View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11909_high_3 (Length: 506)

Name: NF11909_high_3
Description: NF11909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11909_high_3
NF11909_high_3
[»] chr4 (37 HSPs)
chr4 (1-506)||(11783198-11783705)
chr4 (1-86)||(12608733-12608818)
chr4 (1-80)||(17109557-17109636)
chr4 (12-80)||(25097170-25097238)
chr4 (318-454)||(25483390-25483526)
chr4 (318-428)||(15841334-15841444)
chr4 (1-77)||(13131039-13131116)
chr4 (319-439)||(44620422-44620539)
chr4 (349-454)||(55933121-55933226)
chr4 (100-178)||(2741020-2741099)
chr4 (327-454)||(3244426-3244553)
chr4 (298-379)||(19895425-19895506)
chr4 (329-454)||(50630731-50630857)
chr4 (326-454)||(22027935-22028063)
chr4 (318-417)||(39404109-39404209)
chr4 (327-454)||(54017569-54017697)
chr4 (12-87)||(9054862-9054937)
chr4 (362-445)||(19504759-19504842)
chr4 (328-454)||(36629291-36629418)
chr4 (367-445)||(1731662-1731740)
chr4 (296-428)||(23817623-23817757)
chr4 (101-165)||(36629199-36629264)
chr4 (401-454)||(41370411-41370464)
chr4 (101-156)||(52884856-52884914)
chr4 (296-445)||(22028311-22028462)
chr4 (318-365)||(34544249-34544295)
chr4 (400-454)||(3271841-3271895)
chr4 (327-417)||(36608636-36608726)
chr4 (101-165)||(44620619-44620687)
chr4 (327-428)||(23556842-23556942)
chr4 (359-428)||(32941130-32941199)
chr4 (327-428)||(39792835-39792936)
chr4 (318-417)||(44621093-44621189)
chr4 (400-445)||(49302969-49303014)
chr4 (400-445)||(54936259-54936304)
chr4 (318-417)||(10246010-10246110)
chr4 (348-456)||(28034281-28034389)
[»] chr2 (36 HSPs)
chr2 (1-100)||(16815607-16815706)
chr2 (1-100)||(16854764-16854863)
chr2 (119-224)||(41678518-41678624)
chr2 (12-98)||(23009177-23009263)
chr2 (296-445)||(6421794-6421944)
chr2 (296-454)||(42514703-42514861)
chr2 (327-465)||(41678338-41678482)
chr2 (308-445)||(23346299-23346436)
chr2 (12-80)||(28919044-28919112)
chr2 (297-442)||(37105990-37106136)
chr2 (318-454)||(14745634-14745771)
chr2 (101-165)||(28531445-28531510)
chr2 (327-472)||(33561429-33561573)
chr2 (12-80)||(25923474-25923541)
chr2 (327-455)||(29873514-29873642)
chr2 (318-454)||(30313231-30313367)
chr2 (296-454)||(35580669-35580827)
chr2 (296-454)||(6421439-6421597)
chr2 (297-454)||(36178552-36178709)
chr2 (318-379)||(30312919-30312980)
chr2 (396-453)||(33953817-33953874)
chr2 (327-445)||(6422173-6422291)
chr2 (100-165)||(30323424-30323492)
chr2 (100-165)||(33561581-33561647)
chr2 (325-454)||(41283449-41283579)
chr2 (297-454)||(962652-962808)
chr2 (100-158)||(7598577-7598637)
chr2 (327-454)||(5542602-5542729)
chr2 (391-454)||(15880317-15880380)
chr2 (109-199)||(30313104-30313197)
chr2 (109-158)||(40679768-40679818)
chr2 (348-454)||(40733571-40733677)
chr2 (102-165)||(3673044-3673111)
chr2 (391-444)||(14745335-14745388)
chr2 (100-159)||(29873667-29873729)
chr2 (348-444)||(29874021-29874117)
[»] chr7 (35 HSPs)
chr7 (318-456)||(1085584-1085722)
chr7 (12-95)||(8316226-8316309)
chr7 (1-87)||(4985919-4986005)
chr7 (1-87)||(4990017-4990103)
chr7 (1-80)||(19202292-19202371)
chr7 (337-454)||(7517634-7517751)
chr7 (1-100)||(12389378-12389474)
chr7 (297-454)||(37533310-37533468)
chr7 (351-472)||(37345954-37346074)
chr7 (4-80)||(20578302-20578377)
chr7 (318-429)||(37345660-37345771)
chr7 (1-80)||(39269434-39269512)
chr7 (329-454)||(30244324-30244449)
chr7 (338-454)||(45433295-45433411)
chr7 (323-454)||(6054614-6054745)
chr7 (359-454)||(34218043-34218138)
chr7 (400-454)||(23427-23481)
chr7 (50-99)||(5107695-5107744)
chr7 (7-80)||(13251950-13252022)
chr7 (314-371)||(30244489-30244546)
chr7 (341-454)||(45434690-45434803)
chr7 (119-165)||(37345878-37345925)
chr7 (100-158)||(40094524-40094583)
chr7 (327-372)||(7517982-7518028)
chr7 (101-165)||(7553984-7554052)
chr7 (400-454)||(22566712-22566766)
chr7 (325-454)||(29157619-29157749)
chr7 (327-379)||(7517786-7517839)
chr7 (327-379)||(7518052-7518105)
chr7 (318-454)||(22567006-22567143)
chr7 (318-355)||(30253723-30253760)
chr7 (349-454)||(40094773-40094878)
chr7 (326-427)||(47129450-47129550)
chr7 (326-454)||(11845245-11845373)
chr7 (323-438)||(30032637-30032753)
[»] chr5 (31 HSPs)
chr5 (12-98)||(34489723-34489809)
chr5 (1-83)||(31213335-31213417)
chr5 (1-74)||(25405264-25405337)
chr5 (1-80)||(9834315-9834394)
chr5 (318-445)||(32487456-32487583)
chr5 (1-80)||(19053946-19054025)
chr5 (326-456)||(1028492-1028623)
chr5 (297-454)||(6500504-6500663)
chr5 (327-454)||(27502013-27502140)
chr5 (327-454)||(18603097-18603224)
chr5 (327-454)||(40296292-40296419)
chr5 (328-454)||(3295323-3295448)
chr5 (100-165)||(24489334-24489400)
chr5 (321-454)||(25327989-25328123)
chr5 (100-165)||(36522026-36522092)
chr5 (318-419)||(3622858-3622958)
chr5 (3-83)||(31599257-31599338)
chr5 (327-454)||(13415738-13415864)
chr5 (351-454)||(26074666-26074769)
chr5 (101-158)||(13415891-13415951)
chr5 (350-452)||(26074146-26074248)
chr5 (109-198)||(31509550-31509642)
chr5 (327-472)||(31509767-31509912)
chr5 (325-454)||(34753001-34753129)
chr5 (12-80)||(20547609-20547675)
chr5 (327-454)||(15370456-15370583)
chr5 (400-447)||(36521946-36521993)
chr5 (367-454)||(41170688-41170775)
chr5 (307-369)||(36527048-36527110)
chr5 (109-153)||(26074285-26074330)
chr5 (327-454)||(36568545-36568671)
[»] chr3 (40 HSPs)
chr3 (1-99)||(12770397-12770494)
chr3 (295-454)||(41359709-41359869)
chr3 (1-80)||(34275672-34275753)
chr3 (4-76)||(19166517-19166589)
chr3 (12-95)||(16226153-16226236)
chr3 (7-80)||(8771386-8771458)
chr3 (352-453)||(47964521-47964621)
chr3 (323-454)||(42342360-42342492)
chr3 (318-454)||(54017784-54017920)
chr3 (1-80)||(8766497-8766575)
chr3 (1-80)||(19913401-19913479)
chr3 (327-454)||(32589757-32589884)
chr3 (101-158)||(9240118-9240176)
chr3 (297-454)||(54018144-54018302)
chr3 (296-441)||(52634742-52634887)
chr3 (12-80)||(8880580-8880647)
chr3 (296-454)||(29644844-29645006)
chr3 (318-454)||(37990944-37991081)
chr3 (318-454)||(15772908-15773044)
chr3 (1-80)||(8146653-8146731)
chr3 (359-454)||(39934964-39935059)
chr3 (318-379)||(3135422-3135483)
chr3 (102-158)||(21832475-21832532)
chr3 (12-76)||(13586419-13586482)
chr3 (330-454)||(25755448-25755572)
chr3 (349-417)||(37726587-37726655)
chr3 (296-374)||(9239947-9240026)
chr3 (296-445)||(33803197-33803347)
chr3 (391-445)||(22303700-22303754)
chr3 (296-379)||(22304322-22304408)
chr3 (101-165)||(42342221-42342289)
chr3 (101-164)||(22304208-22304273)
chr3 (104-159)||(2299942-2300000)
chr3 (296-348)||(3135048-3135100)
chr3 (401-445)||(3384317-3384361)
chr3 (127-159)||(8328346-8328378)
chr3 (101-159)||(15773157-15773219)
chr3 (327-428)||(15773272-15773375)
chr3 (327-454)||(37990615-37990743)
chr3 (317-349)||(47157659-47157691)
[»] chr8 (35 HSPs)
chr8 (1-99)||(21320387-21320482)
chr8 (1-80)||(29762014-29762093)
chr8 (314-502)||(4154632-4154825)
chr8 (1-80)||(17099376-17099455)
chr8 (1-80)||(25231513-25231592)
chr8 (318-445)||(147514-147641)
chr8 (1-78)||(17511743-17511819)
chr8 (318-454)||(3669741-3669877)
chr8 (327-428)||(20995393-20995494)
chr8 (1-80)||(15175609-15175687)
chr8 (296-454)||(18371939-18372098)
chr8 (318-456)||(3038256-3038396)
chr8 (1-80)||(24721514-24721593)
chr8 (296-442)||(40518137-40518284)
chr8 (328-421)||(2467587-2467680)
chr8 (396-456)||(8918810-8918870)
chr8 (12-80)||(18571359-18571426)
chr8 (296-428)||(34834956-34835087)
chr8 (327-454)||(20870550-20870677)
chr8 (327-454)||(30441139-30441266)
chr8 (327-454)||(34835263-34835390)
chr8 (327-454)||(34835529-34835656)
chr8 (327-454)||(34835795-34835922)
chr8 (101-165)||(1014002-1014068)
chr8 (350-456)||(4154281-4154386)
chr8 (100-165)||(40518544-40518610)
chr8 (318-456)||(9620646-9620782)
chr8 (296-454)||(45122678-45122841)
chr8 (101-165)||(147788-147856)
chr8 (327-440)||(147888-148000)
chr8 (359-444)||(3670124-3670209)
chr8 (350-454)||(25561815-25561920)
chr8 (325-441)||(6876837-6876953)
chr8 (101-159)||(18372502-18372562)
chr8 (326-445)||(32640507-32640627)
[»] chr6 (34 HSPs)
chr6 (10-96)||(11176763-11176849)
chr6 (296-454)||(35210258-35210416)
chr6 (1-98)||(22570696-22570794)
chr6 (296-454)||(16454629-16454788)
chr6 (296-454)||(16107732-16107893)
chr6 (297-454)||(29518557-29518715)
chr6 (327-443)||(16454972-16455088)
chr6 (327-456)||(2578420-2578549)
chr6 (318-443)||(12071659-12071784)
chr6 (328-472)||(12092460-12092604)
chr6 (296-454)||(2579818-2579976)
chr6 (328-454)||(10074341-10074467)
chr6 (326-454)||(32741233-32741361)
chr6 (327-454)||(29518974-29519101)
chr6 (297-454)||(2377808-2377966)
chr6 (296-417)||(2578780-2578902)
chr6 (102-199)||(6071058-6071158)
chr6 (322-379)||(30618590-30618646)
chr6 (323-447)||(31714730-31714854)
chr6 (350-454)||(1127414-1127518)
chr6 (15-87)||(22525849-22525921)
chr6 (119-165)||(10074512-10074559)
chr6 (100-165)||(16108022-16108091)
chr6 (46-92)||(28588295-28588341)
chr6 (101-165)||(29518881-29518947)
chr6 (320-377)||(33605771-33605829)
chr6 (100-159)||(3409627-3409688)
chr6 (100-164)||(8481888-8481954)
chr6 (101-165)||(10073745-10073810)
chr6 (7-52)||(21844923-21844968)
chr6 (318-454)||(2579460-2579596)
chr6 (350-454)||(10073991-10074095)
chr6 (398-454)||(32460628-32460684)
chr6 (101-164)||(33605938-33606002)
[»] chr1 (27 HSPs)
chr1 (1-80)||(18828208-18828287)
chr1 (296-454)||(31767107-31767265)
chr1 (296-454)||(9955962-9956122)
chr1 (318-428)||(47380134-47380245)
chr1 (318-456)||(17294629-17294768)
chr1 (329-472)||(19283434-19283577)
chr1 (296-454)||(26661843-26662002)
chr1 (297-454)||(44290769-44290929)
chr1 (327-454)||(26661499-26661626)
chr1 (296-454)||(34364561-34364720)
chr1 (296-440)||(34649506-34649651)
chr1 (318-454)||(50051992-50052127)
chr1 (101-158)||(22077253-22077311)
chr1 (109-157)||(22077634-22077683)
chr1 (109-165)||(30630777-30630834)
chr1 (296-454)||(41157045-41157206)
chr1 (119-158)||(66238-66278)
chr1 (354-454)||(34364979-34365079)
chr1 (12-87)||(16115649-16115724)
chr1 (327-454)||(44290435-44290562)
chr1 (400-454)||(66137-66191)
chr1 (101-165)||(3537278-3537344)
chr1 (339-445)||(3537589-3537694)
chr1 (400-454)||(3550774-3550828)
chr1 (359-445)||(32168707-32168793)
chr1 (326-454)||(3875307-3875435)
chr1 (327-379)||(5996814-5996866)
[»] scaffold0391 (2 HSPs)
scaffold0391 (318-379)||(1651-1712)
scaffold0391 (400-454)||(1741-1795)
[»] scaffold0702 (1 HSPs)
scaffold0702 (297-454)||(460-618)
[»] scaffold0078 (1 HSPs)
scaffold0078 (101-165)||(5316-5384)
[»] scaffold0113 (2 HSPs)
scaffold0113 (101-198)||(39766-39865)
scaffold0113 (318-365)||(39597-39644)


