View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11904_high_1 (Length: 418)

Name: NF11904_high_1
Description: NF11904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11904_high_1
NF11904_high_1
[»] chr8 (57 HSPs)
chr8 (280-416)||(27691150-27691286)
chr8 (281-418)||(27406907-27407044)
chr8 (277-418)||(33708814-33708954)
chr8 (284-403)||(601674-601793)
chr8 (284-409)||(13108355-13108480)
chr8 (302-418)||(15305815-15305931)
chr8 (302-418)||(15486184-15486300)
chr8 (279-403)||(33762683-33762807)
chr8 (284-418)||(8609797-8609931)
chr8 (284-418)||(13282478-13282612)
chr8 (284-373)||(29237151-29237240)
chr8 (284-373)||(29239187-29239276)
chr8 (276-403)||(8608229-8608357)
chr8 (284-403)||(27692807-27692926)
chr8 (284-403)||(33761069-33761188)
chr8 (284-403)||(38548801-38548920)
chr8 (285-403)||(33707207-33707325)
chr8 (284-390)||(38547228-38547334)
chr8 (284-403)||(35509214-35509333)
chr8 (284-403)||(35510789-35510908)
chr8 (287-418)||(42941777-42941908)
chr8 (284-373)||(13106804-13106893)
chr8 (284-373)||(15308261-15308350)
chr8 (284-373)||(15488630-15488719)
chr8 (287-403)||(13283965-13284081)
chr8 (284-403)||(42943396-42943515)
chr8 (284-403)||(26238726-26238845)
chr8 (287-418)||(26242324-26242455)
chr8 (287-390)||(41825682-41825785)
chr8 (287-373)||(27404213-27404299)
chr8 (284-418)||(41042594-41042728)
chr8 (222-283)||(18645752-18645813)
chr8 (282-418)||(22272332-22272470)
chr8 (284-390)||(13486137-13486243)
chr8 (283-365)||(34681074-34681156)
chr8 (285-390)||(5036446-5036551)
chr8 (284-403)||(22273861-22273980)
chr8 (284-403)||(41823890-41824009)
chr8 (284-390)||(7745150-7745256)
chr8 (283-343)||(600759-600819)
chr8 (297-409)||(9673184-9673296)
chr8 (284-403)||(5038032-5038150)
chr8 (284-352)||(13484545-13484613)
chr8 (284-403)||(43262107-43262226)
chr8 (294-404)||(31821428-31821538)
chr8 (294-418)||(28433706-28433830)
chr8 (284-403)||(41040720-41040839)
chr8 (330-404)||(11788367-11788441)
chr8 (294-404)||(42897778-42897888)
chr8 (347-404)||(37526027-37526084)
chr8 (294-390)||(462388-462484)
chr8 (294-390)||(32822371-32822467)
chr8 (294-390)||(33160166-33160262)
chr8 (320-404)||(33750388-33750472)
chr8 (330-418)||(40020625-40020713)
chr8 (321-403)||(31201148-31201230)
chr8 (347-404)||(9184446-9184503)
[»] chr7 (54 HSPs)
chr7 (284-418)||(56330-56464)
chr7 (284-418)||(20478042-20478176)
chr7 (284-418)||(27666055-27666189)
chr7 (278-418)||(29996504-29996644)
chr7 (284-403)||(35401969-35402088)
chr7 (284-403)||(35403589-35403708)
chr7 (284-403)||(20479689-20479808)
chr7 (284-418)||(39859219-39859353)
chr7 (283-403)||(77984-78104)
chr7 (287-403)||(27664433-27664549)
chr7 (283-418)||(6602334-6602469)
chr7 (284-403)||(13169653-13169772)
chr7 (284-418)||(37115516-37115650)
chr7 (277-390)||(24228427-24228540)
chr7 (287-418)||(34776905-34777036)
chr7 (284-403)||(47384294-47384413)
chr7 (287-404)||(37796185-37796302)
chr7 (287-403)||(39857648-39857764)
chr7 (284-390)||(38474161-38474267)
chr7 (279-403)||(37113936-37114060)
chr7 (285-344)||(29994907-29994966)
chr7 (283-390)||(30940443-30940550)
chr7 (283-390)||(45359335-45359442)
chr7 (285-403)||(24226582-24226700)
chr7 (284-390)||(47386227-47386333)
chr7 (283-401)||(23904582-23904700)
chr7 (283-399)||(38549546-38549662)
chr7 (284-403)||(22155817-22155936)
chr7 (284-403)||(22211732-22211851)
chr7 (287-401)||(48227913-48228027)
chr7 (306-390)||(13168142-13168229)
chr7 (287-373)||(6605397-6605483)
chr7 (284-403)||(46437107-46437226)
chr7 (283-345)||(23906295-23906357)
chr7 (294-404)||(33038801-33038911)
chr7 (333-404)||(366747-366818)
chr7 (340-391)||(7401949-7402000)
chr7 (288-399)||(35691431-35691542)
chr7 (294-404)||(46996706-46996816)
chr7 (321-418)||(45463707-45463804)
chr7 (293-397)||(13039618-13039722)
chr7 (284-403)||(34774998-34775117)
chr7 (330-390)||(35693388-35693450)
chr7 (284-403)||(45361246-45361365)
chr7 (294-404)||(27955380-27955490)
chr7 (294-386)||(38613503-38613595)
chr7 (294-382)||(47341712-47341800)
chr7 (284-315)||(35693434-35693465)
chr7 (334-404)||(2167529-2167599)
chr7 (294-404)||(23953815-23953925)
chr7 (331-404)||(11682828-11682901)
chr7 (287-336)||(13018036-13018085)
chr7 (330-403)||(35344295-35344368)
chr7 (294-390)||(46812600-46812696)
[»] chr5 (39 HSPs)
chr5 (284-418)||(29621771-29621905)
chr5 (280-418)||(42473597-42473735)
chr5 (287-418)||(40780553-40780684)
chr5 (284-391)||(24541229-24541336)
chr5 (284-414)||(2854321-2854450)
chr5 (284-418)||(17574318-17574452)
chr5 (283-418)||(36057603-36057738)
chr5 (284-403)||(40782181-40782300)
chr5 (282-390)||(7267841-7267949)
chr5 (284-403)||(2852886-2853005)
chr5 (278-373)||(7269446-7269541)
chr5 (284-403)||(21842962-21843081)
chr5 (284-403)||(29620138-29620257)
chr5 (284-390)||(34327635-34327741)
chr5 (284-403)||(12738706-12738825)
chr5 (284-403)||(12801529-12801648)
chr5 (281-403)||(8541241-8541363)
chr5 (284-409)||(2179787-2179912)
chr5 (286-403)||(17577905-17578022)
chr5 (284-390)||(8539675-8539781)
chr5 (284-373)||(30463900-30463989)
chr5 (284-373)||(42471548-42471637)
chr5 (283-418)||(30468270-30468405)
chr5 (287-390)||(18625026-18625129)
chr5 (284-403)||(28813735-28813856)
chr5 (287-403)||(28822060-28822176)
chr5 (284-403)||(34328797-34328916)
chr5 (294-404)||(18728606-18728716)
chr5 (294-375)||(43492131-43492212)
chr5 (294-390)||(38596878-38596974)
chr5 (340-391)||(27075876-27075927)
chr5 (330-404)||(32087560-32087634)
chr5 (294-404)||(35395343-35395453)
chr5 (294-404)||(43318064-43318174)
chr5 (284-373)||(32134231-32134320)
chr5 (287-371)||(41493847-41493931)
chr5 (294-404)||(33256410-33256520)
chr5 (330-391)||(19997164-19997225)
chr5 (284-324)||(28819348-28819388)
[»] chr1 (50 HSPs)
chr1 (284-418)||(9121658-9121792)
chr1 (284-418)||(47013072-47013206)
chr1 (284-418)||(46583546-46583680)
chr1 (287-418)||(33602634-33602765)
chr1 (284-418)||(4855956-4856090)
chr1 (284-418)||(34778128-34778262)
chr1 (284-403)||(46582010-46582129)
chr1 (284-373)||(34776569-34776658)
chr1 (282-403)||(37345932-37346053)
chr1 (284-403)||(8167942-8168061)
chr1 (284-403)||(8169538-8169657)
chr1 (284-403)||(25276742-25276861)
chr1 (284-373)||(26223587-26223676)
chr1 (284-403)||(9120039-9120158)
chr1 (284-403)||(27089249-27089368)
chr1 (284-390)||(31238513-31238619)
chr1 (284-409)||(2869579-2869704)
chr1 (284-403)||(47011456-47011575)
chr1 (284-418)||(6818668-6818802)
chr1 (284-418)||(25278358-25278492)
chr1 (277-386)||(25278975-25279084)
chr1 (281-418)||(37344339-37344476)
chr1 (284-403)||(1444151-1444270)
chr1 (284-390)||(27087283-27087389)
chr1 (283-373)||(4854409-4854499)
chr1 (284-386)||(3013498-3013600)
chr1 (284-409)||(51896151-51896276)
chr1 (284-418)||(50556087-50556221)
chr1 (284-403)||(31236819-31236938)
chr1 (295-401)||(33599229-33599335)
chr1 (284-403)||(52641888-52642007)
chr1 (284-403)||(2871046-2871165)
chr1 (362-418)||(1442599-1442655)
chr1 (287-375)||(52643648-52643736)
chr1 (284-403)||(37088106-37088225)
chr1 (285-399)||(50554164-50554278)
chr1 (284-345)||(33599187-33599248)
chr1 (285-345)||(1442551-1442611)
chr1 (287-403)||(3011858-3011974)
chr1 (285-345)||(6816866-6816926)
chr1 (330-390)||(15104487-15104547)
chr1 (284-364)||(25278854-25278934)
chr1 (287-403)||(51894570-51894686)
chr1 (294-404)||(42134492-42134602)
chr1 (284-373)||(23577636-23577725)
chr1 (284-344)||(45044949-45045009)
chr1 (334-390)||(18183961-18184017)
chr1 (330-390)||(36895528-36895588)
chr1 (347-418)||(5783427-5783498)
chr1 (330-403)||(27940654-27940727)
[»] chr6 (34 HSPs)
chr6 (283-418)||(32455881-32456016)
chr6 (302-418)||(3456766-3456882)
chr6 (284-414)||(13613576-13613706)
chr6 (284-403)||(32518467-32518586)
chr6 (284-403)||(3480627-3480746)
chr6 (284-403)||(32454248-32454367)
chr6 (284-409)||(32439090-32439215)
chr6 (284-403)||(18645074-18645192)
chr6 (285-409)||(20523367-20523491)
chr6 (284-418)||(32516877-32517011)
chr6 (287-409)||(7372957-7373079)
chr6 (288-418)||(10568403-10568533)
chr6 (284-404)||(10569888-10570008)
chr6 (285-409)||(11355223-11355347)
chr6 (284-403)||(13610690-13610808)
chr6 (284-373)||(9400035-9400124)
chr6 (278-403)||(11357164-11357289)
chr6 (284-352)||(32437140-32437208)
chr6 (284-390)||(6899485-6899591)
chr6 (272-403)||(6902868-6902996)
chr6 (284-353)||(7371175-7371244)
chr6 (275-403)||(20525304-20525432)
chr6 (284-345)||(8605353-8605414)
chr6 (299-403)||(14338480-14338584)
chr6 (321-390)||(3018450-3018519)
chr6 (337-418)||(9398713-9398794)
chr6 (287-403)||(21068628-21068744)
chr6 (355-409)||(7049828-7049882)
chr6 (288-345)||(7049790-7049847)
chr6 (321-418)||(17952032-17952129)
chr6 (330-390)||(2968185-2968245)
chr6 (287-322)||(21091109-21091144)
chr6 (294-409)||(35175862-35175977)
chr6 (278-355)||(7051263-7051340)
[»] chr4 (50 HSPs)
chr4 (283-414)||(43519423-43519554)
chr4 (283-403)||(4173710-4173830)
chr4 (284-403)||(43507167-43507286)
chr4 (284-403)||(43508623-43508742)
chr4 (283-403)||(33265980-33266100)
chr4 (284-403)||(319273-319392)
chr4 (284-403)||(5437811-5437930)
chr4 (284-403)||(33264382-33264501)
chr4 (284-403)||(51013856-51013975)
chr4 (287-409)||(41761745-41761867)
chr4 (285-418)||(49523125-49523258)
chr4 (284-403)||(833223-833342)
chr4 (284-403)||(5439617-5439736)
chr4 (284-403)||(320870-320989)
chr4 (284-403)||(835012-835131)
chr4 (284-403)||(4169686-4169805)
chr4 (284-403)||(35401749-35401868)
chr4 (284-409)||(51011926-51012051)
chr4 (275-418)||(41781530-41781673)
chr4 (283-390)||(48813786-48813893)
chr4 (284-403)||(49524703-49524822)
chr4 (294-403)||(39345574-39345683)
chr4 (284-403)||(20493827-20493946)
chr4 (284-390)||(35404463-35404569)
chr4 (289-373)||(43521109-43521193)
chr4 (284-403)||(48645255-48645374)
chr4 (287-400)||(11601674-11601786)
chr4 (278-403)||(11254113-11254238)
chr4 (303-390)||(48646765-48646852)
chr4 (321-418)||(39083676-39083773)
chr4 (333-409)||(42980684-42980760)
chr4 (294-390)||(44558511-44558607)
chr4 (278-396)||(2691368-2691485)
chr4 (321-418)||(5484577-5484674)
chr4 (321-418)||(39189419-39189516)
chr4 (321-418)||(39921531-39921628)
chr4 (321-418)||(43779857-43779954)
chr4 (330-403)||(44794765-44794838)
chr4 (285-395)||(20819986-20820096)
chr4 (347-390)||(27624869-27624912)
chr4 (284-403)||(42982422-42982541)
chr4 (303-390)||(52868167-52868254)
chr4 (330-404)||(35996109-35996183)
chr4 (294-403)||(10372711-10372820)
chr4 (321-418)||(32652136-32652233)
chr4 (321-418)||(44994277-44994374)
chr4 (330-403)||(47941857-47941930)
chr4 (287-375)||(2693285-2693373)
chr4 (348-404)||(2827468-2827524)
chr4 (330-390)||(13450998-13451058)
[»] scaffold0058 (3 HSPs)
scaffold0058 (284-418)||(3294-3428)
scaffold0058 (284-418)||(4466-4600)
scaffold0058 (284-403)||(14313-14432)
[»] chr2 (39 HSPs)
chr2 (284-418)||(6785991-6786125)
chr2 (284-409)||(24208061-24208186)
chr2 (284-418)||(37020508-37020642)
chr2 (279-403)||(24205593-24205717)
chr2 (278-418)||(39664758-39664898)
chr2 (284-403)||(14387349-14387468)
chr2 (284-410)||(16763076-16763202)
chr2 (284-403)||(16764581-16764700)
chr2 (284-409)||(40560223-40560348)
chr2 (284-403)||(37022155-37022274)
chr2 (278-403)||(2577450-2577575)
chr2 (284-409)||(44709764-44709889)
chr2 (284-409)||(14389103-14389228)
chr2 (284-418)||(19908256-19908391)
chr2 (284-403)||(40561848-40561967)
chr2 (279-390)||(2766929-2767040)
chr2 (284-373)||(6783364-6783453)
chr2 (287-390)||(17696209-17696312)
chr2 (283-403)||(39663153-39663273)
chr2 (284-403)||(16376736-16376855)
chr2 (284-396)||(19581414-19581526)
chr2 (287-403)||(19906685-19906801)
chr2 (283-390)||(6797506-6797613)
chr2 (288-390)||(42519243-42519346)
chr2 (284-390)||(39455169-39455275)
chr2 (283-353)||(34400313-34400383)
chr2 (278-403)||(39456750-39456875)
chr2 (321-418)||(11023003-11023100)
chr2 (333-418)||(16377207-16377292)
chr2 (284-325)||(42517558-42517599)
chr2 (298-390)||(37417287-37417379)
chr2 (287-345)||(6799436-6799494)
chr2 (294-404)||(11315339-11315449)
chr2 (330-404)||(26584821-26584895)
chr2 (340-391)||(4046352-4046403)
chr2 (333-404)||(29909664-29909735)
chr2 (294-400)||(361455-361561)
chr2 (287-404)||(37645490-37645607)
chr2 (334-390)||(15432378-15432434)
[»] chr3 (62 HSPs)
chr3 (278-418)||(3152228-3152368)
chr3 (290-418)||(2660218-2660346)
chr3 (284-418)||(44794208-44794341)
chr3 (284-403)||(46308807-46308926)
chr3 (284-418)||(53190769-53190903)
chr3 (284-403)||(38193480-38193599)
chr3 (284-403)||(53094243-53094362)
chr3 (284-403)||(54900044-54900163)
chr3 (283-373)||(41979352-41979442)
chr3 (284-401)||(3150252-3150369)
chr3 (284-409)||(41977750-41977875)
chr3 (284-403)||(38191895-38192014)
chr3 (284-403)||(53187742-53187861)
chr3 (284-390)||(2226190-2226296)
chr3 (284-418)||(27899091-27899225)
chr3 (284-409)||(21348723-21348848)
chr3 (284-403)||(46310406-46310525)
chr3 (284-403)||(46611273-46611392)
chr3 (284-390)||(54898437-54898543)
chr3 (284-373)||(44795890-44795979)
chr3 (284-399)||(46609149-46609264)
chr3 (284-403)||(53092623-53092742)
chr3 (289-401)||(2661880-2661992)
chr3 (327-418)||(19987604-19987695)
chr3 (284-403)||(28626411-28626530)
chr3 (278-373)||(35903819-35903914)
chr3 (283-409)||(30599937-30600063)
chr3 (284-418)||(51684610-51684744)
chr3 (284-403)||(7883328-7883447)
chr3 (284-403)||(23291570-23291689)
chr3 (284-403)||(46112487-46112606)
chr3 (284-390)||(17515310-17515416)
chr3 (284-418)||(23293180-23293314)
chr3 (297-409)||(35905731-35905843)
chr3 (286-390)||(43765139-43765243)
chr3 (284-403)||(611192-611311)
chr3 (285-403)||(2378953-2379071)
chr3 (287-409)||(42279510-42279632)
chr3 (279-403)||(44267976-44268100)
chr3 (287-418)||(2377032-2377163)
chr3 (294-400)||(23774162-23774268)
chr3 (284-403)||(30598337-30598456)
chr3 (284-345)||(7884927-7884988)
chr3 (287-403)||(42282443-42282559)
chr3 (284-400)||(51686367-51686483)
chr3 (283-400)||(48829355-48829472)
chr3 (294-404)||(23888776-23888886)
chr3 (294-404)||(40508915-40509025)
chr3 (294-404)||(48633887-48633997)
chr3 (287-401)||(54412519-54412633)
chr3 (294-390)||(2977347-2977443)
chr3 (340-404)||(25535253-25535317)
chr3 (284-403)||(21350575-21350694)
chr3 (342-404)||(23876982-23877044)
chr3 (294-404)||(45898352-45898462)
chr3 (294-403)||(17516943-17517052)
chr3 (284-364)||(600725-600805)
chr3 (362-418)||(7884883-7884939)
chr3 (284-403)||(46114075-46114195)
chr3 (330-386)||(46197766-46197822)
chr3 (334-404)||(33113184-33113254)
chr3 (294-374)||(41944586-41944666)
[»] scaffold1712 (1 HSPs)
scaffold1712 (284-403)||(982-1101)
[»] scaffold0081 (1 HSPs)
scaffold0081 (284-403)||(54228-54347)
[»] scaffold1454 (1 HSPs)
scaffold1454 (287-418)||(1266-1397)
[»] scaffold0345 (1 HSPs)
scaffold0345 (278-403)||(1525-1650)
[»] scaffold0564 (1 HSPs)
scaffold0564 (286-375)||(8264-8353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (291-355)||(436272-436336)


Alignment Details
Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 280 - 416
Target Start/End: Original strand, 27691150 - 27691286
Alignment:
Q  280 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27691150 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaga 27691249  T
Q  380 cgtccatcaaatcagtccctccgtctaaaatgtccgt 416  Q
    ||||||||||||| ||||||||||| |||| ||||||    
T  27691250 cgtccatcaaatccgtccctccgtccaaaaggtccgt 27691286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 418
Target Start/End: Complemental strand, 27407044 - 27406907
Alignment:
Q  281 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 380  Q
    |||||||||||||||||| | |||||||||||||||||||| ||| |||||||||| |||||| |||||||||| ||| |||||||||||||||||||||    
T  27407044 aaggactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagac 27406945  T
Q  381 gtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  27406944 gtccatcaaatcagtctctccgtccaaaatgtccgtta 27406907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 277 - 418
Target Start/End: Complemental strand, 33708954 - 33708814
Alignment:
Q  277 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 376  Q
    |||| |||||||||||||||||||| |||||||||||| ||||| |||  ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  33708954 taaataggactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttac 33708856  T
Q  377 agacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    | |||||||||||||| ||||||||||| |||| ||||||||    
T  33708855 aaacgtccatcaaatctgtccctccgtccaaaaggtccgtta 33708814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 601793 - 601674
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  601793 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 601694  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  601693 aatcaaattagtccctccgt 601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 284 - 409
Target Start/End: Complemental strand, 13108480 - 13108355
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| |||||||||||||||||||||| |||||||||| || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    |||||||   ||||||||||| ||||    
T  13108380 catcaaaatggtccctccgtccaaaa 13108355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 302 - 418
Target Start/End: Original strand, 15305815 - 15305931
Alignment:
Q  302 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 401  Q
    |||||||||||||||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  402 gtctaaaatgtccgtta 418  Q
    ||| ||||| |||||||    
T  15305915 gtccaaaatatccgtta 15305931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 302 - 418
Target Start/End: Original strand, 15486184 - 15486300
Alignment:
Q  302 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 401  Q
    |||||||||||||||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  402 gtctaaaatgtccgtta 418  Q
    ||| ||||| |||||||    
T  15486284 gtccaaaatatccgtta 15486300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 279 - 403
Target Start/End: Complemental strand, 33762807 - 33762683
Alignment:
Q  279 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 378  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   |     
T  33762807 aaaatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaa 33762708  T
Q  379 acgtccatcaaatcagtccctccgt 403  Q
    | ||| ||||||||| |||||||||    
