View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11901_low_7 (Length: 575)

Name: NF11901_low_7
Description: NF11901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11901_low_7
NF11901_low_7
[»] chr5 (4 HSPs)
chr5 (179-575)||(15801833-15802229)
chr5 (11-150)||(15802258-15802397)
chr5 (436-575)||(12596588-12596727)
chr5 (517-575)||(30416782-30416840)
[»] chr8 (17 HSPs)
chr8 (297-575)||(3392537-3392814)
chr8 (297-575)||(3363069-3363347)
chr8 (11-146)||(3392245-3392380)
chr8 (11-146)||(3363504-3363639)
chr8 (416-575)||(3313699-3313861)
chr8 (11-149)||(3314192-3314328)
chr8 (517-575)||(3408490-3408548)
chr8 (517-575)||(7165837-7165895)
chr8 (517-551)||(13786511-13786545)
chr8 (483-573)||(13807748-13807838)
chr8 (518-575)||(3326154-3326211)
chr8 (243-296)||(3363373-3363425)
chr8 (243-295)||(3392459-3392510)
chr8 (517-572)||(3263698-3263753)
chr8 (483-573)||(3268362-3268452)
chr8 (517-551)||(3287625-3287659)
chr8 (517-575)||(3399790-3399848)
[»] chr3 (2 HSPs)
chr3 (517-573)||(32412133-32412189)
chr3 (517-575)||(6907020-6907078)
[»] chr6 (3 HSPs)
chr6 (524-574)||(5261431-5261481)
chr6 (524-574)||(5285430-5285480)
chr6 (502-574)||(5355879-5355951)
[»] chr4 (1 HSPs)
chr4 (495-575)||(4351895-4351975)


Alignment Details
Target: chr5 (Bit Score: 376; Significance: 0; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 179 - 575
Target Start/End: Complemental strand, 15802229 - 15801833
Alignment:
Q  179 ggaatccttaacttgctatttggtaactaaaaagcaacacataaaatttctgcttaaacccttacccaatcatatataaaatgacatttttctcatgaac 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15802229 ggaatccttaacttgctatttggtaactaaaaagcaacacataaaatttctgcttaaacccttacccaatcatatataaaatgacatttttctcatgaac 15802130  T
Q  279 taacttctccaaaaactttggacaaacacttgtgagatgatgaatcccacaattttcagccaatagatgggaaaagtnnnnnnncatttctgaaacatag 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  15802129 taacttctccaaaaactttggacaaacacttgtgagatgatgaatcccacaattttcagccaatagatgggaaaagtaaaaaaacatttctgaaacatag 15802030  T
Q  379 ttttatttttatcttcaaagatcgtgaaggatgacaaaaattcaaaatgcaatgtagaattcttacggtttgttcggccagtacatcaactacatcttca 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15802029 ttttatttttatcttcaaagatcgtgaaggatgacaaaaattcaaaatgcaatgtagaattcttacggtttgttcggccagtacatcaactacatcttca 15801930  T
Q  479 aaacaccacaatcgagtacgtttctcaggctcctcaggtgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15801929 aaacaccacaatcgagtacgtttctcaggctcctcaggtgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 15801833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 15802397 - 15802258
Alignment:
Q  11 acatcatcaagttgcaacaatcgcaatttcttcattttcttaaaagcaattgtattgaagcaaactctactggtcctttgcaacttcaaaaccaatccct 110  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15802397 acattatcaagttgcaacaatcgcaatttcttcattttcttaagagcaattgtattgaagcaaactctactggtcctttgcgacttcaaaaccaatccct 15802298  T
Q  111 cgatggcttttgttccctgtaacacaaagaaagaccatag 150  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  15802297 cgatggcttttgttccctgtgacacaaagaaagaccatag 15802258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 436 - 575
Target Start/End: Complemental strand, 12596727 - 12596588
Alignment:
Q  436 aattcttacggtttgttcggccagtacatcaactacatcttcaaaacaccacaatcgagtacgtttctcaggctcctcaggtgaactttcacgaacaatt 535  Q
    |||||||||||| || |||| || |||||||||||||||||||   |||||||||||| |||  |||||||||||||||||||||||||| |||||||||    
T  12596727 aattcttacggtatggtcggtcaatacatcaactacatcttcatggcaccacaatcgactacacttctcaggctcctcaggtgaactttcgcgaacaatt 12596628  T
Q  536 tctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    ||||||||||||||| |||||| ||||| |||||||||||    