Alignment Details
Target: chr4 (Bit Score: 381; Significance: 0; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 506
Target Start/End: Original strand, 11783198 - 11783705
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaattttt 100  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||     
T  11783198 ataataatacctatctaactccaagtgaaatcaaactgagtgcatttaaagttcaggactgtgacatgattcgtcattaagtaactagaaagaaattttc 11783297  T
Q  101 gatgtggaacatataagacacacttgcacacaacact---cccctcaagtgtgagtccatcatttcataattctatcccctcaaaccgaagttctttcat 197  Q
    ||||||||| |||||| ||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11783298 gatgtggaaaatataacacacacttgcatacaacactactcccctcaagtgtgagtccatcatttcataattctatcccctcaaacggaagttctttcat 11783397  T
Q  198 ccacgagtattttgcgtgtaccaccgttgttgatttcttgacaatggaattgactgcccgcaaatacttgcgtgtacaaccattgcaagg-gttggggtt 296  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||||||| |||||   |    
T  11783398 ccacgagtattttgcttgtaccaccgttactgatttcttgacaatggaaccgaccgcccgtaaatacttgcgtgtacaaccattgcaaggagttggttgt 11783497  T
Q  297 acccttcgtggaaccgagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaa 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11783498 acccttcgtggaaccgagctttgataccactgttgggtcatgaggggtgccagggggaccacccacatctaggctagagcaactatacaagcgagagaaa 11783597  T
Q  397 cgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataaagggcttaacccccacttcaatgttggacatataactcacac 496  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11783598 cgacacactcttacccaaaactttatggcaataggtgtatgggtcctctcac--ataaagggcttaacctccacttcaatgttggacatataactcacac 11783695  T
Q  497 ttgcacccaa 506  Q
    ||||||||||    
T  11783696 ttgcacccaa 11783705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 12608733 - 12608818
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaaca 86  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  12608733 ataataatacatatctaacttcaagtgaaatcaaacatggtgcattaaaagttcaggactgtgacgtgattcgtcactaagtaaca 12608818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17109557 - 17109636
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||| |||||||    
T  17109557 ataataatacttatctaactccaagtgaaatcaaacaaggtgcatttaaagtgtaggattgtgacatgattcatcactaa 17109636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 25097170 - 25097238
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    ||||||||||| |||||||||||||||||| | | |||||| |||||||||||||||||||||||||||    
T  25097170 tatctaactccgagtgaaatcaaacagggttcgtgtaaagtgcaggactgtgacatgattcgtcactaa 25097238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 318 - 454
Target Start/End: Complemental strand, 25483526 - 25483390
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    |||||||||||||||||||   |||||||||||| ||||  ||||||| |||||||| |||| | ||||||  |||| ||  ||||||||||||||||||    
T  25483526 tgataccactgttgggtcactgggggagccagggagaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaac 25483427  T
Q  418 tttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||| |||||| ||| ||||| |||||| || |||||    
T  25483426 cttaaggcaatgggtttatggatcctcttacttataa 25483390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 15841334 - 15841444
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    |||||||||| |||||||| |||||||||| ||||| |||| || |  |||||||||||||| | ||||| | |||| || |||||||||||||||||||    
T  15841334 tgataccactattgggtcacgaggggagcccgggggcccactcataaataggctagagcaaccacacaagtgagagagacatcacactcttacccaaaac 15841433  T
Q  418 tttatggcaat 428  Q
     ||| ||||||    
T  15841434 cttaaggcaat 15841444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13131116 - 13131039
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgca-tttaaagttcaggactgtgacatgattcgtcac 77  Q
    |||||||||| ||||||| |||||||||||||||||| |||||| ||||||||  ||||||||||||| |||||||||    
T  13131116 ataataatacctatctaagtccaagtgaaatcaaacatggtgcattttaaagtgtaggactgtgacataattcgtcac 13131039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 439
Target Start/End: Complemental strand, 44620539 - 44620422
Alignment:
Q  319 gataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaact 418  Q
    |||||||||||||| ||||||| |||||   |||||||  ||||||| ||| |||| |||| | ||||||  ||||||| |||||||||||||||||||     
T  44620539 gataccactgttggatcatgagaggagc---ggggaccgtccacatcaaggttagaacaaccacacaagcaagagaaacatcacactcttacccaaaacc 44620443  T
Q  419 ttatggcaataggtgtatggg 439  Q
    ||| |||||| ||| ||||||    
T  44620442 ttaaggcaatgggtttatggg 44620422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 454
Target Start/End: Original strand, 55933121 - 55933226
Alignment:
Q  349 gggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcac 448  Q
    ||||||||  ||||||| |||||||| ||||| ||||||   |||| ||  |||||||||||||||||||||| |||||| ||| |||||||||||| ||    
T  55933121 gggggaccgtccacatcgaggctagaacaactgtacaagtaagagagacaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttac 55933220  T
Q  449 atataa 454  Q
     |||||    
T  55933221 ttataa 55933226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 2741099 - 2741020
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaacactcccc-tcaagtgtgagtccatcatttcataattctatcccct 178  Q
    |||||||| ||||||||  |||||||||||| |||||||||| |||||||||||||||||| ||||| || || ||||||    
T  2741099 tgatgtgggacatataactcacacttgcacataacactccccttcaagtgtgagtccatcaattcatcatgctctcccct 2741020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 3244426 - 3244553
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||||| ||||| || || ||||||  |||||||| ||||| || |||| ||||||| | |||| ||| |||| ||||||||||||||||| | ||    
T  3244426 tgttgggtcacgagggaagtcaaggggactgcccacatcgaggctggaacaaccatacaagtgagagagacgacacattcttacccaaaactttaagaca 3244525  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    ||  || |||||||||||| || |||||    
T  3244526 atgagtttatgggtcctcttacttataa 3244553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 379
Target Start/End: Complemental strand, 19895506 - 19895425
Alignment:
Q  298 cccttcgtggaaccga-gctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaac 379  Q
    |||||||| ||||||| ||| ||||||||||||||||||||| ||||||| | |||||||| ||||||| |||||||| ||||    
T  19895506 cccttcgtcgaaccgaagctctgataccactgttgggtcatggggggagctatggggacca-ccacatcgaggctagaacaac 19895425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 454
Target Start/End: Original strand, 50630731 - 50630857
Alignment:
Q  329 ttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaa 427  Q
    |||||||| |||||||||| ||| ||||| |||||||| |||||| | ||||   ||||||  |||| ||  |||||||||||||||||| ||| |||||    
T  50630731 ttgggtcagtgaggggagctaggcggaccgcccacatcgaggctaaaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaa 50630830  T
Q  428 taggtgtatgggtcctctcacatataa 454  Q
    | ||| |||||||||||| || |||||    
T  50630831 tgggtttatgggtcctcttacttataa 50630857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 454
Target Start/End: Original strand, 22027935 - 22028063
Alignment:
Q  326 ctgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggc 425  Q
    |||||||||||||||||||||| | |||||   ||||||| || ||| | |||| | | ||||| |||| ||  |||| ||||||||||||| ||| |||    
T  22027935 ctgttgggtcatgaggggagcctgagggactgtccacatcgagactaaaacaaccacataagcgagagagacaccacattcttacccaaaaccttaaggc 22028034  T
Q  426 aataggtgtatgggtcctctcacatataa 454  Q
    |||| || |||||||||||| || |||||    
T  22028035 aatatgtttatgggtcctcttacttataa 22028063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 417
Target Start/End: Complemental strand, 39404209 - 39404109
Alignment:
Q  318 tgataccactgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaa 416  Q
    ||||||||||||||| | | ||||||||||  ||||||||  ||||||| |||||||| |||| | ||||||  |||| ||| |||||||||||||||||    
T  39404209 tgataccactgttggattagtgaggggagctcgggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaa 39404110  T
Q  417 c 417  Q
    |    
T  39404109 c 39404109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 54017569 - 54017697
Alignment:
Q  327 tgttgggtcatgagggg-agccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggc 425  Q
    |||||||||| |||||| ||| |||| ||||  ||||||| |||||||| |||| | | ||||  |||| || ||||||||||||| ||||| ||| |||    
T  54017569 tgttgggtcaggagggggagctagggagaccgtccacatcgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaaggc 54017668  T
Q  426 aataggtgtatgggtcctctcacatataa 454  Q
    ||| ||| |||||||||||| || |||||    
T  54017669 aatgggtttatgggtcctcttacttataa 54017697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 9054862 - 9054937
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaa 87  Q
    |||||||||||||| |||||||||||   | | ||||| |||||| ||||||||||||||| ||||| ||||||||    
T  9054862 tatctaactccaagagaaatcaaacaaactacttttaaggttcagaactgtgacatgattcatcacttagtaacaa 9054937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 19504842 - 19504759
Alignment:
Q  362 catctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    |||| |||||||| |||| | ||||||  || | ||| |||||||||||||||||||||| |||||||| | ||||||||||||    
T  19504842 catcgaggctagaacaaccacacaagcaagatagacgccacactcttacccaaaactttaaggcaatagatttatgggtcctct 19504759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 454
Target Start/End: Complemental strand, 36629418 - 36629291
Alignment:
Q  328 gttgggtcat-gaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||||| |||||||||  | ||||||  ||||||| |||||||| |||| | ||||||  |||| ||  |||||||||||||||||| ||| ||||    
T  36629418 gttgggtcattgaggggagcatgtgggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggca 36629319  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    ||  || |||||||||||| || |||||    
T  36629318 atgagtttatgggtcctcttacttataa 36629291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 445
Target Start/End: Original strand, 1731662 - 1731740
Alignment:
Q  367 aggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    |||||||| |||| | ||||||  |||||||  |||||||||||||||||| ||| |||||| ||| ||||||||||||    
T  1731662 aggctagaacaaccacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctct 1731740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 428
Target Start/End: Original strand, 23817623 - 23817757
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcat-gaggggagcca-gggggaccacccacatctaggctagagcaactatacaagcgcgag 393  Q
    |||||||||| |||  | ||| ||||||||||||||| |||| ||||||||| | ||||||||  ||||||| |||||||| |||| | || |||  |||    
T  23817623 tacccttcgtcgaatggggctatgataccactgttggatcatcgaggggagctatgggggaccgtccacatcgaggctagaacaaccacactagcaagag 23817722  T
Q  394 aaacgtcacactcttacccaaaactttatggcaat 428  Q
    | ||  |||||||||||||||||| ||| ||||||    
T  23817723 agacaccacactcttacccaaaaccttaaggcaat 23817757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 36629264 - 36629199
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaacact-cccctcaagtgtgagtccatcatttcat 165  Q
    ||||||| ||||||||  |||||||| |||||||||| ||||||||||||||| |||||| |||||    
T  36629264 gatgtgggacatataactcacacttgaacacaacactccccctcaagtgtgagcccatcaattcat 36629199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 41370464 - 41370411
Alignment:
Q  401 acactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||| || |||||    
T  41370464 acactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataa 41370411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 52884914 - 52884856
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaaca---ctcccctcaagtgtgagtcca 156  Q
    ||||||| ||||||||  |||||||||||||||||   |||||||||||||||||||||    
T  52884914 gatgtgggacatataactcacacttgcacacaacaacactcccctcaagtgtgagtcca 52884856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 22028311 - 22028462
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtca-tgaggggagcca-gggggaccacccacatctaggctagagcaactatacaagcgcgag 393  Q
    |||||||||| |||| | |||  |||||||||||||||||| ||||||||||   ||||||||  ||||||  |||||||| ||||   ||||||  |||    
T  22028311 tacccttcgtcgaacggggctccgataccactgttgggtcagtgaggggagctttgggggaccgtccacattgaggctagaacaacctcacaagcaagag 22028410  T
Q  394 aaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    | ||  |||||||||||||||||| ||| | ||||  || ||||||||||||    
T  22028411 agacaccacactcttacccaaaacattaagacaatgagtttatgggtcctct 22028462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 34544295 - 34544249
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatc 365  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  34544295 tgataccaatgttgggtcacgaggggagcca-ggggaccacccacatc 34544249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 3271895 - 3271841
Alignment:
Q  400 cacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||||||||||||||||| ||| |||||||||| ||||||| |||| || |||||    
T  3271895 cacactcttacccaaaaccttaaggcaataggtttatgggttctcttacttataa 3271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 417
Target Start/End: Original strand, 36608636 - 36608726
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    |||||||||| |||||||||  ||||||||  ||||||| |||||||| |||| | || || | |||| ||  ||||||||||||||||||    
T  36608636 tgttgggtcacgaggggagcttgggggaccgtccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaac 36608726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 44620687 - 44620619
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaac---actcc-cctcaagtgtgagtccatcatttcat 165  Q
    ||||||| ||||||||  ||||||||||||||||   ||||| |||||||||||||||||||| |||||    
T  44620687 gatgtgggacatataactcacacttgcacacaacgacactccacctcaagtgtgagtccatcaattcat 44620619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 428
Target Start/End: Original strand, 23556842 - 23556942
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||| | |||||||| | ||| ||||||||| ||  |||| |||||||| | |||||   |||| |||||||||||||| ||||||||||| ||||    
T  23556842 tgttgggttacgaggggagtccgggagaccacccatattcaggc-agagcaaccacacaagtaagagagacgtcacactcttatccaaaactttaaggca 23556940  T
Q  427 at 428  Q
    ||    
T  23556941 at 23556942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 428
Target Start/End: Original strand, 32941130 - 32941199
Alignment:
Q  359 ccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaat 428  Q
    ||||||| |||||||| ||||   ||||||  |||| |||||||||||||||||||||| ||| ||||||    
T  32941130 ccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaat 32941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 428
Target Start/End: Original strand, 39792835 - 39792936
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    ||||| ||||||||||||||   | |||||  ||||||| |||||||| |||| | ||||||  |||| ||  |||||||||||||||||| ||| ||||    
T  39792835 tgttgagtcatgaggggagctcagaggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggca 39792934  T
Q  427 at 428  Q
    ||    
T  39792935 at 39792936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 417
Target Start/End: Complemental strand, 44621189 - 44621093
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    ||||||||||||||| ||||||| |||||   |||||||  ||||||| ||||||||  |||   ||||||  |||||||  ||||||||||||||||||    
T  44621189 tgataccactgttggatcatgagaggagc---ggggaccgtccacatcgaggctagaataaccgcacaagcaagagaaacaccacactcttacccaaaac 44621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 49303014 - 49302969
Alignment:
Q  400 cacactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    |||||||||||||||||| ||| |||||| ||| ||||||||||||    
T  49303014 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctct 49302969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 54936304 - 54936259
Alignment:
Q  400 cacactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    |||||||||||||||||| ||| |||||| ||| ||||||||||||    
T  54936304 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctct 54936259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 417
Target Start/End: Complemental strand, 10246110 - 10246010
Alignment:
Q  318 tgataccactgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaa 416  Q
    |||||||||||||||||||  |||||||||  |||||| |  ||||||| |||||||| |||| | ||||||  | || ||  |||||||||||||||||    
T  10246110 tgataccactgttgggtcagcgaggggagcttgggggagcgtccacatcgaggctagaacaaccagacaagcaagggagacaccacactcttacccaaaa 10246011  T
Q  417 c 417  Q
    |    
T  10246010 c 10246010  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 456
Target Start/End: Complemental strand, 28034389 - 28034281
Alignment:
Q  348 agggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctca 447  Q
    |||||||||| ||||||| || | ||||||||   | ||| | |||| ||| |||||||||||| ||||| |||  |||||| || ||||||| ||||||    
T  28034389 agggggaccatccacatccagaccagagcaaccgcataagtgagagagacgccacactcttacctaaaaccttaaagcaataagtttatgggttctctca 28034290  T
Q  448 catataaag 456  Q
    | |||||||    
T  28034289 cttataaag 28034281  T

