View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11905_high_1 (Length: 919)
Name: NF11905_high_1
Description: NF11905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11905_high_1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 896; Significance: 0; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 896; E-Value: 0
Query Start/End: Original strand, 1 - 904
Target Start/End: Complemental strand, 36209742 - 36208839
Alignment:
| Q |
1 |
tttcttgcagtaatttcctctgtggttctttaaagggagggaagaattcaccttcctctctaataagatggtttgaactatgtttggtatggttggttct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209742 |
tttcttgcagtaatttcctctgtggttctttaaagggagggaagaattcaccttcctctctaataagatggtttgaactatgtttggtatggttggttct |
36209643 |
T |
|
| Q |
101 |
gttaacaagtcattgtttgctaaatagtataacatattgtagctgttttattttcaaagtttaatttagatttttgaatattaacttggagtgcaaggct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209642 |
gttaacaagtcattgtttgctaaatagtataacatattgtagctgttttattttcaaagtttaatttagatttttgaatattaacttggagtgcaaggct |
36209543 |
T |
|
| Q |
201 |
atgctttgacctgataaataattgtataattattgtacaatgtttgaaatctcaaaattttaggagatgttttgtcgatttttctacacagatccttgga |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209542 |
atgctttgacctgataaataattgtataattattgtacaatgtttgaaatctcaaaattttaggagatgttttgtcgatttttctacacagatccttgga |
36209443 |
T |
|
| Q |
301 |
atacaagttttataatttagtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattatgctttagatgatagactctg |
400 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209442 |
atacaagttttataatttattagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattatgctttagatgatagactctg |
36209343 |
T |
|
| Q |
401 |
tagcttgatgtttggcttattttatttttcaatttcaggcggaggtgtgaaatttaatcattccttaatctaattagactctacccaccaaagttactca |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209342 |
tagcttgatgtttggcttattttatttttcaatttcaggcggaggtgtgaaatttaatcattccttaatctaattagactctacccaccaaagttactca |
36209243 |
T |
|
| Q |
501 |
cataagccaccatctatatgttgacacatattttcattatttaaacaaaactctaatcacatttgcttgaataaaacaactcaaattttaaataatatct |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209242 |
cataagccaccatctatatgttgacacatattttcattatttaaacaaaactctaatcacatttgcttgaataaaacaactcaaattttaaataatatct |
36209143 |
T |
|
| Q |
601 |
cattcttcatttcctttcaaccaaacaagatatcattcttcatttcccttttccccatttatttattgtaataaagtaatatgataaattgaatatttga |
700 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209142 |
cattcttcatttcctttcaaccaaacaagatatcattcttcatttcccttttccccatttatttattgtaataaagtaatatgataaattgaatatttga |
36209043 |
T |
|
| Q |
701 |
atttggtcaaacgaagctttctcacttctcagatcaaatgaaactttctgttacttcattcagttagttagactgcaaggcgcacgcaccttgagttgtt |
800 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36209042 |
atttggtcaaacgaagctttctcacttctcagatcaaatgaaactttctgttacttcgttcagttagttagactgcaaggcgcacgcaccttgagttgtt |
36208943 |
T |
|
| Q |
801 |
gtaagagttcgattctcttgtttatagcatcatttcctcttcttcttttttcagcatacatatgcacaaaaaatagaccactttaattattcaagcttct |
900 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36208942 |
gtaagagttcgattctcttgtttatagcatcatttcctcttcttcttttttcagcatacatatgcacaaaaaatagaccactttaattattcaagcttct |
36208843 |
T |
|
| Q |
901 |
tatt |
904 |
Q |
| |
|
|||| |
|
|
| T |
36208842 |
tatt |
36208839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 1 - 629
Target Start/End: Complemental strand, 36196618 - 36195987