T  33762707 atgtcaatcaaatcaatccctccgt 33762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 8609931 - 8609797
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||| |||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 8609832  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  8609831 catcaaaatggtccctccgtccaaaagctccgtta 8609797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 13282478 - 13282612
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  13282478 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 13282577  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  13282578 catcaaaatggtccctccgtccaaaagctccgtta 13282612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 29237151 - 29237240
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 29239276 - 29239187
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  29239276 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 276 - 403
Target Start/End: Original strand, 8608229 - 8608357
Alignment:
Q  276 ataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctg-aatttttcgaaatatcaaattagtccctgaatttt 374  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||     
T  8608229 ataaaaaggactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattta 8608328  T
Q  375 acagacgtccatcaaatcagtccctccgt 403  Q
      | | ||| |||||||||||||||||||    
T  8608329 taaaatgtcaatcaaatcagtccctccgt 8608357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 27692926 - 27692807
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtc 27692827  T
Q  384 catcaaatcagtccctccgt 403  Q
     || ||||||||||||||||    
T  27692826 aattaaatcagtccctccgt 27692807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 33761069 - 33761188
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33761168  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  33761169 aatcaaatcagtccctccgt 33761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 38548920 - 38548801
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | |  ||    
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttc 38548821  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  38548820 aatcaaatcagtccctccgt 38548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 285 - 403
Target Start/End: Original strand, 33707207 - 33707325
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 384  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||     
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtca 33707306  T
Q  385 atcaaatcagtccctccgt 403  Q
    |||||||||||| ||||||    
T  33707307 atcaaatcagtcactccgt 33707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 38547228 - 38547334
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||| |||||||||||||||| |||||||||| || | ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 38547327  T
Q  384 catcaaa 390  Q
    |||||||    
T  38547328 catcaaa 38547334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 35509214 - 35509333
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35509313  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||||||||| |||||    
T  35509314 aatcaaatcagtccatccgt 35509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 35510908 - 35510789
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||  ||||||||||||||||||||||||||   | | |||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 35510809  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  35510808 aatcaaatcagtccctccgt 35510789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 287 - 418
Target Start/End: Original strand, 42941777 - 42941908
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||  |||||||  | ||||||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  387 caaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||  |||||||||||| ||||| |||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgtta 42941908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 13106804 - 13106893
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 15308350 - 15308261
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 15488719 - 15488630
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 287 - 403
Target Start/End: Complemental strand, 13284081 - 13283965
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||   | | ||| ||    
T  13284081 taataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaat 13283982  T
Q  387 caaatcagtccctccgt 403  Q
    |||||||||||||||||    
T  13283981 caaatcagtccctccgt 13283965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 42943515 - 42943396
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 42943416  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  42943415 aatcaaatcagtccctccgt 42943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 26238726 - 26238845
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||| | |||||||  ||||||   | | |||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 26238825  T
Q  384 catcaaatcagtccctccgt 403  Q
    ||||||||||||||||||||    
T  26238826 catcaaatcagtccctccgt 26238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 287 - 418
Target Start/End: Complemental strand, 26242455 - 26242324
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    ||||||||||| ||||| |||||||||| ||||||| || || ||||||||| |||||| ||||||||| | |||||| |||||||||||||||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccat 26242356  T
Q  387 caaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||   ||||||||||| ||||  |||||||    
T  26242355 caaaatggtccctccgtccaaaagctccgtta 26242324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 41825785 - 41825682
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||||||||||||| |||||||    || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  387 caaa 390  Q
    ||||    
T  41825685 caaa 41825682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 41042728 - 41042594
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||| |||| |||||||||||||| |||||| ||| || || |||||||||||||  |||||||| | |||||||||||||||||||| ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgtta 41042594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 18645752 - 18645813
Alignment:
Q  222 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18645752 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 18645813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 418
Target Start/End: Original strand, 22272332 - 22272470
Alignment:
Q  282 aggactaatacctcaaattcgtccttgaattttgaaaaa--tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 379  Q
    ||||||||||||||||||||||| ||||||||| |||||  || |  || |||||||||||||||| || |||||| | ||||||||||||||||||| |    
T  22272332 aggactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaa 22272431  T
Q  380 cgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||||||  ||||||||| || ||||  |||||||    
T  22272432 cgtccatcaaaatagtccctccatccaaaagctccgtta 22272470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 13486243 - 13486137
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| || |||||||||| |||||||||  |  |||||| ||| ||||| ||||||||| | |||||||||||||||||||||||||    
T  13486243 gactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtc 13486144  T
Q  384 catcaaa 390  Q
    |||||||    
T  13486143 catcaaa 13486137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 365
Target Start/End: Complemental strand, 34681156 - 34681074
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtcc 365  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||    
T  34681156 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 390
Target Start/End: Original strand, 5036446 - 5036551
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 384  Q
    ||||||||||||||||||||||| |||||| ||||||| |  || ||||||||||||||||  |||||||| | ||||||| |||||||||||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  385 atcaaa 390  Q
    ||||||    
T  5036546 atcaaa 5036551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 22273980 - 22273861
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || || ||| ||||||||| | ||||||| | |||||||||||||||   | | |||    
T  22273980 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaatgtc 22273881  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  22273880 aatcaaatcagtccctccgt 22273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 41823890 - 41824009
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||| ||||||||||||||||||| ||||||| || |||||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||     
T  41823890 gactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtt 41823989  T
Q  384 catcaaatcagtccctccgt 403  Q
    ||||||||||||||||||||    
T  41823990 catcaaatcagtccctccgt 41824009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 7745256 - 7745150
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| |||||||||||| ||||||||| ||||||| || || |||||| ||||||||| ||||||||  | |||||||||| ||||||||||| ||    
T  7745256 gactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatc 7745157  T
Q  384 catcaaa 390  Q
    |||||||    
T  7745156 catcaaa 7745150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 600759 - 600819
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatt 343  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  600759 ggactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 409
Target Start/End: Complemental strand, 9673296 - 9673184
Alignment:
Q  297 aattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 396  Q
    ||||||||||||||| || |  |||  || || ||||||||||||||||  |||||||| | ||| ||||||||||||||||||||||||||||   |||    
T  9673296 aattcgtccttgaatcttcatcaattagctaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtc 9673197  T
Q  397 cctccgtctaaaa 409  Q
    |||||||||||||    
T  9673196 cctccgtctaaaa 9673184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 5038150 - 5038032
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| ||||||||| |||||||||  || ||||| | |||||||| ||||||| | | |||||||||||||||   | | |||    
T  5038150 gactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttacaaaatgtc 5038052  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  5038051 aatcaaatcagtccctccgt 5038032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 13484545 - 13484613
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaat 352  Q
    ||||||| ||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||    
T  13484545 gactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaat 13484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 43262226 - 43262107
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||| |||||| ||||||| || || |||| |||| |||||| ||||||||| | |||||||  ||||||   | | |||    
T  43262226 gactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 43262127  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||| ||||||    
T  43262126 aatcaaatcagtctctccgt 43262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 31821428 - 31821538
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||||||||| |||||||| | |  ||||  || ||||||||| |||| | ||||||||||| |||||||| ||||||  |||||||||||||||       
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  31821528 gtccctccgtc 31821538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 28433830 - 28433706
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||| ||||||| |||||||| ||  |||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||| | |      
T  28433830 tcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttc 28433731  T
Q  394 gtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||| |||| || |||||    
T  28433730 gtccctccgtccaaaaggttcgtta 28433706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 41040720 - 41040839
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| || |||||  ||||||||| | ||||| | | || |||| |||||||   | | |||    
T  41040720 gactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaatttacaaaatgtc 41040819  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||| ||||||||||    
T  41040820 aatcaaatcggtccctccgt 41040839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 11788367 - 11788441
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    ||||||||  ||||| ||||||||||||||| ||||  |||||| |||||||||||||||||   ||||||||||    
T  11788367 ttcgtcccctaatttatcgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtc 11788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 42897888 - 42897778
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||| |||||||||||||| |    ||||| || ||||||||| |||| |  |||||||||| ||||||| |||||||  |||||||||||||||       
T  42897888 tcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaag 42897789  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  42897788 gtccctccgtc 42897778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 404
Target Start/End: Complemental strand, 37526084 - 37526027
Alignment:
Q  347 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||   |||||||||||    
T  37526084 cgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtc 37526027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 462484 - 462388
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||||||| ||||||||| | | |||||| || ||| ||| | |||| | ||||||||||| ||||||| |||||||  || ||||||||||||    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaa 462388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 32822371 - 32822467
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    |||| |||||||||||||||| |   |||||| || ||| ||||| |||| ||  ||||||||| |||||||||||||||  |||| ||||||||||    
T  32822371 tcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaa 32822467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 33160262 - 33160166
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||||||||||||||||| | |  ||||| || ||| ||||| |||| |  |||||||||| |||||| ||||||||  |||||| ||||||||    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaa 33160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 404
Target Start/End: Complemental strand, 33750472 - 33750388
Alignment:
Q  320 atcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    |||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  ||||| | |||||||   |||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtc 33750388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 40020713 - 40020625
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  40020713 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 40020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 403
Target Start/End: Complemental strand, 31201230 - 31201148
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 403  Q
    ||||| || ||||||| | |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 9184446 - 9184503
Alignment:
Q  347 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    |||||||||||||||||||||||||||  |||||||| ||| ||   |||||||||||    
T  9184446 cgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtc 9184503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 56330 - 56464
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||| ||| |||||||||| |||||||| ||||    
T  56430 catcaattcactccctccgtccaaaatgtctgtta 56464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 20478042 - 20478176
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||||||||||| |||||||||||||    
T  20478142 catcaaatcagtccctccgtccaaaatgtccgtta 20478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 27666189 - 27666055
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 27666090  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||| ||||||||||| |||| | ||||||    
T  27666089 catcaaatccgtccctccgtccaaaaggcccgtta 27666055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 278 - 418
Target Start/End: Complemental strand, 29996644 - 29996504
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 377  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  29996644 aaaaacgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttaca 29996545  T
Q  378 gacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||||  |||||||| || |||| ||||||||    
T  29996544 gacgtccatcaaattcgtccctccatccaaaaggtccgtta 29996504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 35401969 - 35402088
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35401969 gactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35402068  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  35402069 aatcaaatcagtccctccgt 35402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 35403708 - 35403589
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35403609  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  35403608 aatcaaatcagtccctccgt 35403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 20479808 - 20479689
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  20479808 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 20479709  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  20479708 aatcaaattagtccctccgt 20479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 39859353 - 39859219
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | ||||||| |||||||||||||||||    
T  39859353 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 39859254  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    | |||||   ||||||||||| ||||  |||||||    
T  39859253 cgtcaaaatggtccctccgtccaaaagctccgtta 39859219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 283 - 403
Target Start/End: Complemental strand, 78104 - 77984
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||   | | |     
T  78104 ggactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgc 78005  T
Q  383 ccatcaaatcagtccctccgt 403  Q
    | |||||||||||||||||||    
T  78004 caatcaaatcagtccctccgt 77984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 27664433 - 27664549
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||   | | ||| ||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaat 27664532  T
Q  387 caaatcagtccctccgt 403  Q
    |||||||||||||||||    
T  27664533 caaatcagtccctccgt 27664549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 283 - 418
Target Start/End: Original strand, 6602334 - 6602469