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Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16815607 - 16815706
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaattttt 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  16815607 ataataatacctatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggattgtgacatgatccttcactaagtaacaagaaagaaattttt 16815706  T

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Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16854764 - 16854863
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaattttt 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  16854764 ataataatacctatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggattgtgacatgatccttcactaagtaacaagaaagaaattttt 16854863  T

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Target: chr2; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 41678518 - 41678624
Alignment:
Q  119 cacacttgcacacaacactcccct-caagtgtgagtccatcatttcataattctatcccctcaaaccgaagttctttcatccacgagtattttgcgtgta 217  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || || |||||| | |||| ||||| ||||||||||||||||| ||||    
T  41678518 cacacttgcacacaacactccccttcaagtgtgagtccatcaattcataatgctctctcctcaagcggaagctctttaatccacgagtattttgcttgta 41678617  T
Q  218 ccaccgt 224  Q
    || ||||    
T  41678618 ccgccgt 41678624  T

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Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 23009263 - 23009177
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaattt 98  Q
    ||||||||| |||| |||||||||||| |||||||||| ||| |||||| ||||||||||||||||| ||||||||||||| |||||    
T  23009263 tatctaactgcaagagaaatcaaacagagtgcatttaaggtttaggactttgacatgattcgtcacttagtaacaagaaagtaattt 23009177  T

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Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 445
Target Start/End: Complemental strand, 6421944 - 6421794
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    ||||||| || |||||||| || | ||||||| |||||||||||||||||||  ||||||||  ||||||| |||| ||| |||| | |||||   ||||    
T  6421944 taccctttgtcgaaccgaggctctaataccaccgttgggtcatgaggggagctcgggggaccgtccacatcgaggccagaacaaccacacaagttagaga 6421845  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
     ||  |||||||||||||||||| ||| |||||||||| ||||||||||||    
T  6421844 gacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctct 6421794  T

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Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 454
Target Start/End: Complemental strand, 42514861 - 42514703
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    |||||||||| |||| | ||| ||||||||||||||||||| |||||||||  ||||||||  ||||||| |||||||| ||||   |||||   ||||     
T  42514861 tacccttcgtcgaacagggctctgataccactgttgggtcacgaggggagctcgggggaccgtccacatcgaggctagaacaaccccacaagtaagagag 42514762  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||| |||||||||||||||||  ||| ||| || ||| |||||||||||| || |||||    
T  42514761 acgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataa 42514703  T

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Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 465
Target Start/End: Original strand, 41678338 - 41678482
Alignment:
Q  327 tgttgggtcatgaggggagccaggg--ggaccacccacatctaggctagagca-----actatacaagcgcgagaaacgtcacactcttacccaaaactt 419  Q
    |||||| ||||||||||||||||||  ||||||||||||| ||| ||||||||     || ||||||| | |||| |||| |||||||||| |||||| |    
T  41678338 tgttggatcatgaggggagccaggggaggaccacccacatatagactagagcaaccataccatacaagtgagagagacgttacactcttactcaaaacct 41678437  T
Q  420 tatggcaataggtgtatgggtcctctcacatataaagggcttaacc 465  Q
    || ||||| |||| ||||||||||||||| ||||||| | ||||||    
T  41678438 taaggcaa-aggtttatgggtcctctcacttataaagtgtttaacc 41678482  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 308 - 445
Target Start/End: Complemental strand, 23346436 - 23346299
Alignment:
Q  308 aaccgagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactct 407  Q
    ||||| ||| |||||||| ||||||||||||||||||||  ||| ||||  |||||||||||||||| ||||   ||||||  |||| || |||||||||    
T  23346436 aaccgggctctgataccattgttgggtcatgaggggagctcgggcgaccgtccacatctaggctagaacaaccgcacaagcaagagagacatcacactct 23346337  T
Q  408 tacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    |||| ||||| ||| ||| || ||| |||||| |||||    
T  23346336 taccgaaaaccttaaggctatgggtttatgggccctct 23346299  T

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Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 28919044 - 28919112
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    ||||||||||||| |||||||| | ||||||||||||||||  |||| |||||||||||||||||||||    
T  28919044 tatctaactccaattgaaatcagatagggtgcatttaaagtgtaggattgtgacatgattcgtcactaa 28919112  T

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Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 442
Target Start/End: Complemental strand, 37106136 - 37105990
Alignment:
Q  297 acccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    ||||||||| |||||| | || |||||||||||||||||||  ||||||||  ||||||||  ||||||| |||||||| ||||  |||||||  ||||     
T  37106136 acccttcgtcgaaccggggctctgataccactgttgggtcacaaggggagctcgggggaccgtccacatcgaggctagaacaaccgtacaagcaagagag 37106037  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcc 442  Q
    ||  |||||||||||||||||  ||| ||||||  || |||||||||    
T  37106036 acaccacactcttacccaaaatcttaaggcaatgagtttatgggtcc 37105990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 14745634 - 14745771
Alignment:
Q  318 tgataccactgttgggtcatgagggg-agccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaa 416  Q
    ||||||||||||||||||| |||||| |||  |||||||   ||||||| |||||||| |||| | ||  ||  |||| ||| |||||||||||||||||    
T  14745634 tgataccactgttgggtcacgagggggagctcgggggactgtccacatcgaggctagaacaaccacacttgcaagagagacgccacactcttacccaaaa 14745733  T
Q  417 ctttatggcaataggtgtatgggtcctctcacatataa 454  Q
    | ||| |||||| ||| |||||||||||| || |||||    
T  14745734 ccttaaggcaatgggtttatgggtcctcttacttataa 14745771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 28531445 - 28531510
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaacact-cccctcaagtgtgagtccatcatttcat 165  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  28531445 gatgtgggacatataactcacacttgcacacaacactccccctcaagtgtgagtccatcagttcat 28531510  T

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Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 472
Target Start/End: Original strand, 33561429 - 33561573
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    ||||||||||||||||||||| |||| ||| |  | |||||||| |||||||  ||| ||| | |||| |  ||||||||||||||||||| ||| | ||    
T  33561429 tgttgggtcatgaggggagcccgggg-accgcatatatctaggcaagagcaatcataaaagtgagagagatatcacactcttacccaaaaccttaagaca 33561527  T
Q  427 ataggtgtatgggtcctctcacatataaagggcttaacccccactt 472  Q
    ||  || ||||||||||||||| ||||||| | |||||| ||||||    
T  33561528 atgagtttatgggtcctctcacttataaagtgtttaacctccactt 33561573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 25923474 - 25923541
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||||||||||||| ||||| ||| ||| ||| || |||||||||||||||||||||||||||    
T  25923474 tatctaactccaagtgaaattaaacatggttcatgtaa-gtgcaggactgtgacatgattcgtcactaa 25923541  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 455
Target Start/End: Original strand, 29873514 - 29873642
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||| | ||||||||||||| ||||| || ||||| || | |||||||| | ||||| | |||| ||||||||||||||| |||||| ||| ||||    
T  29873514 tgttgggttacgaggggagccaggaggaccgcctacatccagaccagagcaaccacacaagtgagagagacgtcacactcttactcaaaaccttaaggca 29873613  T
Q  427 ataggtgtatgggtcctctcacatataaa 455  Q
    ||  || |||| |||||| ||| ||||||    
T  29873614 atgagtttatgagtcctcccacttataaa 29873642  T