Alignment:
| Q |
1 |
tttcttgcagtaatttcctctgtggttctttaaagggagggaagaattcaccttcctctctaataagatggtttgaactatgtttggtatggttggttct |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| |||||||| ||| ||| | |||| |||||||||||||||||||| ||||||| |||| |
|
|
| T |
36196618 |
tttcttgcagtaatttcgtctgtggttctttaaagggagggaggaattcactttcttctttgataaaatggtttgaactatgtttggaatggttgcttct |
36196519 |
T |
|
| Q |
101 |
gttaacaagtcattgtttgctaaatagtataacatattgtagctgttttattttcaaagtttaatttagatttttgaatattaacttggagtgcaaggct |
200 |
Q |
| |
|
|||||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
36196518 |
gttaacaagtcact-tttgctaaatagtatagcatattgtagctgttttattttcaaattttaatttagattttttaatattaacttggagtgcaaggct |
36196420 |
T |
|
| Q |
201 |
atgctttgacctgataaataattgtataattat---------tgtacaatgtttgaaatctcaaaattttaggagatgttttgtcgatttttctacacag |
291 |
Q |
| |
|
||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
36196419 |
atgctttgacctgataaataattgtataattgtaaaggcttttgtactatgtttgaaatctcaatattttaggagatgttttgtcgatttttctacacag |
36196320 |
T |
|
| Q |
292 |
atccttggaatacaagttttataatttagtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattatgctttagatga |
391 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
36196319 |
atccttgcaatacgagttttataatttagtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacatcattcattatgcgttacatga |
36196220 |
T |
|
| Q |
392 |
tagactctgtagcttgatgtttggcttattttatttttcaatttcaggcggaggtgtgaaatttaatcattccttaatctaattagactct--acccacc |
489 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||| |||||||| | ||||| |
|
|
| T |
36196219 |
tagactctgtagcttgttgtttggcttattttatttttcaatttca---ggtggtgtgaaatttaatctttccttaatctaa-tagactctggagccacc |
36196124 |
T |
|
| Q |
490 |
aaagttactcacataagccaccatctatatgttgacacatattttcattatttaaacaaaactctaatcacatttgcttgaataaaacaactcaaatttt |
589 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
36196123 |
aaagttactcacataa---cccatctatatgttgacacatattttcattatttaaacaaaactctaatcacatctgtttgaataaaacaactcaaattca |
36196027 |
T |
|
| Q |
590 |
aaataatatctcattcttcatttcctttcaaccaaacaag |
629 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
36196026 |
aaataatatctcattcttcgtttcatttcaaccaaacaag |
36195987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1 - 475
Target Start/End: Complemental strand, 36184357 - 36183879
Alignment:
| Q |
1 |
tttcttgcagtaatttcctctgtggttctttaaagggagggaagaattcaccttcctctctaataagatggtttgaactatgtttggtatggttggttct |
100 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| |||||||| ||||| | |||||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
36184357 |
tttcttgcagtaatttccactgcggttctttcaagggaggagggaatttaacttcctcttcgataaaatggtttgaactatgtttggtatggttggttct |
36184258 |
T |
|
| Q |
101 |
gttaacaagtcattgtttgctaaatagtataacatattgtagctgttttattttcaaagtttaatttagatttttgaatattaacttggagtgcaaggct |
200 |
Q |
| |
|
||||||| |||| | |||||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||| |||||||| ||||| |||||| |
|
|
| T |
36184257 |
gttaacatgtcact-tttgctaaatagtataacatattgtaactgttttattttcaaagttaagtttagaattttgaaaattaactttgagtgtaaggct |
36184159 |
T |
|
| Q |
201 |
atg-ctttgacctgataaataattgtataa----------ttattgtacaatgtttgaaatctcaaaattttaggagatgttttgtcgatttttctacac |
289 |
Q |
| |
|
||| ||||||| ||||||||||||||||| | |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
36184158 |
atgtttttgaccggataaataattgtataaattgtaaaggcttttgtactatgtttgaaatctcaatattttaggagatgttttgtctatttttctacac |
