View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11906_low_2 (Length: 393)

Name: NF11906_low_2
Description: NF11906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11906_low_2
NF11906_low_2
[»] chr4 (27 HSPs)
chr4 (11-363)||(10432178-10432517)
chr4 (11-109)||(17335354-17335452)
chr4 (11-108)||(22171748-22171845)
chr4 (11-107)||(9536756-9536852)
chr4 (14-108)||(15166471-15166565)
chr4 (11-95)||(7583792-7583876)
chr4 (11-108)||(18750824-18750921)
chr4 (11-108)||(12616714-12616811)
chr4 (12-109)||(17711307-17711404)
chr4 (11-108)||(19556541-19556636)
chr4 (11-107)||(8968072-8968168)
chr4 (11-109)||(17218529-17218626)
chr4 (11-110)||(11252127-11252226)
chr4 (11-97)||(10106295-10106381)
chr4 (11-111)||(9849704-9849804)
chr4 (12-79)||(16928925-16928992)
chr4 (39-108)||(25025134-25025203)
chr4 (17-109)||(11782498-11782590)
chr4 (11-109)||(25096300-25096395)
chr4 (11-66)||(17108718-17108773)
chr4 (68-109)||(17277902-17277943)
chr4 (24-64)||(19603901-19603941)
chr4 (11-95)||(20828152-20828236)
chr4 (48-109)||(13588745-13588806)
chr4 (68-108)||(1832054-1832094)
chr4 (12-96)||(9263362-9263446)
chr4 (24-108)||(14573462-14573545)
[»] chr8 (36 HSPs)
chr8 (11-108)||(13313271-13313368)
chr8 (15-109)||(17100205-17100299)
chr8 (11-108)||(19704986-19705083)
chr8 (11-108)||(20400334-20400431)
chr8 (11-108)||(28621604-28621701)
chr8 (11-94)||(24090892-24090975)
chr8 (11-106)||(24583173-24583268)
chr8 (11-109)||(29765390-29765489)
chr8 (11-109)||(17510904-17511002)
chr8 (11-108)||(29380960-29381058)
chr8 (11-99)||(15176441-15176529)
chr8 (12-108)||(24389757-24389853)
chr8 (11-109)||(18446858-18446956)
chr8 (11-108)||(19265822-19265919)
chr8 (11-108)||(23867829-23867926)
chr8 (11-108)||(24380353-24380450)
chr8 (11-108)||(25481505-25481602)
chr8 (11-108)||(26139788-26139885)
chr8 (12-89)||(24520021-24520098)
chr8 (11-108)||(26888486-26888583)
chr8 (22-109)||(21316794-21316881)
chr8 (24-108)||(22501846-22501930)
chr8 (11-110)||(14271841-14271940)
chr8 (11-106)||(26829468-26829563)
chr8 (49-109)||(21695412-21695472)
chr8 (11-109)||(24381324-24381423)
chr8 (24-110)||(34499241-34499327)
chr8 (24-108)||(4007151-4007235)
chr8 (11-108)||(6886668-6886767)
chr8 (16-63)||(18829339-18829386)
chr8 (39-105)||(30117661-30117727)
chr8 (24-109)||(24908917-24909002)
chr8 (24-109)||(24911138-24911223)
chr8 (11-39)||(24388441-24388469)
chr8 (48-108)||(24518588-24518647)
chr8 (11-63)||(30832939-30832991)
[»] chr7 (32 HSPs)
chr7 (11-108)||(13280759-13280856)
chr7 (11-108)||(23173685-23173782)
chr7 (11-110)||(9078879-9078979)
chr7 (11-101)||(5236873-5236963)
chr7 (11-101)||(8977477-8977567)
chr7 (11-109)||(18986743-18986841)
chr7 (11-109)||(19001371-19001469)
chr7 (11-108)||(3585522-3585619)
chr7 (11-109)||(11804698-11804796)
chr7 (11-109)||(19201458-19201556)
chr7 (11-108)||(10611713-10611810)
chr7 (17-108)||(26249075-26249166)
chr7 (14-108)||(4450674-4450768)
chr7 (11-109)||(8052428-8052525)
chr7 (15-109)||(39270272-39270365)
chr7 (11-108)||(2565906-2566003)
chr7 (11-108)||(3173710-3173807)
chr7 (11-108)||(2927874-2927971)
chr7 (11-108)||(9767785-9767882)
chr7 (24-109)||(10332417-10332502)
chr7 (38-109)||(19201321-19201392)
chr7 (11-109)||(13287709-13287807)
chr7 (11-108)||(6046527-6046624)
chr7 (24-105)||(14195761-14195842)
chr7 (26-109)||(19154833-19154916)
chr7 (26-109)||(20754232-20754315)
chr7 (11-108)||(9978285-9978382)
chr7 (11-108)||(23897240-23897337)
chr7 (11-41)||(8317508-8317538)
chr7 (11-108)||(6018358-6018455)
chr7 (48-109)||(9722478-9722539)
chr7 (68-108)||(1810961-1811001)
[»] chr1 (38 HSPs)
chr1 (11-108)||(15542308-15542405)
chr1 (11-108)||(22507381-22507479)
chr1 (11-108)||(729136-729233)
chr1 (11-108)||(18527496-18527593)
chr1 (11-108)||(18832215-18832312)
chr1 (11-108)||(21663090-21663187)
chr1 (11-110)||(21450767-21450866)
chr1 (11-108)||(26611331-26611428)
chr1 (12-110)||(12210266-12210364)
chr1 (11-108)||(21333071-21333168)
chr1 (20-108)||(14782539-14782627)
chr1 (23-110)||(15158786-15158873)
chr1 (11-109)||(18734584-18734682)
chr1 (11-109)||(18827396-18827494)
chr1 (11-108)||(22426515-22426612)
chr1 (11-108)||(22624616-22624713)
chr1 (17-109)||(25402434-25402526)
chr1 (12-104)||(28009747-28009839)
chr1 (11-88)||(16180718-16180794)
chr1 (27-96)||(27973319-27973388)
chr1 (11-108)||(16817108-16817205)
chr1 (24-109)||(26647356-26647441)
chr1 (11-63)||(9403634-9403686)
chr1 (11-106)||(16785603-16785698)
chr1 (11-110)||(16915193-16915293)
chr1 (24-104)||(22626158-22626238)
chr1 (11-52)||(15630979-15631020)
chr1 (68-108)||(24464671-24464711)
chr1 (24-108)||(27116223-27116307)
chr1 (40-108)||(33192381-33192449)
chr1 (11-98)||(16363623-16363710)
chr1 (50-108)||(26652613-26652671)
chr1 (24-109)||(16114813-16114898)
chr1 (20-49)||(20107863-20107892)
chr1 (11-108)||(22621794-22621890)
chr1 (68-109)||(27912121-27912162)
chr1 (11-79)||(12011213-12011281)
chr1 (68-108)||(15526806-15526846)
[»] chr6 (34 HSPs)
chr6 (11-110)||(14641632-14641731)
chr6 (11-104)||(17822027-17822121)
chr6 (13-109)||(17384025-17384121)
chr6 (11-107)||(24469798-24469894)
chr6 (11-108)||(22404254-22404351)
chr6 (11-108)||(24480024-24480121)
chr6 (11-79)||(19577566-19577634)
chr6 (12-109)||(1636635-1636731)
chr6 (11-98)||(14723684-14723771)
chr6 (11-109)||(19593974-19594073)
chr6 (11-109)||(9519732-9519830)
chr6 (11-89)||(21152510-21152588)
chr6 (12-110)||(22845849-22845947)
chr6 (11-108)||(14076396-14076493)
chr6 (11-108)||(21760407-21760504)
chr6 (11-108)||(17847780-17847877)
chr6 (11-107)||(23644318-23644414)
chr6 (26-108)||(4340679-4340761)
chr6 (11-108)||(14078037-14078135)
chr6 (14-99)||(22564558-22564643)
chr6 (24-108)||(8038050-8038134)
chr6 (24-98)||(21932487-21932562)
chr6 (47-106)||(26820896-26820955)
chr6 (11-108)||(9848163-9848260)
chr6 (39-108)||(21687129-21687198)
chr6 (24-98)||(9841032-9841106)
chr6 (11-88)||(11136918-11136995)
chr6 (11-108)||(18171253-18171350)
chr6 (49-101)||(27961252-27961304)
chr6 (13-63)||(17379495-17379545)
chr6 (11-108)||(20004179-20004277)
chr6 (11-99)||(21845737-21845826)
chr6 (23-63)||(8066664-8066704)
chr6 (38-98)||(21036957-21037017)
[»] chr5 (30 HSPs)
chr5 (11-108)||(19003765-19003862)
chr5 (11-108)||(34132086-34132183)
chr5 (11-108)||(23338892-23338988)
chr5 (11-108)||(23387547-23387644)
chr5 (11-109)||(20860339-20860437)
chr5 (12-109)||(19053102-19053199)
chr5 (17-108)||(25400738-25400829)
chr5 (11-111)||(22797417-22797517)
chr5 (11-98)||(28666492-28666579)
chr5 (13-107)||(24320522-24320617)
chr5 (11-97)||(17469569-17469655)
chr5 (11-109)||(23214824-23214922)
chr5 (11-108)||(29987956-29988054)
chr5 (11-108)||(24142407-24142504)
chr5 (11-110)||(24162009-24162108)
chr5 (11-76)||(24658332-24658397)
chr5 (14-108)||(20548453-20548547)
chr5 (11-49)||(16521962-16522000)
chr5 (11-109)||(19006847-19006945)
chr5 (15-109)||(34488861-34488955)
chr5 (68-109)||(17831750-17831791)
chr5 (11-108)||(26069249-26069346)
chr5 (11-108)||(26122382-26122479)
chr5 (24-108)||(23110196-23110280)
chr5 (11-109)||(26117437-26117535)
chr5 (11-108)||(26315185-26315283)
chr5 (47-104)||(15691304-15691361)
chr5 (48-109)||(25572477-25572538)
chr5 (11-99)||(18832222-18832310)
chr5 (68-108)||(21352972-21353012)
[»] chr3 (38 HSPs)
chr3 (11-112)||(18457107-18457208)
chr3 (11-109)||(34276436-34276534)
chr3 (11-108)||(12517290-12517387)
chr3 (17-108)||(19912586-19912677)
chr3 (11-104)||(25850952-25851045)
chr3 (11-97)||(8115305-8115391)
chr3 (11-105)||(8145248-8145342)
chr3 (11-98)||(8765674-8765761)
chr3 (11-98)||(8770564-8770651)
chr3 (11-109)||(1096760-1096857)
chr3 (15-109)||(13938845-13938939)
chr3 (11-108)||(16242194-16242290)
chr3 (18-99)||(12771211-12771292)
chr3 (11-56)||(20431472-20431517)
chr3 (11-108)||(22470402-22470499)
chr3 (22-96)||(12372344-12372418)
chr3 (11-105)||(22246997-22247090)
chr3 (39-109)||(52935532-52935602)
chr3 (11-108)||(16228344-16228441)
chr3 (11-108)||(21740479-21740576)
chr3 (8-108)||(2166035-2166134)
chr3 (17-108)||(20021817-20021908)
chr3 (48-109)||(7805779-7805840)
chr3 (11-108)||(18535770-18535867)
chr3 (48-108)||(20886905-20886965)
chr3 (58-109)||(26092952-26093003)
chr3 (30-108)||(2508719-2508797)
chr3 (11-49)||(8881460-8881498)
chr3 (11-97)||(14977806-14977892)
chr3 (11-109)||(27073952-27074050)
chr3 (24-109)||(819845-819930)
chr3 (11-108)||(19909029-19909126)
chr3 (24-107)||(3429225-3429308)
chr3 (11-89)||(3114728-3114806)
chr3 (11-44)||(19170054-19170087)
chr3 (48-109)||(31283902-31283963)
chr3 (13-105)||(19170144-19170236)
chr3 (68-108)||(24516597-24516637)
[»] scaffold0056 (1 HSPs)
scaffold0056 (11-109)||(23036-23134)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-108)||(4824-4921)
[»] chr2 (24 HSPs)
chr2 (11-96)||(18758301-18758386)
chr2 (11-109)||(17350978-17351076)
chr2 (11-109)||(28918188-28918286)
chr2 (11-104)||(24086310-24086403)
chr2 (11-107)||(18120546-18120642)
chr2 (12-108)||(26313179-26313275)
chr2 (11-109)||(25196611-25196709)
chr2 (11-109)||(25886190-25886288)
chr2 (24-109)||(17891744-17891829)
chr2 (23-108)||(21905738-21905823)
chr2 (11-109)||(25532236-25532334)
chr2 (11-99)||(22569054-22569142)
chr2 (24-108)||(23010043-23010127)
chr2 (11-109)||(27907521-27907619)
chr2 (11-108)||(29144634-29144732)
chr2 (11-108)||(34574513-34574611)
chr2 (11-108)||(25537556-25537653)
chr2 (11-108)||(35680100-35680197)
chr2 (11-109)||(20379286-20379384)
chr2 (16-108)||(20853086-20853178)
chr2 (49-107)||(29892228-29892286)
chr2 (18-99)||(27540274-27540355)
chr2 (49-108)||(16157084-16157143)
chr2 (60-113)||(34369372-34369425)
[»] scaffold0555 (1 HSPs)
scaffold0555 (19-108)||(6461-6550)
[»] scaffold0258 (1 HSPs)
scaffold0258 (11-108)||(20252-20349)
[»] scaffold0032 (1 HSPs)
scaffold0032 (12-108)||(92828-92924)
[»] scaffold0043 (1 HSPs)
scaffold0043 (11-109)||(88435-88533)
[»] scaffold0024 (1 HSPs)
scaffold0024 (11-108)||(41339-41435)
[»] scaffold0019 (3 HSPs)
scaffold0019 (11-108)||(182511-182608)
scaffold0019 (48-108)||(24839-24899)
scaffold0019 (48-104)||(35215-35271)
[»] scaffold0014 (1 HSPs)
scaffold0014 (11-108)||(192122-192219)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-77)||(95624-95690)
[»] scaffold0451 (1 HSPs)
scaffold0451 (11-108)||(5730-5827)
[»] scaffold0111 (1 HSPs)
scaffold0111 (11-108)||(21440-21537)
[»] scaffold0386 (1 HSPs)
scaffold0386 (24-106)||(4874-4956)
[»] scaffold0115 (1 HSPs)
scaffold0115 (40-96)||(36143-36199)
[»] scaffold0005 (1 HSPs)
scaffold0005 (24-108)||(243831-243914)


Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 363
Target Start/End: Original strand, 10432178 - 10432517
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||| ||         || ||  ||||||||||||    
T  10432178 catagacaatagttctaatactcctcatttttgctgctgaaacctaattaaaataactgaaaaacatgcaaa---------aatat--catgtcatcacc 10432266  T
Q  111 attcacattacatataacatatcgagaagagggtgtatcaccaatactacgaggactttgtacattggatcttacaatcttctgacagtcaaagtggttt 210  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  10432267 attcacactacatataacatatggagaagagggtgtatcaccaatactacgaggactttgtacattggacctaacaatcttctgacagtcaaattggttt 10432366  T
Q  211 cgcttttcgggctggccaatttgtttcatccataggtgtcatcgttttggttaggattgaaagatgtgtataacaccacatcagtgtgatcccggttatg 310  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    |||||||    
T  10432367 cgcttttcgggctgcccaatttgtttcatccataggtgtcatcgttttggttaggattgaa--atgtgtataacaccacatcagtgtgagggaggttatg 10432464  T
Q  311 ttgcaattgttgtctgattttcttgtgtgctaatatctcatttgctagcggtt 363  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  10432465 ttgcaattgttgtctgattttcttgtgcgctaatatctcatttgctagaggtt 10432517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 17335452 - 17335354
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || ||||||| | |||||||||||| ||||||||| |||||||||||||||||||    
T  17335452 cataggcaatcgttctaatactcctcctttttgcttctaaaacttactgaaaatgactgaaaaacatgccaagaataacgtaagatgacatgtcatcac 17335354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 22171748 - 22171845
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||  ||||||||| ||||||||    
T  22171748 cataggcaatcattctaatactcctcctttttgctgctaaaacctaatgaaaatagcagaaaaacatgctaagaataatgtaagatgacctgtcatca 22171845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 9536852 - 9536756
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatc 107  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||| |||||||    
T  9536852 cataggtaattgttgtaatactcctcctttttgctgctaaaacctactgaaaataattgaaaaacatgctaagaataacataagaggacctgtcatc 9536756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 15166471 - 15166565
Alignment:
Q  14 aggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||| | |||||||||||| ||||||||  ||||||||| ||||||||    
T  15166471 aggcaatcgttctaatactcctcgtttttgctgctaaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatca 15166565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 7583792 - 7583876
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaaga 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||||| |||||    
T  7583792 cataggcaattgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaaga 7583876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 18750824 - 18750921
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| | |||||||||||||||||||||||||||| |||| ||||||||| ||||||| |||| || |||||  ||||||||||||||||||    
T  18750824 cataggcaattgctctaatactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaagatgacatgtcatca 18750921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 12616714 - 12616811
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| ||| |||||||||||| |||||||||||||||||||||| ||||||  | |||||||||||  |||||| || ||||||||||||||||||    
T  12616714 cataggaaattgttctaatactcatcctttttgctgctaaaacctactgaaaaagactgaaaaacatgttaagaattacgtaagatgacatgtcatca 12616811  T

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Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 17711307 - 17711404
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| | | |||||||||| ||||||||  |||  |||| |||||||||    
T  17711307 ataggcaatcgttctaatactcctcatttttgcagctaaaacctactgaaaatgactaaaaaacatgctaagaataatgtaatttgacctgtcatcac 17711404  T

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Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 19556636 - 19556541
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| | || ||||||||| ||||||||| ||||||||| ||||||||    
T  19556636 cataggcaatcgttctaatactcc-ccttattggtgctaaaacctattgaaaatgactg-aaaacatgctaagaataacgtaagatgacctgtcatca 19556541  T

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Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 8968168 - 8968072
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatc 107  Q
    |||||| |||||||||||  |||   |||||||||||||||||||| | ||||| | |||||||||||| ||||||||| |||||||||||||||||    
T  8968168 catagggaatcgttctaaatctctatctttttgctgctaaaacctacttaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatc 8968072  T

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Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 17218529 - 17218626
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||||||||||||||||| | ||||| || || || | | |||||||||||| ||||||||| ||||||||| | |||||||    
T  17218529 cataggcaatcgttctaatactcctcctttttgcttcgaaaacttactg-aattgactgaaaaacatgctaagaataacgtaagatgacctatcatcac 17218626  T

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Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 11252226 - 11252127
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    |||||||||||||||||||||||||  |||||  ||||||| |||| | |||  || |||||||||||| || |||||| ||||||||| ||||||||||    
T  11252226 cataggcaatcgttctaatactcctttttttttttgctaaatcctactaaaataaactgaaaaacatgctaaaaataacgtaagatgacctgtcatcacc 11252127  T

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Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 10106295 - 10106381
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatg 97  Q
    ||||| |||| ||| ||||||||||||||||||| ||||||||||| ||||||| |  ||||||||||| ||||||||  |||||||    
T  10106295 catagacaattgttgtaatactcctcctttttgcagctaaaacctactgaaaatgacagaaaaacatgctaagaataatgtaagatg 10106381  T

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Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 9849804 - 9849704
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    |||||||||| | ||||||||||||   ||||| || ||||||||| | ||||| | |||||||||| | ||||||||| ||||||||| ||||||||||    
T  9849804 cataggcaattgatctaatactcctttgttttgttggtaaaacctactaaaaatgactgaaaaacatactaagaataacgtaagatgacctgtcatcacc 9849705  T
Q  111 a 111  Q
    |    
T  9849704 a 9849704  T

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Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 16928925 - 16928992
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgc 79  Q
    |||| ||||| |||||||||||||| ||||||| ||||||||||| ||||||| | ||||||||||||    
T  16928925 atagacaatcattctaatactcctcatttttgccgctaaaacctactgaaaatgactgaaaaacatgc 16928992  T

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Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 25025134 - 25025203
Alignment:
Q  39 ttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||| ||||||||| | ||||| | |||||||||||| ||||||||| ||||||||| ||||||||    
T  25025134 ttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatca 25025203  T

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Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 11782498 - 11782590
Alignment:
Q  17 caatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||| | ||||||||||  |||||||| | ||||| | | |||||||||  ||||||||| ||||||||| | |||||||    
T  11782498 caatcgttctaatactcttactttttgctgtaaaaacctacttaaaatgactaaaaaacatgttaagaataacgtaagatgacctatcatcac 11782590  T

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Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 25096300 - 25096395
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||||||    ||||||||| |   |||| ||||||| | || ||||||||| ||||| ||| |||||||||||||||||||    
T  25096300 cataggcaatcgttctaatactcca---ttttgctgcaatttcctactgaaaattactgtaaaacatgctaagaacaacgtaagatgacatgtcatcac 25096395  T

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Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 17108718 - 17108773
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataa 66  Q
    ||||||||||  ||||||||||| |||||||||||| ||||||||| |||||||||    
T  17108718 cataggcaatttttctaatactcatcctttttgctgttaaaacctactgaaaataa 17108773  T

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Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 17277902 - 17277943
Alignment:
Q  68 tgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  17277902 tgaaaaacatgctaagaataacgtaagatgacatgtcatcac 17277943  T

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Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 19603941 - 19603901
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaat 64  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  19603941 tctaatactcctcctttttgctactaaaacctactgaaaat 19603901  T

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Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 20828236 - 20828152
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaaga 95  Q
    |||||||||| ||| ||||||||||   |||||||||||| ||||| ||||||  | ||||||| |||| ||||||||| |||||    
T  20828236 cataggcaattgttgtaatactcctttattttgctgctaatacctattgaaaaagactgaaaaagatgctaagaataacgtaaga 20828152  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 13588745 - 13588806
Alignment:
Q  48 taaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||| ||| ||||||| |||||||||||||| || |||||| ||||||||  |||||||||    
T  13588745 taaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatgatttgtcatcac 13588806  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 1832094 - 1832054
Alignment:
Q  68 tgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||  |||||||| ||||||||||||||||||    
T  1832094 tgaaaaacatgcctagaataacataagatgacatgtcatca 1832054  T

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Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 9263446 - 9263362
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagat 96  Q
    |||| |||| |||||||||||||||  || ||||| ||||||||| ||||  | | |||||||||||| || |||||| ||||||    
T  9263446 atagacaattgttctaatactcctcagttctgctgataaaacctattgaatttgactgaaaaacatgctaaaaataacgtaagat 9263362  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 14573462 - 14573545
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||  |||||||  ||||||||| | ||||| | | ||||| |||| ||||||||| |||||||| |||||||||    
T  14573462 tctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagatgatatgtcatca 14573545  T

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Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 13313368 - 13313271
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||| ||||| ||||||||||||    
T  13313368 cataggcaattgttctaatactcctcctttttgctgctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaagacgacatgtcatca 13313271  T

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Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 17100299 - 17100205
Alignment:
Q  15 ggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  17100299 ggcaatcattcaaatacttctcctttttgctgctaaaaccttatgaaaataattgaaaaacatgctaagaataacttgagatgacctgtcatcac 17100205  T

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Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 19704986 - 19705083
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||||| ||||||| | |||||||||| | ||||||||| ||||||||||||||||||    
T  19704986 cataggcaatcgttctaatactccttctttatgctgttaaaacctactgaaaatgactgaaaaacatactaagaataacgtaagatgacatgtcatca 19705083  T

