View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11906_low_1 (Length: 952)
Name: NF11906_low_1
Description: NF11906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11906_low_1 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 848; Significance: 0; HSPs: 23)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 848; E-Value: 0
Query Start/End: Original strand, 17 - 945
Target Start/End: Original strand, 25469206 - 25470134
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
25469206 |
catgaaaaagaatgtatctatgagccatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccattttagccaaaaac |
25469305 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
216 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469306 |
acggggattctcaaaataaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
25469405 |
T |
|
| Q |
217 |
attatttatcctcaaaaatattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatatt |
316 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
25469406 |
attatttatcctcaaaaatattactatgtttttgggaaacgcggtcaatgtttgctgcattggtccaaaatcttctgagtccaagtatagttataatatt |
25469505 |
T |
|
| Q |
317 |
ttagcttgttctaagatgagtaagctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattc |
416 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469506 |
ttagcttgttctaagatgagtgagctgaaatttcacacttttgcgaagaatgtccaacgggttactttgaaaactctttcatcaaagttccttgtgattc |
25469605 |
T |
|
| Q |
417 |
catttggtttttctgaacctctcgagatagaaatttgcatcagatcacttccttgtgattccatggtacctcctatatccttttctttactttgnnnnnn |
516 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469606 |
catttggtttttctgaacctctcgagatagaaatttgcatcagatcatttccttgtgattccatggtacctcctatatccttttctttactttgtttttt |
25469705 |
T |
|
| Q |
517 |
ncccctattaaattcttctatcattgattactgtgttggcaattgtggtacagatgcaaatattcataaagaagctggatggaaaggtgttacccttgag |
616 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469706 |
tcccctattaaattcttctatcattgattactgtgttggcaattgtggtacagatgcaaatattcataaagaagctggatggaaaggtgttacccttgag |
25469805 |
T |
|
| Q |
617 |
ggttaagagttcagacacgatatacagtgtgaaggagaagatttttaacaaggaaaagtacgcaataatcgatcaacgtctgatcttttccggtaatcaa |
716 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469806 |
ggttaagagttcagacacgatatacagtgtgaaggagaagatttttaacaaggaaaagtacgcaataatcgatcaacgtctgatcttttccggtaatcaa |
25469905 |
T |
|
| Q |
717 |
ctacctgatgatcagaccattgccaattgcaacatcgaagagaagtcagccatcttcctcgtctttcgcctcatgggcgactagacgacaaccaaaccat |
816 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25469906 |
ctacctgatcatcagaccattgccaattgcaacatcgaagagaagtcagccatcttcctcgtctttcgcctcatgggcgactagacgacaaccaaaccat |
25470005 |
T |
|
| Q |
817 |
cggtgattactacatccaagagcaggcaaccatcaacctcatcatccgctgccatcggcgacctgtatcatgaagacaatcaccctataagtagaaaatt |
916 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25470006 |
cggtgattactacatccaagagcaggcaaccatcaacctcatcatccgctgccatcggcgacctgtatcatgaagacaatcaccctataagtagaaaatt |
25470105 |
T |
|
| Q |
917 |
aatatattattgataacatatagcctatg |
945 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
25470106 |
aatatattattgataacatatagcctatg |
25470134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 17 - 456
Target Start/End: Original strand, 32762631 - 32763070
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
|||||| | ||||| ||||| || ||||||||||||||| |||||||||||||||| | |||||||||||||||| |||||| |||| ||| ||| |||| |
|
|
| T |
32762631 |
catgaagaggaatgcatctacgaactatgttactgccccctttcaggttgtgactttgctgcatcatcagaagtgttgtccaaccatgtcagccataaac |
32762730 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
216 |
Q |
| |
|
|| ||||||||| | |||||||||||||| | ||||||||||||||||||||| ||||||||||||||| |||| ||||||||| |||| |||||| | |
|
|
| T |
32762731 |
acagggattctcacatcaaattttcttatggtggctccttcattgtctccttgaagtctaatgatgaaaccattgtccttcaagaggaaaatgatggcaa |
32762830 |
T |
|
| Q |
217 |
attatttatcctcaaaaatattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatatt |
316 |
Q |
| |
|
| | ||||| ||||| |||| |||| ||||| ||||| ||||||||| |||||||| | ||||| || ||||||||||| |||||||||| |||| |
|
|
| T |
32762831 |
actgtttattctcaataatagaactacacttttaggaaatgcagtcaatatttgctgcctcggtcctaactcttctgagtctgagtatagttatgatata |
32762930 |
T |
|
| Q |
317 |
ttagcttgttctaagatgagtaagctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattc |
416 |
Q |
| |
|
|| ||| | ||| |||| | || ||| |||| || | ||||||||||| ||||||| ||| |||| ||||||||||||| |||| |||||||||| |
|
|
| T |
32762931 |
ttggctagctctcagatatgcaaactgaaattacagtcttttgtgaagaacgtccaacgtgttgctttagcaactctttcatcagagtttcttgtgattc |
32763030 |
T |
|
| Q |
417 |
catttggtttttctgaacctctcgagatagaaatttgcat |
456 |
Q |
| |
|
|||||| || ||| ||||||||| || |||| |||||||| |
|
|
| T |
32763031 |
catttgcttcttccgaacctctcaagctagatatttgcat |
32763070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 43 - 453
Target Start/End: Original strand, 28474517 - 28474927