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Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 454
Target Start/End: Complemental strand, 30313367 - 30313231
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    ||||||||||||||||||| |||| ||||| |||||| |  | | ||| |||| |||||||| | ||||| | |||| ||| |||||||||||||||||     
T  30313367 tgataccactgttgggtcacgaggagagcccgggggatcgtcaaaatccaggccagagcaaccacacaagtgagagagacgccacactcttacccaaaat 30313268  T
Q  418 tttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||| ||||||  || | ||||||||||||| |||||    
T  30313267 cttaaggcaatgagtttttgggtcctctcacttataa 30313231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 454
Target Start/End: Original strand, 35580669 - 35580827
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    |||||||||| |||||| | || |||||||| | |||||||||  |||||| ||||||||||  ||||||| |||||||| ||||   |||| |  ||||    
T  35580669 tacccttcgtcgaaccggggctctgataccattattgggtcattgggggagtcagggggaccgtccacatcgaggctagaacaaccccacaaacaagaga 35580768  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||| | |||||||||||||||| ||| |||||| ||| ||| ||||||||||| |||||    
T  35580769 gacgccgcactcttacccaaaaccttaaggcaatgggtttat-ggtcctctcacttataa 35580827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 296 - 454
Target Start/End: Complemental strand, 6421597 - 6421439
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    ||||||| || |||| | ||| ||||||||||||||||||| |||||||||  ||||||||  ||||||| || ||||| ||||   ||||||  ||||     
T  6421597 taccctttgtcgaacggtgctctgataccactgttgggtcacgaggggagctcgggggaccgtccacatcgagactagaacaaccgcacaagcaagagag 6421498  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||  |||||||||||||||||| | | ||||||  || |||| ||||||| || |||||    
T  6421497 acaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataa 6421439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 454
Target Start/End: Original strand, 36178552 - 36178709
Alignment:
Q  297 acccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    ||||||||| |||||| | || |||||||||| |||||||| ||||| |||  |||||| |  ||||||  |||||||| |||| | ||||||  ||||     
T  36178552 acccttcgtcgaaccggggctctgataccactattgggtcacgaggg-agcgcgggggatcgtccacatagaggctagaacaaccacacaagcaagagag 36178650  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||  |||||||||||||||||| ||| |||||| ||| |||||||||||| || |||||    
T  36178651 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataa 36178709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 30312980 - 30312919
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaac 379  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||  |||| ||||||||    
T  30312980 tgataccactgttgggtcacgaggggagctcgggggaccacccacattcaggccagagcaac 30312919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 453
Target Start/End: Original strand, 33953817 - 33953874
Alignment:
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatata 453  Q
    ||||||||||||||||||||| |||| ||||| |||| ||||||||||||||| ||||    
T  33953817 acgtcacactcttacccaaaattttaaggcaacaggtttatgggtcctctcacttata 33953874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 6422291 - 6422173
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||||||| |||||  |||||||||   ||||||| |||||||| |||| | ||||||  |||| ||  |||||||||||| ||||| ||| |||     
T  6422291 tgttgggtcatggggggaatcagggggacagtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaaggct 6422192  T
Q  427 ataggtgtatgggtcctct 445  Q
    || ||| ||||||||||||    
T  6422191 atgggtttatgggtcctct 6422173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 30323492 - 30323424
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaacactc---ccctcaagtgtgagtccatcatttcat 165  Q
    |||| ||| |||||||| |||||||||||||||||| ||   ||||||||||||||||||||| |||||    
T  30323492 tgatttgggacatataacacacacttgcacacaacaatctccccctcaagtgtgagtccatcaattcat 30323424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 33561581 - 33561647
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaacactcccc-tcaagtgtgagtccatcatttcat 165  Q
    |||||||||||||||||  ||||||||||||||||| ||||| ||||||| | |||||||| |||||    
T  33561581 tgatgtggaacatataactcacacttgcacacaacattccccatcaagtgcgtgtccatcaattcat 33561647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 454
Target Start/End: Original strand, 41283449 - 41283579
Alignment:
Q  325 actgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatg 423  Q
    |||||||||| | ||||||||||  ||||||||  ||||||| |||||||| |||| | |||| |  |||| ||| |||||||||||| ||||| ||| |    
T  41283449 actgttgggtaagtgaggggagcatgggggaccgtccacatcaaggctagaacaaccacacaaacaagagagacgccacactcttacctaaaaccttaag 41283548  T
Q  424 gcaataggtgtatgggtcctctcacatataa 454  Q
    |||||  || |||||||||||| || |||||    
T  41283549 gcaatgagtttatgggtcctcttacttataa 41283579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 454
Target Start/End: Complemental strand, 962808 - 962652
Alignment:
Q  297 acccttcgtggaaccgagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaa 396  Q
    ||||||| | |||||| ||| | |||| |||||||| ||||| ||||||   ||| ||||  ||||||| |||||||| |||| | ||||||  |||  |    
T  962808 acccttcatcgaaccgggctctaatactactgttggatcatg-ggggagttcgggagaccgtccacatcgaggctagaacaaccacacaagcaagagtga 962710  T
Q  397 cgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |  |||||||||||||||||| ||| | |||| ||| ||||||||||||||| |||||    
T  962709 caacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataa 962652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 7598637 - 7598577
Alignment:
Q  100 tgatgtggaacatataagacacacttgcaca-caacactccc-ctcaagtgtgagtccatc 158  Q
    |||||||| ||||||||  |||||||||||| |||||||||| ||||||||||||||||||    
T  7598637 tgatgtgggacatataactcacacttgcacaccaacactccctctcaagtgtgagtccatc 7598577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 5542602 - 5542729
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||| ||||| |||||||  ||||||||  ||||||| || || || ||||   ||||||  |||| ||  |||||||||||| ||||| ||| ||||    
T  5542602 tgttggatcatggggggagctcgggggaccgtccacatcgagacttgaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggca 5542701  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    |||||| |||||||||||| || |||||    
T  5542702 ataggtttatgggtcctcttacttataa 5542729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 15880380 - 15880317
Alignment:
Q  391 gagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||| ||| |||||||||||||||||| ||| |||||| ||| |||||||||||| || |||||    
T  15880380 gagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataa 15880317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 30313197 - 30313104
Alignment:
Q  109 acatataagacacacttgcacacaacactc---ccctcaagtgtgagtccatcatttcataattctatcccctcaaaccgaagttctttcatcc 199  Q
    |||||||| |||| ||||||||||||| ||   |||||||||||||||||| || ||||| || ||  |||||||| | |||| ||||||||||    
T  30313197 acatataacacacgcttgcacacaacaatcttcccctcaagtgtgagtccaacaattcatcatgctcacccctcaagcggaagctctttcatcc 30313104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 40679768 - 40679818
Alignment:
Q  109 acatataagacacacttgcacacaacact-cccctcaagtgtgagtccatc 158  Q
    ||||||||  |||| |||||||||||||| |||||||||||||||||||||    
T  40679768 acatataactcacatttgcacacaacactccccctcaagtgtgagtccatc 40679818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 454
Target Start/End: Complemental strand, 40733677 - 40733571
Alignment:
Q  348 agggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctca 447  Q
    |||||||||| ||||||| || || || | || | ||||||| |||| ||  |||||||||||||||||||||| ||   ||||| |||||||||||| |    
T  40733677 agggggaccatccacatcgagacttgaactaccacacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctctta 40733578  T
Q  448 catataa 454  Q
    | |||||    
T  40733577 cttataa 40733571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 3673111 - 3673044
Alignment:
Q  102 atgtggaacatataagacacacttgcacacaaca---ctcc-cctcaagtgtgagtccatcatttcat 165  Q
    |||||| ||||||||  |||||||||||||||||   |||| |||||||||||||||||||| |||||    
T  3673111 atgtgggacatataactcacacttgcacacaacaacactcctcctcaagtgtgagtccatcaattcat 3673044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 444
Target Start/End: Original strand, 14745335 - 14745388
Alignment:
Q  391 gagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctc 444  Q
    |||| ||| |||||||||||||||||| ||| |||||| ||| |||||||||||    
T  14745335 gagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctc 14745388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 29873667 - 29873729
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaacactc---ccctcaagtgtgagtccatca 159  Q
    |||||||| |||| ||| |||| ||||||||||||| ||   |||||||||||||||||||||    
T  29873667 tgatgtgggacatgtaacacacccttgcacacaacaatctccccctcaagtgtgagtccatca 29873729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 444
Target Start/End: Original strand, 29874021 - 29874117
Alignment:
Q  348 agggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctc 444  Q
    ||||||||| |||||||| |||| | ||||||   ||||| | || | ||| |||||||||| ||||||| ||| |||||| ||| |||||||||||    
T  29874021 agggggaccgcccacatccaggccaaagcaaccgcacaagtgggatagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtcctc 29874117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 6e-32; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 318 - 456
Target Start/End: Original strand, 1085584 - 1085722
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| |||| | |||||   |||| ||| ||||||||||||||||||    
T  1085584 tgataccactgttgggtcatgaggggagccagggggaccgtccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaac 1085683  T
Q  418 tttatggcaataggtgtatgggtcctctcacatataaag 456  Q
     ||| |||||| ||| |||||||||||| || |||||||    
T  1085684 cttaaggcaatgggtttatgggtcctcttacttataaag 1085722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 8316309 - 8316226
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaa 95  Q
    |||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||| || |||||||||||||||||||    
T  8316309 tatctaactccaagagaaatcaaacaagatgcatttaaggttcaggactgtgacatgattcctcgctaagtaacaagaaagaaa 8316226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4986005 - 4985919
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaa 87  Q
    |||||||||| ||| |||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  4986005 ataataatacctatataactcaaagtgaaatcatataggatgcatttaaagttcaggactgtgacatgattcatcactaagtaacaa 4985919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4990103 - 4990017
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaa 87  Q
    |||||||||| ||| |||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  4990103 ataataatacctatataactcaaagtgaaatcatataggatgcatttaaagttcaggactgtgacatgattcatcactaagtaacaa 4990017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19202292 - 19202371
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||||||||  |||| |||||||||||||||| ||||    
T  19202292 ataataatacctatctaactgcaagtgaaatcaagcagggtgcatttaaagtgtaggaatgtgacatgattcgtcgctaa 19202371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 454
Target Start/End: Complemental strand, 7517751 - 7517634
Alignment:
Q  337 tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtat 436  Q
    |||||||||||| |||||||||||||||| |||||||| |||| | ||||| | || | ||  |||||||||||||||||| ||| |||||| ||| |||    
T  7517751 tgaggggagccaaggggaccacccacatcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttat 7517652  T
Q  437 gggtcctctcacatataa 454  Q
    ||||||||| || |||||    
T  7517651 gggtcctcttacttataa 7517634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 12389378 - 12389474
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaattttt 100  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||    |||||||||||||||||||| ||  |||||||||||||||    
T  12389378 ataataatatatatctgactccaagtgaaatcaaacagggtgcatttaaagtgtagtttagtgacatgattcgtcactaa-ta--aagaaagaaattttt 12389474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 454
Target Start/End: Original strand, 37533310 - 37533468
Alignment:
Q  297 acccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    ||||||||| |||||| | || ||||||||||||||||||| |||||||||  ||||||||  ||||||| |||||||| ||||   ||||||   |||     
T  37533310 acccttcgtcgaaccggggctctgataccactgttgggtcacgaggggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagag 37533409  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||  |||||||||||||||||| ||| |||||| | | |||||||||||| || |||||    
T  37533410 acaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataa 37533468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 351 - 472
Target Start/End: Complemental strand, 37346074 - 37345954
Alignment:
Q  351 gggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacat 450  Q
    ||||||| ||||||| |||  ||||||||| |||||| | |||| ||||||||||||||| |||||||||| ||||||| || |||||||| |||||| |    
T  37346074 gggaccatccacatccagga-agagcaactgtacaagtgagagagacgtcacactcttactcaaaactttaaggcaatatgtttatgggtcttctcactt 37345976  T
Q  451 ataaagggcttaacccccactt 472  Q
    |||||  | |||||| ||||||    
T  37345975 ataaaatgtttaacctccactt 37345954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 20578302 - 20578377
Alignment:
Q  4 ataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| | |||| |||||||||||| ||||||||||||||    
T  20578302 ataatacctatctaactccaagtgaaatcaaacaaggttcatgt-aagtgcaggactgtgacgtgattcgtcactaa 20578377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 429
Target Start/End: Complemental strand, 37345771 - 37345660
Alignment:
Q  318 tgataccactgttgggtcatga-ggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaa 416  Q
    ||||||||||||||||||| || |||||||| || ||||||| |||||| |||| ||||||||  |||||| | |||| |||||| ||||||||| ||||    
T  37345771 tgataccactgttgggtcaagagggggagcccggcggaccactcacatccaggc-agagcaaccgtacaagtgagagagacgtcagactcttaccaaaaa 37345673  T
Q  417 ctttatggcaata 429  Q
    | ||| |||||||    
T  37345672 ccttaaggcaata 37345660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39269512 - 39269434
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||| | ||||||||||||||| ||||||||||| |||||| | ||||  |||||||||||| |||||||||||||    
T  39269512 ataataattcctatctaactccaagtaaaatcaaacagtgtgcatgt-aagtgtaggactgtgacacgattcgtcactaa 39269434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 454
Target Start/End: Complemental strand, 30244449 - 30244324
Alignment:
Q  329 ttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaat 428  Q
    ||||||||  ||||||||  ||||||||| ||||||| ||||| || |||| | ||||| | |||| ||  |||||||||||||||||| ||| ||||||    
T  30244449 ttgggtcacaaggggagctcgggggaccatccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaat 30244350  T
Q  429 aggtgtatgggtcctctcacatataa 454  Q
     ||| |||| ||||||| || |||||    
T  30244349 gggtttatgagtcctcttacttataa 30244324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 45433411 - 45433295
Alignment:
Q  338 gaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatg 437  Q
    |||||||||||||||||||  ||||||| |||||||| ||||   ||||||  |||| ||  |||||||||||||||||  ||| |||||||||| ||||    
T  45433411 gaggggagccagggggaccgaccacatcgaggctagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttatg 45433312  T
Q  438 ggtcctctcacatataa 454  Q
     || |||| || |||||    
T  45433311 agttctcttacttataa 45433295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 454
Target Start/End: Complemental strand, 6054745 - 6054614
Alignment:
Q  323 ccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttat 422  Q
    ||||||||||||||   || ||||  ||||||||  ||||||| |||||||| |||| |||||||   |||| ||  |||||||||||||||||| |||     
T  6054745 ccactgttgggtcagtcggagagctcgggggaccgtccacatcaaggctagaacaaccatacaagtaggagagacaccacactcttacccaaaaccttaa 6054646  T
Q  423 ggcaataggtgtatgggtcctctcacatataa 454  Q
    ||||||  || |||||||||||| || |||||    
T  6054645 ggcaatgtgtttatgggtcctcttacttataa 6054614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 454
Target Start/End: Original strand, 34218043 - 34218138
Alignment:
Q  359 ccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||||||| ||||| || |||| ||||||||| |||| ||  |||||||||||||||||| ||| | |||| ||| |||| |||||||||| |||||    
T  34218043 ccacatcgaggcttgaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataa 34218138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 23427 - 23481
Alignment:
Q  400 cacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||| || |||||    
T  23427 cacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataa 23481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 5107695 - 5107744
Alignment:
Q  50 agttcaggactgtgacatgattcgtcactaagtaacaagaaagaaatttt 99  Q
    |||| |||| |||||||||||||||||||||||||||  |||||||||||    
T  5107695 agttaaggaatgtgacatgattcgtcactaagtaacagaaaagaaatttt 5107744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 13252022 - 13251950
Alignment:
Q  7 atacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||| |||||||||||||||||||||||| ||||| ||| | | || ||||||||||||||||| | |||||||    
T  13252022 atacctatctaactccaagtgaaatcaaatagggttcatgt-acgtgcaggactgtgacatgatacatcactaa 13251950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 371
Target Start/End: Complemental strand, 30244546 - 30244489
Alignment:
Q  314 gctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggct 371  Q
    |||||||||||| ||||||||||||||||||||| | ||||||  ||||||| |||||    
T  30244546 gctttgataccattgttgggtcatgaggggagcctgagggaccgtccacatcgaggct 30244489  T