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Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 20400334 - 20400431
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | ||||||| | |||||| ||||| ||||||||| ||||||||| ||||||||    
T  20400334 cataggaaatcgttctaatactcctcctttttgctgctaaaacccactgaaaatgactgaaaagcatgctaagaataacgtaagatgacctgtcatca 20400431  T

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Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 28621604 - 28621701
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||| | ||||||  |||||||||||||||||||||| |||||||||||| ||||||||| | ||||||| ||||||||    
T  28621604 cataggcaatcgttctaatactcattcttttttatgctaaaacctaatgaaaataactgaaaaacatgctaagaataacgttagatgacctgtcatca 28621701  T

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Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 24090975 - 24090892
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaag 94  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| ||||    
T  24090975 cataggcaattgttctaatactcttcctttttgctgctaaaacctaattaaaataactgaaaaacatgctaagaataacgtaag 24090892  T

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Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 24583268 - 24583173
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcat 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | ||||| | |||||||||||| ||||||||| ||| ||||| ||||||    
T  24583268 cataggcaatcgttctaatactcctcctttttgctgctaaaatctactaaaaatgactgaaaaacatgctaagaataacataaaatgacctgtcat 24583173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 29765489 - 29765390
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataa-ttgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| |  |||||||||| ||||||||| ||||||||| |||||||||    
T  29765489 cataggcaatcgttctaatacacttcctttttgctgctaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgtcatcac 29765390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 17510904 - 17511002
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||| | | |||||||||||| ||||||||  ||||||||| | |||||||    
T  17510904 cataggcaatcgttctaatactcctcctttttgcagctaaaacctactgaaagtgactgaaaaacatgctaagaataatgtaagatgacctatcatcac 17511002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 29381058 - 29380960
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaat-aattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||| | |||  |||||||||| ||||||||| ||||||||| ||||||||    
T  29381058 cataggcaatcgttctaatactcctcctttttgctactaaaacctattgaaattgaataaaaaaacatgctaagaataacgtaagatgacctgtcatca 29380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 15176529 - 15176441
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgac 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||| |||||| ||||||||  |||||||||    
T  15176529 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaacacatgctaagaataatgtaagatgac 15176441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 24389757 - 24389853
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||| ||||||||| | |||||| | | ||||||||| ||||||||| ||||||||    
T  24389757 ataggcaattgttctaatactcctcatttttgttgctaaaacctactgaaaataactaaaaaacttactaagaataacgtaagatgacctgtcatca 24389853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 18446956 - 18446858
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||| ||| |||||||||||||||||||||||||||||| |||| || |||||| |||||||||||  || |||||| ||||||||| | |||||||    
T  18446956 cataggaaatggttctaatactcctcctttttgctgctaaatcctactggaaataactgaaaaacatggtaaaaataacgtaagatgacctatcatcac 18446858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 19265822 - 19265919
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| |||||||||||||||||||||| || |||| |||| | |||  || |||||||||||| ||||||||| ||||||||| ||||||||    
T  19265822 cataggcaattgttctaatactcctcctttttgttgttaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 19265919  T

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Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 23867926 - 23867829
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| | |||||   |||||||||| | |||||| || ||||||||| ||||||||    
T  23867926 cataggcaatcgttctaatactcctcgtctttgctgctaaaacctactaaaaatgcctgaaaaacatactaagaattacgtaagatgacctgtcatca 23867829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 24380450 - 24380353
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| |||||||||||||||  || ||||| ||||||||| ||||| | | |||||||||||| ||||||||| ||||||||||||| ||||    
T  24380450 cataggcaattgttctaatactcctctgttctgctggtaaaacctactgaaattgagtgaaaaacatgctaagaataacgtaagatgacatgttatca 24380353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 25481602 - 25481505
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||||||| |||||||||||   |||| | ||| |||||| ||| ||||| ||||||||| ||||||||| ||||||||    
T  25481602 cataggcaatcgttctaatactcctccattttgctgctatttcctactaaaattaattgtaaagcatgctaagaataacgtaagatgacctgtcatca 25481505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 26139788 - 26139885
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||||||||||||| |||||   |||| | |||  ||||||||||||||| ||||||||| ||||||||| | ||||||    
T  26139788 cataggcaatcgttctaatactcctcctttttgatgctatttcctactaaaataaattgaaaaacatgctaagaataacgtaagatgacctttcatca 26139885  T

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Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 24520098 - 24520021
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataac 89  Q
    ||||||||| |||||||||||  ||||||||||| ||||| |||| ||||||||| |||||||||||| |||||||||    
T  24520098 ataggcaattgttctaatacttatcctttttgctactaaatcctactgaaaataactgaaaaacatgctaagaataac 24520021  T

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Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 26888486 - 26888583
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||| | ||||||| ||||||| |||| || |||||| ||| ||||  ||||||||    
T  26888486 catagacaatcgttccaatactcctcctttttgttgctaaaacctactaaaaataaatgaaaaatatgctaaaaataacgtaaaatgatctgtcatca 26888583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 21316794 - 21316881
Alignment:
Q  22 gttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||| || |||||||||| | | ||| | |||| ||||||||||||||| ||||||||| ||||||||| |||||||||    
T  21316794 gttctaatactccgccattttgctgcttagaactactaaaaagaattgaaaaacatgctaagaataacgtaagatgacctgtcatcac 21316881  T

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Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 22501846 - 22501930
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||  |||||||| ||||||| | ||||||  |||||||||||||  ||||||||| |||||||| |||||||||    
T  22501846 tctaatactcctctgttttgctggtaaaaccaactgaaaaagattgaaaaacatgataagaataacgtaagatgatatgtcatca 22501930  T

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Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 14271841 - 14271940
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    ||||||||||   ||||||||||||   |||||||  ||||||||| ||||||   ||||||||||||| ||||||||| ||||||||| ||||||||||    
T  14271841 cataggcaattactctaatactcctttgttttgctagtaaaacctactgaaaaaggttgaaaaacatgctaagaataacgtaagatgacctgtcatcacc 14271940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 26829563 - 26829468
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcat 106  Q
    ||||||||||||||||| ||||||||| ||||| |||||   |||| | ||||  | |||||||||||| ||||||||| ||||||||| ||||||    
T  26829563 cataggcaatcgttctattactcctccattttgttgctatttcctactaaaaaatactgaaaaacatgctaagaataacgtaagatgacgtgtcat 26829468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 21695472 - 21695412
Alignment:
Q  49 aaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||| ||||| | | |||||||||||| ||||||||| |||||||||||||||||||    
T  21695472 aaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcatcac 21695412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 24381423 - 24381324
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaa-catgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||| |||  ||||||||||  || ||||| ||||||||  ||||| | | ||||||| ||||| ||||||||||||||||||| |||||||||    
T  24381423 cataggcaattgttaaaatactcctctgttctgctggtaaaacctgctgaaattgactgaaaaaacatgctaagaataacttaagatgacctgtcatcac 24381324  T

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Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 34499241 - 34499327
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    |||||||||| |||||||||||| ||||| ||||| ||||| | ||||| |||||| || |||||| |||| || ||| ||||||||    
T  34499241 tctaatactcatcctttttgctggtaaaatctaataaaaatgactgaaagacatgctaaaaataacgtaaggtggcatatcatcacc 34499327  T

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Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 4007235 - 4007151
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||  |||||||| | ||||||| | ||||| | |||||||||||| || | |||| ||||||||| ||||||||    
T  4007235 tctaatactcctctattttgctggtgaaacctactaaaaatgactgaaaaacatgctaatattaacataagatgacctgtcatca 4007151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 6886668 - 6886767
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataatt--gaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||   |||||||||||||  ||||| || ||||||||| | |||| || |  ||||||||||| ||||||||| ||||||||| ||||||||    
T  6886668 cataggcaattactctaatactcctctattttgatggtaaaacctactaaaaaaaagtctgaaaaacatgctaagaataacgtaagatgacttgtcatca 6886767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 18829339 - 18829386
Alignment:
Q  16 gcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaa 63  Q
    ||||| ||||||||| || |||||||||||||||||||||| ||||||    
T  18829339 gcaatagttctaatattcttcctttttgctgctaaaacctattgaaaa 18829386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 30117727 - 30117661
Alignment:
Q  39 ttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtca 105  Q
    |||||||| ||||||||| ||||||| | |||||||||||| || |||||| |||||| || |||||    
T  30117727 ttttgctggtaaaacctactgaaaatgaatgaaaaacatgctaaaaataacgtaagataacctgtca 30117661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 24908917 - 24909002
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||| |||||| || ||||  ||||||||| ||||| | |||||||||||||| || |||||| |||  |||| |||||||||    
T  24908917 tctaatattcctccattctgcttgtaaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcatcac 24909002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 24911138 - 24911223
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||| |||||| || ||||  ||||||||| ||||| | |||||||||||||| || |||||| |||  |||| |||||||||    
T  24911138 tctaatattcctccattctgcttgtaaaacctattgaaattgattgaaaaacatgctaaaaataacgtaatttgacctgtcatcac 24911223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 39
Target Start/End: Complemental strand, 24388469 - 24388441
Alignment:
Q  11 cataggcaatcgttctaatactcctcctt 39  Q
    |||||||||||||||||||||||||||||    
T  24388469 cataggcaatcgttctaatactcctcctt 24388441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 24518647 - 24518588
Alignment:
Q  48 taaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||| ||||||||| | |||||||| | ||||||||| | ||||||||||||||||    
T  24518647 taaaacctactgaaaataact-aaaaacatactaagaataacgttagatgacatgtcatca 24518588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 30832939 - 30832991
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaa 63  Q
    ||||| |||| | |||||||||||| ||||||||| |||||||| ||||||||    
T  30832939 catagacaattgctctaatactccttctttttgcttctaaaaccaaatgaaaa 30832991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 13280759 - 13280856
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  13280759 cataggcaatcattctaatactcgttctttttgctgctaaaacctactgaaattaattgaaaaacatgctaagaataacgtaagatgacatgtcatca 13280856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 23173782 - 23173685
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||||| | ||||||| |||||||||||| ||||||||| ||||||||||||||||||    
T  23173782 catagacaattgttctaatactcctcctttttgcagctaaaacctattaaaaataactgaaaaacatgctaagaataacgtaagatgacatgtcatca 23173685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 9078979 - 9078879
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattg-aaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||| || |||||||||| ||||||||| |||||||||||||||||||    
T  9078979 catagacaatcgttccaatactcctcctttttgctgctgaaacctactgaaaataactgaaaaaacatgctaagaataacgtaagatgacatgtcatcac 9078880  T
Q  110 c 110  Q
    |    
T  9078879 c 9078879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 5236963 - 5236873
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacat 101  Q
    |||||| ||| |||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||    
T  5236963 cataggaaattgttctaatcctcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagatgacat 5236873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 8977567 - 8977477
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacat 101  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| ||||||||| |||||||||||    
T  8977567 cataggcagttgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaagatgacat 8977477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 18986841 - 18986743
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| ||||| | | |||||||||||| ||||||||| |||||||| ||||||||||    
T  18986841 cataggcagtcgttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatgatatgtcatcac 18986743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 19001469 - 19001371
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| ||||| | | |||||||||||| ||||||||| |||||||| ||||||||||    
T  19001469 cataggcagtcgttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagatgatatgtcatcac 19001371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 3585619 - 3585522
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||| || |||||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||||  ||||||||| ||||||||    
T  3585619 cataggcaatcattttaatactcctccattttgctgctaaaacctactgaaaatgattgaaaaacatgctaagaataatgtaagatgacttgtcatca 3585522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 11804698 - 11804796
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | |||||||||||  | ||||||| ||||||||  |||||||||    
T  11804698 cataggcaatcgttctaatactgctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgttatgaataacgtaagatgatctgtcatcac 11804796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 19201458 - 19201556
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||| |||||||||  ||||||||||  ||||||||| ||||||||| |||||||||    
T  19201458 cataggcaatcgttctaatagtccacctttttgctgctaaatcctactgaaaataacagaaaaacatgttaagaataacataagatgacctgtcatcac 19201556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 10611713 - 10611810
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| | ||||| | ||| |||||||| |||||||||  ||||||| |||||||||    
T  10611713 cataggcaatcgttctaatactcatcctttttgctgctaaaacctatttaaaatcactgagaaacatgctaagaataacgcaagatgatatgtcatca 10611810  T

