaaatcatcacaaaagtggagtca 51058703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 28452196 - 28452145
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaaccta 248  Q
    ||||||||||||||| | |||||||||| ||| |||||||||||||| ||||    
T  28452196 ctaaaaccaaaacaagacatatttgcaaggaccaaaaccatattttagccta 28452145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 29678205 - 29678268
Alignment:
Q  63 actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    ||||||||||||  |||| |||||||||||| |||| ||  ||||||||||| |||||||||||    
T  29678205 actatttttctaataaatgggtttagtcatcttgtgccacgtgtgcaaatcatcacaaaagtgg 29678268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 46622080 - 46622131
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaaccta 248  Q
    ||||||||||||| ||| |||||||||| ||| |||||||||||||| ||||    
T  46622080 ctaaaaccaaaacgaaacatatttgcaaggaccaaaaccatattttagccta 46622131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 46901160 - 46901101
Alignment:
Q  190 acagaatctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    |||||| ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  46901160 acagaaactaaaaccaaaacgatacatatttgcagagactaaaaccatattttagcctat 46901101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 9603812 - 9603714
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  ||||  ||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  |||||| | |||||||||    
T  9603812 gactatttctctaataaatgagttcagtcatcatgtgacacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaataagacatatttg 9603714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 14772409 - 14772331
Alignment:
Q  49 aaatattttgtatg-actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||| |||||||||| | ||||| |||| | |||||||||| ||  ||| ||||||| |||||||||||    
T  14772409 aaatattttgtatggactatttttccacaaaatgggttcaatcatcatgtgccacgtgtacaaatcatcacaaaagtgg 14772331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 28552201 - 28552298
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||||| || |||||||||||| || |||||||||| | ||||||||||| | ||| || ||||  |||||||| |||||||||    
T  28552201 gactatttctctaataaatag-ttaagtcatcatgtgacacatgtgcaaattatcacaaaagtggagccagggaccaaaaccaaaatgagacatatttg 28552298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 35407622 - 35407552
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||| ||||||| ||||||||||| |||||    
T  35407622 gactatttttctaataaatgggttcagtcatcatgtgccacctgtacaaatcatcacaaaagtggggtcag 35407552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 35565691 - 35565593
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||||||  |||  ||||||||  ||||||||    
T  35565691 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagagactaaaaccaaaatgaggcatatttg 35565593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 39132724 - 39132822
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  ||||  ||| |||||||||| ||||  ||||||||||| ||||||||||| | ||| || ||||  ||||| || |||||||||    
T  39132724 gactatttttctaataaatgagttcagtcatcatgcgtcacgtgtgcaaatcatcacaaaagtggggccagggaccaaaaccaaaacgagacatatttg 39132822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 51550245 - 51550167
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| | ||| |||||||  |||||||| |||||||||    
T  51550245 ggttaagtcatcatgtgacacgtgtgcaaattatcacaaaagtggagccagggatcaaaaccaaaatgagacatatttg 51550167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 52956517 - 52956615
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||||||  |||| |||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  52956517 gactatttctctaataaatgggttcagtcatcatgtgtcacgtgtgtaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 52956615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 863494 - 863567
Alignment:
Q  87 agtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||| ||| |||||||||||  | |||||||| ||||| || ||||  |||||||| |||||||||    
T  863494 agtcatcatgtgccatgtgtgcaaatcataataaaagtggggtcagggaccaaaaccaaaatgagacatatttg 863567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 45002184 - 45002103
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgtag 163  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| | ||| || ||||  |||||||| ||||||||||||    
T  45002184 ggttcagtcatcatgtgccacgtgtgcaaattatcacaaaagtggagccagggaccaaaaccaaaatgagacatatttgtag 45002103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 52342424 - 52342497
Alignment:
Q  87 agtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  52342424 agtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 52342497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 160
Target Start/End: Original strand, 25609946 - 25610046
Alignment:
Q  60 atgactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    |||||| ||||||||  |||| |||| |||||||||||| ||  ||| ||||||| || |||||||| ||||| || ||||  ||||| || ||||||||    
T  25609946 atgactgtttttctaataaatgggttcagtcatcatgtgccacgtgttcaaatcatcagaaaagtggagtcagggaccaaaaccaaaacgagacatattt 25610045  T