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Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 454
Target Start/End: Complemental strand, 45434803 - 45434690
Alignment:
Q  341 gggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggt 440  Q
    |||||| |||||||||   |||||| |||||||| |||||  |||||   |||| || ||||||||||||||||||| ||| |||| || || |||||||    
T  45434803 gggagcgagggggaccgatcacatcgaggctagaacaactccacaagtaagagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggt 45434704  T
Q  441 cctctcacatataa 454  Q
    ||||| || |||||    
T  45434703 cctcttacttataa 45434690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 37345925 - 37345878
Alignment:
Q  119 cacacttgcacacaacactcccc-tcaagtgtgagtccatcatttcat 165  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  37345925 cacacttgcacacaacactccccttcaagtgtgagttcatcaattcat 37345878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 40094524 - 40094583
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaacactcc-cctcaagtgtgagtccatc 158  Q
    |||||| | ||||||||  ||||||||||||||||||||| ||| |||||||||||||||    
T  40094524 tgatgttggacatataactcacacttgcacacaacactcctcctaaagtgtgagtccatc 40094583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 7518028 - 7517982
Alignment:
Q  327 tgttgggtca-tgaggggagccagggggaccacccacatctaggcta 372  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||    
T  7518028 tgttgggtcactgaggggagccaaggggaccacccacatcgaggcta 7517982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 7554052 - 7553984
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaaca---ctcccc-tcaagtgtgagtccatcatttcat 165  Q
    ||||||| ||||||||  |||||||||||||||||   |||||| |||||||||||||||||| |||||    
T  7554052 gatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcaattcat 7553984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 22566712 - 22566766
Alignment:
Q  400 cacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||||||||||||||||| ||| |||||| ||| |||||||||||| || |||||    
T  22566712 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataa 22566766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 454
Target Start/End: Complemental strand, 29157749 - 29157619
Alignment:
Q  325 actgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatg 423  Q
    |||||||||||| ||||| ||| | ||| ||||  ||||||| || |||||||||||| || |||  |||| ||  |||||||||||||||||| ||| |    
T  29157749 actgttgggtcagtgaggagagtctgggagaccgtccacatcaagactagagcaactacacgagcaagagagacaccacactcttacccaaaaccttaag 29157650  T
Q  424 gcaataggtgtatgggtcctctcacatataa 454  Q
    ||||| | | |||||||| ||| || |||||    
T  29157649 gcaatggatttatgggtcgtcttacttataa 29157619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 7517839 - 7517786
Alignment:
Q  327 tgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaac 379  Q
    |||||||||| |||||||||||| |||||||||||| ||| |||||||| ||||    
T  7517839 tgttgggtcactgaggggagccaaggggaccacccatatcgaggctagaacaac 7517786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 7518105 - 7518052
Alignment:
Q  327 tgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaac 379  Q
    |||||||||| |||||||||||| |||||||||||| ||| |||||||| ||||    
T  7518105 tgttgggtcactgaggggagccaaggggaccacccatatcgaggctagaacaac 7518052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 22567006 - 22567143
Alignment:
Q  318 tgataccactgttgggtcat-gaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaa 416  Q
    |||||||||| ||||||| | |||||||||  ||||||||| ||||||| ||||  || ||||   ||||||  |||| ||  |||||||||||| ||||    
T  22567006 tgataccactattgggtcgttgaggggagctcgggggaccatccacatcgaggcccgaacaaccccacaagcaagagagacaccacactcttaccaaaaa 22567105  T
Q  417 ctttatggcaataggtgtatgggtcctctcacatataa 454  Q
    | ||| ||||||  || |||||||||||| || |||||    
T  22567106 ccttaaggcaatgagtttatgggtcctcttacttataa 22567143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 30253760 - 30253723
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggac 355  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  30253760 tgataccattgttgggtcatgaggggagcctgggggac 30253723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 454
Target Start/End: Original strand, 40094773 - 40094878
Alignment:
Q  349 gggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcac 448  Q
    ||||||||  ||||||| |||||||| ||||   ||||||  |||| ||| |||||||||||||||||| ||| | | || ||| |||||||||||| ||    
T  40094773 gggggaccgaccacatcgaggctagaacaacctcacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttac 40094872  T
Q  449 atataa 454  Q
     |||||    
T  40094873 ttataa 40094878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 427
Target Start/End: Complemental strand, 47129550 - 47129450
Alignment:
Q  326 ctgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggc 425  Q
    |||||||||||||||||||| |  |||||||  ||||||| |||||||| ||||   ||||||  |||| ||  |||||||||||||||||| ||| |||    
T  47129550 ctgttgggtcatgaggggag-ctcggggaccgtccacatcgaggctagatcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggc 47129452  T
Q  426 aa 427  Q
    ||    
T  47129451 aa 47129450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 454
Target Start/End: Complemental strand, 11845373 - 11845245
Alignment:
Q  326 ctgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggc 425  Q
    |||||||||||   |||||||  ||||||||  | ||||| |||||||| |||||  ||||||  |||| ||  |||||||||| ||||||| ||| |||    
T  11845373 ctgttgggtcactgggggagcacgggggaccgtctacatcgaggctagaacaactgcacaagcaagagagacaccacactcttatccaaaaccttaaggc 11845274  T
Q  426 aataggtgtatgggtcctctcacatataa 454  Q
    ||| | | |||||||||||| || |||||    
T  11845273 aatggatttatgggtcctcttacttataa 11845245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 30032753 - 30032637
Alignment:
Q  323 ccactgttgggtcatgagggg-agccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaacttta 421  Q
    ||||| |||||||| |||||| |||  ||||||||  ||||||| ||| |||| ||||   ||||||  |||| | |||||||||||||||||||| |||    
T  30032753 ccactattgggtcacgagggggagctcgggggaccgtccacatcgaggatagaacaaccgcacaagcaagagagatgtcacactcttacccaaaacctta 30032654  T
Q  422 tggcaataggtgtatgg 438  Q
     ||| |||||| |||||    
T  30032653 aggctataggtttatgg 30032637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 6e-32; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 34489723 - 34489809
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaattt 98  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||    
T  34489723 tatctaactccaagagaaatcaaacagggtgcatttaaggtttaggactgtgacatgattcgtcacttagtaacaagaaagaaattt 34489809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31213335 - 31213417
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagta 83  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  31213335 ataacaatacatatctaacttcaagtgaaatcaaacagggtgcatttaaagttcaggattgtgacatgattcatcactaagta 31213417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25405337 - 25405264
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgt 74  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  25405337 ataataatacatatctaactccaagtgaaatcaaatagggtgcatttaaagtgtaggactgtgacatgattcgt 25405264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9834315 - 9834394
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||||||| |||||    
T  9834315 ataataatacctatctaactccaagtgaaatcaaacagggtgcatttaaattgtaggaatgtgacatgattcgtaactaa 9834394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 445
Target Start/End: Complemental strand, 32487583 - 32487456
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    ||||||||  ||||||||||| ||| |||  ||||||||| ||||||| |||||||| |||| | | ||||  |||| ||||||||||||||||||||||    
T  32487583 tgataccagagttgggtcatgggggaagcttgggggaccatccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaac 32487484  T
Q  418 tttatggcaataggtgtatgggtcctct 445  Q
     ||| |||||| ||| ||||||||||||    
T  32487483 cttaaggcaatgggtttatgggtcctct 32487456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19053946 - 19054025
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    ||||||||||||||||| |||||||  |||||||| || |||||||||||||  ||||||||||||| ||||||||||||    
T  19053946 ataataatacatatctacctccaagcaaaatcaaatagagtgcatttaaagtgtaggactgtgacatcattcgtcactaa 19054025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 326 - 456
Target Start/End: Original strand, 1028492 - 1028623
Alignment:
Q  326 ctgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatgg 424  Q
    ||||||||||| |||||||||| |||||||||  ||||||| |||||||| ||||   ||||| | |||| ||| |||||||||||| ||||| ||| ||    
T  1028492 ctgttgggtcactgaggggagctagggggaccgtccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaagg 1028591  T
Q  425 caataggtgtatgggtcctctcacatataaag 456  Q
      |||||| |||||||||||| || |||||||    
T  1028592 ttataggtttatgggtcctcttacttataaag 1028623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 297 - 454
Target Start/End: Complemental strand, 6500663 - 6500504
Alignment:
Q  297 acccttcgtggaaccg-agctttgataccactgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    ||||||||| |||||| | || ||||||||||||||||| | ||||||||||| ||||||||  ||||||| |||||||| ||||   ||||||  ||||    
T  6500663 acccttcgtcgaaccggaactctgataccactgttgggtaagtgaggggagcctgggggaccgtccacatcgaggctagaacaaccgcacaagcaagaga 6500564  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||  |||||||||||||||||| ||| |||||| ||| ||  |||||||| || |||||    
T  6500563 gacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataa 6500504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 27502013 - 27502140
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||||||||||||||| |||||||||  ||||||| ||| |||| |||| | ||||||  |||| ||  |||||| ||||| ||||  ||| ||||    
T  27502013 tgttgggtcatgaggggagctagggggaccgtccacatcgaggatagaacaaccacacaagcaagagagacaccacacttttaccaaaaatcttaaggca 27502112  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    |||||| |||||||||||| || |||||    
T  27502113 ataggtttatgggtcctcttacttataa 27502140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 18603097 - 18603224
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||| | ||||||||||||| | |||  ||||||| |||||||| | || | ||||||  |||| | | |||||||||||||||||| ||| ||||    
T  18603097 tgttgggttacgaggggagccaggagaaccgtccacatcgaggctagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaaggca 18603196  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    || ||| |||||||||||| || |||||    
T  18603197 atgggtttatgggtcctcttacttataa 18603224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 40296292 - 40296419
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    ||||||||||||||||  ||| ||||||||  ||||||| |||||||| ||||   ||||||  |||| ||  |||||||||||||||||| | | ||||    
T  40296292 tgttgggtcatgagggaggcctgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggca 40296391  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    || ||| |||||||||||| || |||||    
T  40296392 atgggtttatgggtcctcttacttataa 40296419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 454
Target Start/End: Original strand, 3295323 - 3295448
Alignment:
Q  328 gttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaa 427  Q
    ||||| ||||||||||||  |||||||||  ||||||| |||||||| |||| | ||||||  |||| ||  |||||||||| ||||||| ||| |||||    
T  3295323 gttggatcatgaggggagtgagggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaacacactctta-ccaaaaccttaaggcaa 3295421  T
Q  428 taggtgtatgggtcctctcacatataa 454  Q
    | ||| |||||||||||| || |||||    
T  3295422 ttggtttatgggtcctcttacttataa 3295448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 24489334 - 24489400
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaacact-cccctcaagtgtgagtccatcatttcat 165  Q
    |||||||| ||||||||  |||||||| |||||||||| |||||||||||||||||||||| |||||    
T  24489334 tgatgtgggacatataactcacacttgaacacaacactccccctcaagtgtgagtccatcaattcat 24489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 321 - 454
Target Start/End: Complemental strand, 25328123 - 25327989
Alignment:
Q  321 taccactgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactt 419  Q
    |||||||||||||||| ||||||||||  ||||||||  ||||||  |||||||| |||| | ||  ||  |||| ||  |||||||||||||||||| |    
T  25328123 taccactgttgggtcactgaggggagctcgggggaccgtccacattgaggctagaacaaccacacttgcaagagagacaccacactcttacccaaaacct 25328024  T
Q  420 tatggcaataggtgtatgggtcctctcacatataa 454  Q
    || |||| ||||| |||||||||||| || |||||    
T  25328023 taaggcattaggtttatgggtcctcttacttataa 25327989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 36522026 - 36522092
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaacactc-ccctcaagtgtgagtccatcatttcat 165  Q
    |||||||| ||||||||  ||||||||| |||||||||| ||||||||||||||||||||| |||||    
T  36522026 tgatgtgggacatataactcacacttgcgcacaacactctccctcaagtgtgagtccatcaattcat 36522092  T

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Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 419
Target Start/End: Original strand, 3622858 - 3622958
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    |||||||| |||||||||||||||| ||||  |||||||||||||||| |||| || ||||| | || || |  ||| |||||||||||||||| |||||    
T  3622858 tgataccattgttgggtcatgagggaagccctggggaccacccacatccaggc-agggcaaccacactagtgacagagacgtcacactcttacctaaaac 3622956  T
Q  418 tt 419  Q
    ||    
T  3622957 tt 3622958  T

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Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 31599338 - 31599257
Alignment:
Q  3 aataatacatatctaactccaagtgaaatcaaacaggg-tgcatttaaagttcaggactgtgacatgattcgtcactaagta 83  Q
    |||||| | |||||||||| ||| |||||||||||||| | ||| ||| |||||||||| ||||||||||||| ||||||||    
T  31599338 aataatccctatctaactctaagagaaatcaaacaggggtacatataacgttcaggactatgacatgattcgttactaagta 31599257  T

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Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 13415738 - 13415864
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    ||||||||||  |||||||||| ||||||| || |  || |||||||| ||||   ||||||  |||| ||| |||||||||||||||||| ||| || |    
T  13415738 tgttgggtcaccaggggagccacggggaccgcc-atttcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggta 13415836  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    |||||| |||||||||||| || |||||    
T  13415837 ataggtttatgggtcctcttacttataa 13415864  T

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Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 454
Target Start/End: Complemental strand, 26074769 - 26074666
Alignment:
Q  351 gggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacat 450  Q
    |||| |||||||||| ||| ||||||||| | || || | |||| ||  |||||||||||||||||| ||| |||||| ||| |||||||||||| || |    
T  26074769 gggatcacccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 26074670  T
Q  451 ataa 454  Q
    ||||    
T  26074669 ataa 26074666  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 13415891 - 13415951
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaaca---ctcccctcaagtgtgagtccatc 158  Q
    ||||||| ||||||||  |||||||||||||||||   |||||||||||||||||||||||    
T  13415891 gatgtgggacatataactcacacttgcacacaacagcactcccctcaagtgtgagtccatc 13415951  T