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Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 26249166 - 26249075
Alignment:
Q  17 caatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||||| | |||||||||||| | ||||||| ||||||||| ||||||||    
T  26249166 caattgttctaatactcatcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctatgaataacgtaagatgacctgtcatca 26249075  T

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Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 4450674 - 4450768
Alignment:
Q  14 aggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||||| ||||| |||||||||||| ||||||| | || ||||||||| ||||||||| ||||||||  ||||||||    
T  4450674 aggcaatcgttctaatactcctccattttgttgctaaaacctactgaaaatgactggaaaacatgctaagaataacgtaagatgatctgtcatca 4450768  T

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Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 8052525 - 8052428
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||| | || ||||||||| ||||||||| ||||||||  |||||||||    
T  8052525 cataggcaatcattctaatactcctcatttttgctgctaaaacctactgaaaatgactg-aaaacatgctaagaataacgtaagatgatttgtcatcac 8052428  T

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Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 39270365 - 39270272
Alignment:
Q  15 ggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||||||||||||||||| |||||||||| || | ||||| | |||||||||||| ||| ||||| |||||||||||||||||||    
T  39270365 ggcaatcgttctaatactcctcctttttactgctaaaacttactaaaaatgactgaaaaacatgctaag-ataacgtaagatgacatgtcatcac 39270272  T

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Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 2565906 - 2566003
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| |||||||| |||||||||||||||||  ||| |||||||| ||||||| | |||||||||||| ||||||| | ||||||||| ||||||||    
T  2565906 catagacaatcgttataatactcctcctttttcttgccaaaacctactgaaaatgactgaaaaacatgctaagaatatcgtaagatgacttgtcatca 2566003  T

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Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 3173710 - 3173807
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||| |||||||||||||||  ||| ||||| ||||||||||||||| | |||||||||||| |||||||||  |||||||  ||||||||    
T  3173710 cataggcaatctttctaatactcctcccatttactgctgaaacctaatgaaaatgactgaaaaacatgctaagaataacgcaagatgatctgtcatca 3173807  T

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Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 2927874 - 2927971
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| |||| |||||||||||||| |||||||| ||||| |||| | |||  || |||||||||||| ||||||||| ||||||||| ||||||||    
T  2927874 cataggtaatctttctaatactcctcatttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 2927971  T

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Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 9767785 - 9767882
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| | |||||||||||||  |||| ||| ||||||||| |||||||   |||||||||||| ||||||||| | ||||||| ||||||||    
T  9767785 cataggcaattgatctaatactcctctatttttctggtaaaacctactgaaaatggctgaaaaacatgctaagaataacgtgagatgacctgtcatca 9767882  T

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Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 10332417 - 10332502
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||| ||| | ||  |||||| || ||||||| | |||||||||||| ||||||||| |||||||||||||||||||    
T  10332417 tctaatactcctcttttctacttgtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatcac 10332502  T

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Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 19201392 - 19201321
Alignment:
Q  38 tttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||| |||||| ||||| | |||||||||||| ||||||||| ||||||||  |||||||||    
T  19201392 tttttgctgctaaagcctaataaaaattactgaaaaacatgctaagaataacgtaagatgatctgtcatcac 19201321  T

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Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 13287807 - 13287709
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||||| ||||||||| || ||   |||| | |||  || |||||||||||  ||||||||| ||||||||| |||||||||    
T  13287807 cataggcaatcgttctaatactcatcctttttgatgttatttcctactaaaataaactgaaaaacatgttaagaataacgtaagatgacttgtcatcac 13287709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 6046527 - 6046624
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||  ||| ||||||||||||||| ||||||| ||| || ||||||| | | |||||||||  ||||||||| ||||||||| | ||||||    
T  6046527 cataggcaataattcaaatactcctccttttagctgctacaacttactgaaaatgactaaaaaacatgttaagaataacataagatgacttatcatca 6046624  T

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Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 14195761 - 14195842
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtca 105  Q
    |||||||||||||  |||||||| ||||||||| | ||||| | |||||||||||| ||||||||| |||||| || |||||    
T  14195761 tctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacataagatcacctgtca 14195842  T

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Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 19154833 - 19154916
Alignment:
Q  26 taatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||| |||||  |||||||| | ||||||| |||||| |  |||||||||||| ||||||||| ||||||||| |||||||||    
T  19154833 taatagtcctctattttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcatcac 19154916  T

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Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 20754232 - 20754315
Alignment:
Q  26 taatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||| |||||  |||||||| | ||||||| |||||| |  |||||||||||| ||||||||| ||||||||| |||||||||    
T  20754232 taatagtcctctattttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgtcatcac 20754315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 9978285 - 9978382
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||| ||||||||||||||||| |||||||||||   |||| | |||  || ||||||| || | ||||||||| ||||||||  ||||||||    
T  9978285 cataggcaaccgttctaatactcctccattttgctgctatttcctactaaaataaactgaaaaatattctaagaataacataagatgatctgtcatca 9978382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 23897240 - 23897337
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| | | |||||||||||  |||||||| |||||| || | ||| | | |||||||||||  ||||||||  ||||||||||||||||||    
T  23897240 cataggcaattgatataatactcctctgttttgctggtaaaacatactaaaattgactgaaaaacatgttaagaataatgtaagatgacatgtcatca 23897337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 41
Target Start/End: Complemental strand, 8317538 - 8317508
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttt 41  Q
    |||||||||||||||||||||||||||||||    
T  8317538 cataggcaatcgttctaatactcctcctttt 8317508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 6018358 - 6018455
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||   |||||||||||||  ||||| || ||||||||| | |||   | |||||||||||| || |||||| ||||||||||| ||||||    
T  6018358 cataggcaattaatctaatactcctctgttttgttggtaaaacctactaaaatcgactgaaaaacatgctaaaaataacataagatgacatatcatca 6018455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 9722478 - 9722539
Alignment:
Q  48 taaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||| ||| ||||||| |||||||||||||| || |||||| ||||||||  |||||||||    
T  9722478 taaaatctactgaaaatgattgaaaaacatgctaataataacgtaagatgatttgtcatcac 9722539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 1810961 - 1811001
Alignment:
Q  68 tgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||| | ||||||| ||||||||||||||||||    
T  1810961 tgaaaaacatgctacgaataacgtaagatgacatgtcatca 1811001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 15542405 - 15542308
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||  ||||||||| ||||||||||||||||||    
T  15542405 cataggcaatcgttctaatactcctactttttgctgctaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatca 15542308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 22507479 - 22507381
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataa-ttgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||||| ||||||||| |||||| |||||||||||    
T  22507479 cataggcaatcgttctaatactcctcctttttgccgctaaaacctaatgaaaataactaaaaaaacatgctaagaataacgtaagatcacatgtcatca 22507381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 729136 - 729233
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| | |||||| ||||| ||||||||| ||||||||| | ||||||    
T  729136 catagacaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaagcatgctaagaataacgtaagatgacctttcatca 729233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 18527593 - 18527496
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| | ||||||| |||| ||||||||| ||||||||| ||||||||    
T  18527593 cataggcaatcattctaatactcctcctttttgccgctaaaacctattgaaaatgagtgaaaaagatgctaagaataacgtaagatgacttgtcatca 18527496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 18832215 - 18832312
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||| ||||| ||| ||||||||| ||||||||    
T  18832215 cataggtaatcgttctaatactcctcctttttgctgctaagacctaattaaagtaactgaaaaacatgctaagaagaacctaagatgacctgtcatca 18832312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 21663187 - 21663090
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||| |||||||||| || ||||||||| ||||||| | |||||||||||| ||||||||| ||||||||| ||||||||    
T  21663187 cataggcaatcgttctaatacttctcctttttgatgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagatgacctgtcatca 21663090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 21450767 - 21450866
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| | ||| |||||||| ||  ||||||||||||||| ||||||||||    
T  21450767 cataggcaatctttccaatactcctcctttttgctgctaaaacctactgaaaatgactgagaaacatgctaaagataacttaagatgacctgtcatcacc 21450866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 26611428 - 26611331
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||| | | | |||||||||||||||| ||||||||| ||||||||| ||||||||    
T  26611428 cataggcaatcattccaatactcctcctttttgctgctaaatcctactaatattaattgaaaaacatgctaagaataacgtaagatgacctgtcatca 26611331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 12210266 - 12210364
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||| | | |||||||||||| ||||||||  ||||||||| | ||||||||    
T  12210266 atagacaatctttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaaaacatgctaagaataatgtaagatgacctatcatcacc 12210364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 21333168 - 21333071
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||| ||||| ||| || |||||||   ||||||||| ||||||||||||||||||    
T  21333168 cataggcaatcgttttaatacttctcctttttcctgctaaaacctattgaaactaagtgcaaaacatattaagaataacataagatgacatgtcatca 21333071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 14782539 - 14782627
Alignment:
Q  20 tcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| |||||| ||||||||||||||||||||||||| ||||| | | |||||||||||| ||||||||| ||||||||| ||||||||    
T  14782539 tcgtcctaatagtcctcctttttgctgctaaaacctattgaaattgagtgaaaaacatgctaagaataacgtaagatgacctgtcatca 14782627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 15158873 - 15158786
Alignment:
Q  23 ttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    ||||||||||||||||||||||||||||| |||| | ||||||| |||||||||||| ||||||||| |||  |||| ||||||||||    
T  15158873 ttctaatactcctcctttttgctgctaaatcctacttaaaataactgaaaaacatgctaagaataacgtaatttgacctgtcatcacc 15158786  T

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Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 18734682 - 18734584
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| | ||   || |||||||||||| ||||||||| |||||| || |||||||||    
T  18734682 cataggcaatcgttctaatactcctcctttttgctgttaaatcctactaaagtaaactgaaaaacatgctaagaataacgtaagataacctgtcatcac 18734584  T

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Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 18827396 - 18827494
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||| ||||||||||| |||||| | ||||||| ||||||| ||||||| |||||||||||  ||||||||| |||||||||  ||||||||    
T  18827396 cataggcaatcattctaatactcatcctttctcctgctaagacctaattaaaataactgaaaaacatgttaagaataacgtaagatgaccagtcatcac 18827494  T

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Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 22426612 - 22426515
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||||||||||||||||||||   |||| | |||  || |||||||||||| |||||| || ||||||||| ||||||||    
T  22426612 cataggcaatcgttctaatactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaatgacgtaagatgacctgtcatca 22426515  T

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Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 22624616 - 22624713
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||| || |||||||||||||||||||||||||| |||| | |||  || | |||||||||| ||||||||  ||||||||||||||||||    
T  22624616 cataggcaatcattttaatactcctcctttttgctgctaaatcctactaaaataaacttaaaaacatgctaagaataatgtaagatgacatgtcatca 22624713  T

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Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 25402526 - 25402434
Alignment:
Q  17 caatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||||||||| |||||||||||||| |||| | |||  || |||||||||||| |||||||||  |||||||| |||||||||    
T  25402526 caatcgttctaatactcctcttttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgcaagatgacctgtcatcac 25402434  T

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Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 28009747 - 28009839
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtc 104  Q
    ||||||||| | |||||| ||||||||||||||||||||||| ||  |||||| | |||||||||||| ||||||||  ||||||||||||||    
T  28009747 ataggcaattgctctaatgctcctcctttttgctgctaaaacttagcgaaaatgactgaaaaacatgctaagaataatgtaagatgacatgtc 28009839  T

