View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11901_low_40 (Length: 277)

Name: NF11901_low_40
Description: NF11901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11901_low_40
NF11901_low_40
[»] chr4 (44 HSPs)
chr4 (1-50)||(3770427-3770477)
chr4 (1-52)||(34363085-34363137)
chr4 (5-52)||(35083852-35083900)
chr4 (1-50)||(48278183-48278233)
chr4 (1-46)||(55586616-55586662)
chr4 (1-52)||(8483127-8483179)
chr4 (1-52)||(17262352-17262404)
chr4 (1-51)||(232958-233009)
chr4 (1-47)||(54216224-54216271)
chr4 (1-54)||(104192-104246)
chr4 (1-46)||(5344270-5344316)
chr4 (1-46)||(7644457-7644503)
chr4 (1-54)||(7705582-7705636)
chr4 (1-46)||(10046203-10046249)
chr4 (1-46)||(11530027-11530073)
chr4 (1-46)||(12640820-12640866)
chr4 (1-46)||(17262090-17262136)
chr4 (1-46)||(18988179-18988225)
chr4 (1-50)||(27247126-27247176)
chr4 (1-46)||(31250736-31250782)
chr4 (1-46)||(34362820-34362866)
chr4 (1-46)||(39136298-39136344)
chr4 (1-50)||(43821715-43821765)
chr4 (1-46)||(44921877-44921923)
chr4 (1-46)||(45289767-45289813)
chr4 (1-46)||(47853976-47854022)
chr4 (1-49)||(8891920-8891969)
chr4 (1-49)||(20466382-20466431)
chr4 (1-45)||(22159830-22159875)
chr4 (1-49)||(35364193-35364242)
chr4 (1-46)||(54606888-54606933)
chr4 (1-52)||(7666465-7666517)
chr4 (1-48)||(13019271-13019319)
chr4 (1-52)||(14578707-14578759)
chr4 (5-52)||(17554317-17554365)
chr4 (1-44)||(26171507-26171551)
chr4 (1-44)||(37432485-37432529)
chr4 (1-44)||(41707720-41707764)
chr4 (1-52)||(42672335-42672387)
chr4 (1-56)||(48277906-48277962)
chr4 (5-52)||(49869690-49869738)
chr4 (1-44)||(50513309-50513353)
chr4 (1-52)||(52311069-52311121)
chr4 (1-52)||(56296611-56296663)
[»] chr8 (39 HSPs)
chr8 (1-52)||(4107115-4107167)
chr8 (1-50)||(6641865-6641915)
chr8 (1-50)||(23233777-23233827)
chr8 (1-53)||(29233772-29233825)
chr8 (1-49)||(30358840-30358889)
chr8 (1-48)||(4167467-4167515)
chr8 (1-52)||(20095954-20096006)
chr8 (1-52)||(39515552-39515604)
chr8 (1-51)||(20813731-20813782)
chr8 (1-43)||(33881354-33881397)
chr8 (1-46)||(414922-414968)
chr8 (1-46)||(2321516-2321562)
chr8 (1-46)||(6014419-6014465)
chr8 (1-46)||(7013617-7013663)
chr8 (1-50)||(7151109-7151159)
chr8 (1-46)||(15187928-15187974)
chr8 (1-46)||(17943358-17943404)
chr8 (1-46)||(20819752-20819798)
chr8 (1-46)||(23234047-23234093)
chr8 (1-46)||(31191737-31191783)
chr8 (1-46)||(37953374-37953420)
chr8 (1-46)||(41554607-41554653)
chr8 (1-46)||(42866360-42866406)
chr8 (1-46)||(42906372-42906418)
chr8 (1-46)||(45106435-45106481)
chr8 (1-56)||(414656-414713)
chr8 (1-45)||(6335333-6335378)
chr8 (5-46)||(29197299-29197340)
chr8 (5-46)||(38701931-38701972)
chr8 (1-56)||(44886171-44886228)
chr8 (1-52)||(5734452-5734504)
chr8 (3-46)||(6745263-6745307)
chr8 (1-52)||(14024307-14024359)
chr8 (1-52)||(16531242-16531294)
chr8 (1-48)||(20283942-20283990)
chr8 (1-48)||(21070570-21070618)
chr8 (1-52)||(35735498-35735549)
chr8 (1-48)||(40918641-40918689)
chr8 (1-52)||(45208970-45209022)
[»] chr7 (34 HSPs)
chr7 (1-52)||(10319160-10319212)
chr7 (1-51)||(30699291-30699342)
chr7 (1-51)||(38445673-38445724)
chr7 (1-50)||(38053415-38053465)
chr7 (1-49)||(23910122-23910171)
chr7 (1-48)||(388168-388216)
chr7 (1-52)||(3931640-3931692)
chr7 (1-48)||(16537075-16537123)
chr7 (1-48)||(16628539-16628587)
chr7 (1-52)||(25986919-25986971)
chr7 (1-52)||(35121680-35121732)
chr7 (1-52)||(37047933-37047985)
chr7 (1-52)||(39976723-39976775)
chr7 (1-62)||(21917517-21917580)
chr7 (1-51)||(38879156-38879207)
chr7 (1-46)||(930975-931021)
chr7 (1-46)||(3925793-3925839)
chr7 (1-46)||(18852495-18852541)
chr7 (1-46)||(19194428-19194474)
chr7 (1-46)||(19778521-19778567)
chr7 (1-46)||(23909895-23909941)
chr7 (1-46)||(26612610-26612656)
chr7 (1-46)||(34533480-34533526)
chr7 (1-50)||(35711925-35711975)
chr7 (1-46)||(37452316-37452362)
chr7 (1-46)||(43408471-43408517)
chr7 (5-46)||(17802179-17802220)
chr7 (1-49)||(19233586-19233635)
chr7 (1-49)||(43408221-43408270)
chr7 (5-46)||(45863023-45863064)
chr7 (1-52)||(4061255-4061307)
chr7 (1-52)||(10715832-10715884)
chr7 (1-48)||(11275432-11275480)
chr7 (1-52)||(45231516-45231568)
[»] chr6 (25 HSPs)
chr6 (1-52)||(10894137-10894189)
chr6 (1-52)||(28930731-28930783)
chr6 (1-50)||(1814972-1815022)
chr6 (1-46)||(5606564-5606610)
chr6 (1-50)||(10977654-10977704)
chr6 (1-56)||(11445965-11446022)
chr6 (1-49)||(15149724-15149773)
chr6 (1-49)||(18683009-18683058)
chr6 (1-45)||(28930465-28930510)
chr6 (1-52)||(3535046-3535098)
chr6 (1-56)||(13042398-13042454)
chr6 (1-52)||(31833260-31833312)
chr6 (1-47)||(11746246-11746293)
chr6 (1-46)||(2100380-2100426)
chr6 (1-46)||(2565078-2565124)
chr6 (1-46)||(2565346-2565392)
chr6 (1-61)||(6261365-6261427)
chr6 (1-46)||(7391744-7391790)
chr6 (1-46)||(11322292-11322338)
chr6 (1-49)||(23883086-23883135)
chr6 (1-44)||(3195718-3195762)
chr6 (6-53)||(6324195-6324243)
chr6 (1-52)||(22279493-22279545)
chr6 (1-52)||(30965685-30965737)
chr6 (1-52)||(34705643-34705695)
[»] chr5 (27 HSPs)
chr5 (1-52)||(26323642-26323694)
chr5 (1-45)||(22773852-22773897)
chr5 (1-49)||(34169055-34169104)
chr5 (1-48)||(8339957-8340005)
chr5 (1-52)||(15738068-15738120)
chr5 (1-52)||(23263412-23263464)
chr5 (1-43)||(16597044-16597087)
chr5 (1-46)||(2710604-2710650)
chr5 (1-46)||(3020861-3020907)
chr5 (1-46)||(4096718-4096764)
chr5 (1-46)||(13960957-13961003)
chr5 (1-54)||(15526696-15526750)
chr5 (1-46)||(21583323-21583369)
chr5 (1-50)||(21583590-21583640)
chr5 (1-46)||(23263145-23263191)
chr5 (1-46)||(31456128-31456174)
chr5 (1-46)||(34082368-34082414)
chr5 (1-46)||(34606637-34606683)
chr5 (1-46)||(34734340-34734386)
chr5 (1-46)||(35306969-35307015)
chr5 (1-46)||(40687666-40687712)
chr5 (1-50)||(42739854-42739904)
chr5 (1-52)||(8755007-8755059)
chr5 (1-52)||(9071962-9072014)
chr5 (7-50)||(12610547-12610591)
chr5 (1-52)||(14647955-14648007)
chr5 (1-44)||(40767890-40767934)
[»] chr3 (47 HSPs)
chr3 (1-52)||(45760500-45760552)
chr3 (1-51)||(2118981-2119032)
chr3 (1-51)||(29168995-29169046)
chr3 (1-51)||(41282114-41282165)
chr3 (1-46)||(40082212-40082258)
chr3 (1-46)||(47943459-47943505)
chr3 (1-46)||(49997923-49997969)
chr3 (1-49)||(17483825-17483874)
chr3 (1-52)||(25053851-25053903)
chr3 (1-52)||(27857402-27857454)
chr3 (1-52)||(32508186-32508238)
chr3 (1-52)||(38511653-38511705)
chr3 (1-48)||(43678969-43679017)
chr3 (5-52)||(51213301-51213349)
chr3 (1-52)||(51842795-51842847)
chr3 (1-52)||(53192380-53192432)
chr3 (1-51)||(47530334-47530385)
chr3 (1-54)||(5154048-5154102)
chr3 (1-46)||(9153477-9153523)
chr3 (1-46)||(19914476-19914522)
chr3 (1-46)||(21841978-21842024)
chr3 (1-46)||(25126265-25126311)
chr3 (1-46)||(31117620-31117666)
chr3 (1-46)||(32205114-32205160)
chr3 (1-46)||(33576676-33576722)
chr3 (1-46)||(38511924-38511970)
chr3 (1-46)||(41223513-41223559)
chr3 (1-46)||(42230033-42230079)
chr3 (1-46)||(47943727-47943773)
chr3 (1-46)||(51214426-51214472)
chr3 (1-46)||(51336890-51336936)
chr3 (1-46)||(53531806-53531852)
chr3 (1-53)||(14015410-14015463)
chr3 (1-49)||(17483558-17483607)
chr3 (1-49)||(27984136-27984185)
chr3 (1-56)||(44184238-44184295)
chr3 (1-45)||(49859718-49859763)
chr3 (5-46)||(51187959-51188000)
chr3 (1-45)||(52613589-52613634)
chr3 (1-48)||(787097-787145)
chr3 (1-48)||(3212419-3212467)
chr3 (1-44)||(8727915-8727959)
chr3 (1-44)||(9079802-9079846)
chr3 (1-44)||(27719953-27719997)
chr3 (1-52)||(36441476-36441528)
chr3 (1-44)||(39905730-39905774)
chr3 (1-52)||(44895915-44895967)
[»] chr1 (51 HSPs)
chr1 (1-52)||(6491683-6491735)
chr1 (1-52)||(13791842-13791894)
chr1 (1-48)||(40815133-40815181)
chr1 (1-52)||(52149781-52149833)
chr1 (1-51)||(3383959-3384010)
chr1 (1-46)||(6491416-6491462)
chr1 (1-49)||(42589417-42589466)
chr1 (1-49)||(47764088-47764137)
chr1 (1-48)||(6183249-6183297)
chr1 (1-48)||(18589847-18589895)
chr1 (1-48)||(22075618-22075666)
chr1 (1-52)||(23341958-23342010)
chr1 (1-52)||(28503403-28503455)
chr1 (1-44)||(29704619-29704663)
chr1 (1-52)||(32341489-32341541)
chr1 (1-48)||(38622670-38622718)
chr1 (1-52)||(46320670-46320722)
chr1 (1-51)||(2371444-2371495)
chr1 (1-51)||(6182977-6183028)
chr1 (1-51)||(9058161-9058212)
chr1 (1-47)||(37029195-37029242)
chr1 (1-51)||(43677369-43677419)
chr1 (1-54)||(3263992-3264046)
chr1 (1-46)||(8770463-8770509)
chr1 (1-46)||(11018669-11018715)
chr1 (1-46)||(16491242-16491288)
chr1 (1-46)||(22204305-22204351)
chr1 (1-46)||(22204573-22204619)
chr1 (1-58)||(23793049-23793107)
chr1 (1-46)||(32341759-32341805)
chr1 (1-46)||(39427411-39427457)
chr1 (1-50)||(42407152-42407202)
chr1 (1-46)||(45884948-45884994)
chr1 (1-46)||(46320943-46320989)
chr1 (1-46)||(52143432-52143478)
chr1 (5-50)||(6912213-6912258)
chr1 (1-49)||(12071912-12071961)
chr1 (1-45)||(20224079-20224124)
chr1 (1-53)||(26434957-26435010)
chr1 (5-46)||(26932583-26932624)
chr1 (1-45)||(41585552-41585597)
chr1 (7-52)||(48332991-48333036)
chr1 (1-52)||(11204501-11204553)
chr1 (1-52)||(20471408-20471460)
chr1 (1-52)||(20560077-20560129)
chr1 (1-44)||(21727882-21727926)
chr1 (1-52)||(27855557-27855609)
chr1 (1-48)||(41585283-41585331)
chr1 (1-52)||(43670581-43670633)
chr1 (1-52)||(43914847-43914899)
chr1 (1-52)||(45885216-45885268)
[»] chr2 (21 HSPs)
chr2 (1-51)||(39642724-39642775)
chr2 (1-54)||(21843447-21843501)
chr2 (1-50)||(22194715-22194765)
chr2 (1-52)||(24895178-24895230)
chr2 (1-51)||(21552808-21552859)
chr2 (1-47)||(38731278-38731325)
chr2 (1-43)||(41829732-41829775)
chr2 (1-46)||(24205294-24205340)
chr2 (1-46)||(31784252-31784298)
chr2 (1-54)||(40493638-40493692)
chr2 (1-46)||(40493912-40493958)
chr2 (1-46)||(2937056-2937101)
chr2 (1-44)||(1375428-1375472)
chr2 (1-48)||(1466808-1466856)
chr2 (1-48)||(17798846-17798894)
chr2 (1-48)||(21552539-21552587)
chr2 (1-52)||(22093229-22093281)
chr2 (1-52)||(24858143-24858195)
chr2 (1-52)||(34850924-34850976)
chr2 (1-44)||(36566605-36566649)
chr2 (1-48)||(39431436-39431484)
[»] scaffold0272 (2 HSPs)
scaffold0272 (1-46)||(20868-20914)
scaffold0272 (1-52)||(10828-10880)