36184059 |
T |
|
| Q |
290 |
agatccttggaatacaagttttataatttagtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattat-gctttaga |
388 |
Q |
| |
|
|||||||||||||||| ||| |||||||||| ||||||| || ||||||||| |||||| ||||| |||||||| |||| ||| |||||||| |
|
|
| T |
36184058 |
agatccttggaatacaggtt------cttagtagtctatttggttaat-tcatttgatgctatcttaactcgtttaaacatcatttgctatggctttaga |
36183966 |
T |
|
| Q |
389 |
tgatagactctgtagcttgatgtttggcttattttatttttcaatttcaggcggaggtgtgaaatttaatcattccttaatctaatt |
475 |
Q |
| |
|
| |||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||| |||| |||||||||| |
|
|
| T |
36183965 |
taatagactccctagcttgatgtttggcttatttaatttttcaatttcagatggagacctgaaatttaatgtttccctaatctaatt |
36183879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 36188301 - 36188068
Alignment:
| Q |
1 |
tttcttgcagtaatttcctctgtggttctttaaagggagggaagaattcaccttcctctctaataagatggtttgaactatgtttggtatggttggttct |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||| |
|
|
| T |
36188301 |
tttcttgcagtaatttcctctgtggctctttaaagggaggggggaattcaccttcctctctaataaaatggtttgaactaggtttggtatggtttgttct |
36188202 |
T |
|
| Q |
101 |
gtt---aacaagtcattgtttgctaaatagtataacatattgtagctgttttattttcaaagtttaatttagatttttgaatattaacttggagtgcaag |
197 |
Q |
| |
|
||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
36188201 |
gttgttaacaagtcatggtttgctaaatagtataacatattgtaactgtttaattttcaaagtttaatttagaattttgaatattaacttggagtgcaag |
36188102 |
T |
|
| Q |
198 |
gctatgctttgacctgataaataattgtataatt |
231 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |
|
|
| T |
36188101 |
gctatggtttgacctgataaataattgtataatt |
36188068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 485 - 641
Target Start/End: Complemental strand, 36187709 - 36187556
Alignment:
| Q |
485 |
ccaccaaagttactcacataagccaccatctatatgttgacacatattttcattatttaaacaaaactctaatcacatttgcttgaataaaacaactcaa |
584 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36187709 |
ccaccaaagttactcacataaccca---tctatatgttaacacatattttcattatttaaacaaaactctaatcacatttgtttgaataaaacaactcaa |
36187613 |
T |
|
| Q |
585 |
attttaaataatatctcattcttcatttcctttcaaccaaacaagatatcattcttc |
641 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
36187612 |
atttaaaataatatctcattcttcatttcctttccaccaaacaagctatcattcttc |
36187556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 296 - 475
Target Start/End: Complemental strand, 36199771 - 36199592
Alignment:
| Q |
296 |
ttggaatacaagttttataatttagtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattatgctttagatgataga |
395 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||| | |||||||||||||||||| | ||||||||||| ||||||||||| ||||||| ||||| |
|
|
| T |
36199771 |
ttggaatacaggttttaaaatttagtagtctgttctgcaaatgtcatttgatactatcatatatcttttaaacaacattcattatgttttagataataga |
36199672 |
T |
|
| Q |
396 |
ctctgtagcttgatgtttggcttattttatttttcaatttcaggcggaggtgtgaaatttaatcattccttaatctaatt |
475 |
Q |
| |
|
|| | ||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |||| |||||||||| |
|
|
| T |
36199671 |
ctacgcagcttgatgtttggcttatttcatttttcaatttcaggtggaggcatgaaatttaatctttccctaatctaatt |
36199592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 36200528 - 36200335
Alignment:
| Q |
1 |
tttcttgcagtaatttcctctgtggttctttaaagggagggaagaattcaccttcctctctaataagatggtttgaactatgtttggtatggttggttct |
100 |
Q |
| |
|