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Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 16180718 - 16180794
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataa 88  Q
    |||||||||| |||||||||||||||||||||| |||||||  ||| ||||||||| |||||||||||| ||||||||    
T  16180718 cataggcaat-gttctaatactcctcctttttgttgctaaactctactgaaaataactgaaaaacatgctaagaataa 16180794  T

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Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 27973319 - 27973388
Alignment:
Q  27 aatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagat 96  Q
    |||||||||||||||||||| ||||||||| ||||||| | |||||||||||| ||||||||| ||||||    
T  27973319 aatactcctcctttttgctgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagat 27973388  T

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Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 16817205 - 16817108
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| ||||||| ||||||||||||||||||||   |||| | |||  || |||||||||||  ||||||||| ||||||||| ||||||||    
T  16817205 cataggcaatagttctaacactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgttaagaataacgtaagatgacttgtcatca 16817108  T

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Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 26647441 - 26647356
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||| ||||| || ||||||||| ||||||  | ||||||| |||| ||||||||| ||||||||| |||||||||    
T  26647441 tctaatactcctccgttttgttggtaaaacctactgaaaaagactgaaaaatatgctaagaataacgtaagatgacctgtcatcac 26647356  T

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Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 9403634 - 9403686
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaa 63  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  9403634 cataggcaaacgttctaatactccttctttttgctgctaaaacctactgaaaa 9403686  T

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Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 16785698 - 16785603
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcat 106  Q
    |||||||||| |||||||||||||||| |||| ||| ||||||| | ||||||| ||| || ||||||| || |||| | ||||||| ||||||||    
T  16785698 cataggcaattgttctaatactcctccgttttactggtaaaacccattgaaaattatttaagaacatgctaaaaatagcgtaagatgtcatgtcat 16785603  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 16915293 - 16915193
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaata-attgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||||||||||||||| || ||   |||| | |||| | | | |||||||||  ||||||||| ||||||||| |||||||||    
T  16915293 cataggcaatcgttctaatactcctcctttttgttgttattccctactaaaaaaatactaaaaaacatgttaagaataacgtaagatgacgtgtcatcac 16915194  T
Q  110 c 110  Q
    |    
T  16915193 c 16915193  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 22626238 - 22626158
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtc 104  Q
    |||||||||||||  |||||||| ||||| ||| | |||| |||| |||||||||| ||||||||| ||||||||| ||||    
T  22626238 tctaatactcctctgttttgctggtaaaagctactaaaaaaaattcaaaaacatgctaagaataacgtaagatgacctgtc 22626158  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 15631020 - 15630979
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaa 52  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  15631020 cataggcaatcgttctaatactcctcctttttgtagctaaaa 15630979  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 24464671 - 24464711
Alignment:
Q  68 tgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  24464671 tgaaaaacatgctaagaataacgtaagatgacatgtcatca 24464711  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 27116307 - 27116223
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| ||| ||||  || ||||||||| | ||||| |||||||||||||  ||||| ||| ||||||||||| ||||||    
T  27116307 tctaatactcatccgtttttatggtaaaacctactaaaaatgattgaaaaacatgttaagaaaaacgtaagatgacatttcatca 27116223  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 33192381 - 33192449
Alignment:
Q  40 tttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||| ||||||||| ||||| | | |||||||||||| ||||||| | ||||||||| ||||||||    
T  33192381 tttgctggtaaaacctactgaaattgactgaaaaacatgctaagaatagcgtaagatgacttgtcatca 33192449  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 16363623 - 16363710
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatga 98  Q
    |||||||||| | |||||||||||||  ||||| || ||||| ||| ||||||| | || ||||||||| || |||||| ||||||||    
T  16363623 cataggcaattgatctaatactcctctattttgttggtaaaaactactgaaaatgactggaaaacatgctaaaaataacgtaagatga 16363710  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 26652613 - 26652671
Alignment:
Q  50 aaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||| | ||||||| |||||||||||| || |||||| || |||||||||||||||    
T  26652613 aaacctactaaaaataactgaaaaacatgctaaaaataacgtaggatgacatgtcatca 26652671  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 16114813 - 16114898
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||| ||  || ||||| |||||| |  ||||||| |||||||||||||| ||||||||| |||||| |  |||||||||    
T  16114813 tctaatactcatctgttatgctggtaaaacatgctgaaaatgattgaaaaacatgctaagaataacgtaagataatctgtcatcac 16114898  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 20107863 - 20107892
Alignment:
Q  20 tcgttctaatactcctcctttttgctgcta 49  Q
    ||||||||||||||||||||||||||||||    
T  20107863 tcgttctaatactcctcctttttgctgcta 20107892  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 22621794 - 22621890
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| | |||||| |||||| | ||||||| |||| |||| | ||||| | |||||||||||| |||||| || |||||| || ||||||||    
T  22621794 cataggcaattgatctaattctcctcttctttgctggtaaa-cctactaaaaatgactgaaaaacatgctaagaattacgtaagataacctgtcatca 22621890  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 27912121 - 27912162
Alignment:
Q  68 tgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||  ||||||||| |||||||||||||||||||    
T  27912121 tgaaaaacatgttaagaataacgtaagatgacatgtcatcac 27912162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 12011281 - 12011213
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgc 79  Q
    |||||||||| | |||||||||| | | |||||||| ||||||||| |||||||   ||||||||||||    
T  12011281 cataggcaattgctctaatactcattcgttttgctggtaaaacctactgaaaatgtgtgaaaaacatgc 12011213  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 15526846 - 15526806
Alignment:
Q  68 tgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||  ||||||||| ||||||||||||||||||    
T  15526846 tgaaaaacatgataagaataacgtaagatgacatgtcatca 15526806  T

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Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 14641632 - 14641731
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| |||||| || ||||||||||    
T  14641632 cataggtaattgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaagataacctgtcatcacc 14641731  T