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Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 452
Target Start/End: Original strand, 26074146 - 26074248
Alignment:
Q  350 ggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcaca 449  Q
    ||||| |||||||||| ||| ||||||||| | || || | |||| ||  |||||||||||||||||| ||| |||||| |||  ||||||||||| |||    
T  26074146 ggggatcacccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttaca 26074245  T
Q  450 tat 452  Q
    |||    
T  26074246 tat 26074248  T

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Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 31509642 - 31509550
Alignment:
Q  109 acatataagacacacttgcacacaacactc---ccctcaagtgtgagtccatcatttcataattctatcccctcaaaccgaagttctttcatc 198  Q
    ||||||||  ||||||||||||||||| ||   ||||||||||||||||||||| ||||| || ||  |||||||| | |||| |||||||||    
T  31509642 acatataactcacacttgcacacaacaatctctccctcaagtgtgagtccatcaattcatcatgctcacccctcaagcggaagctctttcatc 31509550  T

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Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 472
Target Start/End: Complemental strand, 31509912 - 31509767
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacc-caaaactttatggc 425  Q
    |||||||||| |||| ||||||||||||||||||||||| | || || |||||  |||||||| |||| ||  |||| |||||||  ||||| | | |||    
T  31509912 tgttgggtcacgaggagagccagggggaccacccacatccatgc-agggcaaccgtacaagcgagagagacaccacattcttaccaaaaaacctcaaggc 31509814  T
Q  426 aataggtgtatgggtcctctcacatataaagggcttaacccccactt 472  Q
    |||  || |||| |||||||||| ||||||| ||| |||| ||||||    
T  31509813 aatgagtttatgagtcctctcacttataaagtgctcaacctccactt 31509767  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 454
Target Start/End: Original strand, 34753001 - 34753129
Alignment:
Q  325 actgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatgg 424  Q
    |||||||||||||| |||||||  |||  |||  ||||||| |||||||| ||||   ||||||  |||| ||| |||||||||||||||||| ||| ||    
T  34753001 actgttgggtcatg-ggggagcttgggaaaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagg 34753099  T
Q  425 caataggtgtatgggtcctctcacatataa 454  Q
    |||| ||| |||||||| ||| || |||||    
T  34753100 caatcggtttatgggtcttcttacttataa 34753129  T

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Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 20547675 - 20547609
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||||| ||||||| ||||||||| ||| ||  || |||||||||||||||||||||||||||    
T  20547675 tatctaactcca-gtgaaattaaacagggttcatgtat-gtacaggactgtgacatgattcgtcactaa 20547609  T

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Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 15370583 - 15370456
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    ||||||| ||||||||||||  || |||||  ||||||| |||||||| ||||   |||| |  |||| ||| ||||||||||| |||||| ||| |||     
T  15370583 tgttgggacatgaggggagcatggaggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccacactcttacgcaaaaccttaaggct 15370484  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    || ||| |||||||||||| || |||||    
T  15370483 atgggtttatgggtcctcttacttataa 15370456  T

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Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 447
Target Start/End: Original strand, 36521946 - 36521993
Alignment:
Q  400 cacactcttacccaaaactttatggcaataggtgtatgggtcctctca 447  Q
    |||||||||||||||||| ||| |||||| ||| ||||||||||||||    
T  36521946 cacactcttacccaaaaccttaaggcaattggtttatgggtcctctca 36521993  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 454
Target Start/End: Complemental strand, 41170775 - 41170688
Alignment:
Q  367 aggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||||||| |||| | ||||||  || ||||  |||||||||||||||||| ||| |||||| ||| |||||||||||| || |||||    
T  41170775 aggctagaacaaccacacaagcaagaaaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataa 41170688  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 36527048 - 36527110
Alignment:
Q  307 gaaccgagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctagg 369  Q
    |||||| ||| |||||||| |||||||||| || ||||||| || ||| ||||||||||||||    
T  36527048 gaaccgggctctgataccattgttgggtcacgaagggagcccggtggatcacccacatctagg 36527110  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 26074285 - 26074330
Alignment:
Q  109 acatataagacacacttgcacacaacact-cccctcaagtgtgagt 153  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||    
T  26074285 acatataactcacacttgcacacaacactccccctcaagtgtgagt 26074330  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 36568545 - 36568671
Alignment:
Q  327 tgttgggtcat-gaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggc 425  Q
    ||||||||||| |||||||||  ||||||||  ||||||| ||| |||| |||| | ||||| | ||||  || |||||||||||| ||||| ||| |||    
T  36568545 tgttgggtcattgaggggagctcgggggaccttccacatcgaggatagaacaaccacacaagagagaga--cgccacactcttaccaaaaaccttaaggc 36568642  T
Q  426 aataggtgtatgggtcctctcacatataa 454  Q
    ||| ||| || ||||| |||||| |||||    
T  36568643 aatgggtttacgggtcatctcacttataa 36568671  T

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Target: chr3 (Bit Score: 71; Significance: 6e-32; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12770494 - 12770397
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaatttt 99  Q
    |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  12770494 ataataatacctatctatctccaagtgaaatcaaacagggtgcattgaaagttcaggactgtgacacgattcgtcactaagtaa-atgaaagaaatttt 12770397  T

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Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 295 - 454
Target Start/End: Original strand, 41359709 - 41359869
Alignment:
Q  295 ttacccttcgtggaaccgagctttgataccactgttgggtcatgaggggagc-cagggggaccacccacatctaggctagagcaactatacaagcgcgag 393  Q
    ||||||||||| |||  | ||| |||||||||| ||||||||   ||||||| | |||||||| |||||||| |||||||| |||| | ||||||| |||    
T  41359709 ttacccttcgtcgaatggggctatgataccactattgggtcactgggggagctcggggggaccgcccacatcgaggctagaacaaccacacaagcgagag 41359808  T
Q  394 aaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    | ||| |||| ||||||||||||| ||| |||||| ||| |||||||||||| || |||||    
T  41359809 agacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataa 41359869  T

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Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34275753 - 34275672
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaa--gttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||  ||  ||||||||||||||||||||||||||    
T  34275753 ataataatacctatctaactccaagtgaaatcgaacagagtgcatttaaagtgtagaggactgtgacatgattcgtcactaa 34275672  T

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Target: chr3; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 19166589 - 19166517
Alignment:
Q  4 ataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtca 76  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||  |||| ||| |||||||||||||    
T  19166589 ataatacctatctaactccaagtgaaatcaaacaggatgcatttaaagtgtaggaatgttacatgattcgtca 19166517  T

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Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 16226153 - 16226236
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaa 95  Q
    |||||||||||||| ||| ||||||||||| ||| ||| |||||||| |||| ||||||||||||||||||||||  |||||||    
T  16226153 tatctaactccaagagaagtcaaacagggtacatataaggttcaggattgtggcatgattcgtcactaagtaacagaaaagaaa 16226236  T

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Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 8771386 - 8771458
Alignment:
Q  7 atacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||| |||||||||||||||||||||||||||||| ||| |||| | |||| ||||||||||||||||||||||    
T  8771386 atacctatctaactccaagtgaaatcaaacagggttcatgtaaa-tgcagggctgtgacatgattcgtcactaa 8771458  T