[»] scaffold0236 (1 HSPs)
scaffold0236 (5-52)||(23119-23167)
[»] scaffold0182 (2 HSPs)
scaffold0182 (1-48)||(12045-12093)
scaffold0182 (1-46)||(20595-20641)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-52)||(75342-75394)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-46)||(79254-79300)
[»] scaffold0283 (1 HSPs)
scaffold0283 (1-56)||(1173-1230)
[»] scaffold0213 (1 HSPs)
scaffold0213 (1-49)||(21314-21363)
[»] scaffold0922 (1 HSPs)
scaffold0922 (1-52)||(100-152)
[»] scaffold0121 (2 HSPs)
scaffold0121 (1-48)||(22293-22341)
scaffold0121 (1-48)||(22543-22591)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-52)||(238616-238668)


Alignment Details
Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3770427 - 3770477
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  3770427 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagccaaaa 3770477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34363085 - 34363137
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  34363085 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 34363137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 35083852 - 35083900
Alignment:
Q  5 cgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  35083852 cgcaacttttgaaaagatagaggtccaaaagtgcaattaagccaaaaaa 35083900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48278183 - 48278233
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  48278183 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagccaaaa 48278233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 55586662 - 55586616
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  55586662 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagcc 55586616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8483127 - 8483179
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||| |||||    
T  8483127 taaccgcaacttttgaaaaaatagaggtccaaaagtgcaattaagcctaaaaa 8483179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17262352 - 17262404
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  17262352 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 17262404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 232958 - 233009
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||| ||||    
T  232958 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctaaaa 233009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 54216224 - 54216271
Alignment:
Q  1 taaccgcaacttttgaaaagatagatg-tccaaagtgcaattaagcca 47  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||    
T  54216224 taaccgcaacttttgaaaagatagaggttcaaaagtgcaattaagcca 54216271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 104246 - 104192
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaata 54  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||||    
T  104246 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaata 104192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5344316 - 5344270
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  5344316 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 5344270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7644503 - 7644457
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  7644503 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 7644457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7705636 - 7705582
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaata 54  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||||    
T  7705636 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaata 7705582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10046203 - 10046249
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  10046203 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 10046249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11530027 - 11530073
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  11530027 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 11530073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12640866 - 12640820
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  12640866 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 12640820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17262136 - 17262090
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaa-agtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||    
T  17262136 taaccgcaacttttgaaaagatagtggtccaagagtgcaattaagcc 17262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18988225 - 18988179
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  18988225 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 18988179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27247126 - 27247176
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  27247126 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaa 27247176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31250736 - 31250782
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  31250736 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 31250782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34362866 - 34362820
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  34362866 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 34362820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39136344 - 39136298
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  39136344 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 39136298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43821765 - 43821715
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  43821765 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaa 43821715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44921877 - 44921923
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  44921877 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 44921923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45289767 - 45289813
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  45289767 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 45289813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47854022 - 47853976
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  47854022 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 47853976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8891920 - 8891969
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||    
T  8891920 taaccacaacttttgaaaagataggggtcctaaagtgcaattaagccaaa 8891969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20466431 - 20466382
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  20466431 taaccgcaacttttgaaaagatagggatccaaaagtgcaattaagccaaa 20466382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22159875 - 22159830
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagc 45  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  22159875 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagc 22159830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35364242 - 35364193
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    |||||||||||||| |||||||||  |||| |||||||||||||||||||    
T  35364242 taaccgcaacttttaaaaagataggggtccaaaagtgcaattaagccaaa 35364193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 54606933 - 54606888
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  ||||||| | ||||||||||    
T  54606933 taaccgcaacttttgaaaagataggggtccaaaatacaattaagcc 54606888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7666465 - 7666517
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||| ||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  7666465 taaccacaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 7666517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13019319 - 13019271
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  13019319 taaccacaacttttgaaaagataggggtccaaaagtgcaattaagccaa 13019271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 14578707 - 14578759
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||| |||||    
T  14578707 taaccacaacttttgaaaagataggggtccaaaagtgcaattaagcctaaaaa 14578759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 17554317 - 17554365
Alignment:
Q  5 cgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||  |||| |||||||||||||||| |||||    
T  17554317 cgcaacttttgaaaagataggggtccaaaagtgcaattaagcccaaaaa 17554365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26171507 - 26171551
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    |||||| |||||||||||||||||| |||| ||||||||||||||    
T  26171507 taaccgtaacttttgaaaagatagaggtccaaaagtgcaattaag 26171551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37432485 - 37432529
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  37432485 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 37432529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41707764 - 41707720
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  41707764 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 41707720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42672335 - 42672387
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||    
T  42672335 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaa 42672387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48277962 - 48277906
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaatatt 56  Q
    ||||| ||||||||||||||||||  |||| ||| |||||||||||||||| |||||    
T  48277962 taaccacaacttttgaaaagataggggtccaaaaatgcaattaagccaaaagatatt 48277906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 49869690 - 49869738
Alignment:
Q  5 cgcaacttttgaaaagata-gatgtccaaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||| || ||| |||||||||||||||| |||||    
T  49869690 cgcaacttttgaaaagataggaggtcaaaagtgcaattaagcctaaaaa 49869738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50513309 - 50513353
