View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11905_high_10 (Length: 249)
Name: NF11905_high_10
Description: NF11905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11905_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 42010699 - 42010929
Alignment:
| Q |
1 |
aaagagactaaccgtgctatacttcattctcaataggctaatttaaggtatgtctactcacgaattatgactgcactatctttcatgannnnnnnataaa |
100 |
Q |
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| T |
42010699 |
aaagagactaaccgtgctataattcattctcaataggctaatttaaggtatgtctgctcacgaattatgactgcactatctttcatgatttttttataaa |
42010798 |
T |
|
| Q |
101 |
tagttcttaaatattaaatacattgtacagacaaaatgaaaaagactaatatgacatgcttttatatatattttaaatattaaatatgaaagagac---t |
197 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
42010799 |
tagttattaaatattaaatacattgtacagacaaaatgaaaaagactaatgtgacatgcttttatatatattttaaatattaaatatgaaagagactagt |
42010898 |
T |
|
| Q |
198 |
aattttttaggcacttaattaatggtttaca |
228 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
42010899 |
aattttttaggcacttaattaatggtttaca |
42010929 |
T |
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