T  12596627 tctcttcccatgtcttgtagcaaagcattcattccaagct 12596588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 575
Target Start/End: Complemental strand, 30416840 - 30416782
Alignment:
Q  517 tgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    |||| ||| |||||||||||||||||||||||||| ||  | | |||||||||||||||    
T  30416840 tgaattttgacgaacaatttctcttcccatgtctcttattaaatcatgcattccaagct 30416782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 1e-67; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 297 - 575
Target Start/End: Original strand, 3392537 - 3392814
Alignment:
Q  297 tggacaaacacttgtgagatgatgaatcccacaattttcagccaatagatgggaaaagtnnnnnnncatttctgaaacatagttttatttttatcttcaa 396  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||  | ||||||| ||    
T  3392537 tggacagacacatgtgagataatgaatcccacaattttcagccaatagattggaaaagtaaata--catttctgaaacatagtttt--tgttatctttaa 3392632  T
Q  397 agatcgtgaaggatgacaaaaattcaaaatgcaatgtaga---attcttacggtttgttcggccagtacatcaactacatcttcaaaacaccacaatcga 493  Q
    |||| ||||| ||||||||| ||||||||| |||||||||   ||||||||||| || ||  ||||||||| |||||| || |||  ||||||||||||     
T  3392633 agatagtgaaagatgacaaacattcaaaatacaatgtagagaaattcttacggtatggtcttccagtacattaactacgtcctcatgacaccacaatcgg 3392732  T
Q  494 gtacgtttctcaggctcctcaggtgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||    
T  3392733 gtacgcttctcaggctcctccggtgaactttcacgaacaatttcccttcccatgtctcgtagcaaatcatgcattccaagct 3392814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 297 - 575
Target Start/End: Complemental strand, 3363347 - 3363069
Alignment:
Q  297 tggacaaacactt-gtgagatgatgaatcccacaattttcagccaatagatgggaaaagtnnnnnnncatttctgaaacatagttttatttttatcttca 395  Q
    |||||| |||||| |||| || ||||||||||||||||||||||||||||| |||||| |       ||||||||||||||||||||  | ||||||| |    
T  3363347 tggacagacacttagtgaaataatgaatcccacaattttcagccaatagattggaaaattaaaaa--catttctgaaacatagtttt--tgttatcttta 3363252  T
Q  396 aagatcgtgaaggatgacaaaaattcaaaatgcaatgtag---aattcttacggtttgttcggccagtacatcaactacatcttcaaaacaccacaatcg 492  Q
    ||||| |||||  ||||||||| ||||||||||||||||    |||||||||||| |  || |||||||||| |||||| || |||   |||||||||||    
T  3363251 aagatagtgaaaaatgacaaaagttcaaaatgcaatgtactgaaattcttacggtatagtctgccagtacattaactacgtcctcatggcaccacaatcg 3363152  T
Q  493 agtacgtttctcaggctcctcaggtgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
     ||| | || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  3363151 ggtatgcttttcaggctcctccggtgaactttcacgaacaatttcccttcccatgtctcgtagcaaagcatgcattccaagct 3363069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 3392245 - 3392380
Alignment:
Q  11 acatcatcaagttgcaacaatcgcaatttcttcattttcttaaaagcaattgtattgaagcaaactctactggtcctttgcaacttcaaaaccaatccct 110  Q
    |||| ||||||||||||||||| |||| |||||||||||| ||||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||    
T  3392245 acattatcaagttgcaacaatctcaatctcttcattttctcaaaagcaattgtatcaaagcaaactctattggtctttggcaacttcataaccaatccct 3392344  T
Q  111 cgatggcttttgttccctgtaacacaaagaaagacc 146  Q
    |||||||||||||||||||| |||||||||||||||    
T  3392345 cgatggcttttgttccctgtgacacaaagaaagacc 3392380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 3363639 - 3363504
Alignment:
Q  11 acatcatcaagttgcaacaatcgcaatttcttcattttcttaaaagcaattgtattgaagcaaactctactggtcctttgcaacttcaaaaccaatccct 110  Q
    |||| ||||||||||||||||| |||| |  ||||||||| ||||||||||||||  |||||||||||| ||||| || ||||||||| |||||||||||    
T  3363639 acattatcaagttgcaacaatctcaatctaatcattttctcaaaagcaattgtatcaaagcaaactctattggtctttggcaacttcataaccaatccct 3363540  T