Q  160 g 160  Q
    |    
T  25610046 g 25610046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 28942574 - 28942522
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    |||||||||||||||   |||||||||  |||||||||||||||||| |||||    
T  28942574 ctaaaaccaaaacaaggcatatttgcagggactaaaaccatattttagcctat 28942522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 30130207 - 30130155
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  30130207 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctat 30130155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 30268655 - 30268595
Alignment:
Q  72 ctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    ||||||||| |||| |||||||||||||||  | ||||||||| ||||||| ||| |||||    
T  30268655 ctataaaatcggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaaatggggtcag 30268595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 36673012 - 36672960
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||||| | |||||||||  ||| |||||||||||||| |||||    
T  36673012 ctaaaaccaaaacaagacatatttgcagagaccaaaaccatattttatcctat 36672960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 47114754 - 47114806
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||| ||||| |||||||||||||| ||| ||||| |||||||| |||||    
T  47114754 ctaaaactaaaacgaaatatatttgcaaggaccaaaactatattttagcctat 47114806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 54767220 - 54767168
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    |||||||||||| ||||||||||| ||  || ||||||||||||||| |||||    
T  54767220 ctaaaaccaaaagaaaatatattttcagagaataaaaccatattttagcctat 54767168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 3276171 - 3276286
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||| ||||  |||| |||| || ||||||||||||  ||||||||||| ||||||||||| | |||||| ||||  ||||||||  |||||||||    
T  3276171 gactatttctctaataaatgggttcagacatcatgtgtcacgtgtgcaaatcatcacaaaagtggagccagagaccaaaaccaaaatgaggcatatttgt 3276270  T
Q  162 aga-accaaaaactac 176  Q
    ||| ||||||||||||    
T  3276271 agagaccaaaaactac 3276286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 27764994 - 27765089
Alignment:
Q  65 tatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||||||  ||||  |||||| ||||||||||||| ||||||||||| ||||||||||| | |||||| ||||  ||||| || |||||||||    
T  27764994 tatttttctaataaatgagtttagccatcatgtgtcatgtgtgcaaatcatcacaaaagtggggccagagaccaaaaccaaaacgagacatatttg 27765089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 25121315 - 25121412
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||  |||||||||||||||  ||||||||||| ||||||||||| | ||| || |||| ||||||||| |||||||||    
T  25121315 gactatttttctaataaatgggtc-agtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggggccagggaccaaaatcaaaatgagacatatttg 25121412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 1214891 - 1214815
Alignment:
Q  49 aaatattttgtatg-actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagt 124  Q
    |||||||||||| | ||||||||||||  |||| |||| |||||||||||||||  ||||||||||| |||||||||    
T  1214891 aaatattttgtagggactatttttctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagt 1214815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 23628979 - 23629089
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||| ||||||| |||||||||||   |||||| ||||   ||||||| ||||||||||    
T  23628979 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtacaaatcatcacaaaagtgggaccagagaccaaaactaaaatgagacatatttgt 23629078  T
Q  162 a-gaaccaaaa 171  Q
    | |||||||||    
T  23629079 aggaaccaaaa 23629089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 24901421 - 24901323
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| ||| |||||||||||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  24901421 gactatttctctaataaatgggttcagttatcatgtgtcacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 24901323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 8169970 - 8170070
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||||||||  ||||  ||| |||||||||||||||  ||||||||||| ||| ||||||| | ||| || ||||  |||||||| ||||||||||    
T  8169970 gactatttttctaataaatgagttcagtcatcatgtgtcacgtgtgcaaatcatcac-aaagtggggccagggaccaaaaccaaaatgagacatatttgt 8170068  T
Q  162 ag 163  Q
    ||    
T  8170069 ag 8170070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 15443147 - 15443078
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtca 131  Q
    ||||||||||| |  ||||||||| | |||||||||||||| |||||| |||| ||||||||||| ||||    
T  15443147 gactatttttcaaataaataggttcaatcatcatgtgtcatgtgtgcagatcaacacaaaagtggggtca 15443078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 7324143 - 7324195
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| ||  |||||||||  ||||||||||||||||||||||||    
T  7324143 ctaaaaccaaaacgaagcatatttgcagggactaaaaccatattttaacctat 7324195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 12176594 - 12176645