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  50513309 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 50513353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 52311069 - 52311121
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||    
T  52311069 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaa 52311121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 56296663 - 56296611
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||| |||||||    
T  56296663 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagtcaaaaaa 56296611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4107115 - 4107167
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  4107115 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 4107167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6641865 - 6641915
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  6641865 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaa 6641915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23233827 - 23233777
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  23233827 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaa 23233777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29233772 - 29233825
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaat 53  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||| ||||||    
T  29233772 taaccgcaacttttaaaaagatagaggtccaaaagtgcaattaagcctaaaaat 29233825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30358889 - 30358840
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||||    
T  30358889 taaccgcaacttttgaaaagatcgaggtccaaaagtgcaattaagccaaa 30358840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4167467 - 4167515
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  4167467 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaa 4167515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20095954 - 20096006
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  20095954 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 20096006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39515604 - 39515552
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  39515604 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 39515552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20813782 - 20813731
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcca-aagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||| ||||    
T  20813782 taaccgcaacttttgaaaagataggggtccacaagtgcaattaagcctaaaa 20813731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33881354 - 33881397
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaa 43  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  33881354 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaa 33881397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 414922 - 414968
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  414922 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 414968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2321562 - 2321516
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  2321562 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 2321516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6014465 - 6014419
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  6014465 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 6014419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7013617 - 7013663
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    |||||||||||||||||||||||||  ||| ||||||||||||||||    
T  7013617 taaccgcaacttttgaaaagatagagatccaaaagtgcaattaagcc 7013663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7151109 - 7151159
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  7151109 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaa 7151159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15187974 - 15187928
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  15187974 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 15187928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17943404 - 17943358
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  17943404 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 17943358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20819798 - 20819752
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  20819798 taaccgcaacttttgaaaagatagtggtccaaaagtgcaattaagcc 20819752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23234047 - 23234093
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  23234047 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 23234093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31191737 - 31191783
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||    
T  31191737 taaccgcaacttttaaaaagatagaggtccaaaagtgcaattaagcc 31191783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37953420 - 37953374
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  37953420 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 37953374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41554653 - 41554607
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||    
T  41554653 taaccgcaacttttgaaaagataaaggtccgaaagtgcaattaagcc 41554607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42866360 - 42866406
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  42866360 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 42866406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42906418 - 42906372
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  42906418 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 42906372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45106481 - 45106435
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  45106481 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 45106435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 414713 - 414656
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa-aaaatatt 56  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||||| ||||||||    
T  414713 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaataaaatatt 414656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6335378 - 6335333
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagc 45  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  6335378 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagc 6335333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 29197340 - 29197299
Alignment:
Q  5 cgcaacttttgaaaagatagatgtccaaagtgcaattaagcc 46  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  29197340 cgcaacttttgaaaagataggggtcaaaagtgcaattaagcc 29197299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 38701931 - 38701972
Alignment:
Q  5 cgcaacttttgaaaagatagatgtccaaagtgcaattaagcc 46  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  38701931 cgcaacttttgaaaagataggggtcaaaagtgcaattaagcc 38701972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44886171 - 44886228
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc-aaaaaatatt 56  Q
    ||||||||||||||||||||||||  |||| ||||||||||||| || ||||||||||    
T  44886171 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaaacctaaaaaatatt 44886228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5734452 - 5734504
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||| ||||    
T  5734452 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccataaaa 5734504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 6745263 - 6745307
Alignment:
Q  3 accgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||    
T  6745263 accgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 6745307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 14024307 - 14024359
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| ||| ||||||||||||||||||    
T  14024307 taaccgcaacttttggaaagataggggtccaaaaatgcaattaagccaaaaaa 14024359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16531294 - 16531242
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||| | ||||||||||||||||    
T  16531294 taaccgcaacttttgaaaagataggggtccaaaaatacaattaagccaaaaaa 16531242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20283942 - 20283990
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  20283942 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaa 20283990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21070570 - 21070618
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  21070570 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaa 21070618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 35735549 - 35735498
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  35735549 taaccgcaacttttggaaagatagg-gtccaaaagtgcaattaagccaaaaaa 35735498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40918641 - 40918689
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  40918641 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaa 40918689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45209022 - 45208970
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||| || |||||    
T  45209022 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaaacctaaaaa 45208970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10319160 - 10319212
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  10319160 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 10319212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30699291 - 30699342
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  30699291 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaa 30699342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38445673 - 38445724
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  38445673 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaa 38445724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38053415 - 38053465
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  38053415 taaccgcaacttttgaaaagataggagtccaaaagtgcaattaagccaaaa 38053465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23910122 - 23910171
