View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11902_low_36 (Length: 251)
Name: NF11902_low_36
Description: NF11902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11902_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 234
Target Start/End: Complemental strand, 11209981 - 11209750
Alignment:
| Q |
3 |
gtcgatagattacatcttataagttttaactgcggtttaatagtgactaacttttattggagaatttgtttaataggcaagatgagatttcctcatccaa |
102 |
Q |
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| T |
11209981 |
gtcgataaattacaccttataagttttaactgcggtttaatagtgactaacttttattggagaatttgtttaataggcaagatgagatttcctcatccaa |
11209882 |
T |
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| Q |
103 |
ccaaattttaaacttggaccaatccatttattattccctaattgttaatacttagccataaagtttcatatcgatgtctggaccagacatataatgtctt |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
11209881 |
ccaaattttaaacttggaccaatccatttattattccctaattgttaatacttagccataaagtttcatattgatgtctggaccagacatataatgtctt |
11209782 |
T |
|
| Q |
203 |
gatttgaaatcccaggtccccaacctcgtagg |
234 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
11209781 |
gatttgaaatcccaggtccccaacctcgtagg |
11209750 |
T |
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