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaaccta 248  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||||||||    
T  12176594 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttaaccta 12176645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 6468359 - 6468313
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||||||  |||||||||  ||||||||||||||||||    
T  6468359 ctaaaaccaaaacaaagcatatttgcagggactaaaaccatatttta 6468313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 9896588 - 9896634
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||||    
T  9896588 ctaaaaccaaaacaagacatatttgcagggactaaaaccatatttta 9896634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 10091085 - 10091039
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| ||| |||||||||  ||||||||||||||||||    
T  10091085 ctaaaaccaaaacgaaacatatttgcagggactaaaaccatatttta 10091039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 12299001 - 12298903
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| | |||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  ||||| || |||||||||    
T  12299001 gactatttttctaataaatgggttcaatcatcatgtgccacgtgtgcaaatcatcacaaaagtggggccagggaccaaaaccaaaacgagacatatttg 12298903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 14428901 - 14428947
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| ||  |||||||||| ||||||||||||||||||    
T  14428901 ctaaaaccaaaacgaagcatatttgcaaggactaaaaccatatttta 14428947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 19320950 - 19320852
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  19320950 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 19320852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 23628847 - 23628801
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| |||||||||||||  ||| ||||||||||||||    
T  23628847 ctaaaaccaaaacgaaatatatttgcagggaccaaaaccatatttta 23628801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 25137176 - 25137078
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| ||||||| ||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  25137176 gactatttctctaataaatgggtttagccatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 25137078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 31198798 - 31198700
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  31198798 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 31198700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 34990266 - 34990316
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacct 247  Q
    ||||||||||||| ||  |||||||||  ||||||||||||||||||||||    
T  34990266 ctaaaaccaaaacgaagcatatttgcagggactaaaaccatattttaacct 34990316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 318048 - 318100
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| ||| |||||||||  || ||||||||||||||| |||||    
T  318048 ctaaaaccaaaacgaaacatatttgcagggattaaaaccatattttagcctat 318100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 3414569 - 3414633
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| |||| |||||||||||| || |||||||||| | |||||||||||    
T  3414569 gactatttctctaataaatgggttcagtcatcatgtgccacatgtgcaaataatcacaaaagtgg 3414633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 10910781 - 10910845
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| ||||||||||||||||| ||  |||| |||||| |||||||||||    
T  10910781 gactatttctctaataaatgggtttagtcatcatgtgccacgtgtgtaaatcatcacaaaagtgg 10910845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 12757754 - 12757818
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  | || |||| ||||||||||||||| ||||||||  || |||||||||||    
T  12757754 gactatttttctaatagatgggttcagtcatcatgtgtcacatgtgcaacccatcacaaaagtgg 12757818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 2356065 - 2355970
Alignment:
Q  65 tatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    ||||||||||  |||| |||| |||||||||||||||| ||||||||||| ||||||||||  |||||  | ||||  ||||| ||||||||||||    
T  2356065 tatttttctaataaatgggttcagtcatcatgtgtcatgtgtgcaaatcatcacaaaagtgaggtcaggaaccaaaaccaaaacgaaacatatttg 2355970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 14848008 - 14847910
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||||  |||| |||| | ||||||||||||| |||||||||||| ||||||||||| |  || || |||| |||||| || |||||||||    
T  14848008 gactatttttctaataaatgggttcactcatcatgtgtcacatgtgcaaatcatcacaaaagtggggctagggaccaaaatcaaaacgagacatatttg 14847910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 16010775 - 16010662
Alignment:
Q  63 actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgta 162  Q
    |||||||||||| ||||| | || | |||||||| ||||  ||| ||||||| ||||||||| | |||||||| |||| |||||| || ||||||||| |    
T  16010775 actatttttctacaaaatggattcaatcatcatgagtcacgtgtacaaatcatcacaaaagttgggtcagagaccaaaatcaaaacgagacatatttgca 16010676  T
Q  163 gaaccaaaaactac 176  Q
    | || |||||||||    
T  16010675 ggactaaaaactac 16010662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 2811624 - 2811536