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Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 17822121 - 17822027
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataa-ttgaaaaacatgcgaagaataacttaagatgacatgtc 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||||| ||||||||| ||||||||||||||    
T  17822121 cataggcaatcgttctaatactcctcctttttgctgctaaatcctattgaaaataactagaaaaacatgctaagaataacgtaagatgacatgtc 17822027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 17384025 - 17384121
Alignment:
Q  13 taggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||  |||||||||    
T  17384025 taggcaatcattgtaatactcctcctttttgctgctaaaacctaatgaaaataactgaaaaacatgctaagaataatgtaagatgatctgtcatcac 17384121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 24469798 - 24469894
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatc 107  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| ||||||| |||||||||||| | || |||||| ||||||||| |||||||    
T  24469798 cataggcaatcgttctaatactcctcctttttgctgtcaaaacctactgaaaatgattgaaaaacatactaaaaataacgtaagatgacctgtcatc 24469894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 22404351 - 22404254
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| ||||| | | |||||||||||  |||||||||  |||||||||||||||||    
T  22404351 catagacaatcgttttaatactcctcctttttgctgctaaaacctactgaaatttactgaaaaacatgataagaataacgaaagatgacatgtcatca 22404254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 24480024 - 24480121
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||| |||||| ||||||||| ||||||||| | ||||||    
T  24480024 catagacaatcgttccaatactcctcctttttgctgccaaaacctactgaaaatgattgaaatacatgctaagaataacgtaagatgacctatcatca 24480121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 19577634 - 19577566
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgc 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  19577634 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaataactaaaaaacatgc 19577566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 1636635 - 1636731
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||| | ||||||| |||||||||||| ||||||||| ||||||||  |||||||||    
T  1636635 ataggcaattgttctaatactc-tcctttttgccgctaaaacctactaaaaataactgaaaaacatgctaagaataacgtaagatgatctgtcatcac 1636731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 14723684 - 14723771
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatga 98  Q
    ||||| ||||| ||||||||||||||||||||||| ||||| |||| ||||||||| |||||| ||||| ||||||||| ||||||||    
T  14723684 catagacaatcattctaatactcctcctttttgctcctaaatcctattgaaaataactgaaaagcatgctaagaataacgtaagatga 14723771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 19594073 - 19593974
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataa-ttgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |  |||||||||| |||| |||| ||||| ||| |||||||||    
T  19594073 cataggcaattgttctaatactcctcctttttgcagctaaaacctactgaaaataactaaaaaaacatgctaagattaacataagacgacttgtcatcac 19593974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 9519732 - 9519830
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||| | ||||||||||||||||||||||||||||  ||| ||||||||| | |||||||||| || |||||| ||||||||  |||||||||    
T  9519732 cataggcaattgctctaatactcctcctttttgctgctaaatactactgaaaataactaaaaaacatgctaaaaataacgtaagatgaattgtcatcac 9519830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 21152588 - 21152510
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataac 89  Q
    ||||| |||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||| || ||||||    
T  21152588 catagacaatcgttctaatactcctcctttttgctgcttaatcctactaaaaataattgaaaaacatgctaaaaataac 21152510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 22845947 - 22845849
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    ||||||||| |||||||||||||||||||||| || |||||| || ||||||||| |||||||||||| |||| |||| |||||||   ||||||||||    
T  22845947 ataggcaattgttctaatactcctcctttttgttgttaaaacatactgaaaataactgaaaaacatgctaagagtaacgtaagatggtctgtcatcacc 22845849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 14076396 - 14076493
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||   ||||||||||||||| |||||||||||| | || ||||||||| |||||| ||||| ||||||||| ||||||||| ||||||||    
T  14076396 cataggcaatttctctaatactcctcctctttgctgctaaatcatactgaaaataactgaaaaccatgctaagaataacgtaagatgacctgtcatca 14076493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 21760504 - 21760407
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| |||| |||||||| ||||||||||||||||||||  ||| ||||||| | ||||||| |||| |||||||||||||| |||| ||||||||    
T  21760504 cataggaaatcattctaataatcctcctttttgctgctaaattctattgaaaatgactgaaaaatatgctaagaataacttaaggtgacctgtcatca 21760407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 17847780 - 17847877
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| ||||||||||||||||| || |||||||||||||||| || | ||||||| | |||||||||| ||||||||| ||||| ||  ||||||||    
T  17847780 catagacaatcgttctaatactcttcatttttgctgctaaaacttacttaaaataactaaaaaacatgctaagaataacataagaggatctgtcatca 17847877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 23644414 - 23644318
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatc 107  Q
    |||||||||| | ||||||||||||   |||||||| ||||||||| | |||| ||||||||||||||| ||||||||| |||||| || |||||||    
T  23644414 cataggcaattgatctaatactcctatgttttgctggtaaaacctactaaaaacaattgaaaaacatgctaagaataacgtaagataacctgtcatc 23644318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 4340679 - 4340761
Alignment:
Q  26 taatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||| ||||||||||||| ||||||||  |||||||||| | || |||||| ||||||||  ||||||||    
T  4340679 taatactcctcctttttactgctaaaacctactgaaaatatctgaaaaacatactaaaaataacgtaagatgatctgtcatca 4340761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 14078037 - 14078135
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatg-aaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| | ||||||||||||||| |||||||||||| |||| || ||||||| | |||| ||||| ||||||||  ||||||||| ||||||||    
T  14078037 cataggcaattgctctaatactcctcctctttgctgctaaatcctactgaaaaataactaaaaaccatgctaagaataatgtaagatgacctgtcatca 14078135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 22564643 - 22564558
Alignment:
Q  14 aggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgac 99  Q
    ||||||| | |||||||||||||  |||||||| ||||||||| | ||||| | |||||||||||| ||||||||| |||||||||    
T  22564643 aggcaattgctctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaagatgac 22564558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 8038134 - 8038050
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||| |||||| || ||| || ||||||  ||||||||||| || ||||||||| ||||||||| ||||||||    
T  8038134 tctaatactcctccttattgctggtataacttagtgaaaaagattgaaaaacaggctaagaataacgtaagatgacctgtcatca 8038050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 21932487 - 21932562
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaaccta-atgaaaataattgaaaaacatgcgaagaataacttaagatga 98  Q
    ||||||||||||||||||||||  ||||||| | ||||||||  || |||||||||| ||||||||||||||||||    
T  21932487 tctaatactcctcctttttgctattaaaacccacatgaaaatgtttaaaaaacatgctaagaataacttaagatga 21932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 26820896 - 26820955
Alignment:
Q  47 ctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcat 106  Q
    |||||||||||||||||||| |||||||||||| |||| |||| ||||||||| ||||||    
T  26820896 ctaaaacctaatgaaaataactgaaaaacatgctaagagtaacgtaagatgacctgtcat 26820955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 9848163 - 9848260
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| ||| | |||||||||| |||||||||||  ||||||||| | ||||| | |||||||||||  ||||||||| | | ||||||||||||||    
T  9848163 cataggaaattgctctaatactcatcctttttgctaataaaacctactaaaaatgactgaaaaacatgttaagaataacgtcaaatgacatgtcatca 9848260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 21687198 - 21687129
Alignment:
Q  39 ttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||| ||||||||| | ||| | | |||||||||||| ||||||||| ||||||||||||||||||    
T  21687198 ttttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 21687129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 9841032 - 9841106
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatga 98  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| | | ||| |||||  ||||||||| ||||||||    
T  9841032 tctaatactcctcctttctgctggtaaaacctactgaaaatgactaaaacacatgttaagaataacgtaagatga 9841106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 11136918 - 11136995
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataa 88  Q
    |||| |||||| |||||||| |||||||||||||| ||||| |||| | |||  || |||||||||||| ||||||||    
T  11136918 catatgcaatcattctaataatcctcctttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataa 11136995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 18171350 - 18171253
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||| ||||||||||||||||||||| |||||   |||| | ||   || |||||||||||| ||||||||   |||||||| ||||||||    
T  18171350 cataggcaatcattctaatactcctcctttttggtgctatttcctattaaagtaaactgaaaaacatgctaagaataatgcaagatgacctgtcatca 18171253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 27961252 - 27961304
Alignment:
Q  49 aaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacat 101  Q
    |||||||| ||||||| |||||||||||||  ||||||||| |||||||||||    
T  27961252 aaaacctactgaaaatgattgaaaaacatgttaagaataacgtaagatgacat 27961304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 17379545 - 17379495
Alignment:
Q  13 taggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaa 63  Q
    |||| |||||||||||||||| |||||||||||  ||||||||| ||||||    
T  17379545 tagggaatcgttctaatactcatcctttttgcttataaaacctactgaaaa 17379495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 20004277 - 20004179
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaa-catgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||| |||| ||||||| |||||||| ||||| |||| | |||  || ||||||| ||||| || |||||| ||||||||| | ||||||    
T  20004277 cataggcaatcgtgctaacactcctcttttttgctactaaatcctactaaaataaactgaaaaatcatgctaacaataacgtaagatgacctatcatca 20004179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 21845826 - 21845737
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattg-aaaaacatgcgaagaataacttaagatgac 99  Q
    |||||||||||||| ||||| ||||||| ||| || |||||| ||  ||||||| | || |||||||||  ||||||||| |||||||||    
T  21845826 cataggcaatcgttataataatcctcctcttttcttctaaaaacttttgaaaatgactgaaaaaacatgttaagaataacgtaagatgac 21845737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 8066664 - 8066704
Alignment:
Q  23 ttctaatactcctcctttttgctgctaaaacctaatgaaaa 63  Q
    ||||||||||| |||||||||||||||||| ||| ||||||    
T  8066664 ttctaatactcttcctttttgctgctaaaatctactgaaaa 8066704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 21036957 - 21037017
Alignment:
Q  38 tttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatga 98  Q
    |||||| |||||||||||| | ||||||| |||||||||||  |||||| || ||||||||    
T  21036957 tttttgttgctaaaacctactaaaaataactgaaaaacatgataagaatgacgtaagatga 21037017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 19003862 - 19003765
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| |||||| |||||||||||    
T  19003862 catagacaattgttctaatactcatcctttttgctgctaaaacctactgaaaataactgaaaaacatgccaagaataacgtaagatcacatgtcatca 19003765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 34132086 - 34132183
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||  |||||||||||| |||||    
T  34132086 cataggcagtcgttctaatacttctcctttttgctgctaaaacctaatgaaaatagctgaaaaacatgctaagaataaagtaagatgacatgccatca 34132183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 23338892 - 23338988
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||| || | |||||| ||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||||    
T  23338892 cataggcaatcgttctaata-tcttgcttttttctgctaaaacctaatgaaaatgattgaaaaacatgctaagaataacctaagatgacctgtcatca 23338988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 23387644 - 23387547
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| | ||||||| ||||| ||| | ||||||    
T  23387644 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataagacgacctatcatca 23387547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 20860339 - 20860437
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| | |||||||||||| || | |||| ||||||||| |||||||||    
T  20860339 cataggcaattgttctaatacttctcctttttgctgctaaaacctactgaaaattaatgaaaaacatgctaacagtaacgtaagatgacctgtcatcac 20860437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 19053102 - 19053199
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||| |||||||||||||||||||||||||  |||| ||| ||||||||| ||| |||||||| ||||||||| ||| |||||||||||||||    
T  19053102 ataggcaattgttctaatactcctcctttttgctgtaaaaatctactgaaaataactgataaacatgctaagaataacgtaaaatgacatgtcatcac 19053199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 25400829 - 25400738
Alignment:
Q  17 caatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||| ||||||||| ||| ||||| | ||||||    
T  25400829 caatcgttctaatattcctcctttttcctgctaaaacctaatgaaaatgactgaaaaacatgctaagaataacgtaaaatgacctctcatca 25400738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 22797517 - 22797417
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    |||||||||||| ||||||||| ||||||||||||  |||||||||  |||||| | ||||||||||||||| |||||| ||||||||| |||||| |||    
T  22797517 cataggcaatcgctctaatacttctcctttttgctaataaaacctatcgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcattacc 22797418  T
Q  111 a 111  Q
    |    
T  22797417 a 22797417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 28666492 - 28666579
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatga 98  Q
    |||||||| || |||||||||| ||||||||||||||||||||||| ||||||| | |||||||||||  ||||||||| ||||||||    
T  28666492 cataggcagtcattctaatacttctcctttttgctgctaaaacctactgaaaatgaatgaaaaacatgataagaataacataagatga 28666579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 24320617 - 24320522
Alignment:
Q  13 taggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaat-aattgaaaaacatgcgaagaataacttaagatgacatgtcatc 107  Q
    |||| |||||| |||||||||| ||||||||||||||||||||| ||||||| |||  |||||||||  ||||||||| ||||||||| |||||||    
T  24320617 taggaaatcgtgctaatactccgcctttttgctgctaaaacctactgaaaatgaataaaaaaacatgttaagaataacgtaagatgacctgtcatc 24320522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 17469655 - 17469569
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatg 97  Q
    |||||||||| | |||||||||||||  |||||||| ||||||||  ||||||| |||||||||||||| ||||||||| |||||||    
T  17469655 cataggcaattgctctaatactcctctgttttgctggtaaaacctgctgaaaatgattgaaaaacatgctaagaataacgtaagatg 17469569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 23214922 - 23214824
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||   ||| |||||||||||||||| |||||||   || ||||||||| |||||||||||| ||||||||| ||||||||| |||||||||    
T  23214922 cataggcaatttctctcatactcctcctttttgttgctaaactgtattgaaaataactgaaaaacatgctaagaataacgtaagatgacctgtcatcac 23214824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 29987956 - 29988054
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttt-tgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| ||||||||||||||||||| |||||| ||||||||||| ||| | ||||| | |||||||||||| || |||||| ||||||||| ||||||||    
T  29987956 catatgcaatcgttctaatactccaccttttttgctgctaaaatctactaaaaatgactgaaaaacatgctaaaaataacgtaagatgacctgtcatca 29988054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 24142407 - 24142504
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| |||| |||||||||||||| |||||| |||||||  ||| | |||  || |||||||||||| ||||||||| ||||||||||||||||||    
T  24142407 cataggaaatctttctaatactcctcttttttgatgctaaattctactaaaataaactgaaaaacatgctaagaataacataagatgacatgtcatca 24142504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 24162108 - 24162009
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    ||||||||||  |||||||||| |||| |||||||| ||||| ||| ||||||| | |||||||||||| ||||||||| ||| ||||| ||||| ||||    
T  24162108 cataggcaattattctaatacttctccattttgctggtaaaatctattgaaaatgactgaaaaacatgctaagaataacgtaaaatgacctgtcaccacc 24162009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 24658397 - 24658332
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaaca 76  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||| | ||||| |||||||||||    
T  24658397 cataggctatcttactaatactcctcctttttgctgctaaaacctactaaaaatgattgaaaaaca 24658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 20548547 - 20548453
Alignment:
Q  14 aggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||||| ||||| |||||   |||| | |||  || |||||||||||| | ||||||| ||||||||| ||||||||    
T  20548547 aggcaatcgttctaatactcctccattttgttgctatttcctactaaaataaactgaaaaacatgctaggaataacgtaagatgacctgtcatca 20548453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 16522000 - 16521962
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgcta 49  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  16522000 cataggcaatcgttctaatactcctccattttgctgcta 16521962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 19006945 - 19006847
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||||||||| ||||| |||||   |||| | |||  || |||||||||| | ||||||||  ||||||||  |||||||||    
T  19006945 cataggcaatcgttctaatactcctccattttgttgctatttcctactaaaataaactgaaaaacatactaagaataatgtaagatgatctgtcatcac 19006847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 34488861 - 34488955
Alignment:
Q  15 ggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||| | |||||||||| ||  |||||||| |||| |||| | ||||| | |||||||||||| ||||||||| ||||||||| || ||||||    