Q  111 cgatggcttttgttccctgtaacacaaagaaagacc 146  Q
    |||||||||||||||||||| |||||||||||||||    
T  3363539 cgatggcttttgttccctgtgacacaaagaaagacc 3363504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 416 - 575
Target Start/End: Complemental strand, 3313861 - 3313699
Alignment:
Q  416 aaattcaaaatgcaatgtaga---attcttacggtttgttcggccagtacatcaactacatcttcaaaacaccacaatcgagtacgtttctcaggctcct 512  Q
    |||||||||||||||||||||   |||||||| || || |||| |||||||||||||||||| |||  | ||||||||||| |||| || ||||||||||    
T  3313861 aaattcaaaatgcaatgtagataaattcttacagtatggtcggtcagtacatcaactacatcctcatgataccacaatcgactacgcttttcaggctcct 3313762  T
Q  513 caggtgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    |||||||||||||||| |||||||||| |||||||||||| || | | |||||||||||||||    
T  3313761 caggtgaactttcacggacaatttctcgtcccatgtctcgcagtaaatcatgcattccaagct 3313699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 3314328 - 3314192
Alignment:
Q  11 acatcatcaagttgcaacaatcgcaatttcttcattttcttaaaagcaattgtattgaagcaaactctactggtcctttgcaacttcaaaaccaatccct 110  Q
    |||| ||||||||||||||||| |||| |||||||||||| |||| | |||| || ||| | ||||||||||| |||||||||||||| |||||||||||    
T  3314328 acatgatcaagttgcaacaatctcaatctcttcattttctcaaaaccgattgcatcgaaaccaactctactggacctttgcaacttcataaccaatccct 3314229  T
Q  111 cgatggcttttgttccctgtaacacaaagaaagaccata 149  Q
    |||||||||||||||||||| ||||  ||||||||||||    
T  3314228 cgatggcttttgttccctgtgacac--agaaagaccata 3314192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 3408490 - 3408548
Alignment:
Q  517 tgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    |||||||||||| |||||||||||||||||||||| ||  | | |||||||||||||||    
T  3408490 tgaactttcacggacaatttctcttcccatgtctcttattaaatcatgcattccaagct 3408548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 7165837 - 7165895
Alignment:
Q  517 tgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    ||||||||  |||||||||||||||||||||||||  |||| | |||||||||||||||    
T  7165837 tgaactttggcgaacaatttctcttcccatgtctctaagcaaatcatgcattccaagct 7165895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 551
Target Start/End: Complemental strand, 13786545 - 13786511
Alignment:
Q  517 tgaactttcacgaacaatttctcttcccatgtctc 551  Q
    |||||||||||||||||||||||||||||||||||    
T  13786545 tgaactttcacgaacaatttctcttcccatgtctc 13786511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 573
Target Start/End: Complemental strand, 13807838 - 13807748
Alignment:
Q  483 accacaatcgagtacgtttctcaggctcctcaggtgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaag 573  Q
    ||||||||||| |||| ||| || |||||||   ||| |||| || |||||| |||||||||||||||||||| | | |||||||||||||    
T  13807838 accacaatcgactacgcttcccaagctcctcttctgatcttttacaaacaatctctcttcccatgtctcgtagtaaaccatgcattccaag 13807748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 518 - 575
Target Start/End: Original strand, 3326154 - 3326211
Alignment:
Q  518 gaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    ||||||||||||| |||||||||||||||||||| || || |  ||||||||||||||    
T  3326154 gaactttcacgaataatttctcttcccatgtctcttatcaaacaatgcattccaagct 3326211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 3363425 - 3363373
Alignment:
Q  243 cccaatcatatataaaatgacatttttctcatgaactaacttctccaaaaactt 296  Q
    |||||| ||||||||||||||||  ||||||||||||||| |||||||||||||    
T  3363425 cccaattatatataaaatgacatcattctcatgaactaac-tctccaaaaactt 3363373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 3392459 - 3392510
Alignment:
Q  243 cccaatcatatataaaatgacatttttctcatgaactaacttctccaaaaact 295  Q
    |||||| ||||||||||||||||  ||||||||||||||| ||||||||||||    