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatga 150  Q
    |||||||| |||||||||| ||||||||||||||||| ||  | | ||||||| ||||||||||| ||||  |||||||  ||||||||    
T  2811624 gactatttatctataaaatgggtttagtcatcatgtgccacgtatacaaatcatcacaaaagtggggtcatggatcaaaaccaaaatga 2811536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 23939727 - 23939660
Alignment:
Q  65 tatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    ||||||||||  ||||  ||| ||||||||||||||| |||||||||||| ||||||||||| |||||    
T  23939727 tatttttctaataaatgagttcagtcatcatgtgtcacatgtgcaaatcatcacaaaagtggggtcag 23939660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 7326269 - 7326171
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  |||||||| |||||||||    
T  7326269 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgagacatatttg 7326171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 8298770 - 8298672
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||| || ||||  ||||||||  ||||||||    
T  8298770 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagtcagggaccaaaaccaaaatgaggcatatttg 8298672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 13232381 - 13232283
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||||||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  13232381 gactatttctctaataaatgggttcagtcatcatgtgtcacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 13232283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 23360553 - 23360491
Alignment:
Q  63 actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtg 125  Q
    |||||||||||| |||||||||| | ||||||| || || |||||||||||| ||||||||||    
T  23360553 actatttttctacaaaataggttcaatcatcatatgccacatgtgcaaatcatcacaaaagtg 23360491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 28497437 - 28497367
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| |||||    
T  28497437 gactatttttctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggggtcag 28497367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 35115516 - 35115586
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||||||||  |||| |||| |||||||||||||||  | ||||||||| ||||||||||| |||||    
T  35115516 gactatttttctaataaatgggttcagtcatcatgtgtcacgtatgcaaatcatcacaaaagtggggtcag 35115586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 40844486 - 40844536
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacct 247  Q
    ||||||||||||| | |||||||||||  ||||||||||||||||||||||    
T  40844486 ctaaaaccaaaacgagatatatttgcagggactaaaaccatattttaacct 40844536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 13155044 - 13154971
Alignment:
Q  87 agtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||| ||  |||||||||||  |||||||||| ||||| || |||| |||||| ||||||||||||    
T  13155044 agtcatcatgtgccacgtgtgcaaatcaatacaaaagtggggtcagggaccaaaatcaaaacgaaacatatttg 13154971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 131
Target Start/End: Original strand, 15931086 - 15931155
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtca 131  Q
    |||||||||||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| ||||    
T  15931086 gactatttttctaataaatgggttcagtcatcatgtgacacgtgtgcaaatcatcacaaaagtggggtca 15931155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 17073985 - 17074086
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||||||||  ||||  ||| |||||||||||||||  ||||||||||| || |||||||| ||||| ||  ||| |||||| ||  |||||||||    
T  17073985 gactatttttctaataaatgagttcagtcatcatgtgtcacgtgtgcaaatcatcataaaagtggagtcagggactaaaatcaaaacgaggcatatttgt 17074084  T
Q  162 ag 163  Q
    ||    
T  17074085 ag 17074086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 17574285 - 17574184
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||||||||  ||||  ||| |||||||||||||||  ||||||||||| || |||||||| ||||| ||  ||| |||||| ||  |||||||||    
T  17574285 gactatttttctaataaatgagttcagtcatcatgtgtcacgtgtgcaaatcatcataaaagtggagtcagggactaaaatcaaaacgaggcatatttgt 17574186  T
Q  162 ag 163  Q
    ||    
T  17574185 ag 17574184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 4473887 - 4473823
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  |||| ||||||||||||||||| ||  ||||||||||| |||||||||||    
T  4473887 gactatttctctaataaatgggtttagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 4473823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 4621171 - 4621283
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttgt 161  Q
    |||||||| ||||  |||| |||| ||||||||||||| |  ||||||||||| ||||||||||| |  || || |||| |||||||||  ||||||||     
T  4621171 gactatttctctaataaatgggttcagtcatcatgtgtgacgtgtgcaaatcatcacaaaagtggagcaagggaccaaaatcaaaatgaggcatatttgc 4621270  T
Q  162 a-gaaccaaaaac 173  Q
    | |||||||||||    
T  4621271 aggaaccaaaaac 4621283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 9175189 - 9175253
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    ||||||||||| |  |||| |||| |||||||||||| ||| ||||||||||| |||||||||||    