T  34488861 ggcaattgatctaatactcatctgttttgctggtaaatcctactaaaaatgactgaaaaacatgctaagaataacgtaagatgacctgccatcac 34488955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 17831750 - 17831791
Alignment:
Q  68 tgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  17831750 tgaaaaacatgctaagaataacgtaagatgacatgtcatcac 17831791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 26069249 - 26069346
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| ||||| |||||||||||||||  || ||||| ||||| ||| ||||||| | | |||||||||  ||||||||| |||||| || ||||||||    
T  26069249 cataagcaattgttctaatactcctctgttctgctggtaaaatctactgaaaatgactaaaaaacatgttaagaataacgtaagataacttgtcatca 26069346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 26122382 - 26122479
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| |||| | |||||||||||||  |||||||| ||||||||| | ||||  | | |||||||||| |||||||| ||||||| || ||||||||    
T  26122382 catagacaattgctctaatactcctctgttttgctggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaagataacctgtcatca 26122479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 23110280 - 23110196
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||  |||||||| |||||||||  || ||| | | |||||||||  ||||||||| |||||||||| |||||||    
T  23110280 tctaatactcctctgttttgctgttaaaacctaccgataatgactaaaaaacatgttaagaataacgtaagatgacacgtcatca 23110196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 26117437 - 26117535
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||| ||||| ||||||| |||| ||  || ||||  ||||||||  ||||||| ||| |||||||||| ||||||||  |||||||||||| ||||||    
T  26117437 cataagcaattgttctaaaactcatctcttctgcttgtaaaacctgctgaaaatgattaaaaaacatgctaagaataatgtaagatgacatgccatcac 26117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 26315185 - 26315283
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataa-ttgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| |||| ||||||||||||||||  || ||||| |||||||||   |||||||    ||||| |||| ||||||||| ||||||||||||||||||    
T  26315185 cataagcaaccgttctaatactcctctcttatgctggtaaaacctacataaaataaccaaaaaaaaatgctaagaataacgtaagatgacatgtcatca 26315283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Original strand, 15691304 - 15691361
Alignment:
Q  47 ctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtc 104  Q
    |||||||||| ||||||| | | ||||| |||| ||||||||| ||||||||||||||    
T  15691304 ctaaaacctactgaaaatgactaaaaaatatgctaagaataacgtaagatgacatgtc 15691361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 25572538 - 25572477
Alignment:
Q  48 taaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||| ||||| | | |||||||||||| ||||||||| || |||||| |||||||||    
T  25572538 taaaacctactgaaattgactgaaaaacatgctaagaataacgtaggatgacttgtcatcac 25572477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 18832222 - 18832310
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgac 99  Q
    ||||| |||| | |||||||||||||  ||||| || ||||||||| ||||||  | |||||||||||| || |||||  |||||||||    
T  18832222 catagacaattgctctaatactcctctgttttgttggtaaaacctattgaaaaagactgaaaaacatgctaaaaataatgtaagatgac 18832310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 21352972 - 21353012
Alignment:
Q  68 tgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||| ||||||||| ||||||||| ||||||||    
T  21352972 tgaaaaacatgctaagaataacataagatgacctgtcatca 21353012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 18457208 - 18457107
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcacc 110  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| | ||||||| | ||||||||| ||||||||||    
T  18457208 cataggcaattgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaataacatcctaagaatagcgtaagatgacctgtcatcacc 18457109  T
Q  111 at 112  Q
    ||    
T  18457108 at 18457107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 34276534 - 34276436
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| | ||||||| |||| ||||||||| ||| ||||| |||||||||    
T  34276534 cataggcaatcgttataatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaaaatgacctgtcatcac 34276436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 12517290 - 12517387
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| | ||||||| |||| ||||||||| ||||||||| ||||||||    
T  12517290 cataggcaatcattctaatactcctcctttttgctactaaaacctactgaaaatgactgaaaaagatgctaagaataacgtaagatgacctgtcatca 12517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 19912586 - 19912677
Alignment:
Q  17 caatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||| | ||||||| |||| ||||||||| ||||||||| ||||||||    
T  19912586 caatcgttctaatactcctcttttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaagatgacctgtcatca 19912677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 25851045 - 25850952
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtc 104  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||| | ||||||| |||||||||||| ||||||||| ||||||||| ||||    
T  25851045 cataggcaatcgttttaatactcctcctttctgctgctaaatcctactaaaaataactgaaaaacatgctaagaataacataagatgacctgtc 25850952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 8115391 - 8115305
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatg 97  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| || ||||||||| || |||||| |||||||    
T  8115391 cataggcaatcgttctaatactcctcctttttgctactaaaacctactcaaaataactggaaaacatgctaaaaataacgtaagatg 8115305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 8145248 - 8145342
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtca 105  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||| ||||| | |||||||||||||| ||||||||  ||||||||| |||||    
T  8145248 cataggcaattgttttaatactcctcatttttgctgctaaaacctactgaaattgattgaaaaacatgctaagaataatgtaagatgacctgtca 8145342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 8765674 - 8765761
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatga 98  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||| ||||||| | |||||||||||| ||||||||| || |||||    
T  8765674 cataggaaatcgttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaggatga 8765761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 8770564 - 8770651
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatga 98  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||| ||||||| | |||||||||||| ||||||||| || |||||    
T  8770564 cataggaaatcgttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaggatga 8770651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 1096857 - 1096760
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||| || ||||||||||||||||||||||  | ||||||| | | |||||||||| ||||||||| ||||||||| |||||||||    
T  1096857 cataggcaatcgttctagtaatcctcctttttgctgctaaaactgactgaaaatgact-aaaaacatgcaaagaataacgtaagatgacctgtcatcac 1096760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 13938939 - 13938845
Alignment:
Q  15 ggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| |  || || ||||||| ||||||||| ||| ||||| |||||||||    
T  13938939 ggcaatcgttctaatactcctcctttttggtgctaaaacctactgaaattgctttaacaacatgctaagaataacgtaaaatgacctgtcatcac 13938845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 16242290 - 16242194
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||||| |||||| ||||||||| ||| | ||||| | ||||||| |||| ||||||||| ||||||||| ||||||||    
T  16242290 cataggcaatcgttctaatactccttcttttttctgctaaaa-ctactaaaaatgagtgaaaaatatgctaagaataacgtaagatgacctgtcatca 16242194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 12771292 - 12771211
Alignment:
Q  18 aatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgac 99  Q
    |||||||||||||||| || |||||||||||||||  || ||||||| | |||||||||||| ||||||||| |||||||||    
T  12771292 aatcgttctaatactcatcatttttgctgctaaaatatactgaaaatgactgaaaaacatgctaagaataacgtaagatgac 12771211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 20431472 - 20431517
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaaccta 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20431472 cataggcaatcgttctaatactcctcctttttgctgctaaaaccta 20431517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 22470499 - 22470402
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| ||||| | ||||| |||||||  |||||||| |||||| || ||||||| | |||||||||||| ||||||||| ||||||||||||||||||    
T  22470499 catatgcaattgctctaacactcctctgttttgctggtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacatgtcatca 22470402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 12372418 - 12372344
Alignment:
Q  22 gttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagat 96  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| ||||||||| |||| |||||| || ||||||    
T  12372418 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgattgaaaaaaatgctaagaattacgtaagat 12372344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 22246997 - 22247090
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtca 105  Q
    ||||| |||| | |||||||||||||  |||||||| ||||||||| ||||||| | ||||||| |||| ||||||||| |||||||||||||||    
T  22246997 catagtcaattgctctaatactcctctattttgctggtaaaacctactgaaaatgactgaaaaa-atgctaagaataacgtaagatgacatgtca 22247090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 52935602 - 52935532
Alignment:
Q  39 ttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||| ||||||||| ||||||| |||||||||||||| ||||||||| ||||||||| | |||||||    
T  52935602 ttttgctggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctatcatcac 52935532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 16228441 - 16228344
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| |||||||||||||||||||||| |||||   |||| | |||  || |||||| ||||| ||||||||| ||||||||| ||||||||    
T  16228441 cataggcaatagttctaatactcctcctttttgttgctatttcctactaaaataaactgaaaagcatgctaagaataacgtaagatgacctgtcatca 16228344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 21740479 - 21740576
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| ||||||||| || ||||||| ||||||||  ||||| |||||||||||||||||||||||| |  | |||||| ||||||||  ||||||||    
T  21740479 catagtcaatcgttcaaaaactcctcatttttgctattaaaatctaatgaaaataattgaaaaacatacttaaaataacgtaagatgaattgtcatca 21740576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 2166134 - 2166035
Alignment:
Q  8 aagcataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatc 107  Q
    |||||||  |||||||| |||||||||||||||||| |||||||||||| ||||||| |   |||||||||| ||||||||| ||  ||||| |||||||    
T  2166134 aagcatattcaatcgttttaatactcctcctttttgttgctaaaacctactgaaaatga-caaaaaacatgccaagaataacgtatcatgacctgtcatc 2166036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 20021908 - 20021817
Alignment:
Q  17 caatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||| |||||||||||   | || | |||  || |||||||||||| |||| |||| ||||||||||||||||||    
T  20021908 caatcgttctaatactcctccattttgctgctatttcatactaaaataaactgaaaaacatgctaagagtaacgtaagatgacatgtcatca 20021817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 109
Target Start/End: Original strand, 7805779 - 7805840
Alignment:
Q  48 taaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||| || ||||||| |||||||||||||| ||||||||| ||||||||| |||||||||    
T  7805779 taaaacatactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctgtcatcac 7805840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 18535770 - 18535867
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| ||||| | |||||||||||||   ||||||| ||||||||| | ||| | | |||||||||||| ||||||||| ||||||||| ||||||||    
T  18535770 cataagcaattgatctaatactcctctgctttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacttgtcatca 18535867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 20886905 - 20886965
Alignment:
Q  48 taaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| ||||||||| ||||||||    
T  20886905 taaaacctattgaaaacgattgaaaaacatgctaagaataacgtaagatgacctgtcatca 20886965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 26092952 - 26093003
Alignment:
Q  58 tgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||| |||| ||||||||  |||||||||||||||||||    
T  26092952 tgaaaataattgaaaaatatgctaagaataatgtaagatgacatgtcatcac 26093003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 2508797 - 2508719
Alignment:
Q  30 actcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| ||||||| |||| |||||| || ||||||| | |||||||||| | ||||||||| |||||||||||| |||||    
T  2508797 actcatccttttcgctgttaaaacttactgaaaatgactgaaaaacatactaagaataacgtaagatgacatgccatca 2508719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 8881498 - 8881460
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgcta 49  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  8881498 cataggcaatcgttctaatactcctcctttttgttgcta 8881460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 14977806 - 14977892
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatg 97  Q
    |||||||||| ||| |||||||||||||||||||| ||||| | || | |||  || ||||||| |||| ||||||||| |||||||    
T  14977806 cataggcaattgttataatactcctcctttttgctactaaatcatactaaaataaactgaaaaatatgctaagaataacgtaagatg 14977892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 27073952 - 27074050
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||| ||| |||||||||||||||| |||||||||||   |||| | |||  || |||||||||||| || |||||| ||||||||| | |||||||    
T  27073952 catagggaattgttctaatactcctccattttgctgctatttcctattaaaataaactgaaaaacatgctaaaaataacgtaagatgacctatcatcac 27074050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 819930 - 819845
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||  || ||||  ||||||||| ||||| | | |||||||||||| ||||||||| ||||||||| | |||||||    
T  819930 tctaatactcctctattatgcttgtaaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacctatcatcac 819845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 19909126 - 19909029
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| |||||||||||||||||| |||||||||||||   |||| | | |  || |||||||||| | |  |||||| ||||||||||||||||||    
T  19909126 catagggaatcgttctaatactccttctttttgctgctatttcctactaatataaactgaaaaacattctacaaataacgtaagatgacatgtcatca 19909029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 3429308 - 3429225
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaata-attgaaaaacatgcgaagaataacttaagatgacatgtcatc 107  Q
    |||||||||||||   ||||||| ||||||||| | |||||| | |||||||||||  ||||||||| |||||||||||||||||    
T  3429308 tctaatactcctctggtttgctggtaaaacctact-aaaatagaatgaaaaacatgataagaataacgtaagatgacatgtcatc 3429225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 3114806 - 3114728
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataac 89  Q
    ||||||||||   |||||||||||||  |||||||| ||||||||| || |||  | |||||||||||| |||||||||    
T  3114806 cataggcaattactctaatactcctctgttttgctggtaaaacctactgtaaaagactgaaaaacatgctaagaataac 3114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 19170054 - 19170087
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgc 44  Q
    ||||||||||||| ||||||||||||||||||||    
T  19170054 cataggcaatcgtgctaatactcctcctttttgc 19170087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 31283963 - 31283902
Alignment:
Q  48 taaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||| | ||||| |||||||||||||  ||||||||| | ||||||| |||||||||    
T  31283963 taaaacctacttaaaatgattgaaaaacatgataagaataacgttagatgacctgtcatcac 31283902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 19170236 - 19170144
Alignment:
Q  13 taggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtca 105  Q
    |||| ||| ||| ||||||||||| ||||| ||||||||||| | ||||| | |  ||||||||||| |||||||    ||||||||||||||    
T  19170236 taggaaattgttttaatactcctcgttttttctgctaaaaccaactgaaattgaccgaaaaacatgctaagaatagtgcaagatgacatgtca 19170144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 24516597 - 24516637
Alignment:
Q  68 tgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||| ||||||||| |||| |||||||||||||    
T  24516597 tgaaaaacatgctaagaataacataaggtgacatgtcatca 24516637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 23036 - 23134
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||| |||||| ||||||| | ||||||||| |||||||||    
T  23036 cataggcaatcgttctaatactcctcctttttggtgctaacacctaattaaaataactgaaatacatgctaagaatagcataagatgacctgtcatcac 23134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 4824 - 4921
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| | ||||||| ||||| ||| | ||||||    
T  4824 cataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataagacgacctatcatca 4921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 18758301 - 18758386
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagat 96  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| || |||||| ||||||    
T  18758301 cataggcaatcgttctaatactcctcctttttgctactaaaacctactgaaaataattaaaaaacatgctaaaaataacgtaagat 18758386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 17350978 - 17351076
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||| |||| ||||||||||||||| |||||| |||||||||||| ||||||||| ||||||| |||  ||||||||| ||||||||| |||||||||    
T  17350978 catagacaattgttctaatactcctcatttttgttgctaaaacctactgaaaataactgaaaaatatgttaagaataacgtaagatgacttgtcatcac 17351076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 28918188 - 28918286
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||| ||||||| | |||||||||||| ||||||||| ||| ||||  |||||||||    
T  28918188 cataggcaattgttctaatactcctcctttttgtagctaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaaaatgatttgtcatcac 28918286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 24086403 - 24086310
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtc 104  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||  || |||||||||||| ||||||||| |||| |||| ||||    
T  24086403 cataggcaatcgttctaatactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagttgacctgtc 24086310  T