Alignment:
| Q |
43 |
atgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaacacggggattctcgaaacaaattttct |
142 |
Q |
| |
|
|||||||||||| |||| ||||||||||| | |||||||||||||||| |||||| |||||||| ||| ||||| ||||||||||||| |||||||||| |
|
|
| T |
28474517 |
atgttactgccctctttctggttgtgactttgctgcatcatcagaagtgttgtccaaccatttcagccataaacatggggattctcgaatcaaattttct |
28474616 |
T |
|
| Q |
143 |
tatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggccaattatttatcctcaaaaatattacta |
242 |
Q |
| |
|
|||| ||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||| ||| || ||| || ||||||| ||||| |||| || | |
|
|
| T |
28474617 |
tatggtcactccttcaatgtctctttgaagtctaatgatgaaaccattgttcttcaagaggaaactgagggcaaactatttattctcaataatagaacca |
28474716 |
T |
|
| Q |
243 |
tgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatattttagcttgttctaagatgagtaagct |
342 |
Q |
| |
|
||||||||||| | ||||||| |||||||||||||||| || |||||||||||| |||||||||| |||| || ||| | ||| |||| | || || |
|
|
| T |
28474717 |
cacttttgggaaatggagtcaatatttgctgcattggtcctaactcttctgagtccgagtatagttatgatatattggctaggtctcagatatgcaaact |
28474816 |
T |
|
| Q |
343 |
ggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattccatttggtttttctgaacctctcgag |
442 |
Q |
| |
|
| || || | ||||||||||| |||||| ||||| |||| ||||| ||||||| |||| ||||||||||||||||||| ||| ||||||||| || |
|
|
| T |
28474817 |
gactttacagtcttttgtgaagaacgtccaagaggttgctttagcaactccttcatcagagttgcttgtgattccatttggttcttccgaacctctcaag |
28474916 |
T |
|
| Q |
443 |
atagaaatttg |
453 |
Q |
| |
|
|||| ||||| |
|
|
| T |
28474917 |
ctagatatttg |
28474927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 15 - 456
Target Start/End: Original strand, 32739719 - 32740160
Alignment:
| Q |
15 |
atcatgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaa |
114 |
Q |
| |
|
|||||||||| ||||| ||| || ||| ||||||||| ||||||||||| |||||||| |||| ||||||||||||| |||| | |||||| ||| || |
|
|
| T |
32739719 |
atcatgaaaacgaatgcatccataagccatgttactgtcccttttcaggatgtgactttgttgaatcatcagaagtgttgtctatgcatttctgccataa |
32739818 |
T |
|
| Q |
115 |
acacggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggc |
214 |
Q |
| |
|
||| |||||||| | || |||||||||| ||| ||| |||||| || |||||||||| ||||||||||||||| ||||||||| |||| |||| |||| | |
|
|
| T |
32739819 |
acatggggattcgcaaatcaaattttctaatggtcaatccttcgttatctccttgaagtctaatgatgaaaccattgttcttcgagaggaaaatgatgac |
32739918 |
T |
|
| Q |
215 |
caattatttatcctcaaaaatattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataata |
314 |
Q |
| |
|
|| ||||||| ||||| |||| ||||| | | || ||||| || |||||| |||||||| |||||||| | |||||||||| ||||||||| ||| |
|
|
| T |
32739919 |
aaactatttattctcaataatagtactacgttgttaggaaatgctgtcaatatttgctgctttggtccagacgcttctgagtctgagtatagttacgata |
32740018 |
T |
|
| Q |
315 |
ttttagcttgttctaagatgagtaagctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgat |
414 |
Q |
| |
|
| || ||| ||| |||| |||| ||| |||| ||| | |||| ||||||||||||||| ||||||| || |||||||||||||||||||||||| |
|
|
| T |
32740019 |
tattggctacgtctcagatatgtaaactgaaattacactcttttgccaagaatgtccaacagattactttagcaaatctttcatcaaagttccttgtgat |
32740118 |
T |
|
| Q |
415 |
tccatttggtttttctgaacctctcgagatagaaatttgcat |
456 |
Q |
| |
|
||||||| ||| ||||||||||||| || ||||||||||||| |
|
|
| T |
32740119 |
tccatttagttcttctgaacctctcaagttagaaatttgcat |
32740160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 41 - 456
Target Start/End: Original strand, 32767555 - 32767970
Alignment:
| Q |
41 |
ctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaacacggggattctcgaaacaaatttt |
140 |
Q |
| |
|
||||||||||||||| ||| |||||||| ||| | |||| ||||||||||| |||||| |||||||| || ||||||| || |||||| || ||||||| |
|
|
| T |
32767555 |
ctatgttactgccccattttaggttgtggctttgctgcaacatcagaagtgttgtccaaccatttcagccgaaaacaccggaattctcaaatcaaattta |
32767654 |
T |
|
| Q |
141 |
cttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggccaattatttatcctcaaaaatattac |
240 |
Q |
| |
|
||||| ||||||||||||||||||||| || || |||||| || || |||||||||| ||| |||| |||||| || ||||||| ||||| |||| ||| |
|
|
| T |
32767655 |
attatggtcactccttcattgtctccttaaagtccaatgatcaagccattgttcttcaggaggaaaatgatggcaaactatttattctcaataatagtac |
32767754 |
T |
|
| Q |
241 |
tatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatattttagcttgttctaagatgagtaag |
340 |
Q |
| |
|
||| ||||| ||||| |||||| || |||||||||||||||| || || ||||||||| |||||||||| |||| || ||| | ||| ||| | || |
|
|
| T |
32767755 |
tatacttttaggaaatgcagtctatatttgctgcattggtcctaactcctctgagtccgagtatagttatgatatattggctaggtctcagacatgcaaa |
32767854 |
T |
|
| Q |
341 |
ctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattccatttggtttttctgaacctctcg |
440 |
Q |
| |
|
||| |||| || | |||||||| |||||||| ||| ||||||| ||||||| ||||| || |||||||||||||| |||| | ||||||||| ||| |
|
|
| T |
32767855 |
ctgaaattacagtcttttgtgaaaaatgtccagcagtttactttagcaactcttccatcagagctccttgtgattccagttggctcttctgaaccactca |