T  9175189 gactatttttcaaataaatgggttcagtcatcatgtgccatgtgtgcaaatcatcacaaaagtgg 9175253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 10873097 - 10873209
Alignment:
Q  62 gactatttttcta-taaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| |||| |||||| |||| |||||||||||| ||  ||||||||||| ||||||| ||| | ||| || ||||  ||||||||  ||||||||    
T  10873097 gactatttctctaataaaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaattggagccagggaccaaaaccaaaatgaggcatatttg 10873196  T
Q  161 tagaaccaaaaac 173  Q
     || |||||||||    
T  10873197 caggaccaaaaac 10873209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 24090302 - 24090238
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||| ||||  |||||||||||||| ||||||| |||| |||||||||||    
T  24090302 gactatttttctaataaatgggttcggtcatcatgtgtcacatgtgcatatcatcacaaaagtgg 24090238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 25600414 - 25600350
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||| ||||  ||||  ||| |||||||||||||||| ||||||||||| |||||||||||    
T  25600414 gactatttctctaataaatgagttcagtcatcatgtgtcatgtgtgcaaatcatcacaaaagtgg 25600350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 30969575 - 30969639
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||||||||||  |||  |||| | |||||||||||||||||||||||||| || ||||||||    
T  30969575 gactatttttctaataaacgggttcaatcatcatgtgtcatatgtgcaaatcatcataaaagtgg 30969639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 42429937 - 42429997
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaa 122  Q
    |||||||||||||| |||| |||| |||||||||||| ||  ||||||||||| |||||||    
T  42429937 gactatttttctattaaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaa 42429997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 36044608 - 36044671
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtg 125  Q
    |||||||||| ||  ||||| ||| ||||||||||| ||| |||||||||||| ||||||||||    
T  36044608 gactatttttgtaataaataagttcagtcatcatgtatcacatgtgcaaatcatcacaaaagtg 36044671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 2728434 - 2728512
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| ||||| || ||||  |||||||| |||||||||    
T  2728434 ggttaagtcatcatgtgacacgtgtgcaaattatcacaaaagtggagtcagggaccaaaaccaaaatgagacatatttg 2728512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 7420413 - 7420315
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||| |||| |||||||||||| ||  ||||||||||| ||||||||||| | ||| || ||||  ||||||||  ||||||||    
T  7420413 gactatttctctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtggagccagggaccaaaaccaaaatgaggcatatttg 7420315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 15719705 - 15719659
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||| | |||||||||||  ||||||||||||||||||    
T  15719705 ctaaaaccaaaacgagatatatttgcagggactaaaaccatatttta 15719659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 28346576 - 28346673
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||| ||||  |||||| || |||||||||||| || |||||||||| | ||||||||||| | ||| || ||||  |||||||| |||||||||    
T  28346576 gactatttctctaataaatag-ttaagtcatcatgtgacacatgtgcaaattatcacaaaagtggagccagggaccaaaaccaaaatgagacatatttg 28346673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 29992133 - 29992211
Alignment:
Q  77 aaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacat 155  Q
    |||| |||| |||||||||||||||  |||| |||||| ||||||||||| ||||| || ||||  |||||||| ||||    
T  29992133 aaatgggttcagtcatcatgtgtcacgtgtgtaaatcatcacaaaagtggggtcagggaccaaaaccaaaatgagacat 29992211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 32726108 - 32726186
Alignment:
Q  82 ggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||| |||||||||||| ||  ||||||||| | ||||||||||| | ||| |||||||  |||||||| |||||||||    
T  32726108 ggttaagtcatcatgtgacacgtgtgcaaattatcacaaaagtggagccagggatcaaaaccaaaatgagacatatttg 32726186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 9832263 - 9832218
Alignment:
Q  198 taaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    |||||||||||||||| |||||||||| ||| ||||||||| ||||    
T  9832263 taaaaccaaaacaaaacatatttgcaaggaccaaaaccataattta 9832218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 24814888 - 24814795
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacat 155  Q
    |||||||||||||| |||| | || ||||||||||||  |  |||||||||||  |||||||||| ||||| || ||||  |||||||| ||||    
T  24814888 gactatttttctattaaatggattcagtcatcatgtgctacgtgtgcaaatcataacaaaagtggggtcagggaccaaaaccaaaatgagacat 24814795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 25702711 - 25702784
Alignment:
Q  87 agtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatatttg 160  Q
    |||||||||||| ||  ||||||||| | ||||||||||| | | ||||||||| | ||||||| |||||||||    
T  25702711 agtcatcatgtgccacgtgtgcaaattatcacaaaagtggagccggagatcaaaattaaaatgagacatatttg 25702784  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 8094528 - 8094476