||||||||| || |||||| |||||||| |||| ||| || |||||||| ||||||| | | || || ||||||||| ||||||||||||| ||||| |
|
|
| T |
36200528 |
tttcttgcattattttcctatgtggttcagaaaagagagagaggaattcactttcctctttgacaaaatagtttgaactcggtttggtatggttagttct |
36200429 |
T |
|
| Q |
101 |
gttaacaagtcattgtttgctaaatagtataacatattgtagctgttttattttcaaagttt-aatttagatttttgaatattaacttggagtg |
193 |
Q |
| |
|
||||||||||| ||||||||||||| | ||| |||||||||||||||| |||||||||||| | |||||| ||||| ||||||| |||||||| |
|
|
| T |
36200428 |
gttaacaagtcgttgtttgctaaatgatgtaatatattgtagctgttttgttttcaaagtttcattttagaattttggatattaatttggagtg |
36200335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 291 - 404
Target Start/End: Complemental strand, 36187818 - 36187709
Alignment:
| Q |
291 |
gatccttggaatacaagttttataatttagtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattatgctttagatg |
390 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
36187818 |
gatccttagaatacaagtttcataatttagtagtctc----gttgatgtcatttgatactacctcaactcttttaaacaccattcattatattttagatg |
36187723 |
T |
|
| Q |
391 |
atagactctgtagc |
404 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
36187722 |
atatactctgtagc |
36187709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 293 - 417
Target Start/End: Complemental strand, 36211922 - 36211800
Alignment:
| Q |
293 |
tccttggaatacaagttttataatttagtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattatgctttagatgat |
392 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||| ||||| | |||||||||||| ||||| || ||| ||||||| || ||||||| |||||||||| |
|
|
| T |
36211922 |
tccttggaatacaagttttataacatagtactct-tttggctaatgtcatttgatcctatccaaaatctcttaaacagtat-cattatgttttagatgat |
36211825 |
T |
|
| Q |
393 |
agactctgtagcttgatgtttggct |
417 |
Q |
| |
|
|||| |||||||||||||||||||| |
|
|
| T |
36211824 |
agaccctgtagcttgatgtttggct |
36211800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 694
Target Start/End: Complemental strand, 36185868 - 36185818
Alignment:
| Q |
643 |
tttcccttttccccatttatttattgtaataaagtaatatgataaattgaat |
694 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36185868 |
tttcccttttccc-atttatttattgtaataaagtaatatgataaattgaat |
36185818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 295 - 417
Target Start/End: Complemental strand, 36190484 - 36190364
Alignment:
| Q |
295 |
cttggaatacaagttttataatttagtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattatgctttagatgatag |
394 |
Q |
| |
|
||||| ||||||||||||||| ||||||||| ||||| | |||||||||||| ||||| || ||| ||||| | | |||||||| |||||||||||| |
|
|
| T |
36190484 |
cttgggatacaagttttataacatagtagtct-tttggctaatgtcatttgatcctatccaaaatctcttaaatagta-tcattatgttttagatgatag |
36190387 |
T |
|
| Q |
395 |
actctgtagcttgatgtttggct |
417 |
Q |
| |
|
|| |||| ||||||||||||||| |
|
|
| T |
36190386 |
accctgtggcttgatgtttggct |
36190364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 814
Target Start/End: Complemental strand, 36185813 - 36185740
Alignment:
| Q |
734 |
tcaaatgaaactttctgttacttcattcagttagttagactgcaaggcgcacgcaccttgagttgttgtaagagttcgatt |
814 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||| |
|
|
| T |
36185813 |
tcaaatgaaactttctgttacttc-----gttagttagactgcaaagcatac--accttgagttgttgtaagagttcgatt |
36185740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 36201857 - 36201781
Alignment:
| Q |
147 |
tttattttcaaagtttaatttagatttttgaatattaacttggagtgcaaggctatgctttgacctgataaataatt |
