View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11901_low_56 (Length: 245)
Name: NF11901_low_56
Description: NF11901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11901_low_56 |
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Alignment Details
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 49 - 229
Target Start/End: Original strand, 15978221 - 15978401
Alignment:
| Q |
49 |
aaatggctcagttattatgggacgggtgtagtaataatgtttaagggtttgtattaaagttttaagggtgtgcatttaatcatttagcctaacatttaga |
148 |
Q |
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| T |
15978221 |
aaatggctcagttattacgggacgggtggagtaacaatgtttaagggtttgtattaaagttttaagggtgtgtatttaatcatttaacctaacatttaga |
15978320 |
T |
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| Q |
149 |
gttgtaataaagttcaagggtgtgtaataaagatttaagcagcctcaaacatcaacaacgtagcatcaaagacatagttta |
229 |
Q |
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| T |
15978321 |
gctgtaataaagttcaagggtgtgtaataaagatttaagcaacctcaaacatcaacaaaatagcatcaaagacatagttta |
15978401 |
T |
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