32767954 |
T |
|
| Q |
441 |
agatagaaatttgcat |
456 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
32767955 |
agctagaaatttgcat |
32767970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 535 - 809
Target Start/End: Original strand, 25477683 - 25477957
Alignment:
| Q |
535 |
tatcattgattactgtgttggcaattgtggtacagatgcaaatattcataaagaagctggatggaaaggtgttacccttgagggttaagagttcagacac |
634 |
Q |
| |
|
|||||||||||| |||||||||||||| ||| ||||||| |||||||||||||| |||| | |||||| | |||||||||||||||||||||||||| |
|
|
| T |
25477683 |
tatcattgattaatgtgttggcaattgcggtgcagatgctaatattcataaagaccatggaaagtaaggtgatccccttgagggttaagagttcagacac |
25477782 |
T |
|
| Q |
635 |
gatatacagtgtgaaggagaagatttttaacaaggaaaagtacgcaataatcgatcaacgtctgatcttttccggtaatcaactacctgatgatcagacc |
734 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||| | | | ||||||||||||||| ||||||||||| |||||| || |||||| |
|
|
| T |
25477783 |
gatagacagtgtgaaggagaagatttttgacaaggaaaagtaccaagtgaacgatcaacgtctgatattttccggtaagcaactagacgactgccagacc |
25477882 |
T |
|
| Q |
735 |
attgccaattgcaacatcgaagagaagtcagccatcttcctcgtctttcgcctcatgggcgactagacgacaacc |
809 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| ||||| |||| |||| ||| ||| || ||||||||||||||| |
|
|
| T |
25477883 |
attgccaattacaacatccaagagaagtcaaccatccacctcatcttgcgcaccattggggactagacgacaacc |
25477957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 17 - 278
Target Start/End: Complemental strand, 32558335 - 32558074
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
|||||| ||||||| ||||||| || ||||||||| ||| || ||||||||| || ||||| |||| ||||||| |||||| |||||||| ||| |||| |
|
|
| T |
32558335 |
catgaagaagaatgcatctatgtgccatgttactgtcccgttaaaggttgtgattttgttgcctcattagaagtgttgtccaaccatttcaaccataaac |
32558236 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
216 |
Q |
| |
|
||||||| |||| || | |||||||||||| ||||||||||| |||||| |||||||||||||||||| | | ||||||||||||| |||| ||||| | |
|
|
| T |
32558235 |
acggggactctctaatcgaattttcttatggtcactccttcactgtctcgttgaattctaatgatgaagctgctgttcttcaagaggaaaatgatgggaa |
32558136 |
T |
|
| Q |
217 |
attatttatcctcaaaaatattactatgcttttgggaaacgcagtcaatgtttgctgcattg |
278 |
Q |
| |
|
| |||||| ||||| |||| |||||||||| ||||||| ||||||||| || ||||||||| |
|
|
| T |
32558135 |
actatttactctcaataatagtactatgcttctgggaaatgcagtcaatattagctgcattg |
32558074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 34 - 435
Target Start/End: Original strand, 32857909 - 32858298
Alignment:
| Q |
34 |
ctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaacacggggattctcgaaac |
133 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||| |||||||||||| | |||||||| | |||||| ||||||||| || | |
|
|
| T |
32857909 |
ctatgagccatgttactgccccctttcaggttgtgactttgttgcatcatcaaa------------ccatttcagctttaaacacagggattctcaaatc |
32857996 |
T |
|
| Q |
134 |
aaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggccaattatttatcctcaaaa |
233 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||| ||||| | ||||||| ||||||||||| || |||| |||||| || ||||||| ||||| | |
|
|
| T |
32857997 |
caattttcgtatggtcactccttcattgtctccttgaagtctaaagttgaaaccattgttcttcaaaaggaaaatgatggcaaactatttattctcaata |
32858096 |
T |
|
| Q |
234 |
atattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatattttagcttgttctaagat |
333 |
Q |
| |
|
||| |||| || ||| ||||| ||||| ||| |||| ||||||||||| || |||| ||| |||| |||||||| | |||| | ||| | ||| |||| |
|
|
| T |
32858097 |
atagtactctgagtttaggaaatgcagttaatatttgttgcattggtcctaactcttgtgaatccaagtatagttctgatatatcggctaggtctcagat |
32858196 |
T |
|
| Q |
334 |
gagtaagctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattccatttggtttttctgaa |
433 |
Q |
| |
|
| || || |||| || | |||||||| | ||||||| | ||||||| ||||||||||||| ||| |||||||||||||||||||| || |||| |
|
|
| T |
32858197 |
atgcaaattgaaattacagtcttttgtgaaatacgtccaacggtttactttagcaactctttcatcagagtgccttgtgattccatttggttcttttgaa |
32858296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 15 - 290
Target Start/End: Complemental strand, 32656537 - 32656262
Alignment:
| Q |
15 |
atcatgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaa |
114 |
Q |
| |
|
|||||||||||||||| ||| ||| || |||||||| || ||||| |||||| ||| ||||||||||| |||||| |||| | ||||||| | | || |
|
|
| T |
32656537 |
atcatgaaaaagaatgcatccatgtgccctgttactgtcctatttcaagttgtggctttgttgcatcatccgaagtgttgtctaagcatttcagcgataa |
32656438 |
T |
|
| Q |
115 |
acacggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggc |
214 |
Q |
| |
|
|||| |||||||| || |||||||||||||| | ||||||||| |||||||||||| ||||| ||||||||| ||||| |||||||| ||| ||||| |
|
|
| T |
32656437 |
acacaaggattctcaaatcaaattttcttatggtgactccttcaatgtctccttgaagtctaaggatgaaaccattgtttttcaagaggaaagttatggc |
32656338 |
T |
|
| Q |
215 |
caattatttatcctcaaaaatattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatctt |
290 |
Q |
| |
|