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  23910122 taaccgcaacttttgaaaagatagtggtccaaaagtgcaattaagccaaa 23910171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 388168 - 388216
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  388168 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaa 388216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3931692 - 3931640
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||||| |||||    
T  3931692 taaccccaacttttgaaaagatagaggtccaaaagtgcaattaagcccaaaaa 3931640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16537123 - 16537075
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  16537123 taaccgcaacttttgaaaagataggagtccaaaagtgcaattaagccaa 16537075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16628539 - 16628587
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  16628539 taaccgcaacttttgaaaagataggagtccaaaagtgcaattaagccaa 16628587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25986971 - 25986919
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||| |||||    
T  25986971 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctaaaaa 25986919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35121680 - 35121732
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||| |||||    
T  35121680 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctaaaaa 35121732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37047933 - 37047985
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| |||||||||||||| |||||||    
T  37047933 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagtcaaaaaa 37047985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39976775 - 39976723
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  39976775 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 39976723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21917517 - 21917580
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc-aaaaaatattgacatc 62  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||| | ||||||||| ||||    
T  21917517 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctacaaaatattgtcatc 21917580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38879207 - 38879156
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||| ||||    
T  38879207 taaccgcaacttttgaaaagatagaggtccaaaagtacaattaagcctaaaa 38879156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 930975 - 931021
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  930975 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 931021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3925839 - 3925793
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  3925839 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 3925793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18852541 - 18852495
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  18852541 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 18852495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19194428 - 19194474
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  19194428 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 19194474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19778521 - 19778567
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  19778521 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 19778567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23909941 - 23909895
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  23909941 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 23909895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26612610 - 26612656
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  26612610 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 26612656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34533480 - 34533526
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  34533480 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 34533526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35711925 - 35711975
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||||||||||||  |||| ||||||||||||| ||||||    
T  35711925 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaaaccaaaa 35711975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37452316 - 37452362
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  37452316 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 37452362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43408471 - 43408517
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  43408471 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 43408517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 17802179 - 17802220
Alignment:
Q  5 cgcaacttttgaaaagatagatgtccaaagtgcaattaagcc 46  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  17802179 cgcaacttttgaaaagataggggtcaaaagtgcaattaagcc 17802220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19233586 - 19233635
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||||||    
T  19233586 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaa 19233635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43408270 - 43408221
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||| ||||||||| |||| |||||| ||||||||||||    
T  43408270 taaccgcaacttttggaaagatagaggtccaaaagtgaaattaagccaaa 43408221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 45863064 - 45863023
Alignment:
Q  5 cgcaacttttgaaaagatagatgtccaaagtgcaattaagcc 46  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  45863064 cgcaacttttgaaaagataggggtcaaaagtgcaattaagcc 45863023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4061255 - 4061307
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| ||| ||||||||||||||||||    
T  4061255 taaccgcaacttttggaaagataggggtccaaaaatgcaattaagccaaaaaa 4061307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10715884 - 10715832
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| |||| |||  ||||||| |||||||||||||||||||    
T  10715884 taaccgcaacttttggaaagttaggggtccaaaagtgcaattaagccaaaaaa 10715832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11275432 - 11275480
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  ||||||| ||| |||||||||||    
T  11275432 taaccgcaacttttgaaaagataggggtccaaaggtgtaattaagccaa 11275480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45231568 - 45231516
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    |||||| |||||||||||||||||  |||| ||||||||||||||||| ||||    
T  45231568 taaccgtaacttttgaaaagataggggtccaaaagtgcaattaagccataaaa 45231516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10894137 - 10894189
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  10894137 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagccaaaaaa 10894189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28930731 - 28930783
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  28930731 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 28930783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1815022 - 1814972
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  1815022 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaa 1814972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5606564 - 5606610
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  5606564 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagcc 5606610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10977704 - 10977654
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  10977704 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaa 10977654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11446022 - 11445965
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa-aaaatatt 56  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| |||| ||||||||    
T  11446022 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaaaccaataaaatatt 11445965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15149773 - 15149724
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  15149773 taaccgcaacttttgaaaagataggagtccaaaagtgcaattaagccaaa 15149724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18683058 - 18683009
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||||||||    
T  18683058 taaccacaacttttgaaaagatagaggtccaaaagtgcaattaagccaaa 18683009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28930510 - 28930465
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagc 45  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  28930510 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagc 28930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3535046 - 3535098
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  3535046 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaaaccaaaaaa 3535098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13042454 - 13042398
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaatatt 56  Q
    ||||||||||||||| ||||||||  ||||||| ||||||||||||| |||||||||    
T  13042454 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaatatt 13042398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31833312 - 31833260
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||| ||||||    
T  31833312 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcaaaaaaa 31833260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11746246 - 11746293
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcca 47  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||    
T  11746246 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcca 11746293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2100426 - 2100380
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  2100426 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 2100380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2565124 - 2565078