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Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 453
Target Start/End: Original strand, 47964521 - 47964621
Alignment:
Q  352 ggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacata 451  Q
    |||||||||||||| ||| | ||||||| | ||||| | |||| ||| |||||||||||||||||| ||| |||||||||| ||||||||||||||| ||    
T  47964521 ggaccacccacatcaagg-tggagcaaccacacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcactta 47964619  T
Q  452 ta 453  Q
    ||    
T  47964620 ta 47964621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 454
Target Start/End: Original strand, 42342360 - 42342492
Alignment:
Q  323 ccactgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaacttta 421  Q
    |||||||||||||| | ||||||||||||||||||  ||||||  |||||||| ||||   ||||||  |||| |||||||||||||||||||||| |||    
T  42342360 ccactgttgggtcactaaggggagccagggggaccgtccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaacctta 42342459  T
Q  422 tggcaataggtgtatgggtcctctcacatataa 454  Q
     | |||| | | |||||||||||| || |||||    
T  42342460 agacaatggatttatgggtcctcttacttataa 42342492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 54017784 - 54017920
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    |||||||||||||||||||   ||||||||||||||||| |||||||| | |||||| |||| | |||||   |||| ||  ||||||||||||||||||    
T  54017784 tgataccactgttgggtcactgggggagccagggggaccgcccacatcgaagctagaacaaccacacaagtaagagagacaccacactcttacccaaaac 54017883  T
Q  418 tttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||| |||  ||||| |||| ||||||| || |||||    
T  54017884 cttaaggcgttaggtttatgagtcctcttacttataa 54017920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8766497 - 8766575
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||| |||| | |||| | ||||||||||||||||||||    
T  8766497 ataaaaatacctatctaactccaagtgaaatcaaacagggttcatgtaaa-tgcagggccgtgacatgattcgtcactaa 8766575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19913401 - 19913479
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| || || | ||||||||||||||||||  |||||||    
T  19913401 ataataatacacatctaacttcaagtgaaatcaaacagggtgca-ttgaattgcaggactgtgacatgatttatcactaa 19913479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 32589884 - 32589757
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||| |||||| |||||| |||||||||  ||||||| || ||||| |||| | ||||||  |||| || || |||||||||||||||| ||| ||||    
T  32589884 tgttggatcatgaagggagcgagggggaccgtccacatcgagcctagaacaaccacacaagcaagagagacatcgcactcttacccaaaaccttaaggca 32589785  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    || ||| |||||||||||| || |||||    
T  32589784 atgggtttatgggtcctcttacttataa 32589757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 9240176 - 9240118
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaacactcc-cctcaagtgtgagtccatc 158  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  9240176 gatgtggaacatataactcacacttgcacacaacactcctcctcaagtgtgagtccatc 9240118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 454
Target Start/End: Original strand, 54018144 - 54018302
Alignment:
Q  297 acccttcgtggaaccg-agctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    ||||||||| |||||| |||| |||| |||||||| |||||     |||| |||||||||| |||||||| |||||||| |||| | ||||||  ||||     
T  54018144 acccttcgttgaaccggagctctgatgccactgtttggtcaccgtaggagtcagggggaccgcccacatcgaggctagaacaaccacacaagcatgagag 54018243  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||  |||||||||||||||||| ||| |||  ||||| |||||||||||| || |||||    
T  54018244 acaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataa 54018302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 441
Target Start/End: Complemental strand, 52634887 - 52634742
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    |||||||||| |||  | ||| ||||| |||||||||||||   |||||||  |||||||   | ||||| |||||||| |||||  ||||||  ||||     
T  52634887 tacccttcgtcgaagggggctctgatatcactgttgggtcactgggggagctcgggggacagtctacatcaaggctagaacaactgcacaagcaagagag 52634788  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtc 441  Q
    |||||||||||||||||||||| ||| |||||| ||| ||||||||    
T  52634787 acgtcacactcttacccaaaaccttaaggcaatgggtttatgggtc 52634742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 8880647 - 8880580
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||||||||||||||||| | ||| ||| |||| | |||||||||||||||||||||||||||    
T  8880647 tatctaactccaagtgaaatcaaataaggttcatgtaaa-tgcaggactgtgacatgattcgtcactaa 8880580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 454
Target Start/End: Original strand, 29644844 - 29645006
Alignment:
Q  296 tacccttcgtggaaccga----gctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcg 391  Q
    |||||||||| |||||||    ||||||||||||  | ||||||| |||||||||  ||||||||  ||||||| |||||| | ||||   | ||||  |    
T  29644844 tacccttcgtcgaaccgacggggctttgataccaaagctgggtcacgaggggagcttgggggaccgtccacatcgaggctaaaacaaccgcataagcaag 29644943  T
Q  392 agaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||| ||| |||||||||||||||||| ||| | |||| ||| |||||||||||| || |||||    
T  29644944 agagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataa 29645006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 37990944 - 37991081
Alignment:
Q  318 tgataccactgttgggtcatga-ggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaa 416  Q
    |||||||||||||||||||||| |||||||| | ||||||  ||||||| |||||||| |||| | | ||||  |||| ||  |||||||||||||||||    
T  37990944 tgataccactgttgggtcatgagggggagcctgagggaccgtccacatcgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaa 37991043  T
Q  417 ctttatggcaataggtgtatgggtcctctcacatataa 454  Q
    | ||| ||| ||  || ||| |||||||| || |||||    
T  37991044 ccttaaggcgatgagtttataggtcctcttacttataa 37991081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 454
Target Start/End: Complemental strand, 15773044 - 15772908
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    |||||||||||||||||||||||||||| ||   |||||  ||||||| ||| |||| |||| | ||||||  |||| ||  |||||||||| |||||||    
T  15773044 tgataccactgttgggtcatgaggggagtcaaaaggaccgtccacatcgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaac 15772945  T
Q  418 tttatggcaataggtgtatgggtcctctcacatataa 454  Q
     |||  |||||  || |||||||||||| || |||||    
T  15772944 cttaaagcaatgagtttatgggtcctcttacttataa 15772908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8146653 - 8146731
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||  | ||||  |||| |||||||||||| ||||||||    
T  8146653 ataataatacctatctaactccaagtaaaatcaaacatggtgca-atgaagtgtaggagtgtgacatgatttgtcactaa 8146731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 454
Target Start/End: Original strand, 39934964 - 39935059
Alignment:
Q  359 ccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||||||| |||||||| |||| | ||||||  |||| || |||||||||||| |||||||||| |||||| ||| ||||| |||||| || |||||    
T  39934964 ccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataa 39935059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 3135422 - 3135483
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaac 379  Q
    ||||||||| |||||||||||||| ||| ||||||||||  ||||||| |||||||| ||||    
T  3135422 tgataccacagttgggtcatgaggagagtcagggggaccgtccacatcgaggctagaacaac 3135483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 21832475 - 21832532
Alignment:
Q  102 atgtggaacatataagacacacttgcacacaacactcc-cctcaagtgtgagtccatc 158  Q
    |||||| ||||||||  |||||||||||| |||||||| |||||||||||||||||||    
T  21832475 atgtgggacatataactcacacttgcacataacactccgcctcaagtgtgagtccatc 21832532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 13586419 - 13586482
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtca 76  Q
    |||||||||||||||||||||||||| ||| ||| | |||| |||||| ||||||||||| ||||    
T  13586419 tatctaactccaagtgaaatcaaacaaggttcatgt-aagtgcaggacggtgacatgatttgtca 13586482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 454
Target Start/End: Complemental strand, 25755572 - 25755448
Alignment:
Q  330 tgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaata 429  Q
    ||||||||||||||||   ||||||||| ||||||| |||||||| ||||   ||||||  |||| ||| |||||| ||||||| ||||||| | ||||     
T  25755572 tgggtcatgaggggagttcgggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacgccacacttttacccacaactttaggacaatg 25755473  T
Q  430 ggtgtatgggtcctctcacatataa 454  Q
    | | |||| ||||||| || |||||    
T  25755472 gatttatgagtcctcttacttataa 25755448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 37726655 - 37726587
Alignment:
Q  349 gggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    ||||||||  ||||||| |||||||| ||||||||||||   || |||||||||||||||| |||||||    
T  37726655 gggggaccgtccacatcgaggctagaacaactatacaagtaagataaacgtcacactcttatccaaaac 37726587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 374
Target Start/End: Complemental strand, 9240026 - 9239947
Alignment:
Q  296 tacccttcgtggaaccgagctt-tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctaga 374  Q
    ||||||| || |||||||| || |||||| |||||||| |||||||||||||  ||||||||  ||||||| ||||||||    
T  9240026 taccctttgttgaaccgaggttctgatactactgttggatcatgaggggagcttgggggaccgtccacatcgaggctaga 9239947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 33803197 - 33803347
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtcat-gaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgag 393  Q
    |||||||||| ||| |||| || ||||||||||||||| |||| || |||||   ||||||||  ||||||| |||||||| |||| | ||||| | | |    
T  33803197 tacccttcgtcgaatcgaggctctgataccactgttgg-tcattgatgggagtttgggggaccgtccacatcgaggctagaacaaccacacaagagaggg 33803295  T
Q  394 aaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    | ||| ||||||||||||||| || |||  ||||| ||| ||||||||||||    
T  33803296 agacgccacactcttacccaataccttaatgcaatgggtttatgggtcctct 33803347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 22303700 - 22303754
Alignment:
Q  391 gagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    |||||||  |||||||||||||||||| ||| |||||| ||| ||||||||||||    
T  22303700 gagaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctct 22303754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 379
Target Start/End: Complemental strand, 22304408 - 22304322
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtca-tgagggg-agccagggggaccacccacatctaggctagagcaac 379  Q
    |||||||||| |||||| | || ||||||||||||||||||| ||||||| ||| |||||||||  ||||||| |||||||| ||||    
T  22304408 tacccttcgtcgaaccggggctctgataccactgttgggtcagtgaggggaagctagggggaccgtccacatcgaggctagaacaac 22304322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 42342221 - 42342289
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaaca---ctcccc-tcaagtgtgagtccatcatttcat 165  Q
    |||||||||||||| |  |||||||||||||||||   |||||| |||||||||||||||||| |||||    
T  42342221 gatgtggaacatatgaatcacacttgcacacaacaacactccccctcaagtgtgagtccatcaattcat 42342289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 22304273 - 22304208
Alignment:
Q  101 gatgtggaacatataagacacacttgcacac-aacactcccc-tcaagtgtgagtccatcatttca 164  Q
    ||||||| ||||||||  |||||||||| || |||||||||| |||||||||||||||||| ||||    
T  22304273 gatgtgggacatataactcacacttgcaaaccaacactccccctcaagtgtgagtccatcaattca 22304208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 2300000 - 2299942
Alignment:
Q  104 gtggaacatataagacacacttgcacacaacact---cccctcaagtgtgagtccatca 159  Q
    |||| ||||||||  ||||||||||||||||| |   ||||||||||||||||||||||    
T  2300000 gtgggacatataacccacacttgcacacaacaatatccccctcaagtgtgagtccatca 2299942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 3135048 - 3135100
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcatgaggggagcca 348  Q
    ||||||| || |||| | ||| |||||||||| ||||||||||||||||||||    
T  3135048 taccctttgtcgaacggtgctctgataccactattgggtcatgaggggagcca 3135100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 445
Target Start/End: Original strand, 3384317 - 3384361
Alignment:
Q  401 acactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    ||||||||||||||||||||| |||| || || ||||||||||||    
T  3384317 acactcttacccaaaactttaaggcattaagtttatgggtcctct 3384361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 8328378 - 8328346
Alignment:
Q  127 cacacaacactcccctcaagtgtgagtccatca 159  Q
    |||||||||| ||||||||||||||||||||||    
T  8328378 cacacaacacccccctcaagtgtgagtccatca 8328346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 15773219 - 15773157
Alignment:
Q  101 gatgtggaacatataagacacacttgcacac---aacact-cccctcaagtgtgagtccatca 159  Q
    ||||||| ||||||||  |||||||||||||   |||||| ||||||||||||||||||||||    
T  15773219 gatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatca 15773157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 428
Target Start/End: Complemental strand, 15773375 - 15773272
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagc--gcgagaaacgtcacactcttacccaaaactttatgg 424  Q
    |||||| ||||||||||||  ||| ||| |  ||||||| ||| |||| |||| | ||||||  || ||| || ||||||||||||||||||||||| ||    
T  15773375 tgttggatcatgaggggagttaggaggatcgtccacatcgaggttagaacaaccacacaagcaagcaagagacatcacactcttacccaaaactttaagg 15773276  T
Q  425 caat 428  Q
    ||||    
T  15773275 caat 15773272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 37990615 - 37990743
Alignment:
Q  327 tgttgggtcat-gaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggc 425  Q
    ||||||||||| |||| ||||  ||||||||  ||||||| |||||||| |||  | ||||||  |||| ||  |||||||||||||||||| ||| |||    
T  37990615 tgttgggtcattgaggagagctcgggggaccgtccacatcgaggctagaacaatcacacaagcaagagagacaccacactcttacccaaaaccttaaggc 37990714  T
Q  426 aataggtgtatgggtcctctcacatataa 454  Q
    |||  || |||| ||||||| || |||||    
T  37990715 aatgagtttatgagtcctcttacttataa 37990743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 349
Target Start/End: Complemental strand, 47157691 - 47157659
Alignment:
Q  317 ttgataccactgttgggtcatgaggggagccag 349  Q
    |||||||||||||||| ||||||||||||||||    
T  47157691 ttgataccactgttggatcatgaggggagccag 47157659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21320387 - 21320482
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaatttt 99  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||| ||||||||   |||||||||||||||||    
T  21320387 ataataatacatatctaactccaagtgaaatcagatagggtgcatttaaagtgtaggactgtgacatgatccgtcacta---aacaagaaagaaatttt 21320482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29762093 - 29762014
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  29762093 ataataatacatatctaactccaagtggaatcaaacaaggtgcatttaaagtgtaggactgtgacatgattcgtcactaa 29762014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 314 - 502
Target Start/End: Original strand, 4154632 - 4154825
Alignment:
Q  314 gctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttaccca 413  Q
    |||||||||||||||||||||||||| ||||| | | |||||||| ||||||||||| |||||||| | ||||  |||||| ||| ||||||||||||||    
T  4154632 gctttgataccactgttgggtcatgaagggagtccgagggaccactcacatctaggccagagcaaccacacaa--gcgagagacgccacactcttaccca 4154729  T
Q  414 aaactttatggcaataggtgtatgggtcctctcacatataaagggcttaacccccact------tca-atgttggacatataactcacacttgcac 502  Q
    |||| ||  ||||||  || |||||||||| |||| ||||||| | | |||| |||||      ||| |||| |||||||||||||||||||||||    
T  4154730 aaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggacatataactcacacttgcac 4154825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17099455 - 17099376
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||| |  ||||| ||||||||||||||||||||    
T  17099455 ataataatacctatctaactccaagtgaaatcaaaaagggtgcatttaaattgtaggaccgtgacatgattcgtcactaa 17099376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 25231513 - 25231592
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||    
T  25231513 ataataatacctatctaaatccaagtgaaatcaaatagggtgcatttaaagtgtaggattgtgacatgattcgtcactaa 25231592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 445
Target Start/End: Complemental strand, 147641 - 147514
Alignment:
Q  318 tgataccactgttgggtcatgaggggagcca-gggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaa 416  Q
    ||||| ||||||||||||||| ||||||| | ||||||||||||||||| | |||||| | ||   ||||||  |||| ||| |||||||||||||||||    
T  147641 tgatatcactgttgggtcatg-ggggagctatgggggaccacccacatcaatgctagaactaccgcacaagcaagagagacgccacactcttacccaaaa 147543  T
Q  417 ctttatggcaataggtgtatgggtcctct 445  Q
    ||||| |||||||||| ||||||||||||    
T  147542 ctttaaggcaataggtttatgggtcctct 147514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 17511743 - 17511819
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcact 78  Q
    ||||||||||||||||||||||||||||||||||||| |||  || | |||| |||||||||||||||||||||||||    
T  17511743 ataataatacatatctaactccaagtgaaatcaaacaaggtttatgt-aagtgcaggactgtgacatgattcgtcact 17511819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 318 - 454
Target Start/End: Complemental strand, 3669877 - 3669741
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    ||||||||| ||||||||| ||||||||| |||||||||| ||||||| |||||||| ||||   ||||||  |||| ||  ||||||||||||||||||    
T  3669877 tgataccaccgttgggtcacgaggggagctagggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaac 3669778  T
Q  418 tttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||| ||||||  || |||| ||||||| || |||||    
T  3669777 cttaaggcaatgagtttatgagtcctcttacttataa 3669741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 428
Target Start/End: Original strand, 20995393 - 20995494