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||| |||||||||| ||||||||||| |||||||||| ||  |  |||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  6602334 ggactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 6602433  T
Q  383 ccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||   ||||||||||| ||||  |||||||    
T  6602434 ccatcaaaatggtccctccgtccaaaagctccgtta 6602469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 13169772 - 13169653
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 13169673  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  13169672 aatcaaatcagtccctccgt 13169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 37115650 - 37115516
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| ||||||||| ||||||| |  || ||||| |||||||||| | ||||||| | ||||| |||||||||||||||||||    
T  37115650 gactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtc 37115551  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||  |||||||||||| ||||  |||||||    
T  37115550 catcaaaatagtccctccgtccaaaagctccgtta 37115516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 277 - 390
Target Start/End: Complemental strand, 24228540 - 24228427
Alignment:
Q  277 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 376  Q
    |||||| || ||||||||||| ||||| |||||||||| |||||| ||| || |||||||||||||||| ||||||||| | |||||| |||||||||||    
T  24228540 taaaaatgattaatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttac 24228441  T
Q  377 agacgtccatcaaa 390  Q
    ||||||||||||||    
T  24228440 agacgtccatcaaa 24228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 287 - 418
Target Start/End: Complemental strand, 34777036 - 34776905
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    ||||||||||||||||| ||| |||||| |||||| ||| || ||| | |||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  387 caaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||   ||||||||||| ||||  |||||||    
T  34776936 caaaatggtccctccgtccaaaaactccgtta 34776905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 47384294 - 47384413
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||||||||||  || || ||||||| |||||||| ||||||||| |||||||||| ||||||   | | |||    
T  47384294 gactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgtc 47384393  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  47384394 aatcaaatcagtccctccgt 47384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 404
Target Start/End: Complemental strand, 37796302 - 37796185
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||| ||||||||||||| ||||||| || || |||||||   |||||| ||||||||| | |||||||||||||||||| |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  387 caaatcagtccctccgtc 404  Q
    ||||  ||||||||||||    
T  37796202 caaaatagtccctccgtc 37796185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 39857648 - 39857764
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||| ||||||   | | ||| ||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaat 39857747  T
Q  387 caaatcagtccctccgt 403  Q
    |||||||||||||||||    
T  39857748 caaatcagtccctccgt 39857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 38474267 - 38474161
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| ||||| ||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  384 catcaaa 390  Q
     ||||||    
T  38474167 tatcaaa 38474161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 403
Target Start/End: Original strand, 37113936 - 37114060
Alignment:
Q  279 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 378  Q
    |||| ||||||||||||||||||||||||||||||| |||||| ||  || ||| |||||||||||| ||||||||| | ||||||||| |||||   |     
T  37113936 aaaaagactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaa 37114035  T
Q  379 acgtccatcaaatcagtccctccgt 403  Q
    | ||| |||||||||||||||||||    
T  37114036 atgtcaatcaaatcagtccctccgt 37114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 344
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattt 344  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 390
Target Start/End: Complemental strand, 30940550 - 30940443
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||| ||||| || |||||||||| |||||||||| || |||||| || |||||| ||||||||| | ||||||||||||||||||| ||||    
T  30940550 ggactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgt 30940451  T
Q  383 ccatcaaa 390  Q
     |||||||    
T  30940450 tcatcaaa 30940443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 390
Target Start/End: Original strand, 45359335 - 45359442
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||| ||||| |||| |||||||| |||||||||  || | ||||| |||||||| ||||||||| | ||||||| ||||||||||||||||    
T  45359335 ggactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgt 45359434  T
Q  383 ccatcaaa 390  Q
    ||||||||    
T  45359435 ccatcaaa 45359442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 403
Target Start/End: Original strand, 24226582 - 24226700
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 384  Q
    |||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||| ||||||| | | || |||| |||||||   | | |||     
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtca 24226681  T
Q  385 atcaaatcagtccctccgt 403  Q
    |||||||||||||||||||    
T  24226682 atcaaatcagtccctccgt 24226700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 47386333 - 47386227
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||| |||||| ||||||| |  || ||||||| |||||||| ||||||||  | |||||| || |||||||||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtc 47386234  T
Q  384 catcaaa 390  Q
    |||||||    
T  47386233 catcaaa 47386227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 401
Target Start/End: Original strand, 23904582 - 23904700
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||||||||||||||||||||||| |||||||||  || |||||| ||||||||| | ||||| | | ||||||| |||||||   | | ||    
T  23904582 ggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgt 23904681  T
Q  383 ccatcaaatcagtccctcc 401  Q
    | |||||||||||||||||    
T  23904682 caatcaaatcagtccctcc 23904700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 38549546 - 38549662
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||| ||||||||||||||||||| ||||||| || || ||||||||||||||||  |||||||| | ||| |||  ||||||   | | ||    
T  38549546 ggactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgt 38549645  T
Q  383 ccatcaaatcagtccct 399  Q
    |||||||||||||||||    
T  38549646 ccatcaaatcagtccct 38549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 22155936 - 22155817
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||| || |||||||||||||||| |||||||||| || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22155936 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22155837  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  22155836 aatcaaatcagtccctccgt 22155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 22211851 - 22211732
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||| || |||||||||||||||| |||||||||| || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22211851 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22211752  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  22211751 aatcaaatcagtccctccgt 22211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 48228027 - 48227913
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||| ||||||||| |||||||||  || ||||||  |||||||| ||||||||| | || ||||||||||||   | | ||| ||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaat 48227928  T
Q  387 caaatcagtccctcc 401  Q
    |||||||||||||||    
T  48227927 caaatcagtccctcc 48227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 13168142 - 13168229
Alignment:
Q  306 ttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccct---gaattttacagacgtccatcaaa 390  Q
    ||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||   |||||||||||||||||||||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaa 13168229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||| || |||||||||| ||||||| | | |||||||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaattt-gttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 46437107 - 46437226
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||  |||||||| ||||||| | | || |||| |||||||   | | |||    
T  46437107 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 46437206  T
Q  384 catcaaatcagtccctccgt 403  Q
     | |||||||||||||||||    
T  46437207 aaccaaatcagtccctccgt 46437226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 23906357 - 23906295
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 345  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || ||||||||| ||||||    
T  23906357 ggactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 33038911 - 33038801
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    ||||||||||||||||||||| |    ||||  || ||| ||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||       
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  33038811 gtccctccgtc 33038801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 366747 - 366818
Alignment:
Q  333 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    |||||| | ||||| |||||||||||||||||||||||||| ||||||||| |||||||   ||||||||||    
T  366747 gtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtc 366818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 7401949 - 7402000
Alignment:
Q  340 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 391  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  7401949 aatttatcgaaatatcaaattcgtccctgaatttaacagacgtccatcaaat 7402000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 399
Target Start/End: Original strand, 35691431 - 35691542
Alignment:
Q  288 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatc 387  Q
    ||||||||||||||||||||||||||| |||||||||  || |||||| || |||||| ||||||| | | || |||| |||||||   | | ||| |||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 35691530  T
Q  388 aaatcagtccct 399  Q
    ||||||||||||    
T  35691531 aaatcagtccct 35691542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 46996816 - 46996706
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||||||||| |||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||       
T  46996816 tcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaag 46996717  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  46996716 gtccctccgtc 46996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 45463707 - 45463804
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  45463707 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 45463804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 397
Target Start/End: Complemental strand, 13039722 - 13039618
Alignment:
Q  293 ctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatc 392  Q
    ||||| |||||||||||||||| |||||||    || ||||||||| |||||| ||||||| | | ||||||||||||||||  | | ||| ||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatc 13039623  T
Q  393 agtcc 397  Q
    |||||    
T  13039622 agtcc 13039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 34774998 - 34775117
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| |||||||||||| ||||||||| |||||||||  || ||| | | |||||||| | ||||| | | |||||||||||||||   | |  ||    
T  34774998 gactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatttacaaaatatc 34775097  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  34775098 aatcaaatcagtccctccgt 34775117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 35693450 - 35693388
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatca--aattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||| |||||||| || ||||||   ||||||||||||||||||||||||||||||||||    
T  35693450 ttcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaa 35693388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 45361365 - 45361246
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||| |||||||||||| |||||| ||  ||||| || |||||||||| | |||||   | ||||||| |||| ||   | | |||    
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaacttacaaaatgtc 45361266  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  45361265 aatcaaatcagtccctccgt 45361246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 27955380 - 27955490
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    ||||||||||||||||||||| |   ||| || || ||| ||||| |||||| ||||||||||| ||| |  ||||||||  |||||||||||||||       
T  27955380 tcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagag 27955479  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  27955480 gtccctccgtc 27955490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 386
Target Start/End: Complemental strand, 38613595 - 38613503
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||| |||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||    
T  38613595 tcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 38613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 47341800 - 47341712
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 47341712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 315
Target Start/End: Complemental strand, 35693465 - 35693434
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttg 315  Q
    ||||||||||||||||||||||||||||||||    
T  35693465 gactaatacctcaaattcgtccttgaattttg 35693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 2167529 - 2167599
Alignment:
Q  334 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||| ||||||||   |||||||||||    
T  2167529 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtc 2167599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 23953815 - 23953925
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||||||||||| |||||| |    |||| ||| ||||||| | |||| | ||||||||||| ||||||| |||||||  |||||||| ||||||       
T  23953815 tcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaag 23953914  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  23953915 gtccctccgtc 23953925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 11682828 - 11682901
Alignment:
Q  331 tcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    |||||||| |||| | | ||||||||||||||||| ||||||    ||||||||||||| | ||||||||||||    
T  11682828 tcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtc 11682901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 13018036 - 13018085
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtcc 336  Q
    ||||||||||||||| |||||||||||| ||||||| || || |||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcc 13018085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 35344368 - 35344295
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 403  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||||   ||||||||||    
T  35344368 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 46812696 - 46812600
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    |||| |||||||||||||||| |  | ||||| || ||| ||||| ||||    |||||||||| ||||||||| |||||  |||||||||||||||    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaa 46812600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 7e-56; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 29621905 - 29621771
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29621905 gactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 29621806  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||||||||||| |||||||||||||    
T  29621805 catcaaatcagtccctccgtccaaaatgtccgtta 29621771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 280 - 418
Target Start/End: Complemental strand, 42473735 - 42473597
Alignment:
Q  280 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 379  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  42473735 aaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacaga 42473636  T
Q  380 cgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  42473635 cgtccatcaaatcagtccttccgtccaaaatgtccgtta 42473597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 287 - 418
Target Start/End: Original strand, 40780553 - 40780684
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  387 caaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||||||||||||| |||||||||||||    
T  40780653 caaatcagtccctccgtccaaaatgtccgtta 40780684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 24541336 - 24541229
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 24541237  T
Q  384 catcaaat 391  Q
    ||||||||    
T  24541236 catcaaat 24541229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 284 - 414
Target Start/End: Complemental strand, 2854450 - 2854321
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2854450 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtc 2854352  T
Q  384 catcaaatcagtccctccgtctaaaatgtcc 414  Q
    || |||||  ||||||||||| |||| ||||    
T  2854351 caacaaattcgtccctccgtccaaaaggtcc 2854321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 17574318 - 17574452
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 17574417  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  17574418 catcaaaatggtccctccgtccaaaagctccgtta 17574452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 283 - 418
Target Start/End: Complemental strand, 36057738 - 36057603
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||| |||||||||||||||||||    
T  36057738 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgt 36057639  T
Q  383 ccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||   ||||||||||| ||||  |||||||    
T  36057638 ccatcaaaatggtccctccgtccaaaagctccgtta 36057603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 40782300 - 40782181
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 40782201  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  40782200 aatcaaattagtccctccgt 40782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 282 - 390
Target Start/End: Original strand, 7267841 - 7267949
Alignment:
Q  282 aggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 381  Q
    ||||||||||||||||||||||||||||||||| |||||||| | || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||    