|| ||||||| ||||| |||| ||| |||||||||||| || ||||| ||||||| ||||||||||| |||| |
|
|
| T |
32656337 |
aaactatttattctcaataatagagctacgcttttgggaaatgctatcaatatttgctgtattggtccaaactctt |
32656262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 32709820 - 32710005
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
|||||| |||||||||| |||| || ||||||||| ||| |||||||||||||||| ||||| |||||||||||| |||||| ||||||| ||| |||| |
|
|
| T |
32709820 |
catgaagaagaatgtatgtatgtgccatgttactgtcccctttcaggttgtgactttgttgcctcatcagaagtgttgtccaatcatttcagccataaac |
32709919 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagag |
202 |
Q |
| |
|
|| ||||| || || || ||||||||||| ||||||||||||||||||||| || | |||||| ||| || |||||||||||||| |
|
|
| T |
32709920 |
acaaggattttcaaagcacattttcttatggtcactccttcattgtctccttaaagtttaatgacgaagccattgttcttcaagag |
32710005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 17 - 456
Target Start/End: Complemental strand, 32652280 - 32651841
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
|||||||||||||| ||| ||| || |||||||||||| || || ||||| |||| |||||||||||||||||||||| | ||||||| | | |||| |
|
|
| T |
32652280 |
catgaaaaagaatgcatccatgcgccatgttactgccctgttccaagttgtcactttgttgcatcatcagaagtgctgtataagcatttcagcaataaac |
32652181 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
216 |
Q |
| |
|
| ||||| ||| || |||||||| ||||| ||| |||||||||||||||||||| ||||| ||| ||||| ||||| |||||||| ||||| | |
|
|
| T |
32652180 |
aaagggatactcaaatcaaatttttttatggtcattccttcattgtctccttgaagtctaacgatcaaaccattgtttttcaagaggcgggttatggcaa |
32652081 |
T |
|
| Q |
217 |
attatttatcctcaaaaatattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatatt |
316 |
Q |
| |
|
| ||||| |||| |||| ||||||| ||||||| ||||||||| ||||| ||||||||||||| | || ||||| ||||||||| |||| |
|
|
| T |
32652080 |
actatttgatctcagtaataaaactatgcaaatgggaaatgcagtcaatatttgcggcattggtccaaacttttacgagtctgaatatagttatgatata |
32651981 |
T |
|
| Q |
317 |
ttagcttgttctaagatgagtaagctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattc |
416 |
Q |
| |
|
|| ||| | ||| ||||| | || ||| |||| || | |||| ||| || |||||| ||||||| || |||||||||| ||||||||||||||| |
|
|
| T |
32651980 |
ttggctaggtctgagatgtgcaaactgaaattacagtcttttggtaaggatttccaacgtgttacttcagcaaatctttcatcagagttccttgtgattc |
32651881 |
T |
|
| Q |
417 |
catttggtttttctgaacctctcgagatagaaatttgcat |
456 |
Q |
| |
|
||||||||| |||||||||||| || ||||||||||||| |
|
|
| T |
32651880 |
catttggttcttctgaacctctgaagctagaaatttgcat |
32651841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 17 - 290
Target Start/End: Complemental strand, 32662422 - 32662149
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
|||||| ||||||| ||| ||| || ||||| |||||| ||||| | |||||||| |||||||||||||||||| |||| | ||||||| | | |||| |
|
|
| T |
32662422 |
catgaagaagaatgcatccatgtgccatgttgctgccctgtttcaagctgtgactttgttgcatcatcagaagtgttgtctaagcatttcagcgataaac |
32662323 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
216 |
Q |
| |
|
|||||||||||| | |||||||||||||| ||||||||| ||||||| | | || ||||||||||||||| ||||| |||||||| ||| ||||| | |
|
|
| T |
32662322 |
acggggattctcatatcaaattttcttatggtcactccttaattgtctacatcaagtctaatgatgaaaccattgtttttcaagaggaaacttatggcaa |
32662223 |
T |
|
| Q |
217 |
attatttatcctcaaaaatattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatctt |
290 |
Q |
| |
|
| ||||||| ||| | |||| ||| ||||||||||| || ||||| ||||||| ||||||||||| |||| |
|
|
| T |
32662222 |
actatttattctctataatagagctacacttttgggaaatgctatcaatatttgctgtattggtccaaactctt |
32662149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 812 - 911
Target Start/End: Complemental strand, 32651276 - 32651177
Alignment:
| Q |
812 |
accatcggtgattactacatccaagagcaggcaaccatcaacctcatcatccgctgccatcggcgacctgtatcatgaagacaatcaccctataagtaga |
911 |
Q |
| |
|
||||||| |||||||| ||||||||| || ||||| || ||||||||||| |||||||||||| ||| ||||| ||||||| |||||||||||||||| |
|
|
| T |
32651276 |
accatcgccgattactatatccaagagaagtcaaccgtccacctcatcatctgctgccatcggcaaccgttatcacgaagacagtcaccctataagtaga |
32651177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 876 - 945
Target Start/End: Original strand, 25477983 - 25478052
Alignment:
| Q |
876 |
gacctgtatcatgaagacaatcaccctataagtagaaaattaatatattattgataacatatagcctatg |
945 |
Q |
| |
|
|||| ||||||| |||||||||||| ||||||||||||| | |||||||||||||||||||||| ||||| |
|
|
| T |
25477983 |
gacccgtatcattaagacaatcaccatataagtagaaaaatcatatattattgataacatatagtctatg |
25478052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 730 - 931
Target Start/End: Original strand, 32768464 - 32768665
Alignment:
| Q |
730 |
agaccattgccaattgcaacatcgaagagaagtcagccatcttcctcgtctttcgcctcatgggcgactagacgacaaccaaaccatcggtgattactac |
829 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| | | | ||||| | ||||| | || ||||||| || |||| | ||||| |||||||| |
|
|
| T |
32768464 |
agacccttgccaattgcaacatccaagagaagtcaatcctgcacgtcgtcatccgccttactggggactagatgatcaccacatcatcgctgattactgt |