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  8094528 ctaaaaccaaaacgagacatatttgcagagactaaaaccatattttagcctat 8094476  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 9832376 - 9832472
Alignment:
Q  63 actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    ||||||||||||  |||| |||  | |||||||||| || ||||| |||||| ||||||| |||||| |  |||||||  |||||||| ||||||||    
T  9832376 actatttttctaataaatgggtacattcatcatgtgccacatgtgtaaatcatcacaaaaatggtgttaaggatcaaaaacaaaatgagacatattt 9832472  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 18549250 - 18549198
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| ||  |||||||||  |||||||||||||||||| |||||    
T  18549250 ctaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagcctat 18549198  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 19494168 - 19494116
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  19494168 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctat 19494116  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 29158403 - 29158351
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  29158403 ctaaaaccaaaacgagacatatttgcagggactaaaaccatattttagcctat 29158351  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 32195457 - 32195389
Alignment:
Q  67 tttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagaga 135  Q
    |||||||| |||||||||| | |||||||||||||  | |||| |||| || |||||||| ||||||||    
T  32195457 tttttctacaaaataggttcaatcatcatgtgtcacgtatgcatatcatcataaaagtggggtcagaga 32195389  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 33636371 - 33636319
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| ||  |||||||||  |||||||||||||||||| |||||    
T  33636371 ctaaaaccaaaacgaagcatatttgcagggactaaaaccatattttagcctat 33636319  T

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Target: scaffold0472 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 7102 - 7031
Alignment:
Q  88 gtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaattcaaaatgaaacatattt 159  Q
    |||||||||||||| |||||||||||| ||||||||||| | |||||| ||||   ||||||| ||||||||    
T  7102 gtcatcatgtgtcacatgtgcaaatcatcacaaaagtggggccagagaccaaaactaaaatgagacatattt 7031  T

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Target: scaffold0578 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 5014 - 5071
Alignment:
Q  190 acagaatctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacct 247  Q
    |||||| ||||||||||||| | |||||||||||  ||| ||||||||||||||||||    
T  5014 acagaaactaaaaccaaaacgagatatatttgcagagaccaaaaccatattttaacct 5071  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 24421 - 24369
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | ||||||||| ||||||||||||||||||| |||||    
T  24421 ctaaaaccaaaacgagacatatttgcagtgactaaaaccatattttagcctat 24369  T

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Target: scaffold0684 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 2477 - 2414
Alignment:
Q  63 actatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    ||||||||||||  |||| |||| |||||||||||| ||  ||||||||||| |||||||||||    
T  2477 actatttttctaataaatgggttcagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 2414  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 5659 - 5705
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatatttta 243  Q
    ||||||||||||||| | |||||||||  ||||||||||||||||||    
T  5659 ctaaaaccaaaacaagacatatttgcagggactaaaaccatatttta 5705  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 48048 - 47978
Alignment:
Q  62 gactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcag 132  Q
    |||||||||||||  |||| |||| | |||||| ||||||  ||||||||||| ||||||||||| |||||    
T  48048 gactatttttctaataaatgggttcaatcatcaagtgtcaagtgtgcaaatcatcacaaaagtggggtcag 47978  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 34893 - 34966
Alignment:
Q  53 attttgtatgactatttttctataaaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||||| | |||||||| ||||  |||| |||| ||||||||||||||| || ||||||||| || ||||||||    
T  34893 attttgcaggactatttatctaataaatgggttcagtcatcatgtgtcacatatgcaaatcatcataaaagtgg 34966  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 82509 - 82460
Alignment:
Q  77 aaataggtttagtcatcatgtgtcatatgtgcaaatcaccacaaaagtgg 126  Q
    |||| ||||||||||||||||| ||  ||||||||||| |||||||||||    
T  82509 aaattggtttagtcatcatgtgccacgtgtgcaaatcatcacaaaagtgg 82460  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 17282 - 17231
Alignment:
Q  88 gtcatcatgtgtcatatgtgcaaatcaccacaaaagtggtgtcagagatcaaa 140  Q
    |||||||||||||| || ||||||||| ||||||||||| | |||||||||||    
T  17282 gtcatcatgtgtcacatttgcaaatcatcacaaaagtgg-gccagagatcaaa 17231  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 10466 - 10518
Alignment:
Q  197 ctaaaaccaaaacaaaatatatttgcaatgactaaaaccatattttaacctat 249  Q
    ||||||||||||| | | |||||||||  |||||||||||||||||| |||||    
T  10466 ctaaaaccaaaaccagacatatttgcagggactaaaaccatattttagcctat 10518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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