223 |
Q |
| |
|
|||||||||||||||| ||||||| ||||| ||| | | || ||||||||||||||| ||| ||| ||||||||||| |
|
|
| T |
36201857 |
tttattttcaaagtttcatttagaattttggataatgattttgagtgcaaggctatgttttaaccagataaataatt |
36201781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 36212070 - 36211982
Alignment:
| Q |
137 |
ttgtagctgttttattttcaaagtttaatttagatttttgaatattaacttggagtgcaaggctatgctttgacctgataaataattgt |
225 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||| ||||| | | ||||| ||||||||| ||| | |||||| ||||||| |
|
|
| T |
36212070 |
ttgtagttgttttattttcaaagtttaatttagaattttggatattgatctagagtgtaaggctatgttttaatatgataagtaattgt |
36211982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 36208720 - 36208642
Alignment:
| Q |
270 |
ttttgtcgatttttctacacagat-ccttggaatacaagttttataatttagtagtctgtttggttgatgtcatttgat |
347 |
Q |
| |
|
|||||| |||||||||| ||| || ||||| ||||||||||||||||||||| |||||||| | | |||||||||||| |
|
|
| T |
36208720 |
ttttgttgatttttctatacaaattccttgctatacaagttttataatttagtggtctgtttagctaatgtcatttgat |
36208642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Complemental strand, 36215610 - 36215577
Alignment:
| Q |
293 |
tccttggaatacaagttttataatttagtagtct |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
36215610 |
tccttggaatacaagttttataatttagtagtct |
36215577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 293 - 396
Target Start/End: Complemental strand, 36197909 - 36197806
Alignment:
| Q |
293 |
tccttggaatacaagttttataatttagtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattatgctttagatgat |
392 |
Q |
| |
|
||||||| || |||||||||||| ||||||||| ||||| | |||||||||||| ||||| || ||| ||||||| ||||||| |||||||||| |
|
|
| T |
36197909 |
tccttgggatgcaagttttataacatagtagtctttttggctaatgtcatttgatcctatccaaaatctcttaaacaattaccattatgttttagatgat |
36197810 |
T |
|
| Q |
393 |
agac |
396 |
Q |
| |
|
|||| |
|
|
| T |
36197809 |
agac |
36197806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 36214346 - 36214279
Alignment:
| Q |
156 |
aaagtttaatttagatttttgaatattaacttggagtgcaaggctatgctttgacctgataaataatt |
223 |
Q |
| |
|
||||||| ||||||| ||||| ||| | | |||||||| ||| ||||| ||||||||||||||||||| |
|
|
| T |
36214346 |
aaagtttcatttagaattttggatactgatttggagtgtaagtctatgttttgacctgataaataatt |
36214279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 36190632 - 36190546
Alignment:
| Q |
139 |
gtagctgttttattttcaaagtttaatttagatttttgaatattaacttggagtgcaaggctatgctttgacctgataaataattgt |
225 |
Q |
| |
|
|||| ||||||||||||||||||||||||| | ||||| ||||| | | ||||| ||||||||| ||| | |||||| ||||||| |
|
|
| T |
36190632 |
gtagttgttttattttcaaagtttaatttaaaattttggatattgatctagagtgtaaggctatgttttaatatgataagtaattgt |
36190546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 413
Target Start/End: Complemental strand, 36214199 - 36214079
Alignment:
| Q |
293 |
tccttggaatacaagttttataattt-agtagtctgtttggttgatgtcatttgatactatctcaactcttttaaacaccattcattatgctttagatga |
391 |
Q |
| |
|
|||| ||||||||||||| ||||||| |||||| ||||||| | |||||||||||| |||||| ||||||||||| | | || || ||||| | | |
|
|
| T |
36214199 |
tcctcggaatacaagttt-ataattttagtagtatgtttggctaatgtcatttgatcttatctcgtatcttttaaacaacttcaatcttgttttagttta |
36214101 |
T |
|
| Q |
392 |
tagactctgtagcttgatgttt |
413 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
36214100 |
tagtctctgtagcttgatgttt |
36214079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University