32768563 |
T |
|
| Q |
830 |
atccaagagcaggcaaccatcaacctcatcatccgctgccatcggcgacctgtatcatgaagacaatcaccctataagtagaaaattaatatattattga |
929 |
Q |
| |
|
| |||||||||||| || || |||||||| | || ||| |||| |||| |||||||||||||| |||||||||||||| ||| ||||| |||||||| |
|
|
| T |
32768564 |
tttcaagagcaggcagccgtccacctcatcgtttgccgccgtcggggacccttatcatgaagacaaacaccctataagtagtaaagtaatacattattga |
32768663 |
T |
|
| Q |
930 |
ta |
931 |
Q |
| |
|
|| |
|
|
| T |
32768664 |
ta |
32768665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 538 - 674
Target Start/End: Complemental strand, 32660796 - 32660658
Alignment:
| Q |
538 |
cattgattactgtgttggcaattgtggtacagatgcaaatattcataaagaagctggatggaaaggtgttacccttgagggttaagagttcagacacgat |
637 |
Q |
| |
|
||||||||| |||||||||||||| | | ||||||||||| ||||||| || || | ||||| | |||||||||||||| |||||| |||| || |
|
|
| T |
32660796 |
cattgattaatgtgttggcaattgcgatgcagatgcaaattttcataatgaccatgactagaaagaatatccccttgagggttaatagttcatacacaat |
32660697 |
T |
|
| Q |
638 |
ata--cagtgtgaaggagaagatttttaacaaggaaaag |
674 |
Q |
| |
|
||| |||||||||||||||||||||| || |||||||| |
|
|
| T |
32660696 |
ataatcagtgtgaaggagaagatttttgacgaggaaaag |
32660658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 537 - 588
Target Start/End: Original strand, 32748035 - 32748086
Alignment:
| Q |
537 |
tcattgattactgtgttggcaattgtggtacagatgcaaatattcataaaga |
588 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
32748035 |
tcattgattaatgtgttggcaattgcggtgcagatgcaaatattcataaaga |
32748086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 537 - 588
Target Start/End: Original strand, 32752079 - 32752130
Alignment:
| Q |
537 |
tcattgattactgtgttggcaattgtggtacagatgcaaatattcataaaga |
588 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
32752079 |
tcattgattaatgtgttggcaattgcggcacagatgcaaatattcataaaga |
32752130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 712
Target Start/End: Original strand, 32858859 - 32858955
Alignment:
| Q |
616 |
gggttaagagttcagacacgatatacagtgtgaaggagaagatttttaacaaggaaaagtacgcaataatcgatcaacgtctgatcttttccggtaa |
712 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||| |||| || |||||||||| | ||||| || ||||||||||| ||||||||||| |
|
|
| T |
32858859 |
gggttaagagttcagacacgatagtcaatgtgaaggagatgattcttgacaaggaaaaattaccaatacacggccaacgtctgatattttccggtaa |
32858955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 510
Target Start/End: Original strand, 25477534 - 25477567
Alignment:
| Q |
477 |
ccatggtacctcctatatccttttctttactttg |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
25477534 |
ccatggtacctcctatatccttttctttactttg |
25477567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 536 - 584
Target Start/End: Complemental strand, 32655820 - 32655772
Alignment:
| Q |
536 |
atcattgattactgtgttggcaattgtggtacagatgcaaatattcata |
584 |
Q |
| |
|
|||| |||||| |||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
32655820 |
atcactgattaatgtgttggcaattgcggtgcagatgcaaatattcata |
32655772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 388 - 456
Target Start/End: Complemental strand, 32656164 - 32656096
Alignment:
| Q |
388 |
aactctttcatcaaagttccttgtgattccatttggtttttctgaacctctcgagatagaaatttgcat |
456 |
Q |
| |
|
||||||||| || |||| ||||||||||||||||||| || |||| ||||| || ||||||||||||| |
|
|
| T |
32656164 |
aactctttcgtcggagttgcttgtgattccatttggttcttttgaagctctcaagctagaaatttgcat |
32656096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 510
Target Start/End: Original strand, 32740175 - 32740208
Alignment:
| Q |
477 |
ccatggtacctcctatatccttttctttactttg |
510 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |
|
|
| T |
32740175 |
ccatggtacctcctatatccttttctttgctttg |
32740208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 156; Significance: 2e-82; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 17 - 456
Target Start/End: Complemental strand, 7970361 - 7969922
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
|||||| ||||||| ||||||| | ||||||||| ||| |||||||||||||||| ||||| |||||||||||| |||||| |||||||| ||| |||| |
|
|
| T |
7970361 |
catgaagaagaatgcatctatgtaccatgttactgtcccctttcaggttgtgactttgttgcgtcatcagaagtgttgtccaaccatttcagccataaac |
7970262 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
216 |
Q |
| |
|
| |||||||||| || | |||||||||||| ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||| || || | |
|
|
| T |
7970261 |
atggggattctcaaatcgaattttcttatggtcactccttcattgtctccttgatgtctaatggtgaaaccattgttcttcaagaggaaaatgacggaaa |
7970162 |
T |
|
| Q |
217 |
attatttatcctcaaaaatattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatatt |
316 |
Q |
| |
|
| ||||||| || || || | ||||||| ||||||||| ||||||||| |||||||||||||||| || ||||||| |||| |||||||||| |||| |
|
|
| T |
7970161 |
actatttattctaaataacaatactatgagtttgggaaaagcagtcaatatttgctgcattggtcctaactcttctgggtccgagtatagttatgatata |