T  7267841 aggactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacg 7267940  T
Q  382 tccatcaaa 390  Q
    |||||||||    
T  7267941 tccatcaaa 7267949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 2852886 - 2853005
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  2852886 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 2852985  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  2852986 aatcaaatcagtccctccgt 2853005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 278 - 373
Target Start/End: Complemental strand, 7269541 - 7269446
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7269541 aaaaatgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 21843081 - 21842962
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  21843081 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 21842982  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  21842981 aatcaaatcagtccctccgt 21842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 29620138 - 29620257
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||   | | |||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtc 29620237  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  29620238 aatcaaattagtccctccgt 29620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 34327635 - 34327741
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||  ||||| ||| || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||||    
T  34327635 gactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 34327734  T
Q  384 catcaaa 390  Q
    |||||||    
T  34327735 catcaaa 34327741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 12738825 - 12738706
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12738726  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  12738725 aatcaaatcagtccctccgt 12738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 12801648 - 12801529
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12801549  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  12801548 aatcaaatcagtccctccgt 12801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 281 - 403
Target Start/End: Complemental strand, 8541363 - 8541241
Alignment:
Q  281 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 380  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||| |||||||   | |     
T  8541363 aaggactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaat 8541264  T
Q  381 gtccatcaaatcagtccctccgt 403  Q
    ||| |||||||||||||||||||    
T  8541263 gtcaatcaaatcagtccctccgt 8541241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 2179787 - 2179912
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| ||||||||||||| |||||||||  || ||||||||||||||||  |||||||| | ||| |||||||||||||||||| ||    
T  2179787 gactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatc 2179886  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    |||||||   ||||||||||| ||||    
T  2179887 catcaaaatggtccctccgtccaaaa 2179912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 286 - 403
Target Start/End: Complemental strand, 17578022 - 17577905
Alignment:
Q  286 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 385  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| | ||||||||||||||| | |||||||   | | ||| |    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaa 17577923  T
Q  386 tcaaatcagtccctccgt 403  Q
    ||||||||||||||||||    
T  17577922 tcaaatcagtccctccgt 17577905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 8539675 - 8539781
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||    || ||||| | |||||||| ||||||||| | ||||||||||||||||||| |||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 8539774  T
Q  384 catcaaa 390  Q
    |||||||    
T  8539775 catcaaa 8539781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 42471548 - 42471637
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| | |||||||    
T  42471548 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacatgaattt 42471637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 418
Target Start/End: Complemental strand, 30468405 - 30468270
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||| ||||||||| |||||||||||||||| |||||| ||  || |||||| || |||||| ||||||||| | ||||||| ||||||||||||||||    
T  30468405 ggactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgt 30468306  T
Q  383 ccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||   ||||||||||| ||||  |||||||    
T  30468305 ccatcaaaatggtccctccgtccaaaagctccgtta 30468270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 18625129 - 18625026
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||||||  |||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 18625030  T
Q  387 caaa 390  Q
    ||||    
T  18625029 caaa 18625026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 28813856 - 28813735
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaa--tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 381  Q
    ||||||||||||||||||||||||||||||  |||||  | ||| || ||||||| |||||||| ||||||||| | |||||||||||||||   | | |    
T  28813856 gactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatttacaaaatg 28813757  T
Q  382 tccatcaaatcagtccctccgt 403  Q
    |  |||||||||||||||||||    
T  28813756 taaatcaaatcagtccctccgt 28813735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 403
Target Start/End: Complemental strand, 28822176 - 28822060
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||||||||||||| |||||| ||  || |||||||||||||||| ||||||  | | || |||| |||||||   | | ||| ||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaat 28822077  T
Q  387 caaatcagtccctccgt 403  Q
    |||||||||||||||||    
T  28822076 caaatcagtccctccgt 28822060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 34328916 - 34328797
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||  || ||||||| |||||||| | ||||| | | || |||| |||||||   | | |||    
T  34328916 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaatgtc 34328817  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||| ||||||    
T  34328816 aatcaaatcagtcgctccgt 34328797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 18728716 - 18728606
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||||||||| |||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  18728716 tcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 18728617  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  18728616 gtccctccgtc 18728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 375
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 375  Q
    |||||||||| ||| |||||| ||||||| || || ||| |||||||||||| ||||||||| | |||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 390
Target Start/End: Original strand, 38596878 - 38596974
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||||||||||||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||   ||||||||||||||    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaa 38596974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 27075876 - 27075927
Alignment:
Q  340 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 391  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaat 27075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 32087560 - 32087634
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    ||||||||| |||| | ||||||||||| ||||||||| |||||| |||||||||||||||   |||||||||||    
T  32087560 ttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtc 32087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 35395343 - 35395453
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||||| ||| |||||||| | |  ||||| || ||||||||| |||| | ||||||||||| ||||| |||||||||   ||||||||||||||       
T  35395343 tcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaag 35395442  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  35395443 gtccctccgtc 35395453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 43318174 - 43318064
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    ||||||||||||||||||||| |    ||||| ||  || ||||| |||| | ||||||||||| |||||||||||||||  ||||||||||| |||       
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  43318074 gtccctccgtc 43318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 32134231 - 32134320
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||||||||||| ||| ||||||||| |||||||  | || ||||||  ||||||||   ||||||| | |||||||||||||||    
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 371
Target Start/End: Original strand, 41493847 - 41493931
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaat 371  Q
    ||||||||||| |||||||||||||||| ||||||| || || |||||||   ||||||  |||||||| | ||||||| |||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 33256410 - 33256520
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||||||||| |||||||| | |  ||||| || ||| ||| | |||| | ||||||||||| ||| ||  |||||||  |||||||||||||||  |    
T  33256410 tcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaa 33256509  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  33256510 gtccctccgtc 33256520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 19997164 - 19997225
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 391  Q
    ||||||||  |||||||| ||||||||||||| | ||||||||| |||||| | ||||||||    
T  19997164 ttcgtccccaaatttttcaaaatatcaaattacttcctgaatttaacagacattcatcaaat 19997225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 28819348 - 28819388
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcgg 324  Q
    ||||||||| |||||||| |||||||||||| |||||||||    
T  28819348 gactaatacatcaaattcctccttgaatttttaaaaatcgg 28819388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 7e-56; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 9121792 - 9121658
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9121792 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 9121693  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||||||||||| |||||||||||||    
T  9121692 catcaaatcagtccctccgtccaaaatgtccgtta 9121658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 47013206 - 47013072
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47013206 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtc 47013107  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||||||||||| |||||||||||||    
T  47013106 catcaaatcagtccctccgtccaaaatgtccgtta 47013072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 46583680 - 46583546
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 46583581  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||  ||||||||||| |||| ||||||||    
T  46583580 catcaaatttgtccctccgtccaaaaggtccgtta 46583546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 287 - 418
Target Start/End: Complemental strand, 33602765 - 33602634
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  387 caaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| |||||||||||| |||| ||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgtta 33602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 4856090 - 4855956
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4855991  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  4855990 catcaaaatggtccctccgtccaaaagctccgtta 4855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 34778262 - 34778128
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  34778262 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtc 34778163  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  34778162 catcaaaatggtccctccgtccaaaagctccgtta 34778128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 46582010 - 46582129
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46582010 gactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46582109  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  46582110 aatcaaatcagtccctccgt 46582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 37346053 - 37345932
Alignment:
Q  282 aggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 381  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||   | | |    
T  37346053 aggactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 37345954  T
Q  382 tccatcaaatcagtccctccgt 403  Q
    || |||||||||||||||||||    
T  37345953 tcaatcaaatcagtccctccgt 37345932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 8167942 - 8168061
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |   | | |||    
T  8167942 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtc 8168041  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  8168042 aatcaaatcagtccctccgt 8168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 8169657 - 8169538
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtc 8169558  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||||| |||||||||    
T  8169557 aatcaaatcaatccctccgt 8169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 25276742 - 25276861
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 25276841  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  25276842 aatcaaatcagtccctccgt 25276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 26223587 - 26223676
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 9120039 - 9120158
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 9120138  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  9120139 aatcaaattagtccctccgt 9120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 27089368 - 27089249
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||   | | |||    
T  27089368 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtc 27089269  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||||||||| |||||    
T  27089268 aatcaaatcagtccttccgt 27089249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 31238619 - 31238513
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 31238520  T
Q  384 catcaaa 390  Q
    |||||||    
T  31238519 catcaaa 31238513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 2869579 - 2869704
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||| || |||||||||||||||    
T  2869579 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtc 2869678  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    |||||||   ||||||||||| ||||    
T  2869679 catcaaaatggtccctccgtccaaaa 2869704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 47011456 - 47011575
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtc 47011555  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||| |||||||||||||    
T  47011556 aatcaactcagtccctccgt 47011575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 6818802 - 6818668
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||| ||||  | ||||||| | |||||||||||||||||||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtc 6818703  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  6818702 catcaaaatggtccctccgtccaaaagctccgtta 6818668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 25278492 - 25278358
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| | | ||||||| ||||||||||| |||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtc 25278393  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  25278392 catcaaaatggtccctccgtccaaaagctccgtta 25278358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 277 - 386
Target Start/End: Complemental strand, 25279084 - 25278975
Alignment:
Q  277 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 376  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| || || ||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  25279084 taaaaatgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttac 25278985  T
Q  377 agacgtccat 386  Q
    ||||||||||    
T  25278984 agacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 281 - 418
Target Start/End: Original strand, 37344339 - 37344476
Alignment:
Q  281 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 380  Q
    |||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| | | ||||||  ||||||||||| ||    
T  37344339 aaggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatac 37344438  T
Q  381 gtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||   ||||||||||| ||||  |||||||    
T  37344439 gtccatcaaaatggtccctccgtccaaaagctccgtta 37344476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 1444270 - 1444151
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||   | | |||    
T  1444270 gactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgtc 1444171  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  1444170 aatcaaattagtccctccgt 1444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 27087283 - 27087389
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 27087381  T
Q  383 ccatcaaa 390  Q
    ||||||||    
T  27087382 ccatcaaa 27087389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 4854409 - 4854499
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    |||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  4854409 ggactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 386
Target Start/End: Complemental strand, 3013600 - 3013498
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| ||| ||| |  || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtc 3013501  T
Q  384 cat 386  Q
    |||    
T  3013500 cat 3013498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 409
Target Start/End: Complemental strand, 51896276 - 51896151
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||| ||||||||||| ||||||| |||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||| ||    
T  51896276 gactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacagatgt 51896178  T
Q  383 ccatcaaatcagtccctccgtctaaaa 409  Q
    ||||||||  |||||||||||| ||||    
T  51896177 ccatcaaaatagtccctccgtccaaaa 51896151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 50556221 - 50556087
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| |||||||||||| ||||||||| ||||||| |  || |||||| ||||||||| ||||||||| | ||||||||| |||||||||||||||    
T  50556221 gactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtc 50556122  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
     ||||||   ||||||||||| ||||  |||||||    
