View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11902_low_14 (Length: 465)
Name: NF11902_low_14
Description: NF11902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11902_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 88 - 416
Target Start/End: Original strand, 15204118 - 15204446
Alignment:
| Q |
88 |
gtgaagaaattgccagttatcagaaaatggaagcgataaaacacgttgaagactgaaaccttgaggttgtgaaaaagtgggatgaagaggagcattcatg |
187 |
Q |
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| T |
15204118 |
gtgaagaaattaccagttgtcagaaaagggaagcgataaaacacgttgaagactgaaaccttgaggttgtgaaaaagtgggatgaagaggagcattcatg |
15204217 |
T |
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| Q |
188 |
aaaagttgcatgaattgaagttgtcttggtctagaaagtcttgtacctcgtgataaacccaacgtaagagggtcttctggaacaggacaagcagagccat |
287 |
Q |
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| T |
15204218 |
aaaagttgcatgaattgaagttgtcttggtctagaaagtcttgtacctcgtgataaacccaacgtaagagggtcttctggaacaggacaagcagagccat |
15204317 |
T |
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| Q |
288 |
caagtgtttttggtgttgaaatgtctaaatcccaaaatcctcctccgtccagtacccatcttagtttcctcatcactgcggatgctaatgctcctcgttc |
387 |
Q |
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| T |
15204318 |
caagtgtttttggtgttgaaatgtctaaatcccaaaatcctcctccgtccattacccatcttagtttcctcatcactgcagatgctaatgctcctcgttc |
15204417 |
T |
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| Q |
388 |
tgatggttgttgttgttcactctcacttc |
416 |
Q |
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| T |
15204418 |
tggtggttgttgctgttcactcacacttc |
15204446 |
T |
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