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Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 18120642 - 18120546
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatc 107  Q
    ||||||||||||||||||||||||||| |||||||||||   |||| | |||  || |||||||||||| ||||||||| |||||||||||||||||    
T  18120642 cataggcaatcgttctaatactcctccattttgctgctatttcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacatgtcatc 18120546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 26313179 - 26313275
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| ||||||||||||||| | |||||||||||||||||||| ||||| | ||| |||||||||| ||||||||  ||||||||| ||||||||    
T  26313179 ataggcgatcgttctaatactcattctttttgctgctaaaacctactgaaattgattaaaaaacatgctaagaataatgtaagatgacttgtcatca 26313275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 25196611 - 25196709
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||| ||||||| ||| |||||||||||||| |||| | |||  || |||||||||||  ||||||||| |||||||||||||||||||    
T  25196611 cataggcaatcgttttaatacttctcttttttgctgctaaatcctactaaaataaactgaaaaacatgttaagaataacataagatgacatgtcatcac 25196709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 25886288 - 25886190
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||| ||||||||||||||||| ||||||||  |||||||||||||||||||| |  ||||||||||  || |||||| ||||||||| |||||||||    
T  25886288 catagacaatcgttctaatactcttccttttttatgctaaaacctaatgaaaatgacagaaaaacatgataaaaataacgtaagatgacctgtcatcac 25886190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 17891744 - 17891829
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||  |||||||| ||||||||| ||||||| | |||||||||||  ||||||||| |||||||||||||||||||    
T  17891744 tctaatactcctctgttttgctggtaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgtcatcac 17891829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 21905738 - 21905823
Alignment:
Q  23 ttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||| |||||||||| ||  |||||| | |||||||||||| ||||||||| ||||||||| ||||||||    
T  21905738 ttctaatactcctcctttttcctgctaaaacatacagaaaatgactgaaaaacatgctaagaataacataagatgacctgtcatca 21905823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 25532236 - 25532334
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||||||||||||||||||||||||||||||||   |||| | |||  || |||||||||||| ||||||||| ||| ||||| || ||||||    
T  25532236 cataggcaatcgttctaatactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaataacgtaaaatgacttgccatcac 25532334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 22569054 - 22569142
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgac 99  Q
    |||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||| | | |||||||||||  ||||||||| |||||||||    
T  22569054 cataggtaatcgttctaatacttctcattttttctgctaaaacctactgaaattgactgaaaaacatggtaagaataacataagatgac 22569142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 23010127 - 23010043
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||| | |||||||| ||||||||| ||||||| | |||||||||||| ||||||||| ||||||||| ||| ||||    
T  23010127 tctaatactccttcgttttgctggtaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaagatgacttgttatca 23010043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 27907619 - 27907521
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    |||||||||| ||| ||||||| |||||||||| ||||||||| || ||||||| | |||||||||||| ||||||||  |||| |||| | |||||||    
T  27907619 cataggcaatagttttaatacttctcctttttgttgctaaaacttactgaaaatgactgaaaaacatgctaagaataatgtaaggtgacctatcatcac 27907521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 29144634 - 29144732
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgct-gctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||| |||| |||||||| |||||||||||||| ||||||||||| ||  ||| | | |||||||||| ||||||||| ||||||||| ||||||||    
T  29144634 cataggaaatcattctaatattcctcctttttgcttgctaaaacctattggtaatgactaaaaaacatgctaagaataacgtaagatgacctgtcatca 29144732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 34574513 - 34574611
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataa-ttgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||| ||||||||||||||||||| ||| ||  ||||||||| ||||||||| |  |||||||||| ||||||||| ||||||||| ||| ||||    
T  34574513 cataggcattcgttctaatactcctcctattttctattaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctgtaatca 34574611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 25537556 - 25537653
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||| ||||||||||||||||||| ||| ||   |||| | |||  || |||||||||||| ||||||||| ||||||||| ||||||||    
T  25537556 cataggcaatcgctctaatactcctcctttttactgttatttcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgtcatca 25537653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 35680197 - 35680100
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| |||| | |||||||||||||  |||||||| ||||||||| ||||||| | | |||||||||| ||||||||| ||||||| | ||||||||    
T  35680197 catagacaattgctctaatactcctctgttttgctggtaaaacctactgaaaatgacttaaaaacatgctaagaataacgtaagatggcctgtcatca 35680100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 20379286 - 20379384
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||| ||||||||||||||||||||||||||||| |||   |||| | |||  || |||||||||| | ||||||||| | ||||||| |||||||||    
T  20379286 catagacaatcgttctaatactcctcctttttgctcctatttcctactaaaataaactgaaaaacatcctaagaataacattagatgacctgtcatcac 20379384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 20853086 - 20853178
Alignment:
Q  16 gcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||||||||| |||||  | || | |||  || | |||||||||| || |||||| | ||||||||||||||||    
T  20853086 gcaatcgttctaatactcctcctttttgcagctaattcttactaaaataaacttaaaaacatgctaataataacgtgagatgacatgtcatca 20853178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 29892228 - 29892286
Alignment:
Q  49 aaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatc 107  Q
    |||||||| ||||||||| ||||||| |||  ||||||||| |||||||||||||||||    
T  29892228 aaaacctattgaaaataactgaaaaatatgttaagaataacgtaagatgacatgtcatc 29892286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 27540355 - 27540274
Alignment:
Q  18 aatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgac 99  Q
    ||||||||||||| ||||| |||||  |||||||||||| ||||||| | ||||||| |||| |||| |||| ||| |||||    
T  27540355 aatcgttctaatattcctcattttttatgctaaaacctactgaaaatgactgaaaaatatgctaagagtaacgtaatatgac 27540274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 16157143 - 16157084
Alignment:
Q  49 aaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||| ||||||| | |||||||||||| ||||||||  ||||||||| ||||||||    
T  16157143 aaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagatgacctgtcatca 16157084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 34369372 - 34369425
Alignment:
Q  60 aaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcaccatt 113  Q
    ||||||| |||||||||||| ||||||||| ||||||||  |||||||| ||||    
T  34369372 aaaataactgaaaaacatgctaagaataacataagatgatctgtcatcagcatt 34369425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 6461 - 6550
Alignment:
Q  19 atcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||| |||||| ||||||| |||| ||||||||| |||||||||||| ||||||||| |||||| |||||||||||    
T  6461 atcgttctaatactcctcatttttgttgctaaatcctattgaaaataactgaaaaacatgctaagaataacgtaagataacatgtcatca 6550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 20349 - 20252
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||||||||||||||||||||||||||||   |||| | || | ||||||||||||||| ||||||||| ||||||||| ||||||||    
T  20349 cataggcaatcgttctaatactcctcctttttgctgctatttcctactaaataaaattgaaaaacatgctaagaataacgtaagatgacttgtcatca 20252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 92924 - 92828
Alignment:
Q  12 ataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||| | ||||||| ||||| |||||||||||||| |||| | ||||||| |||||||||||| ||||||||| |||||| || ||||||||    
T  92924 ataggcaatggctctaatattcctcttttttgctgctaaaccctactaaaaataactgaaaaacatgctaagaataacgtaagataacttgtcatca 92828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 88533 - 88435
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatcac 109  Q
    ||||| |||| | ||||| |||||||  ||||  || ||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  88533 catagacaattgctctaagactcctctatttttttggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacatgtcatcac 88435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 41339 - 41435
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||| | |||||||||||||  |||||||| ||||||||| | ||||||| |||||||||||| ||||||||| ||||||||  ||||||||    
T  41339 cataggcaattgatctaatactcctctgttttgctggtaaaacctactaaaaataactgaaaaacatgctaagaataac-taagatgagctgtcatca 41435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 182608 - 182511
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||  || |||||||||||  |  || ||  ||||||||||||||||||    
T  182608 cataggcaatcgttctaatactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatgttatcaaaaatataagatgacatgtcatca 182511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 24839 - 24899
Alignment:
Q  48 taaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||||||| | ||||| | |||||||||||| ||||||||| ||||||||||||| ||||    
T  24839 taaaacctattcaaaatgactgaaaaacatgctaagaataacataagatgacatgttatca 24899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 35215 - 35271
Alignment:
Q  48 taaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtc 104  Q
    ||||||||| ||||||| | |||||||||||| ||||||||| |||||| |||||||    
T  35215 taaaacctattgaaaatgactgaaaaacatgctaagaataacataagataacatgtc 35271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 192122 - 192219
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| ||||||| ||||| |||||| | |||||||||||||||||| ||||||| | |||||| ||||| || |||||| ||||||||| ||||||||    
T  192122 cataagcaatcgctctaacactccttcattttgctgctaaaacctattgaaaatgactgaaaaccatgctaaaaataacgtaagatgacctgtcatca 192219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 95624 - 95690
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacat 77  Q
    |||||||||||||||||||||||||| ||||||||||||||||| | ||||| | | ||||||||||    
T  95624 cataggcaatcgttctaatactcctcttttttgctgctaaaacccattgaaattgactgaaaaacat 95690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 5730 - 5827
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    ||||| |||| |||||||||||||||||||||||| ||||| |||| | ||||||| |||||||||||  || ||||||  |||||||| | ||||||    
T  5730 catagacaattgttctaatactcctcctttttgcttctaaatcctactaaaaataactgaaaaacatgttaaaaataacgaaagatgacctttcatca 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 21440 - 21537
Alignment:
Q  11 cataggcaatcgttctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||| ||||| |||||| ||||| |||||||||||||||||||||| ||||| ||| ||||||||||   ||||||| | ||||||||  ||||||||    
T  21440 cataagcaattgttctactactcatcctttttgctgctaaaacctactgaaattaactgaaaaacatcgtaagaatatcgtaagatgatctgtcatca 21537  T

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Target: scaffold0386 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 4956 - 4874
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcat 106  Q
    |||||||||||||   ||||||| ||||||||| | ||| | | |||||||||||| ||||||||| ||||||||| ||||||    
T  4956 tctaatactcctctactttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaagatgacttgtcat 4874  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 36199 - 36143
Alignment:
Q  40 tttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagat 96  Q
    ||||||| ||||||||| ||||||| | |||||||||||  ||||||||| ||||||    
T  36199 tttgctgataaaacctattgaaaatgactgaaaaacatgataagaataacgtaagat 36143  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 243914 - 243831
Alignment:
Q  24 tctaatactcctcctttttgctgctaaaacctaatgaaaataattgaaaaacatgcgaagaataacttaagatgacatgtcatca 108  Q
    |||||||||||||  |||||||  ||||||||| | ||||| | | ||||| |||| ||||||||| |||||||| |||||||||    
T  243914 tctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagatgatatgtcatca 243831  T

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