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  2565124 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 2565078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2565346 - 2565392
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  2565346 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 2565392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6261427 - 6261365
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcca-aaaaatattgacat 61  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||| |||||||| |||||    
T  6261427 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccataaaaatatagacat 6261365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7391744 - 7391790
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  7391744 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 7391790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11322292 - 11322338
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  11322292 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 11322338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23883135 - 23883086
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    |||||||||||||||||||||||   |||| |||||||||||||||||||    
T  23883135 taaccgcaacttttgaaaagataagggtccaaaagtgcaattaagccaaa 23883086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3195762 - 3195718
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  3195762 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 3195718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 6324243 - 6324195
Alignment:
Q  6 gcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaat 53  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||||    
T  6324243 gcaacttttgaaaagatagggggccaaaagtgcaattaagccaaaaaat 6324195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22279545 - 22279493
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||| ||||||    
T  22279545 taaccgcaacttttggaaagataggagtccaaaagtgcaattaagcaaaaaaa 22279493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30965737 - 30965685
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    |||| |||||||||||||||||||  |||| |||||||||||||||| |||||    
T  30965737 taactgcaacttttgaaaagataggggtccaaaagtgcaattaagcctaaaaa 30965685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34705643 - 34705695
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||  ||||||||  ||||||| |||||||||||||||||||    
T  34705643 taaccgcaacttttagaaagataggggtccaaaagtgcaattaagccaaaaaa 34705695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26323642 - 26323694
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  26323642 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 26323694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22773852 - 22773897
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagc 45  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  22773852 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagc 22773897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34169055 - 34169104
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  34169055 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaa 34169104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8340005 - 8339957
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  8340005 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaa 8339957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15738120 - 15738068
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtc-caaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  15738120 taaccgcaacttttgaaaagataggggtcaaaaagtgcaattaagccaaaaaa 15738068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23263412 - 23263464
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||| ||| ||||||||| ||||||| |||||||||||||||||||    
T  23263412 taaccgcaactgttggaaagatagaggtccaaaagtgcaattaagccaaaaaa 23263464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16597087 - 16597044
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaa 43  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  16597087 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaa 16597044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2710604 - 2710650
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  2710604 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 2710650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3020861 - 3020907
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  3020861 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 3020907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4096718 - 4096764
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||    
T  4096718 taaccgcaacttttgaaaagataaaggtccaaaagtgcaattaagcc 4096764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13960957 - 13961003
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  13960957 taaccgcaacttttgaaaagatagaggtccaaaagtacaattaagcc 13961003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15526750 - 15526696
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaata 54  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||||    
T  15526750 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaata 15526696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21583369 - 21583323
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgt-ccaaagtgcaattaagcc 46  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||    
T  21583369 taaccgcaacttttggaaagatagaggtcccaaagtgcaattaagcc 21583323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21583590 - 21583640
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  21583590 taaccgcaacttttggaaagataggagtccaaaagtgcaattaagccaaaa 21583640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23263191 - 23263145
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  23263191 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 23263145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31456128 - 31456174
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  31456128 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 31456174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34082368 - 34082414
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  34082368 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 34082414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34606637 - 34606683
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  34606637 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 34606683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34734340 - 34734386
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  34734340 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 34734386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35306969 - 35307015
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  35306969 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 35307015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40687712 - 40687666
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  40687712 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 40687666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42739854 - 42739904
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    |||||||||||||| |||||||||  |||| ||||||||||||||||||||    
T  42739854 taaccgcaacttttaaaaagataggggtccaaaagtgcaattaagccaaaa 42739904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8755059 - 8755007
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||| ||||  |||| ||||||||||||| ||||||||    
T  8755059 taaccgcaacttttgaaaaaataggggtccaaaagtgcaattaaaccaaaaaa 8755007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9072014 - 9071962
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||    
T  9072014 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaa 9071962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 12610547 - 12610591
Alignment:
Q  7 caacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaa 50  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||    
T  12610547 caacttttgaaaagatagagggccaaaagtgcaattaagccaaaa 12610591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 14647955 - 14648007
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||| ||||||||||||||||  |||| ||||| ||||||||||||||||    
T  14647955 taaccgcgacttttgaaaagataggggtccaaaagtacaattaagccaaaaaa 14648007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40767934 - 40767890
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  40767934 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 40767890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 45760500 - 45760552
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  45760500 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 45760552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2118981 - 2119032
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  2118981 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaa 2119032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 29168995 - 29169046
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtc-caaagtgcaattaagccaaaaa 51  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  29168995 taaccgcaacttttgaaaagatagatgtctaaaagtgcaattaagcctaaaa 29169046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41282114 - 41282165
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  41282114 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaa 41282165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40082258 - 40082212
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  40082258 taaccgcaacttttgaaaagataggtgtccaaaagtgcaattaagcc 40082212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47943505 - 47943459
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  47943505 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagcc 47943459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49997923 - 49997969