T  50556121 tatcaaaatggtccctccgtccaaaagctccgtta 50556087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 31236819 - 31236938
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||| | ||||| |||||||||   | |  |    
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagttcctgaatttacaaaatat 31236917  T
Q  383 ccatcaaatcagtccctccgt 403  Q
    | |||||||||||||||||||    
T  31236918 caatcaaatcagtccctccgt 31236938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 401
Target Start/End: Original strand, 33599229 - 33599335
Alignment:
Q  295 caaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcag 394  Q
    ||||||||||||||||||||||||||||||  || ||||||| |||||||| ||||||||||||||| || ||||||||   | | ||| ||||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcag 33599328  T
Q  395 tccctcc 401  Q
    |||||||    
T  33599329 tccctcc 33599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 52641888 - 52642007
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac-agacgt 382  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||  | ||||| ||| || ||||| | | ||    
T  52641888 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagt-cctcaaatttacaaaatgt 52641986  T
Q  383 ccatcaaatcagtccctccgt 403  Q
     ||||||||||||||||||||    
T  52641987 tcatcaaatcagtccctccgt 52642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 2871165 - 2871046
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||| | | || |||  |||||||   | | |||    
T  2871165 gactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgtc 2871066  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  2871065 aatcaaatcagtccctccgt 2871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 1442599 - 1442655
Alignment:
Q  362 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  1442599 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgtta 1442655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 287 - 375
Target Start/End: Complemental strand, 52643736 - 52643648
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 375  Q
    ||||||||||||||||||||| |||||| ||||||| |  || |||||||||||||||| ||||||||  | |||||||||||||||||    
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaatttta 52643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 37088225 - 37088106
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||| |||||||||||| |||||||||| || ||||| |||||||||| ||||||| | | || |||| | |||||   | | |||    
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtc 37088126  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  37088125 aatcaaatcagtccctccgt 37088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 399
Target Start/End: Original strand, 50554164 - 50554278
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 384  Q
    |||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| | | ||||| |||||||||   | | |||     
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtca 50554263  T
Q  385 atcaaatcagtccct 399  Q
    |||||||||||||||    
T  50554264 atcaaatcagtccct 50554278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 33599187 - 33599248
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 345  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||||    
T  33599187 gactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaatttt 33599248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 1442551 - 1442611
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 345  Q
    |||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttt 1442611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 3011858 - 3011974
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    ||||||||||||||||||||| |||||| ||||||| |  || ||||| |||||||||| ||||||||| | |||||| ||||||||   | | ||| ||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaat 3011957  T
Q  387 caaatcagtccctccgt 403  Q
    ||||||||||| |||||    
T  3011958 caaatcagtccatccgt 3011974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 6816866 - 6816926
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 345  Q
    |||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaatttt 6816926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 15104487 - 15104547
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||    
T  15104487 ttcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaa 15104547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 25278854 - 25278934
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatc-ggcaaatttcgtccctgaatttttcgaaatatcaaattagtc 364  Q
    |||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||    
T  25278854 gactaatacctcaaattcatccttgaattttcaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 51894570 - 51894686
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 385  Q
    |||||| |||||||||| |||||||||| |||||| || ||||||| ||| ||||||||| ||||||||  | |||||||||||||||   | | ||| |    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaattt-gtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaa 51894668  T
Q  386 tcaaatcagtccctccgt 403  Q
    ||||||||||||||||||    
T  51894669 tcaaatcagtccctccgt 51894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 42134492 - 42134602
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    ||||||||||||||||||||| |    ||||| ||  || ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  42134592 gtccctccgtc 42134602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 23577636 - 23577725
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||| |||||||| ||||| |||  |||||||||||  ||||||| || | |||||| ||||||||||||||||||  |||||||    
T  23577636 gactaatacatcaaattcatccttcaatcctgaaaaatcgggcaatttcgaccttcaattttgcgaaatatcaaattagtcaatgaattt 23577725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 45044949 - 45045009
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattt 344  Q
    ||||||||||||||||||||||||||||||| |||||| ||   | |||||||||||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 18184017 - 18183961
Alignment:
Q  334 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  18184017 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 18183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 36895588 - 36895528
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  36895588 ttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 36895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 418
Target Start/End: Original strand, 5783427 - 5783498
Alignment:
Q  347 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  5783427 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 5783498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 403
Target Start/End: Original strand, 27940654 - 27940727
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 403  Q
    ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||   ||||||||||    
T  27940654 ttcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 4e-54; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 283 - 418
Target Start/End: Complemental strand, 32456016 - 32455881
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  32456016 ggactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgt 32455917  T
Q  383 ccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||||||||||||||||| |||||||||||||    
T  32455916 ccatcaaatcagtccctccgtccaaaatgtccgtta 32455881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 302 - 418
Target Start/End: Original strand, 3456766 - 3456882
Alignment:
Q  302 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 401  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  402 gtctaaaatgtccgtta 418  Q
    ||| ||||| |||||||    
T  3456866 gtccaaaatatccgtta 3456882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 284 - 414
Target Start/End: Complemental strand, 13613706 - 13613576
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||| |||||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13613607  T
Q  384 catcaaatcagtccctccgtctaaaatgtcc 414  Q
    |||||||| |||||||||||| |||| ||||    
T  13613606 catcaaattagtccctccgtccaaaaggtcc 13613576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 32518586 - 32518467
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||   | | |||    
T  32518586 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 32518487  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  32518486 aatcaaatcagtccctccgt 32518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 3480746 - 3480627
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   | | |||    
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtc 3480647  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  3480646 aatcaaattagtccctccgt 3480627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 32454248 - 32454367
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 32454347  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  32454348 aatcaaattagtccctccgt 32454367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 284 - 409
Target Start/End: Complemental strand, 32439215 - 32439090
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| ||| ||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 32439116  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    |||||||   ||||||||||| ||||    
T  32439115 catcaaaatggtccctccgtccaaaa 32439090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 18645192 - 18645074
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||||| ||||||||| ||||||||||||||||||| |||||||   | | |||    
T  18645192 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-acaattcgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtc 18645094  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  18645093 aatcaaatcagtccctccgt 18645074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 409
Target Start/End: Original strand, 20523367 - 20523491
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 384  Q
    |||||||| |||||||| |||| ||||||| |||||||||  || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  385 atcaaatcagtccctccgtctaaaa 409  Q
    ||||||   ||||||||||| ||||    
T  20523467 atcaaaatggtccctccgtccaaaa 20523491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 32516877 - 32517011
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||| || ||||||||||| |||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtc 32516976  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  32516977 catcaaaattgtccctccgtccaaaagctccgtta 32517011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 409
Target Start/End: Complemental strand, 7373079 - 7372957
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||  ||||||||| |||||| ||  || |||||||||||||||| ||||||||  | |||||||||||||||||||| |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  387 caaatcagtccctccgtctaaaa 409  Q
    ||||   ||||||||||| ||||    
T  7372979 caaaatggtccctccgtccaaaa 7372957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 288 - 418
Target Start/End: Original strand, 10568403 - 10568533
Alignment:
Q  288 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatc 387  Q
    ||||| ||||||||||||||||||||| ||||||| |  || ||||||| |||||||  ||||||||  | ||||||||||||||||||||||||| |||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatc 10568502  T
Q  388 aaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||  |||||||||||| ||||  |||||||    
T  10568503 aaaatagtccctccgtccaaaagctccgtta 10568533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 10570008 - 10569888
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||| |||||||| | ||||||| | |||||||  ||||||   | | |||    
T  10570008 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtc 10569909  T
Q  384 catcaaatcagtccctccgtc 404  Q
    |||||||||||||||||||||    
T  10569908 catcaaatcagtccctccgtc 10569888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 409
Target Start/End: Original strand, 11355223 - 11355347
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 384  Q
    |||||||||||||||||||||||||||||| |||||||||  || |||||| |||||||||  |||||||| | | | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  385 atcaaatcagtccctccgtctaaaa 409  Q
    | ||||   ||||||||||| ||||    
T  11355323 accaaaatggtccctccgtccaaaa 11355347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 13610690 - 13610808
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcg-gcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||| | |||||   | | ||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaattt-gtccctgaattttgcgaaatatcaaattagtccat-aatttacaaaatgt 13610787  T
Q  383 ccatcaaatcagtccctccgt 403  Q
    | |||||||||||||||||||    
T  13610788 caatcaaatcagtccctccgt 13610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||||||||||||||||||||||||||||||||| |  || ||| ||| |||||||| ||||||||| |||||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 278 - 403
Target Start/End: Complemental strand, 11357289 - 11357164
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 377  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  11357289 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 11357190  T
Q  378 gacgtccatcaaatcagtccctccgt 403  Q
     | |||  ||||||||||||||||||    
T  11357189 aatgtcattcaaatcagtccctccgt 11357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaat 352  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 6899485 - 6899591
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| ||||||||||||| ||||||| |  || |||||| || ||||||  |||||||| | ||||||||| |||||||||||| ||    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatc 6899584  T
Q  384 catcaaa 390  Q
    |||||||    
T  6899585 catcaaa 6899591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 272 - 403
Target Start/End: Complemental strand, 6902996 - 6902868
Alignment:
Q  272 tattataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaat 371  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||| |  || ||||||||| |||||| || |||||| | |||||||  ||||    
T  6902996 tattataaaa--gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcg-aatatctatttagtcctcgaat 6902900  T
Q  372 tttacagacgtccatcaaatcagtccctccgt 403  Q
    ||   | | |||||||||||||||||||||||    
T  6902899 ttacaaaatgtccatcaaatcagtccctccgt 6902868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 353
Target Start/End: Original strand, 7371175 - 7371244
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaata 353  Q
    |||||||||||||| |||||||||||||||| |||||||||| || || ||||||||||||| |||||||    
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 403
Target Start/End: Complemental strand, 20525432 - 20525304
Alignment:
Q  275 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 374  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||| ||  || ||| |||||||||||| | ||||| | | || |||| |||||||     
T  20525432 tataaaaacgactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattta 20525333  T
Q  375 acagacgtccatcaaatcagtccctccgt 403  Q
      | | ||| |||||||||||||||||||    
T  20525332 caaaatgtcaatcaaatcagtccctccgt 20525304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 8605414 - 8605353
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 345  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||||| ||||||    
T  8605414 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaatttt 8605353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 403
Target Start/End: Complemental strand, 14338584 - 14338480
Alignment:
Q  299 ttcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccc 398  Q
    |||||||||||||||| ||||||| || || |||||||   |||||| |||||| || ||||  ||||||||||| ||||||||||||||||   |||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  399 tccgt 403  Q
    |||||    
T  14338484 tccgt 14338480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 3018519 - 3018450
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  3018519 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 3018450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 418
Target Start/End: Original strand, 9398713 - 9398794
Alignment:
Q  337 ctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||| ||||||||| | ||||||||||||||||| |||||| |||||||   ||||||||||| ||||  |||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgtta 9398794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 21068628 - 21068744
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||||||||||||| || |||| |  || |||||||   |||||| ||||||||| | |||||||  ||||||   | | ||| ||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaat 21068727  T
Q  387 caaatcagtccctccgt 403  Q
    |||||||||||||||||    
T  21068728 caaatcagtccctccgt 21068744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 7049828 - 7049882
Alignment:
Q  355 caaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaa 409  Q
    |||||| |||||||||||||||||||||||||||||   ||||||||||| ||||    
T  7049828 caaattcgtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaa 7049882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  288 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 345  Q
    |||| ||||||||| |||||||||||| ||||||| || || ||||||||||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 17952129 - 17952032
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  17952129 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 17952032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 2968185 - 2968245
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||    
T  2968185 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaa 2968245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 21091109 - 21091144
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatc 322  Q
    |||||||||||||||||||||||||||| |||||||    
T  21091109 taatacctcaaattcgtccttgaattttcaaaaatc 21091144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 35175977 - 35175862
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||| |||||||||||||||| |   |||||| || |||||| |  |||||  |||||||||||| ||||||||||||||    |||||||||||| |      
T  35175977 tcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 35175878  T
Q  394 gtccctccgtctaaaa 409  Q
    ||||||||||| ||||    