7970062 |
T |
|
| Q |
317 |
ttagcttgttctaagatgagtaagctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattc |
416 |
Q |
| |
|
| ||| ||| |||| | || ||| |||| || | |||| |||||| ||||||||| ||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
7970061 |
tcggctaagtctgagatatgcaaactgaaattacagtcttttgcgaagaacgtccaacagtttactttagcaactctttcatcagagttccttgtgattc |
7969962 |
T |
|
| Q |
417 |
catttggtttttctgaacctctcgagatagaaatttgcat |
456 |
Q |
| |
|
||||| ||| ||||||||||||| || |||| |||||||| |
|
|
| T |
7969961 |
catttcgttcttctgaacctctcaagctagacatttgcat |
7969922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 17 - 456
Target Start/End: Original strand, 37576750 - 37577189
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
|||||| || |||| ||| |||||| ||||||||||| | ||| ||||||||| |||||||||||||||||| |||| | ||||||| ||| |||| |
|
|
| T |
37576750 |
catgaagaacaatgcatccatgagccgtgttactgccctctgccagattgtgactttgttgcatcatcagaagtgttgtctaagcatttcagccataaac |
37576849 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
216 |
Q |
| |
|
|||||||||||| | ||| |||||||||| || ||| | |||||||||||||| |||||||||||||| |||||||||||||||| || | |||| | |
|
|
| T |
37576850 |
acggggattctcagaccaagttttcttatggtctgtccgttattgtctccttgaagtctaatgatgaaactattgttcttcaagagaataatgttggcaa |
37576949 |
T |
|
| Q |
217 |
attatttatcctcaaaaatattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatatt |
316 |
Q |
| |
|
| ||||||| ||||| |||| |||||||||||| ||||| ||| ||||| |||| |||||| ||||||| |||||| ||| | || | ||||| |||| |
|
|
| T |
37576950 |
actatttattctcaataatagtactatgctttttggaaatgcaatcaatatttgttgcattagtccaaagtcttctcagtacgagtgtggttatgatata |
37577049 |
T |
|
| Q |
317 |
ttagcttgttctaagatgagtaagctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattc |
416 |
Q |
| |
|
|| ||| | ||| | | || | | ||||||| | |||| ||||||||| |||| | ||||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
37577050 |
ttggctagatctcaagcatgcaaaccgaaatttcagtcgtttgcgaagaatgtgcaacggtttactttatcaactctttcattagagttccttgtgattc |
37577149 |
T |
|
| Q |
417 |
catttggtttttctgaacctctcgagatagaaatttgcat |
456 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
37577150 |
catttggttcttctgaacctctcgagctagaaatttgcat |
37577189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 539 - 659
Target Start/End: Original strand, 32895003 - 32895123
Alignment:
| Q |
539 |
attgattactgtgttggcaattgtggtacagatgcaaatattcataaagaagctggatggaaaggtgttacccttgagggttaagagttcagacacgata |
638 |
Q |
| |
|
|||||||| |||||||||||||| ||| |||||||||||||||||| ||| | || |||| || ||| ||| ||| ||||||||||||||||| |||| |
|
|
| T |
32895003 |
attgattaatgtgttggcaattgcggtgcagatgcaaatattcatagagacccagggtggagagaggttccccctgatggttaagagttcagacaggata |
32895102 |
T |
|
| Q |
639 |
tacagtgtgaaggagaagatt |
659 |
Q |
| |
|
| || ||| | |||||||||| |
|
|
| T |
32895103 |
ttcaatgtaatggagaagatt |
32895123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 822 - 925
Target Start/End: Complemental strand, 7969335 - 7969232
Alignment:
| Q |
822 |
attactacatccaagagcaggcaaccatcaacctcatcatccgctgccatcggcgacctgtatcatgaagacaatcaccctataagtagaaaattaatat |
921 |
Q |
| |
|
||||||| |||||| ||||||||| |||| ||||||||||| || | ||||| ||| | |||||||||||||| ||||||||||||| || ||||| |
|
|
| T |
7969335 |
attactaaatccaaaagcaggcaatcatccacctcatcatctgccactgtcggcaacccttgtcatgaagacaatctccctataagtagagaaataatac |
7969236 |
T |
|
| Q |
922 |
atta |
925 |
Q |
| |
|
|||| |
|
|
| T |
7969235 |
atta |
7969232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 882 - 936
Target Start/End: Original strand, 32895282 - 32895336
Alignment:
| Q |
882 |
tatcatgaagacaatcaccctataagtagaaaattaatatattattgataacata |
936 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | ||| |||||||||| |||| |
|
|
| T |
32895282 |
tatcatgaagacaatcagcctataagtagaaaagtcatacattattgatagcata |
32895336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 821 - 935
Target Start/End: Original strand, 37577766 - 37577880
Alignment:
| Q |
821 |
gattactacatccaagagcaggcaaccatcaacctcatcatccgctgccatcggcgacctgtatcatgaagacaatcaccctataagtagaaaattaata |
920 |
Q |
| |
|
||||| |||||||||||||| |||||| || ||||||| || || ||| | || |||| | ||||||||||||||||| ||||||| || || | ||| |
|
|
| T |
37577766 |
gattaatacatccaagagcatgcaaccgtccacctcattgtctgccgccgttggtgacccttgtcatgaagacaatcaccatataagttgagaagtcata |
37577865 |
T |
|
| Q |
921 |
tattattgataacat |
935 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
37577866 |
cattattgataacat |
37577880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 822 - 861
Target Start/End: Original strand, 32895248 - 32895287
Alignment:
| Q |
822 |
attactacatccaagagcaggcaaccatcaacctcatcat |
861 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
32895248 |
attactacatccaagagcaggcaaccatccaccttatcat |
32895287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 661
Target Start/End: Complemental strand, 7969547 - 7969502