T  3392459 cccaattatatataaaatgacatcattctcatgaactaac-tctccaaaaact 3392510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 572
Target Start/End: Original strand, 3263698 - 3263753
Alignment:
Q  517 tgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaa 572  Q
    ||||||||||| ||||||||||||||||||||||| ||  | | ||||||||||||    
T  3263698 tgaactttcacaaacaatttctcttcccatgtctcttattaaatcatgcattccaa 3263753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 573
Target Start/End: Original strand, 3268362 - 3268452
Alignment:
Q  483 accacaatcgagtacgtttctcaggctcctcaggtgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaag 573  Q
    ||||||||||| |||| ||| ||||||| |    ||| |||| ||||||||| |||||||||||||||| ||||| |  ||||||||||||    
T  3268362 accacaatcgactacgcttcccaggctcttttattgatcttttacgaacaatctctcttcccatgtctcttagcaaactatgcattccaag 3268452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 551
Target Start/End: Original strand, 3287625 - 3287659
Alignment:
Q  517 tgaactttcacgaacaatttctcttcccatgtctc 551  Q
    |||||||||||||||||||||||||||||| ||||    
T  3287625 tgaactttcacgaacaatttctcttcccatatctc 3287659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 3399790 - 3399848
Alignment:
Q  517 tgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    ||||||||||| | ||||| |||||||||||||||  |||| | |||||||||||||||    
T  3399790 tgaactttcaccagcaattgctcttcccatgtctctgagcaaatcatgcattccaagct 3399848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 517 - 573
Target Start/End: Original strand, 32412133 - 32412189
Alignment:
Q  517 tgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaag 573  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||||||||||||    
T  32412133 tgaactctgacggacaatttctcttcccatgtctcttagcagatcatgcattccaag 32412189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 575
Target Start/End: Original strand, 6907020 - 6907078
Alignment:
Q  517 tgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    ||||||| ||||||||||||||||||||||||||| ||  | | |||||||||||||||    
T  6907020 tgaacttccacgaacaatttctcttcccatgtctcttattaaatcatgcattccaagct 6907078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 524 - 574
Target Start/End: Original strand, 5261431 - 5261481
Alignment:
Q  524 tcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagc 574  Q
    ||||||||||||||||||||||| ||||| | || | ||||||||||||||    
T  5261431 tcacgaacaatttctcttcccatatctcgcaacaaaccatgcattccaagc 5261481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 524 - 574
Target Start/End: Original strand, 5285430 - 5285480
Alignment:
Q  524 tcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagc 574  Q
    |||||||||||| |||||||||| ||||| |||| | ||||||||||||||    
T  5285430 tcacgaacaattcctcttcccatatctcgcagcaaaccatgcattccaagc 5285480  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 502 - 574
Target Start/End: Original strand, 5355879 - 5355951
Alignment:
Q  502 ctcaggctcctcaggtgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagc 574  Q
    |||||| ||||| |||||  | |||||||| | |||||||||||| |||||||||| | ||||||||| ||||    
T  5355879 ctcagggtcctccggtgatttctcacgaacgacttctcttcccatatctcgtagcaaatcatgcattctaagc 5355951  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 575
Target Start/End: Complemental strand, 4351975 - 4351895
Alignment:
Q  495 tacgtttctcaggctcctcaggtgaactttcacgaacaatttctcttcccatgtctcgtagcagagcatgcattccaagct 575  Q
    |||||| |||||||||||  |||||  | |||||||  |||||||||||||| ||||| |||| | ||||||| |||||||    
T  4351975 tacgttcctcaggctcctttggtgatttctcacgaatgatttctcttcccatatctcgcagcaaatcatgcatgccaagct 4351895  T

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