T  35175877 gtccctccgtccaaaa 35175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 7051340 - 7051263
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatc 355  Q
    ||||| ||||||||||| |||||||   ||||||||| ||||||| |  || |||||| ||||||||| |||||||||    
T  7051340 aaaaatgactaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatc 7051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 4e-54; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 283 - 414
Target Start/End: Original strand, 43519423 - 43519554
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  43519423 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgt 43519522  T
Q  383 ccatcaaatcagtccctccgtctaaaatgtcc 414  Q
    |||||||||| ||||||||||| |||| ||||    
T  43519523 ccatcaaatccgtccctccgtccaaaaggtcc 43519554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 283 - 403
Target Start/End: Complemental strand, 4173830 - 4173710
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | ||||    
T  4173830 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgt 4173731  T
Q  383 ccatcaaatcagtccctccgt 403  Q
    | ||||| |||||||||||||    
T  4173730 caatcaactcagtccctccgt 4173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 43507167 - 43507286
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43507266  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  43507267 aatcaaatcagtccctccgt 43507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 43508742 - 43508623
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43508643  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  43508642 aatcaaatcagtccctccgt 43508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 283 - 403
Target Start/End: Complemental strand, 33266100 - 33265980
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||   | | ||    
T  33266100 ggactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 33266001  T
Q  383 ccatcaaatcagtccctccgt 403  Q
    | |||||||||||||||||||    
T  33266000 caatcaaatcagtccctccgt 33265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 319273 - 319392
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 319372  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||| ||||||||||||    
T  319373 aatcaaaccagtccctccgt 319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 5437811 - 5437930
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5437910  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  5437911 aatcaaattagtccctccgt 5437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 33264382 - 33264501
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||| |||||||||   | | |||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtc 33264481  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  33264482 aatcaaatcagtccctccgt 33264501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 51013975 - 51013856
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| |||||||||||||   | | |||    
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtc 51013876  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  51013875 aatcaaatcagtccctccgt 51013856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 287 - 409
Target Start/End: Complemental strand, 41761867 - 41761745
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||||||||||||| |||||||||| || ||||||||  |||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  387 caaatcagtccctccgtctaaaa 409  Q
    ||||   ||||||||||| ||||    
T  41761767 caaaatggtccctccgtccaaaa 41761745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 285 - 418
Target Start/End: Original strand, 49523125 - 49523258
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 384  Q
    |||||||||||||||||||| ||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  385 atcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||   ||||||||||| ||||  |||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgtta 49523258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 833223 - 833342
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 833322  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  833323 aatcaaattagtccctccgt 833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 5439736 - 5439617
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5439637  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  5439636 aatcaaattagtccctccgt 5439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 320989 - 320870
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||| |||| ||   | | |||    
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtc 320890  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||| |||||||||||||    
T  320889 aatcaactcagtccctccgt 320870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 835131 - 835012
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||| ||||||||||||||   | |||||    
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  835031 aatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 4169686 - 4169805
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||| |   ||||||||| ||||||||| |||||||||||||||||||||||||||   | | |||    
T  4169686 gactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 4169785  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||| ||||||||||||    
T  4169786 aatcaaaccagtccctccgt 4169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 35401749 - 35401868
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||  |||||||| | ||||||| |||||||   | | |||    
T  35401749 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtc 35401848  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  35401849 aatcaaatcagtccctccgt 35401868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 51011926 - 51012051
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| |||||||||||||||||||||| |||||||||  || ||| | | |||||||| ||||||||| | |||||| ||||||||||||||||||    
T  51011926 gactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtc 51012025  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    |||||||   ||||||||||| ||||    
T  51012026 catcaaaatggtccctccgtccaaaa 51012051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 275 - 418
Target Start/End: Original strand, 41781530 - 41781673
Alignment:
Q  275 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||| || ||||||||||||||||| || |||||||||| ||||||||| ||||||| ||||||||||||| | ||||||  | |||||||||||||||    
T  41781530 tataataatgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcaaaatatttatttagtccctgaattt 41781628  T
Q  374 tacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||| |||||||||   ||||||||||| ||||  |||||||    
T  41781629 tacagacatccatcaaaatggtccctccgtccaaaagctccgtta 41781673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 390
Target Start/End: Original strand, 48813786 - 48813893
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||||||||||||||||||||||| ||||||| || || ||  |||||||||||| | ||||||  | ||||| ||||||||||| ||||||    
T  48813786 ggactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgt 48813885  T
Q  383 ccatcaaa 390  Q
    ||||||||    
T  48813886 ccatcaaa 48813893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 49524822 - 49524703
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||||||||||||||   | | |||    
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 49524723  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||||||||| |||||    
T  49524722 aatcaaatcagtccttccgt 49524703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 294 - 403
Target Start/End: Original strand, 39345574 - 39345683
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||| | | |||||||||||||||   | | ||| |||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatca 39345673  T
Q  394 gtccctccgt 403  Q
    ||| ||||||    
T  39345674 gtctctccgt 39345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 20493827 - 20493946
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| ||||||||| ||| |||||| || ||||| | |||||||| ||||||||| | ||||| |||||||||   | | |||    
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgtc 20493926  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  20493927 aatcaaatcagtccctccgt 20493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 35404569 - 35404463
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||| |||| | |||||||||| |||||||||| || ||||||| | |||||| ||||||||  | ||| |||||||||||||||||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  384 catcaaa 390  Q
    || ||||    
T  35404469 caacaaa 35404463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 373
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  289 atacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    |||||||||||| || |||||||||||||||||| |  ||||||||   |||||||| |||||||||||||||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 48645255 - 48645374
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| ||||||| |  || ||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||     
T  48645255 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtt 48645354  T
Q  384 catcaaatcagtccctccgt 403  Q
    |||||||||||| |||||||    
T  48645355 catcaaatcagtacctccgt 48645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 400
Target Start/End: Original strand, 11601674 - 11601786
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 385  Q
    |||||||| |||||||| |||||||||| ||||||| | |||||||  ||||  |||||| | |||||| | ||||||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaattta-tccccaaattttgcaaaatat-atattagtccctgaattttacagacgtcca 11601771  T
Q  386 tcaaatcagtccctc 400  Q
    |||||  ||||||||    
T  11601772 tcaaaatagtccctc 11601786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 403
Target Start/End: Original strand, 11254113 - 11254238
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 377  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||| || | |||| || |||||| ||||||| |   || |||| |||||||   |    
T  11254113 aaaaatgacaaatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaatttacaa 11254212  T
Q  378 gacgtccatcaaatcagtccctccgt 403  Q
     | ||| |||||||||||||||||||    
T  11254213 aatgtcaatcaaatcagtccctccgt 11254238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 390
Target Start/End: Complemental strand, 48646852 - 48646765
Alignment:
Q  303 tccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    |||||||||||| |||| || || || ||||||| |||||||  ||||||||| | |||||||||||||||||||||| | |||||||    
T  48646852 tccttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaa 48646765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 39083676 - 39083773
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  39083676 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39083773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 409
Target Start/End: Original strand, 42980684 - 42980760
Alignment:
Q  333 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaa 409  Q
    |||| |||||||| |||||| || | ||||||||| ||||||||||||||||||||||   ||||||||||| ||||    
T  42980684 gtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaa 42980760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 44558607 - 44558511
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    |||| |||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  44558607 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 44558511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 396
Target Start/End: Original strand, 2691368 - 2691485
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 377  Q
    |||||||| ||||||||||| ||| || ||||||||| ||||||| || || |||||||   |||||| | ||||||| | ||||||||||||||||  |    
T  2691368 aaaaaggaataatacctcaacttcatc-ttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttttaa 2691466  T
Q  378 gacgtccatcaaatcagtc 396  Q
     | ||| ||||||||||||    
T  2691467 aatgtcaatcaaatcagtc 2691485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 5484577 - 5484674
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  5484577 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 5484674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 39189419 - 39189516
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  39189419 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 39921531 - 39921628
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  39921531 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39921628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 43779954 - 43779857
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  43779954 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 43779857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 44794838 - 44794765
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 403  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  44794838 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 20819986 - 20820096
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatc-ggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||| |||||||||||||||| ||||||| | |||||||  | ||| |||||| | ||||||  | ||||||||||||||||  | | |||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaattt-attcctaaattttgcaaaatatttatttagtccctgaattttcaaaatgtc 20820084  T
Q  384 catcaaatcagt 395  Q
     |||||||||||    
T  20820085 aatcaaatcagt 20820096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 390
Target Start/End: Original strand, 27624869 - 27624912
Alignment:
Q  347 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  27624869 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 27624912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 42982541 - 42982422
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||| | |||||  |||||||||||| ||||||| |  || |||||||||||||||| |||||||   | || |||| |||||||   | | |||    
T  42982541 gactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtc 42982442  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  42982441 aatcaaatcagtccctccgt 42982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 390
Target Start/End: Complemental strand, 52868254 - 52868167
Alignment:
Q  303 tccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    |||||||||||| |||||||||  || ||||||  | |||||| ||||||||| | |||||| |||||||| ||||||| | ||||||    
T  52868254 tccttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaa 52868167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 404
Target Start/End: Original strand, 35996109 - 35996183
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    ||||||||| |||| | | ||||||||| ||| |||||||||||  |||||||||||||||   |||||||||||    
T  35996109 ttcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtc 35996183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 403
Target Start/End: Complemental strand, 10372820 - 10372711
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||||||||| |||||||| |    ||||| || || |||||| |||| | ||||||||||| ||  |||||||||||  |||||||||||||||       
T  10372820 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaag 10372721  T
Q  394 gtccctccgt 403  Q
    ||||||||||    
T  10372720 gtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 32652136 - 32652233
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||  |||||  |||||||||||| |||||| |||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  32652136 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 32652233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 44994374 - 44994277
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||| || |||| ||||||||    
T  44994374 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgtta 44994277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 403
Target Start/End: Original strand, 47941857 - 47941930
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 403  Q
    |||||| || |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  47941857 ttcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 375
Target Start/End: Complemental strand, 2693373 - 2693285
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 375  Q
    ||||||||||| |||||| ||||||||| ||||||| || || ||  | ||| |||||| ||||||||| | ||||||  |||||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta 2693285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 404
Target Start/End: Original strand, 2827468 - 2827524
Alignment:
Q  348 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 2827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 13451058 - 13450998
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||||  |||||  |||||||||||| |||||| |||||||  |||||||||||||||    
T  13451058 ttcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaa 13450998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 3294 - 3428
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3294 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3393  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||  ||||||||||| |||| ||||||||    
T  3394 catcaaattcgtccctccgtccaaaaggtccgtta 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 4466 - 4600
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4466 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4565  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||  ||||||||||| |||| ||||||||    
T  4566 catcaaattcgtccctccgtccaaaaggtccgtta 4600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 14432 - 14313
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 14333  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  14332 aatcaaatcagtccctccgt 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 6786125 - 6785991
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  6786125 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtc 6786026  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||||||||||| |||||||| ||||    
T  6786025 catcaaatcagtccctccgtccaaaatgtctgtta 6785991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 284 - 409
Target Start/End: Complemental strand, 24208186 - 24208061
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    ||||||||||||||||||||| ||||    
T  24208086 catcaaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 37020508 - 37020642