Alignment:
| Q |
616 |
gggttaagagttcagacacgatatacagtgtgaaggagaagatttt |
661 |
Q |
| |
|
||||||||||||||||||| ||| || |||||||||||||||||| |
|
|
| T |
7969547 |
gggttaagagttcagacacaataggcaatgtgaaggagaagatttt |
7969502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 152; Significance: 5e-80; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 41 - 456
Target Start/End: Original strand, 17591062 - 17591477
Alignment:
| Q |
41 |
ctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaacacggggattctcgaaacaaatttt |
140 |
Q |
| |
|
||||||||||||||| ||||||| |||||||| | |||||||||||||||| |||||| |||||||| || ||||| ||||||||| || |||||||| |
|
|
| T |
17591062 |
ctatgttactgccccctttcaggatgtgactttgctgcatcatcagaagtgttgtccaaccatttcaggcataaacatggggattctataatcaaatttt |
17591161 |
T |
|
| Q |
141 |
cttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggccaattatttatcctcaaaaatattac |
240 |
Q |
| |
|
|||||| | ||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||| ||||| || ||||||| ||||| |||| || |
|
|
| T |
17591162 |
cttatggttactccttcactgtctccttgaagtctaatgatgaaattattgttcttcaagaggaaaatgatggtaaactatttattctcaataatagaac |
17591261 |
T |
|
| Q |
241 |
tatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatattttagcttgttctaagatgagtaag |
340 |
Q |
| |
|
|| |||||||||||| ||||||||| |||||||||||||||| || ||||||||||||| |||| |||| |||| || ||| | ||| ||| | | |
|
|
| T |
17591262 |
tacgcttttgggaaatgcagtcaatctttgctgcattggtcctaactcttctgagtccaactataattatgatatattggctaggtctcagaattgcata |
17591361 |
T |
|
| Q |
341 |
ctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattccatttggtttttctgaacctctcg |
440 |
Q |
| |
|
||| |||| || | |||| |||||| |||||||| |||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
17591362 |
ctgaaattacagtcttttgcgaagaacgtccaacaagttactttagcaactctttcatcagagttgcttgtgattccatttggttcttctgaacctctca |
17591461 |
T |
|
| Q |
441 |
agatagaaatttgcat |
456 |
Q |
| |
|
|| |||| |||||||| |
|
|
| T |
17591462 |
agctagatatttgcat |
17591477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 43 - 456
Target Start/End: Original strand, 17583157 - 17583570
Alignment:
| Q |
43 |
atgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaacacggggattctcgaaacaaattttct |
142 |
Q |
| |
|
|||| |||||||| ||||||| |||||||| | |||||| |||||| || |||||| ||| |||| ||| ||||| || ||||||| || |||||||||| |
|
|
| T |
17583157 |
atgtgactgccccctttcaggatgtgactttgctgcatcgtcagaattgttgtccaaccacttcagccataaacatggtgattctcaaatcaaattttct |
17583256 |
T |
|
| Q |
143 |
tatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggccaattatttatcctcaaaaatattacta |
242 |
Q |
| |
|
|||| ||| ||||||| ||||||| |||| ||||||||||||||| |||||||||||||| |||| ||||| || ||||||| ||||| |||| | || |
|
|
| T |
17583257 |
tatggtcagtccttcactgtctccatgaagtctaatgatgaaaccattgttcttcaagaggaaaatgatggtaaactatttattctcaataatagaagta |
17583356 |
T |
|
| Q |
243 |
tgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatattttagcttgttctaagatgagtaagct |
342 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||||||| || |||||||||||| ||||||||| |||| || ||| | ||| |||| || || |
|
|
| T |
17583357 |
tgcttttgggaaatgcagtcaatctttgctgcattggtcctaactcttctgagtccgactatagttatgatatattggctaggtctcagatatccaaact |
17583456 |
T |
|
| Q |
343 |
ggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattccatttggtttttctgaacctctcgag |
442 |
Q |
| |
|
| |||| || | || |||||||| |||||||||||| |||| ||||||||||||| |||| ||||||||||||||||||| ||||||||||||| || |
|
|
| T |
17583457 |
gaaattacagtctttcgtgaagaacgtccaacaggttcctttagcaactctttcatcagagttgcttgtgattccatttggttcttctgaacctctcaag |
17583556 |
T |
|
| Q |
443 |
atagaaatttgcat |
456 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
17583557 |
ctagatatttgcat |
17583570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 825 - 932
Target Start/End: Original strand, 17592828 - 17592935
Alignment:
| Q |
825 |
actacatccaagagcaggcaaccatcaacctcatcatccgctgccatcggcgacctgtatcatgaagacaatcaccctataagtagaaaattaatatatt |
924 |
Q |
| |
|
|||| |||| || ||||||||| |||||||||||| ||||| | ||| ||||| |||||||||||||||| | ||||||||||| || | || ||| |
|
|
| T |
17592828 |
actagatccgagcgcaggcaacaatcaacctcatcgtccgccatcgtcgacgacccttatcatgaagacaatcgcactataagtagagaagtcatgcatt |
17592927 |
T |
|
| Q |
925 |
attgataa |
932 |
Q |
| |
|
|||||||| |
|
|
| T |
17592928 |
attgataa |
17592935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 122; Significance: 4e-62; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 34 - 315
Target Start/End: Original strand, 21524198 - 21524479
Alignment:
| Q |
34 |
ctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaacacggggattctcgaaac |
133 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||| |||| | |||||||| | |||||| ||||||||| || | |
|
|
| T |
21524198 |
ctatgagccatgttactgccccctttcaggttgtgactttgttgcatcatcagaagtgttgtcaaaccatttcagctttaaacacagggattctcaaatc |
21524297 |