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  49997923 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagcc 49997969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17483825 - 17483874
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  17483825 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaa 17483874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25053851 - 25053903
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  25053851 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 25053903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27857402 - 27857454
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  27857402 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 27857454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32508186 - 32508238
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||| |||||    
T  32508186 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagccgaaaaa 32508238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 38511705 - 38511653
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||   ||| ||||||||||||||||||||||    
T  38511705 taaccgcaacttttgaaaagatagggatccaaaagtgcaattaagccaaaaaa 38511653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43678969 - 43679017
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  43678969 taaccgcaacttttgaaaatataggtgtccaaaagtgcaattaagccaa 43679017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 51213349 - 51213301
Alignment:
Q  5 cgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  51213349 cgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 51213301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 51842847 - 51842795
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtc-caaagtgcaattaagccaaaaaa 52  Q
    |||||||||||||||||||||||||  ||  ||||||||||||||||||||||    
T  51842847 taaccgcaacttttgaaaagatagagatctaaaagtgcaattaagccaaaaaa 51842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 53192380 - 53192432
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  53192380 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 53192432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47530385 - 47530334
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaa 51  Q
    ||||||||||||||| ||||||||  ||||||| ||||||||||||||||||    
T  47530385 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaa 47530334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5154048 - 5154102
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaata 54  Q
    ||||||||||||||| ||| ||||  ||||||| |||||||||||||||||||||    
T  5154048 taaccgcaacttttggaaaaatagtggtccaaaagtgcaattaagccaaaaaata 5154102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9153523 - 9153477
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  9153523 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 9153477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19914522 - 19914476
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  19914522 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 19914476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21841978 - 21842024
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtc-caaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  21841978 taaccgcaacttttgaaaagatagaggtctaaaagtgcaattaagcc 21842024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25126265 - 25126311
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  25126265 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 25126311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31117666 - 31117620
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  31117666 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 31117620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32205114 - 32205160
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  32205114 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 32205160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33576676 - 33576722
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  33576676 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 33576722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38511924 - 38511970
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  38511924 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 38511970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41223559 - 41223513
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  41223559 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 41223513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42230079 - 42230033
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  42230079 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 42230033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47943727 - 47943773
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  47943727 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 47943773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51214426 - 51214472
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||    
T  51214426 taaccgcaacttttaaaaagatagaggtccaaaagtgcaattaagcc 51214472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 51336936 - 51336890
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  51336936 taaccgcaacttttgaaaagataggagtccaaaagtgcaattaagcc 51336890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 53531852 - 53531806
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  53531852 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 53531806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14015410 - 14015463
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaat 53  Q
    ||||||||||||||||||||||||  |||| ||||| || ||||||||||||||    
T  14015410 taaccgcaacttttgaaaagataggggtccaaaagtacacttaagccaaaaaat 14015463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17483607 - 17483558
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||||||    
T  17483607 taaccacaacttttgaaaagataggggtccaaaagtgcaattaagccaaa 17483558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27984185 - 27984136
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    |||||||||||||| |||||||||  |||| |||||||||||||||||||    
T  27984185 taaccgcaacttttaaaaagataggggtccaaaagtgcaattaagccaaa 27984136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44184238 - 44184295
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa-aaaatatt 56  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||||| ||||||||    
T  44184238 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaataaaatatt 44184295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49859718 - 49859763
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagc 45  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||    
T  49859718 taaccgcaacttttgaaaagatagaggtccaaaagtacaattaagc 49859763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 51187959 - 51188000
Alignment:
Q  5 cgcaacttttgaaaagatagatgtccaaagtgcaattaagcc 46  Q
    |||||||||| |||||||||| ||| ||||||||||||||||    
T  51187959 cgcaacttttaaaaagatagaggtcaaaagtgcaattaagcc 51188000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 52613589 - 52613634
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagc 45  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  52613589 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagc 52613634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 787145 - 787097
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  |||| ||| ||||||||||||||    
T  787145 taaccgcaacttttgaaaagataggggtccaaaaatgcaattaagccaa 787097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3212419 - 3212467
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  3212419 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaa 3212467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8727959 - 8727915
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  8727959 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 8727915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9079846 - 9079802
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  9079846 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 9079802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27719953 - 27719997
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  27719953 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 27719997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 36441528 - 36441476
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||  ||||||||  ||||||| |||||||||||||||||||    
T  36441528 taaccgcaacttttagaaagataggagtccaaaagtgcaattaagccaaaaaa 36441476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39905774 - 39905730
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtc-caaagtgcaattaag 44  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||    
T  39905774 taaccgcaacttttgaaaagatagaggtcaaaaagtgcaattaag 39905730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44895915 - 44895967
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||    
T  44895915 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaa 44895967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000006; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6491683 - 6491735
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  6491683 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 6491735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13791842 - 13791894
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  13791842 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 13791894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40815133 - 40815181
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40815133 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagccaa 40815181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 52149781 - 52149833
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  52149781 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 52149833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3384010 - 3383959