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||  ||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  37020508 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtc 37020607  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||||||||||| |||||||||||||    
T  37020608 catcaaatcagtccctccgtccaaaatgtccgtta 37020642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 279 - 403
Target Start/End: Original strand, 24205593 - 24205717
Alignment:
Q  279 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 378  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |     
T  24205593 aaaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaa 24205692  T
Q  379 acgtccatcaaatcagtccctccgt 403  Q
    | ||| ||||||| |||||||||||    
T  24205693 atgtcaatcaaattagtccctccgt 24205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 278 - 418
Target Start/End: Complemental strand, 39664898 - 39664758
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 377  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||| ||||||||| | |||||||||||||||||||    
T  39664898 aaaaatgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttaca 39664799  T
Q  378 gacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||||||||   ||||||||||| ||||  |||||||    
T  39664798 gacgtccatcaaaatggtccctccgtccaaaagctccgtta 39664758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 14387349 - 14387468
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14387349 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtc 14387448  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  14387449 aatcaaataagtccctccgt 14387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 284 - 410
Target Start/End: Original strand, 16763076 - 16763202
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 16763175  T
Q  384 catcaaatcagtccctccgtctaaaat 410  Q
    |||||||   ||||||||||| |||||    
T  16763176 catcaaaatggtccctccgtccaaaat 16763202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 16764700 - 16764581
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 16764601  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||| ||||||||||||    
T  16764600 aatcaaaccagtccctccgt 16764581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 40560223 - 40560348
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||| ||||||||||| ||||||||| ||||||| || || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  40560223 gactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 40560322  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    |||||||  |||||||||||| ||||    
T  40560323 catcaaaatagtccctccgtccaaaa 40560348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 37022274 - 37022155
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 37022175  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  37022174 aatcaaattagtccctccgt 37022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 278 - 403
Target Start/End: Complemental strand, 2577575 - 2577450
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 377  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||   |    
T  2577575 aaaaatgactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaa 2577476  T
Q  378 gacgtccatcaaatcagtccctccgt 403  Q
     | ||| ||||||| |||||||||||    
T  2577475 aatgtcaatcaaattagtccctccgt 2577450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 284 - 409
Target Start/End: Complemental strand, 44709889 - 44709764
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| ||||| |||| || |||| ||||||||||| ||||||| | | |||||||||||||||||||||||||    
T  44709889 gactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtc 44709790  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    |||||||   ||||||||||| ||||    
T  44709789 catcaaaatggtccctccgtccaaaa 44709764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 409
Target Start/End: Complemental strand, 14389228 - 14389103
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||| || | |||    
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    |||||||   ||||||||||| ||||    
T  14389128 catcaaaatggtccctccgtccaaaa 14389103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 19908391 - 19908256
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaa-tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| || || ||||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  19908391 gactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 19908292  T
Q  383 ccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    || |||||   ||||||||||| ||||  |||||||    
T  19908291 ccgtcaaaatggtccctccgtccaaaagctccgtta 19908256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 40561967 - 40561848
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||  |||||| |||||||||||||||||||   | | |||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtc 40561868  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||| ||||||||||    
T  40561867 aatcaaatcggtccctccgt 40561848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 279 - 390
Target Start/End: Original strand, 2766929 - 2767040
Alignment:
Q  279 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 378  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||  ||  |||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  2766929 aaaatgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacag 2767028  T
Q  379 acgtccatcaaa 390  Q
    ||||| ||||||    
T  2767029 acgtctatcaaa 2767040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 6783364 - 6783453
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||||||||| | ||||||||||||| |||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 17696209 - 17696312
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||||   ||||||| | ||||||||||||||||||| ||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  387 caaa 390  Q
    ||||    
T  17696309 caaa 17696312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 403
Target Start/End: Original strand, 39663153 - 39663273
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||| ||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||||||||||||||   | | ||    
T  39663153 ggactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgt 39663252  T
Q  383 ccatcaaatcagtccctccgt 403  Q
    | |||||||||||||||||||    
T  39663253 caatcaaatcagtccctccgt 39663273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 16376736 - 16376855
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| ||||||||| |||||||||  || |||||||||||||||| ||||||| | | |||||||||||||||   | |  ||    
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatc 16376835  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  16376836 aatcaaatcagtccctccgt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 19581414 - 19581526
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||| |||||| ||||||| || || || ||||||||||||| ||||||||| | |||||||  ||||||  || | |||    
T  19581414 gactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtc 19581513  T
Q  384 catcaaatcagtc 396  Q
    |||||||||||||    
T  19581514 catcaaatcagtc 19581526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 287 - 403
Target Start/End: Original strand, 19906685 - 19906801
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||| ||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||||  |||||   | | ||| ||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaat 19906784  T
Q  387 caaatcagtccctccgt 403  Q
    |||||||||||||||||    
T  19906785 caaatcagtccctccgt 19906801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 390
Target Start/End: Original strand, 6797506 - 6797613
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||| |||||| |  ||||||||| |||||| ||| || ||||| |||||||||| ||||||||| | ||||||||| ||||||||||||||    
T  6797506 ggactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgt 6797605  T
Q  383 ccatcaaa 390  Q
    | ||||||    
T  6797606 ctatcaaa 6797613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 390
Target Start/End: Complemental strand, 42519346 - 42519243
Alignment:
Q  288 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttt-cgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    ||||||||||||||||||||||||||| |||||| |   || || |||| ||||||||| | ||||||| | ||||||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  387 caaa 390  Q
    ||||    
T  42519246 caaa 42519243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 39455169 - 39455275
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| |||||||| ||||||||||||| |||||||||  || |||   |||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  39455169 gactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtc 39455268  T
Q  384 catcaaa 390  Q
    |||||||    
T  39455269 catcaaa 39455275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 34400313 - 34400383
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaata 353  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || ||| |||||||||||| |||||||    
T  34400313 ggactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaata 34400383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 403
Target Start/End: Complemental strand, 39456875 - 39456750
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 377  Q
    ||||| ||||||||| |||||||| |||||||||||| |||||| ||  || ||||||| |||||||| | ||||| | | |||||||||||||||   |    
T  39456875 aaaaacgactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatttataa 39456776  T
Q  378 gacgtccatcaaatcagtccctccgt 403  Q
     | ||| ||||||||||||| |||||    
T  39456775 aatgtcaatcaaatcagtccatccgt 39456750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 11023100 - 11023003
Alignment:
Q  321 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| || ||||||||||| |||| ||||||||    
T  11023100 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgtta 11023003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 333 - 418
Target Start/End: Complemental strand, 16377292 - 16377207
Alignment:
Q  333 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||| | ||||||| | ||||||| ||||||||||| ||||||||||||   ||||||||||| ||||  |||||||    
T  16377292 gtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgtta 16377207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 42517558 - 42517599
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggc 325  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  42517558 gactaatacctcaaattcgtccttgaatttttaaaaatcggc 42517599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 390
Target Start/End: Original strand, 37417287 - 37417379
Alignment:
Q  298 attcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  37417287 attcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 37417379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 6799494 - 6799436
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 345  Q
    ||||| |||||||||||||||||||||| |||||||||  || ||||||| ||||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaatttt 6799436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 11315449 - 11315339
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||| ||||||||| |||||| |  ||||||| || ||||| ||  |||||  |||||||||||| |||| |||||||||  |||||||||||||||       
T  11315449 tcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatg 11315350  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  11315349 gtccctccgtc 11315339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 26584895 - 26584821
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    ||||||||| || ||||| ||||||||||||| ||||| ||||| | |||||||||||||||   ||||||||||    
T  26584895 ttcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtc 26584821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 4046352 - 4046403
Alignment:
Q  340 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 391  Q
    ||||||| ||||||||||||||||| || ||||| |||| ||||||||||||    
T  4046352 aattttttgaaatatcaaattagtctctaaatttaacagtcgtccatcaaat 4046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 333 - 404
Target Start/End: Complemental strand, 29909735 - 29909664
Alignment:
Q  333 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    |||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  29909735 gtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtc 29909664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 361455 - 361561
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||| |||||||||||||||| |  ||||||| ||  || ||||| |||| |  |||||||||||||||||  ||||||   |||||||||||||| | |    
T  361455 tcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtccatcaattta 361554  T
Q  394 gtccctc 400  Q
    |||||||    
T  361555 gtccctc 361561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 37645490 - 37645607
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    ||||||| ||| |||||||||||||||| ||||||| |   | ||||||| | ||||||  |||||||| | ||||||| |||||||| |||| ||  ||    
T  37645490 taataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttat 37645589  T
Q  387 caaatcagtccctccgtc 404  Q
    ||||   |||||||||||    
T  37645590 caaaattgtccctccgtc 37645607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 15432378 - 15432434
Alignment:
Q  334 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||    
T  15432378 tccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaa 15432434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 6e-50; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 278 - 418
Target Start/End: Complemental strand, 3152368 - 3152228
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 377  Q
    ||||| |||||||||||||||||  ||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  3152368 aaaaacgactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttaca 3152269  T
Q  378 gacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||||| ||||||||||| |||| ||||||||    
T  3152268 gacgtccatcaaatccgtccctccgtccaaaaggtccgtta 3152228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 290 - 418
Target Start/End: Original strand, 2660218 - 2660346
Alignment:
Q  290 tacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaa 389  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  390 atcagtccctccgtctaaaatgtccgtta 418  Q
    ||  ||||||||||| |||| ||| ||||    
T  2660318 attcgtccctccgtccaaaaggtctgtta 2660346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 44794208 - 44794341
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||||||||||| |||| |||    
T  44794208 gactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtc 44794306  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||  ||||||||||| |||| ||||||||    
T  44794307 catcaaattcgtccctccgtccaaaaggtccgtta 44794341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 46308807 - 46308926
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46308906  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  46308907 aatcaaatcagtccctccgt 46308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 53190903 - 53190769
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  53190903 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 53190804  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  53190803 catcaaaatggtccctccgtccaaaagctccgtta 53190769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 38193599 - 38193480
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38193599 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38193500  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||||||||| |||||    
T  38193499 aatcaaatcagtccatccgt 38193480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 53094362 - 53094243
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53094263  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  53094262 aatcaaatgagtccctccgt 53094243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 54900163 - 54900044
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||   | | |||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtc 54900064  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  54900063 aatcaaatcagtccctccgt 54900044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 283 - 373
Target Start/End: Complemental strand, 41979442 - 41979352
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41979442 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 3150252 - 3150369
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  3150252 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 3150351  T
Q  384 catcaaatcagtccctcc 401  Q
     |||||||||||||||||    
T  3150352 aatcaaatcagtccctcc 3150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 41977750 - 41977875
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    | |||||   ||||||||||| ||||    
T  41977850 cgtcaaaatggtccctccgtccaaaa 41977875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 38191895 - 38192014
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38191994  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  38191995 aatcaaatcagtccctccgt 38192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 53187742 - 53187861
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53187841  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  53187842 aatcaaatcagtccctccgt 53187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 284 - 390
Target Start/End: Complemental strand, 2226296 - 2226190
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  384 catcaaa 390  Q
    |||||||    
T  2226196 catcaaa 2226190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 27899225 - 27899091
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 27899126  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||| |||   ||||||||||| ||||  |||||||    
T  27899125 cataaaaatggtccctccgtccaaaagctccgtta 27899091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 21348723 - 21348848
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 21348822  T
Q  384 catcaaatcagtccctccgtctaaaa 409  Q
    |||||||   ||||||||||| ||||    
T  21348823 catcaaaatggtccctccgtccaaaa 21348848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 46310525 - 46310406