T |
|
| Q |
134 |
aaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggccaattatttatcctcaaaa |
233 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||| ||||| | ||||||| |||||||||||||| |||| |||||| || ||||||| ||||| | |
|
|
| T |
21524298 |
aaattttcgtatggccactccttcattgtctccttgaagtctaaagttgaaaccattgttcttcaagaggaaaatgatggcaaactatttattctcaata |
21524397 |
T |
|
| Q |
234 |
atattactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatat |
315 |
Q |
| |
|
||| ||||||| ||| ||||| ||||| ||| |||| |||||||||| || |||| |||||||| |||||||||| |||| |
|
|
| T |
21524398 |
atagtactatgagtttaggaaatgcagttaatatttgttgcattggtcataactcttttgagtccaagtatagttatgatat |
21524479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 99; Significance: 2e-48; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 17 - 456
Target Start/End: Original strand, 16752106 - 16752551
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
|||||| || |||| ||||||| | |||||| |||||| ||||||||||||| || ||||| |||||||| ||| |||||| |||||||| | | |||| |
|
|
| T |
16752106 |
catgaagaaaaatgcatctatgtcccatgttattgccccatttcaggttgtgattttgttgcctcatcagaggtgttgtccaaccatttcagcaataaac |
16752205 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
216 |
Q |
| |
|
||| |||||||| || |||||||||||||| ||| || ||||||||||||||||| ||| ||||||| | || |||||||||||||| | |||||| | |
|
|
| T |
16752206 |
acgaggattctcaaatcaaattttcttatggtcaatctttcattgtctccttgaagtctgatgatgatgcaattattcttcaagagaaatatgatggcaa |
16752305 |
T |
|
| Q |
217 |
attatttatcctcaaaaatattactat------gcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttat |
310 |
Q |
| |
|
| ||||||| |||| |||| |||||| ||||||||| || ||||||||| |||||||| |||||||||| |||| |||||| |||||||||| |
|
|
| T |
16752306 |
actatttattctcattaatagtactatcactacgcttttggggaatgcagtcaatatttgctgctttggtccaaatgcttccgagtccgagtatagttat |
16752405 |
T |
|
| Q |
311 |
aatattttagcttgttctaagatgagtaagctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttg |
410 |
Q |
| |
|
||| || | ||| ||| | || ||| |||| ||| | ||||| | ||||||||||||||||||||| |||||||||| || |||||||| |
|
|
| T |
16752406 |
ggtatcaaggccaggtctcagagatgcaaactgaaattacactcttttgtaacgaatgtccaacaggttactttaggaactctttcaccagagttcctta |
16752505 |
T |
|
| Q |
411 |
tgattccatttggtttttctgaacctctcgagatagaaatttgcat |
456 |
Q |
| |
|
|||||||| ||||| ||| |||||||| || ||||||||||||| |
|
|
| T |
16752506 |
tgattccaaatggttcttccaaacctctcaagctagaaatttgcat |
16752551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 16756587 - 16756818
Alignment:
| Q |
17 |
catgaaaaagaatgtatctatgagctatgttactgccccttttcaggttgtgacttcgttgcatcatcagaagtgctgtccagccatttcatccaaaaac |
116 |
Q |
| |
|
|||||| ||||||| ||||||| || |||||| |||||| |||||||||||||||| ||||| |||||||| ||| ||||| |||||||| ||| |||| |
|
|
| T |
16756587 |
catgaagaagaatgcatctatgtgccatgttattgccccctttcaggttgtgactttgttgcttcatcagaggtgttgtccgaccatttcagccataaac |
16756686 |
T |
|
| Q |
117 |
acggggattctcgaaacaaattttcttatgatcactccttcattgtctccttgaattctaatgatgaaaccgttgttcttcaagagaaaaacgatggcca |
216 |
Q |
| |
|
||| |||||||| || ||| |||| ||||| || || ||||||||||||| ||| |||||||| | ||||||||||||||||| |||| | |
|
|
| T |
16756687 |
acgaggattctcaaatcaatttttattatggattttcttttcttgtctccttgaagtctgatgatgaagtcattgttcttcaagagaaacgtagtggcaa |
16756786 |
T |
|
| Q |
217 |
attatttatcctcaaaaatattactatgcttt |
248 |
Q |
| |
|
| ||||||| ||||| |||| ||||||||||| |
|
|
| T |
16756787 |
agtatttattctcaataatagtactatgcttt |
16756818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 238 - 456
Target Start/End: Original strand, 16756838 - 16757056
Alignment:
| Q |
238 |
tactatgcttttgggaaacgcagtcaatgtttgctgcattggtccaaaatcttctgagtccaggtatagttataatattttagcttgttctaagatgagt |
337 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| ||| ||||||||| |||||| |||| |||||||||| |||| | ||| | ||| ||| | |
|
|
| T |
16756838 |
tactatgcttttgggaaatgcagtcaatatttgttgctttggtccaactgcttctgtgtccgagtatagttatgatatatcggctaggtctcagaaatgc |
16756937 |
T |
|
| Q |
338 |
aagctggaatttcacacatttgtgaagaatgtccaacaggttactttgaaaactctttcatcaaagttccttgtgattccatttggtttttctgaacctc |
437 |
Q |
| |
|
|| ||| |||| ||| | |||| |||||| | || || |||||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
16756938 |
aaactgaaattacactcgtttgcaaagaatttgcatcaagttactttagcaactctttcatcagagttccttgtgattccaattggttcttctgaacctc |
16757037 |
T |
|
| Q |
438 |
tcgagatagaaatttgcat |
456 |
Q |
| |
|
||||| | | ||||||||| |
|
|
| T |
16757038 |
tcgagcttgtaatttgcat |
16757056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 659
Target Start/End: Original strand, 16752844 - 16752885
Alignment:
| Q |
618 |
gttaagagttcagacacgatatacagtgtgaaggagaagatt |
659 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||| ||||| |
|
|
| T |
16752844 |
gttaagagtttagacacgatattcagtgtgaaggagcagatt |
16752885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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