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  3384010 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagcctaaaa 3383959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6491462 - 6491416
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  6491462 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagcc 6491416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42589466 - 42589417
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  42589466 taaccgcaacttttgtaaagatagaagtccaaaagtgcaattaagccaaa 42589417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47764137 - 47764088
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  47764137 taaccgcaacttttgaaaaaatagaggtccaaaagtgcaattaagccaaa 47764088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6183249 - 6183297
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  6183249 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaa 6183297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18589895 - 18589847
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  18589895 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagccaa 18589847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22075618 - 22075666
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  22075618 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaa 22075666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23342010 - 23341958
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||| |||||    
T  23342010 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctaaaaa 23341958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28503403 - 28503455
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    |||||| |||||||||||||||||  ||||||| |||||||||||||||||||    
T  28503403 taaccgtaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaaa 28503455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29704663 - 29704619
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||    
T  29704663 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaag 29704619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 32341541 - 32341489
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  32341541 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 32341489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 38622670 - 38622718
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  38622670 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaa 38622718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 46320722 - 46320670
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||| |||||    
T  46320722 taaccgcaacttttgaaaagataggagtccaaaagtgcaattaagcccaaaaa 46320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2371444 - 2371495
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    |||||||||||||| |||||||||  |||| |||||||||||||||||||||    
T  2371444 taaccgcaactttttaaaagataggggtccaaaagtgcaattaagccaaaaa 2371495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6183028 - 6182977
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaa 51  Q
    ||||||||||||||| ||||||||  ||||||| ||||||||||||||||||    
T  6183028 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaa 6182977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9058212 - 9058161
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaa 51  Q
    ||||||||||||||| ||||||||  ||||||| ||||||||||||||||||    
T  9058212 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaa 9058161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37029195 - 37029242
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcca 47  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||    
T  37029195 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcca 37029242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43677369 - 43677419
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  43677369 taaccgcaacttttgaaaagatag-ggtccaaaagtgcaattaagccaaaaa 43677419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3264046 - 3263992
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaata 54  Q
    |||||| |||||||| ||||||||  ||||||| |||||||||||||||||||||    
T  3264046 taaccgtaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaata 3263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8770509 - 8770463
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  8770509 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 8770463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11018669 - 11018715
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  11018669 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 11018715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16491242 - 16491288
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||    
T  16491242 taaccgcaacttttgaaaagataaaggtccaaaagtgcaattaagcc 16491288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22204351 - 22204305
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  22204351 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 22204305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22204573 - 22204619
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  22204573 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 22204619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 23793049 - 23793107
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaatattga 58  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||||| | |||||||    
T  23793049 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaatatatattga 23793107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32341759 - 32341805
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  32341759 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 32341805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39427457 - 39427411
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  39427457 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 39427411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42407152 - 42407202
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  42407152 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaa 42407202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45884994 - 45884948
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  45884994 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 45884948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46320943 - 46320989
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  46320943 taaccgcaacttttggaaagatagaggtccaaaagtgcaattaagcc 46320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52143432 - 52143478
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  52143432 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 52143478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 6912258 - 6912213
Alignment:
Q  5 cgcaacttttgaaaagatagatgtccaaagtgcaattaagccaaaa 50  Q
    ||||||||||||||||||||  | | ||||||||||||||||||||    
T  6912258 cgcaacttttgaaaagataggggccaaaagtgcaattaagccaaaa 6912213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12071912 - 12071961
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||| |||||||||  ||| |||||||||||||||||||    
T  12071912 taaccgcaacttttggaaagatagagatccaaaagtgcaattaagccaaa 12071961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20224124 - 20224079
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagc 45  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||    
T  20224124 taaccgcaacttttgaaaagataggagtccaaaagtgcaattaagc 20224079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26434957 - 26435010
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaat 53  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||||| ||||    
T  26434957 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaataaat 26435010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 26932624 - 26932583
Alignment:
Q  5 cgcaacttttgaaaagatagatgtccaaagtgcaattaagcc 46  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  26932624 cgcaacttttgaaaagataggggtcaaaagtgcaattaagcc 26932583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41585552 - 41585597
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagc 45  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||    
T  41585552 taaccgcaacttttaaaaagatagaggtccaaaagtgcaattaagc 41585597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 48332991 - 48333036
Alignment:
Q  7 caacttttgaaaagatagatgtccaaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||| | | |||||||||||||||| |||||    
T  48332991 caacttttgaaaagatagaagccaaaagtgcaattaagcctaaaaa 48333036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11204553 - 11204501
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||    
T  11204553 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaa 11204501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20471460 - 20471408
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtc-caaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||| |||  |||||||||||||||| |||||    
T  20471460 taaccgcaacttttggaaagatagaggtctaaaagtgcaattaagcctaaaaa 20471408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 20560077 - 20560129
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtc-caaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||| |||  |||||||||||||||| |||||    
T  20560077 taaccgcaacttttggaaagatagaggtctaaaagtgcaattaagcctaaaaa 20560129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21727882 - 21727926
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  21727882 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 21727926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27855609 - 27855557
Alignment:
Q  1 taaccgcaacttttgaaaagatagatg-tccaaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  | || ||||||||||||||||| ||||    