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46310525 gactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46310426  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||| ||||||||||||    
T  46310425 aatcaaaccagtccctccgt 46310406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 46611392 - 46611273
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtc 46611293  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  46611292 aatcaaatcagtccctccgt 46611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 54898437 - 54898543
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 54898536  T
Q  384 catcaaa 390  Q
    |||||||    
T  54898537 catcaaa 54898543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 46609149 - 46609264
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||   | | |||    
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 46609248  T
Q  384 catcaaatcagtccct 399  Q
     |||||||||||||||    
T  46609249 aatcaaatcagtccct 46609264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 53092623 - 53092742
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | | |||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtc 53092722  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  53092723 aatcaaatcagtccctccgt 53092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 289 - 401
Target Start/End: Complemental strand, 2661992 - 2661880
Alignment:
Q  289 atacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatca 388  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||| |||||||   | | ||| ||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatca 2661893  T
Q  389 aatcagtccctcc 401  Q
    |||||||||||||    
T  2661892 aatcagtccctcc 2661880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 327 - 418
Target Start/End: Complemental strand, 19987695 - 19987604
Alignment:
Q  327 aatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||| ||||    
T  19987695 aatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgtta 19987604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 28626411 - 28626530
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 28626510  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  28626511 aatcaaattagtccctccgt 28626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 278 - 373
Target Start/End: Original strand, 35903819 - 35903914
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 373  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||||||| | |||||||||||||||||||||||||    
T  35903819 aaaaacgactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 30600063 - 30599937
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||||||||||||||||||| |||||| | |||||||| || || ||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  30600063 ggactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgt 30599964  T
Q  383 ccatcaaatcagtccctccgtctaaaa 409  Q
    | ||||||   ||||||||||| ||||    
T  30599963 cgatcaaaatggtccctccgtccaaaa 30599937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 284 - 418
Target Start/End: Original strand, 51684610 - 51684744
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||| |||||||||||||||||||||| ||||||| || || ||| |||||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtc 51684709  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||   ||||||||||| ||||  |||||||    
T  51684710 catcaaaatggtccctccgtccaaaagctccgtta 51684744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 7883328 - 7883447
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||||||| ||||||  |||||||||||||||| |||||||||   | |  ||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttc 7883427  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  7883428 aatcaaatcagtccctccgt 7883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 23291570 - 23291689
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||| ||||||||   | | |||    
T  23291570 gactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtc 23291669  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  23291670 aatcaaatcagtccctccgt 23291689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 46112487 - 46112606
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||   |||||||| | ||||||| | ||||||| |||||||||||||||||    
T  46112487 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtc 46112586  T
Q  384 catcaaatcagtccctccgt 403  Q
    |||||||   ||||||||||    
T  46112587 catcaaaatggtccctccgt 46112606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 390
Target Start/End: Original strand, 17515310 - 17515416
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||| |||||||||||| |||||| ||| || ||| || ||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  17515310 gactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 17515409  T
Q  384 catcaaa 390  Q
    |||||||    
T  17515410 catcaaa 17515416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 284 - 418
Target Start/End: Complemental strand, 23293314 - 23293180
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||| || ||||||||| |||||||| || || |||| || |||||||| ||||||||| | ||||||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  384 catcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||  |||||||||||| ||||  |||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgtta 23293180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 297 - 409
Target Start/End: Complemental strand, 35905843 - 35905731
Alignment:
Q  297 aattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 396  Q
    ||||| |||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||   |||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  397 cctccgtctaaaa 409  Q
    |||||||| ||||    
T  35905743 cctccgtccaaaa 35905731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 390
Target Start/End: Original strand, 43765139 - 43765243
Alignment:
Q  286 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 385  Q
    ||||||||||||||||||||||||||||| |||||||||  || ||||| || ||||||| ||||||||| | |||||  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  386 tcaaa 390  Q
    |||||    
T  43765239 tcaaa 43765243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 611311 - 611192
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||||| | | |||| ||||||||||   | | |||    
T  611311 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgtc 611212  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  611211 aatcaaattagtccctccgt 611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 285 - 403
Target Start/End: Complemental strand, 2379071 - 2378953
Alignment:
Q  285 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 384  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| | ||||| | | ||||||| |||||||   | | |||     
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtca 2378972  T
Q  385 atcaaatcagtccctccgt 403  Q
    |||||||||||||||||||    
T  2378971 atcaaatcagtccctccgt 2378953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 409
Target Start/End: Original strand, 42279510 - 42279632
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||| ||||||||| ||||||| ||  | |||||| | ||||||| | ||||||| | ||||||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  387 caaatcagtccctccgtctaaaa 409  Q
    ||||   ||||||||||| ||||    
T  42279610 caaaatggtccctccgtccaaaa 42279632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 403
Target Start/End: Original strand, 44267976 - 44268100
Alignment:
Q  279 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 378  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| || ||| || ||||||||| ||||||| | | || |||| |||||||   |     
T  44267976 aaaatgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaa 44268075  T
Q  379 acgtccatcaaatcagtccctccgt 403  Q
    | ||| |||||||||||||||||||    
T  44268076 atgtcaatcaaatcagtccctccgt 44268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 418
Target Start/End: Original strand, 2377032 - 2377163
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||  ||||||||| |||||| | | || |||||||||||||||| | ||| ||  | |||||| |||||||||||||||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  387 caaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||   || |||||||||||||  |||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgtta 2377163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 23774162 - 23774268
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    ||||||||||||||||||||| |  | ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||  |    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaa 23774261  T
Q  394 gtccctc 400  Q
    |||||||    
T  23774262 gtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 30598337 - 30598456
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||| | | || |||| |||||||   | | ||    
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattt-gtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgt 30598435  T
Q  383 ccatcaaatcagtccctccgt 403  Q
    | ||||||| |||||||||||    
T  30598436 caatcaaattagtccctccgt 30598456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 345  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | ||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 403
Target Start/End: Complemental strand, 42282559 - 42282443
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||||||||||||||||||||||||| ||||||| |  || |||||  ||||||||| ||||||||| | ||||||| |||||||   | | || |||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttcat 42282460  T
Q  387 caaatcagtccctccgt 403  Q
     ||||||||||||||||    
T  42282459 taaatcagtccctccgt 42282443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 400
Target Start/End: Complemental strand, 51686483 - 51686367
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||||||||| |||||| ||||||| || || ||||||||| |||||| ||||||||  | |||||||  ||||||   | | ||     
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgtt 51686384  T
Q  384 catcaaatcagtccctc 400  Q
    |||||||||||||||||    
T  51686383 catcaaatcagtccctc 51686367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 400
Target Start/End: Original strand, 48829355 - 48829472
Alignment:
Q  283 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    |||||||||||||||||||||||||||||||| |||| || || || ||  | |||||||||| ||||||||| | |||||||  | ||||   | | ||    
T  48829355 ggactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcctcggatttacaaaatgt 48829454  T
Q  383 ccatcaaatcagtccctc 400  Q
    ||||||||||||||||||    
T  48829455 ccatcaaatcagtccctc 48829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 23888886 - 23888776
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||||||||| |||||||| | |  ||||| || ||||||||| |||| | ||||||||||  |||||||||||||||  || ||||||||||||       
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  23888786 gtccctccgtc 23888776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 40509025 - 40508915
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    ||||||||||||||||||||| |    ||||| || ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||       
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  40508925 gtccctccgtc 40508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 404
Target Start/End: Original strand, 48633887 - 48633997
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    ||||||||||||||||||||| |    ||||  || ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  48633987 gtccctccgtc 48633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 54412633 - 54412519
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    ||||| ||||||||||||| |||||||| |||||| ||  || ||||||| |||||||| ||| ||||| | ||||| |||||||||   | | ||| ||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaat 54412534  T
Q  387 caaatcagtccctcc 401  Q
    |||||||||||||||    
T  54412533 caaatcagtccctcc 54412519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 2977443 - 2977347
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 390  Q
    ||||||||||||||||||||| |  ||||||| || ||| ||||| |||| | ||||||||||| | ||||||| |||||  || ||||||||||||    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaa 2977347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 404
Target Start/End: Complemental strand, 25535317 - 25535253
Alignment:
Q  340 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||| |||||   ||||||||||    
T  25535317 aatttttcgaaatattaagttagtccctgaatttaacagacgtccaccaaattcatccctccgtc 25535253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 21350694 - 21350575
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    |||||||||||||||||| ||| ||| ||||  ||||||||| || |||||  ||||||||| ||||||| | | || |||| |||||||   | | |||    
T  21350694 gactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 21350595  T
Q  384 catcaaatcagtccctccgt 403  Q
     |||||||||||||||||||    
T  21350594 aatcaaatcagtccctccgt 21350575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 404
Target Start/End: Complemental strand, 23877044 - 23876982
Alignment:
Q  342 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||||||   ||||||||||    
T  23877044 ttttttgaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtc 23876982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 45898462 - 45898352
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    |||||||||||| |||||||| | |  ||| | || || ||||||||||| | ||||||||||| ||||||| |||||||  |||||||| ||||||       
T  45898462 tcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaag 45898363  T
Q  394 gtccctccgtc 404  Q
    |||||||||||    
T  45898362 gtccctccgtc 45898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 403
Target Start/End: Complemental strand, 17517052 - 17516943
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 393  Q
    ||||||||||||||||||||| |||||||||  || ||||| | |||||||| |||||||   | || |||| |||||||   | | ||| |||||||||    
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatca 17516953  T
Q  394 gtccctccgt 403  Q
    ||||||||||    
T  17516952 gtccctccgt 17516943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 600725 - 600805
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtc 364  Q
    |||||||||||||||||| |||||||||||| |||||||| | || || || | |||||||| | ||||||| | ||||||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 418
Target Start/End: Complemental strand, 7884939 - 7884883
Alignment:
Q  362 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 418  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||  |||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgtta 7884883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 46114195 - 46114075
Alignment:
Q  284 gactaatacctcaaattcgtccttgaatttt-gaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 382  Q
    ||||| |||||||||||  ||||||||||||  |||||||||| || || |||| |||||||| ||||||||| | ||||||  |||||||   | | ||    
T  46114195 gactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaatttacaaaatgt 46114096  T
Q  383 ccatcaaatcagtccctccgt 403  Q
    | |||||||||||| ||||||    
T  46114095 caatcaaatcagtcactccgt 46114075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 46197766 - 46197822
Alignment:
Q  330 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    |||||| ||||||||| | ||||||| | ||||| ||||||||||||||||||||||    
T  46197766 ttcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccat 46197822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 404
Target Start/End: Complemental strand, 33113254 - 33113184
Alignment:
Q  334 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 404  Q
    ||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  33113254 tccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 41944586 - 41944666
Alignment:
Q  294 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 374  Q
    |||| ||||||| |||||||| |   |||||| || ||||||||  |||||  |||||||||||| |||||||||||||||    
T  41944586 tcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttt 41944666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 982 - 1101
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 1081  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  1082 aatcaaattagtccctccgt 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 54347 - 54228
Alignment:
Q  284 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 383  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 54248  T
Q  384 catcaaatcagtccctccgt 403  Q
     ||||||| |||||||||||    
T  54247 aatcaaattagtccctccgt 54228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 287 - 418
Target Start/End: Original strand, 1266 - 1397
Alignment:
Q  287 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 386  Q
    ||||||||||||| |||||||||||||| |||||| ||  || ||||||| ||||||||  |||||||| | ||||||||||||||||||||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  387 caaatcagtccctccgtctaaaatgtccgtta 418  Q
    ||||   ||||||||||| ||||  |||||||    
T  1366 caaaatggtccctccgtccaaaagctccgtta 1397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 278 - 403
Target Start/End: Complemental strand, 1650 - 1525
Alignment:
Q  278 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 377  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  1650 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 1551  T
Q  378 gacgtccatcaaatcagtccctccgt 403  Q
     | |||  ||||||||||||||||||    
T  1550 aatgtcattcaaatcagtccctccgt 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 8264 - 8353
Alignment:
Q  286 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 375  Q
    ||||||||||||||||||||||||||||| |||||| ||| || ||||| | |||||||| | ||||||| | |||||||||||||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttta 8353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 436272 - 436336
Alignment:
Q  291 acctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatc 355  Q
    ||||||||||||| |||||||||| ||||||| || || ||| ||| | |||||| |||||||||    
T  436272 acctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatc 436336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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