View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11903_high_22 (Length: 206)
Name: NF11903_high_22
Description: NF11903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11903_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 31203981 - 31204160
Alignment:
| Q |
11 |
caaaggaagatgcaccaccagttctcaaatcaagccttggaagcttaaagcttgtagcaacatcttgagtgaaataacacatagcatctgatatcaagca |
110 |
Q |
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| T |
31203981 |
caaaggaagatgcaccaccagttctcaaaacaagccttggaagcttaaagcttgtagcaacatcttgagtgaaataacacatagcatctgatatcaagca |
31204080 |
T |
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| Q |
111 |
agcaataggttcctcagatacatcacatagtagtttacctaagcactccttgaatggcttcgcacatctaatgttgagtt |
190 |
Q |
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| T |
31204081 |
agcaataggttcctcagatacatcacatagtagtttacctaagcactccttgaatggcttcacacatctaatgttgagtt |
31204160 |
T |
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