T  27855609 taaccgcaacttttgaaaagataggggttcaaaagtgcaattaagccataaaa 27855557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41585331 - 41585283
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    |||||||||||||||||||||||||  ||| ||| ||||||||||||||    
T  41585331 taaccgcaacttttgaaaagatagagatccaaaaatgcaattaagccaa 41585283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43670581 - 43670633
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||| ||||  ||||||| |||||||||||||||||||    
T  43670581 taaccgcaacttttggaaatataggggtccaaatgtgcaattaagccaaaaaa 43670633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43914847 - 43914899
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||| |||||    
T  43914847 taaccacaacttttgaaaagataggggtccaaaagtgcaattaagcctaaaaa 43914899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 45885216 - 45885268
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||    
T  45885216 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaa 45885268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39642775 - 39642724
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  39642775 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaaa 39642724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21843447 - 21843501
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaata 54  Q
    ||||||||||||||| ||||||||  ||||||| |||||||||||||||||||||    
T  21843447 taaccgcaacttttggaaagataggagtccaaaagtgcaattaagccaaaaaata 21843501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22194715 - 22194765
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaa 50  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  22194715 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagccaaaa 22194765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24895178 - 24895230
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||| |||||    
T  24895178 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcctaaaaa 24895230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21552808 - 21552859
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaa 51  Q
    |||||||||||||||||||||||   |||| |||||||||||||||||||||    
T  21552808 taaccgcaacttttgaaaagatatgggtccaaaagtgcaattaagccaaaaa 21552859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38731325 - 38731278
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcca 47  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||    
T  38731325 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcca 38731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41829732 - 41829775
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaa 43  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  41829732 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaa 41829775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24205340 - 24205294
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  24205340 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 24205294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31784298 - 31784252
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  31784298 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 31784252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40493692 - 40493638
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaata 54  Q
    |||||||||||||| |||||||||  |||| ||||||||||||||||| ||||||    
T  40493692 taaccgcaacttttaaaaagataggggtccaaaagtgcaattaagccataaaata 40493638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40493912 - 40493958
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  40493912 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 40493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2937056 - 2937101
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaagtgcaattaagcc 46  Q
    ||||||||||||||  ||||||||| ||||||| ||||||||||||    
T  2937056 taaccgcaacttttagaaagatagaggtccaaaatgcaattaagcc 2937101  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1375428 - 1375472
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaag 44  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||    
T  1375428 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaag 1375472  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1466856 - 1466808
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  1466856 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaa 1466808  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17798894 - 17798846
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  17798894 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaa 17798846  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21552587 - 21552539
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  21552587 taaccacaacttttgaaaagataggggtccaaaagtgcaattaagccaa 21552539  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22093281 - 22093229
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| |||||||| ||||||| |||||    
T  22093281 taaccgcaacttttgaaaagataggggtccaaaagtgcatttaagcctaaaaa 22093229  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24858143 - 24858195
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||   ||| |||||||||||||||| |||||    
T  24858143 taaccgcaacttttgaaaagatagggatccaaaagtgcaattaagcctaaaaa 24858195  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 34850924 - 34850976
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    |||| |||||||||| ||||||||  ||||||| |||||||||||||||||||    
T  34850924 taactgcaacttttggaaagataggggtccaaaagtgcaattaagccaaaaaa 34850976  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36566649 - 36566605
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcca-aagtgcaattaag 44  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||    
T  36566649 taaccgcaacttttgaaaagataggggtccagaagtgcaattaag 36566605  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39431436 - 39431484
Alignment:
Q  1 taaccgcaacttttgaaaagatagatg-tccaaagtgcaattaagccaa 48  Q
    |||||||||||||| |||||||||| | || ||||||||||||||||||    
T  39431436 taaccgcaacttttaaaaagatagaggttcaaaagtgcaattaagccaa 39431484  T

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Target: scaffold0272 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20914 - 20868
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  20914 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaagcc 20868  T

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Target: scaffold0272; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10828 - 10880
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||||| |||||    
T  10828 taaccgcaacttttgaaaagataggggtccaaaaatgcaattaagcctaaaaa 10880  T

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Target: scaffold0236 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 23119 - 23167
Alignment:
Q  5 cgcaacttttgaaaagatagatgtccaaa-gtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  23119 cgcaacttttgaaaagatagaggaccaaaagtgcaattaagccaaaaaa 23167  T

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Target: scaffold0182 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12093 - 12045
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  12093 taaccgcaacttttgaaaagatagaggtccaaaagtgcaattaaaccaa 12045  T

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Target: scaffold0182; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20641 - 20595
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  20641 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 20595  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 75342 - 75394
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||||||||||||  |||| ||||||||||||| ||||||||    
T  75342 taaccgcaacttttgaaaagataggagtccaaaagtgcaattaaaccaaaaaa 75394  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 79254 - 79300
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc 46  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||    
T  79254 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaagcc 79300  T

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Target: scaffold0283 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1230 - 1173
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagcc-aaaaaatatt 56  Q
    ||||||||||||||||||||||||  |||| ||||||||||||| || ||||||||||    
T  1230 taaccgcaacttttgaaaagataggggtccaaaagtgcaattaaacctaaaaaatatt 1173  T

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Target: scaffold0213 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21314 - 21363
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaa 49  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||||||    
T  21314 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaaa 21363  T

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Target: scaffold0922 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 100 - 152
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||| |||||    
T  100 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagcctaaaaa 152  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22341 - 22293
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  22341 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaa 22293  T

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Target: scaffold0121; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22543 - 22591
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaa 48  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  22543 taaccgcaacttttggaaagataggggtccaaaagtgcaattaagccaa 22591  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 238668 - 238616
Alignment:
Q  1 taaccgcaacttttgaaaagatagatgtcc-aaagtgcaattaagccaaaaaa 52  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||| |||||    
T  238668 taaccacaacttttgaaaagataggggtccaaaagtgcaattaagcctaaaaa 238616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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