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||||| |||||||||||| ||||||||||| |||||||| |||||||| | ||||| | |||| ||  |||| ||||||||||||| ||| ||||    
T  20995393 tgttgggtcacgaggggagccagagggaccacccatatctaggccagagcaaccacacaagtgagagagacaccacattcttacccaaaaccttaaggca 20995492  T
Q  427 at 428  Q
    ||    
T  20995493 at 20995494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 15175687 - 15175609
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||| | | || |||||||||||||| ||||||||||||    
T  15175687 ataataatacctatctaactccaagtgaaatcaaatagggttcatgt-acgtgcaggactgtgacataattcgtcactaa 15175609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 296 - 454
Target Start/End: Original strand, 18371939 - 18372098
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcatgaggggagc-cagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    ||||||| || |||||  ||| ||||||||||||||||||||||||||||| | |||| |||   |||||  |||||||||||||   ||||||| ||||    
T  18371939 taccctttgtcgaaccaggctctgataccactgttgggtcatgaggggagctcgggggaaccgttcacattgaggctagagcaaccgcacaagcgagaga 18372038  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||  |||||||||||||||||| |||  |||||  || ||||| |||||| || |||||    
T  18372039 aacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataa 18372098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 456
Target Start/End: Original strand, 3038256 - 3038396
Alignment:
Q  318 tgataccactgttgggtca-tgag-gggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaa 415  Q
    ||||||||||||||||||| |||| ||||||  || |||||  ||||||| |||||||| |||| | ||||||  |||| | | ||||||||||||||||    
T  3038256 tgataccactgttgggtcactgagagggagctcggaggaccgtccacatcgaggctagaacaaccacacaagcaagagagatgccacactcttacccaaa 3038355  T
Q  416 actttatggcaataggtgtatgggtcctctcacatataaag 456  Q
    || ||| |||||| ||| |||||||||| | || |||||||    
T  3038356 accttaaggcaatgggtttatgggtccttttacttataaag 3038396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 24721593 - 24721514
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaaca-gggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||| ||||| |||||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||| ||||||||    
T  24721593 ataaaaatacctatctaactccaagtgaaatcaaacaggggttcatgt-aagtgcaggactgtgacatgattagtcactaa 24721514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 442
Target Start/End: Complemental strand, 40518284 - 40518137
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcat-gaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    |||||||||| |||| | ||| |||||||| |||| |||||  | |||||||  ||||||||  ||||||| |||||||| |||| | ||||||  ||||    
T  40518284 tacccttcgtcgaacggggctctgataccattgtttggtcaccggggggagctcgggggaccgtccacatcaaggctagaacaaccacacaagcaagaga 40518185  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcc 442  Q
     ||| |||||||||||||||||| ||| |||| | ||| |||||||||    
T  40518184 gacgccacactcttacccaaaaccttaaggcattgggtttatgggtcc 40518137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 2467680 - 2467587
Alignment:
Q  328 gttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaacttta 421  Q
    ||||||| ||||||||| | ||  |||||||  |||||||||||| |||||| ||||||| | |||| |||||||||| ||||| |||||||||    
T  2467680 gttgggttatgaggggatcgagcaggaccacatacatctaggctaaagcaaccatacaagtgagagagacgtcacacttttaccaaaaacttta 2467587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 456
Target Start/End: Original strand, 8918810 - 8918870
Alignment:
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataaag 456  Q
    |||||||||||||||||||||| ||| | |||||||| |||||||||||| || |||||||    
T  8918810 acgtcacactcttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaag 8918870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 18571359 - 18571426
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||||||||||||||||| ||||| ||| | |||| ||||||||| |||||||| ||||||||    
T  18571359 tatctaactccaagtgaaatcaaatagggttcatgt-aagtgcaggactgtcacatgatttgtcactaa 18571426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 428
Target Start/End: Complemental strand, 34835087 - 34834956
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    |||||||||| |||||| ||| |||||||||||||||||||  | ||||||    |||| || ||||||| |||||||| |||| | ||||||  ||||     
T  34835087 tacccttcgtcgaaccgggctctgataccactgttgggtcacta-gggagcgcaagggatcatccacatcgaggctagaacaaccacacaagcaagagag 34834989  T
Q  396 acgtcacactcttacccaaaactttatggcaat 428  Q
    ||  |||||||||||||||||| ||| ||||||    
T  34834988 acaccacactcttacccaaaaccttaaggcaat 34834956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 20870550 - 20870677
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||||||||||||||||||| |||||  ||| ||| ||| |||| |||| | ||||||  |||| ||  |||||||||| ||||||  ||| ||||    
T  20870550 tgttgggtcatgaggggagccaggaggaccgtccatatcaaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaatcttaaggca 20870649  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
     | ||| |||||||||||| || |||||    
T  20870650 gtgggtttatgggtcctcttacttataa 20870677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 30441266 - 30441139
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||||| ||||||||||| || |||   ||||||| |||||||| ||||   ||||||  |||| ||  |||||||||||||||||| ||| ||||    
T  30441266 tgttgggtcacgaggggagccaaggtgactgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 30441167  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    || ||| |||||| ||||| || |||||    
T  30441166 atgggtttatgggccctcttacttataa 30441139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 34835390 - 34835263
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||| ||||||  |||||||||||||||||  | ||||| ||||||||  ||| | ||||||  |||  ||  |||||||||||||||||||||| ||||    
T  34835390 tgttaggtcattgggggagccagggggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggca 34835291  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    ||  || |||||||||||| || |||||    
T  34835290 atgagtttatgggtcctcttacttataa 34835263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 34835656 - 34835529
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||| ||||||  |||||||||||||||||  | ||||| ||||||||  ||| | ||||||  |||  ||  |||||||||||||||||||||| ||||    
T  34835656 tgttaggtcattgggggagccagggggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggca 34835557  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    ||  || |||||||||||| || |||||    
T  34835556 atgagtttatgggtcctcttacttataa 34835529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 34835922 - 34835795
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||| ||||||  |||||||||||||||||  | ||||| ||||||||  ||| | ||||||  |||  ||  |||||||||||||||||||||| ||||    
T  34835922 tgttaggtcattgggggagccagggggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggca 34835823  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    ||  || |||||||||||| || |||||    
T  34835822 atgagtttatgggtcctcttacttataa 34835795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 1014002 - 1014068
Alignment:
Q  101 gatgtggaacatataagacacacttgcacac-aacactcccc-tcaagtgtgagtccatcatttcat 165  Q
    ||||||||||||||||  |||||||||| || |||||||||| |||||||||||||||||| |||||    
T  1014002 gatgtggaacatataactcacacttgcaaaccaacactccccctcaagtgtgagtccatcaattcat 1014068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 456
Target Start/End: Original strand, 4154281 - 4154386
Alignment:
Q  350 ggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcaca 449  Q
    ||||||||||||||||||||| |||||||| | ||||  | |||| || |||||| |||||||||||  ||| ||||||  || ||||||| |||||||     
T  4154281 ggggaccacccacatctaggccagagcaaccaaacaattgagagagacatcacacacttacccaaaatattaaggcaatgagtttatgggt-ctctcact 4154379  T
Q  450 tataaag 456  Q
    |||||||    
T  4154380 tataaag 4154386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 40518610 - 40518544
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaacactcccc-tcaagtgtgagtccatcatttcat 165  Q
    |||||||| ||||||||  |||||||| |||||| ||||||| |||||||||||||||||| |||||    
T  40518610 tgatgtgggacatataactcacacttgaacacaatactccccctcaagtgtgagtccatcaattcat 40518544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 456
Target Start/End: Original strand, 9620646 - 9620782
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    ||||||||  ||||||||| |||||||||| ||||||||  ||||||| ||||  ||||||| | ||||| | |||| || ||| |||||||   ||||     
T  9620646 tgataccatcgttgggtcacgaggggagcccgggggaccgtccacatccaggcctgagcaaccacacaagtgagagagacatcaaactcttat--aaaat 9620743  T
Q  418 tttatggcaataggtgtatgggtcctctcacatataaag 456  Q
     ||| ||||||  || ||||||||||||||| |||||||    
T  9620744 cttaaggcaatgagtttatgggtcctctcacttataaag 9620782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 454
Target Start/End: Complemental strand, 45122841 - 45122678
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcatgaggggag-----ccagggggaccacccacatctaggctagagcaactatacaagcgc 390  Q
    |||||||||| ||||   ||| |||| |||||||| ||||||| ||||||     |||||||||||  ||||||| ||||| || |||| | ||||||      
T  45122841 tacccttcgtcgaactaggctctgatgccactgtttggtcatggggggagtcgggccagggggaccttccacatcgaggcttgaacaaccacacaagcaa 45122742  T
Q  391 gagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||| ||| ||||||| |||||||||| ||| | ||||  || |||||||||||| || |||||    
T  45122741 gagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataa 45122678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 147856 - 147788
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaaca---ctcccc-tcaagtgtgagtccatcatttcat 165  Q
    ||||||| ||||||||  |||||||||||||||||   |||||| |||||||||||||||||| |||||    
T  147856 gatgtgggacatataactcacacttgcacacaacaacactccccctcaagtgtgagtccatcaattcat 147788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 440
Target Start/End: Complemental strand, 148000 - 147888
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||||||| ||||||| | | ||||| | |||||  |||||||| |||||  |||||   |||| ||  |||||||||||||||||| ||| ||||    
T  148000 tgttgggtcatg-ggggagctatgaggaccgctcacattgaggctagaacaactgcacaagtaagagagacaccacactcttacccaaaaccttaaggca 147902  T
Q  427 ataggtgtatgggt 440  Q
    |||||| |||||||    
T  147901 ataggtttatgggt 147888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 444
Target Start/End: Complemental strand, 3670209 - 3670124
Alignment:
Q  359 ccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctc 444  Q
    ||||||| |||||||| ||||   ||||||  |||| ||  |||||||||||||||||| ||| || ||||||| |||||||||||    
T  3670209 ccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctc 3670124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 25561815 - 25561920
Alignment:
Q  350 ggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactctta-cccaaaactttatggcaataggtgtatgggtcctctcac 448  Q
    |||||||  ||||||| ||||||||||||| | ||||||  |||| | |||||||||||| |||||||| ||| | ||||  || |||||||||||| ||    
T  25561815 ggggaccttccacatcgaggctagagcaaccacacaagcaagagagatgtcacactcttaccccaaaaccttaagacaatgagtttatgggtcctcttac 25561914  T
Q  449 atataa 454  Q
     |||||    
T  25561915 ttataa 25561920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 6876837 - 6876953
Alignment:
Q  325 actgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatgg 424  Q
    |||| ||||||||  |||||||  ||||||||  ||||||| |||||||| |||| | |||| |  |||||||  ||||||||||||||||||  || |     
T  6876837 actgctgggtcattgggggagctcgggggaccgtccacatcgaggctagaacaaccacacaaacaagagaaacaccacactcttacccaaaaccctaaga 6876936  T
Q  425 caataggtgtatgggtc 441  Q
    ||||  |||||||||||    
T  6876937 caatgagtgtatgggtc 6876953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 18372502 - 18372562
Alignment:
Q  101 gatgtggaacatataagacacacttgcaca-caacactcccc-tcaagtgtgagtccatca 159  Q
    ||||||| ||||||||  ||||||| |||| ||||||||||| ||||||||||||||||||    
T  18372502 gatgtgggacatataactcacactttcacaacaacactccccctcaagtgtgagtccatca 18372562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 445
Target Start/End: Original strand, 32640507 - 32640627
Alignment:
Q  326 ctgttgggtcatgaggggagc-cagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatgg 424  Q
    ||||| ||||||||||||||| | || ||||| | |||||| |||||||| |||  | | ||||  |||| |||  ||||||||||||||||| ||| ||    
T  32640507 ctgtttggtcatgaggggagctctggcggaccgctcacatcgaggctagaacaatcacaaaagcaagagagacgcaacactcttacccaaaaccttaagg 32640606  T
Q  425 caataggtgtatgggtcctct 445  Q
    |||| ||| ||| ||||||||    
T  32640607 caatgggtttatcggtcctct 32640627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 11176849 - 11176763
Alignment:
Q  10 catatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaat 96  Q
    |||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  11176849 catatctaactccaagagaaatcaaacaaggtgattttaaagttcaggactgtgacatgattcgtcacttagtaataagaaagaaat 11176763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 296 - 454
Target Start/End: Complemental strand, 35210416 - 35210258
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    |||||||||| |||||||| ||||||||||||||||||||||   ||||||||||||| |||  ||||||| |||||||||||||   ||||||   |||    
T  35210416 tacccttcgtcgaaccgaggctttgataccactgttgggtcactgggggagccagggg-accgtccacatcgaggctagagcaaccgcacaagcaaaaga 35210318  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||  |||||||||||||||||| ||| |||||| | | |||||||||||| || |||||    
T  35210317 aacaccacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataa 35210258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 22570696 - 22570794
Alignment:
Q  1 ataataata-catatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaagaaattt 98  Q
    ||||||||| |||||||||||||||| ||||||||||| | ||| ||||| ||||||||||||||||||||| |||||| |||| ||||| ||||||||    
T  22570696 ataataatatcatatctaactccaagagaaatcaaacatgctgcttttaaggttcaggactgtgacatgatttgtcacttagtatcaagagagaaattt 22570794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 454
Target Start/End: Complemental strand, 16454788 - 16454629
Alignment:
Q  296 tacccttcgtggaacc-gagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    |||||||||| ||||| | ||| ||||||||||||||||||| |||||||||  ||||||||  ||||||| |||||||| ||||   ||||||  ||||    
T  16454788 tacccttcgtcgaacctgggctctgataccactgttgggtcacgaggggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagaga 16454689  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||| |||||||||| ||||||  ||| |||||| ||| |||||||||||| || |||||    
T  16454688 gacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataa 16454629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 454
Target Start/End: Complemental strand, 16107893 - 16107732
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtca-tga-ggggagccagggggaccacccacatctaggctagagcaactatacaagcgcga 392  Q
    |||||||||| |||||| | || ||||||||||||||||||| ||| ||||||  ||||| |||||||||||| |||||||||||||   ||||||  ||    
T  16107893 tacccttcgtcgaaccggggctctgataccactgttgggtcactgaaggggagttaggggtaccacccacatcgaggctagagcaaccgcacaagcaaga 16107794  T
Q  393 gaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    || ||  |||||||||||||||||| ||| |||||| ||| |||| ||||||| || |||||    
T  16107793 gagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataa 16107732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 454
Target Start/End: Complemental strand, 29518715 - 29518557
Alignment:
Q  297 acccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    ||||||||| |||||| | || ||||||||||||||||| ||||| |||||  ||||||||  ||||||| |||||||| ||||   ||||||  ||||     
T  29518715 acccttcgtcgaaccggggctctgataccactgttgggttatgagaggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagag 29518616  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||  |||||||||||||||||| ||| || ||| ||| |||||||||||| || |||||    
T  29518615 acaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataa 29518557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 16455088 - 16454972
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||| | |||||||||||  ||||||||  ||||||| |||||||| ||||   ||||||  |||| ||| |||||||||||||||||| ||| ||||    
T  16455088 tgttggattatgaggggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggca 16454989  T
Q  427 ataggtgtatgggtcct 443  Q
    |||||| ||||||||||    
T  16454988 ataggtttatgggtcct 16454972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 456
Target Start/End: Original strand, 2578420 - 2578549
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    ||||||||||||||||| || |||||||||  ||||||| |||||||| ||||   ||||||   ||| ||  |||||||||||||||||| ||| |||     
T  2578420 tgttgggtcatgaggggggctagggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggct 2578519  T
Q  427 ataggtgtatgggtcctctcacatataaag 456  Q
    || ||| |||||||||||| || |||||||    
T  2578520 atgggtttatgggtcctcttacttataaag 2578549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 443
Target Start/End: Original strand, 12071659 - 12071784
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    ||||||||||||| |||||||||||||||   |||||||   |||||| |||||||| |||| | ||||| | |||| ||| ||||||||||||||||||    
T  12071659 tgataccactgttaggtcatgaggggagcttaggggaccgttcacatcgaggctagaacaaccacacaagtgagagagacgccacactcttacccaaaac 12071758  T
Q  418 tttatggcaataggtgtatgggtcct 443  Q
     ||| ||  |||||| |||| |||||    
T  12071759 cttaaggtcataggtttatgagtcct 12071784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 472
Target Start/End: Original strand, 12092460 - 12092604
Alignment:
Q  328 gttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaa 427  Q
    |||||| || |||||| |||| |||||||||||||||| |||| ||||||||   ||||| | |||| ||  |||| |||||| |||||| ||| |||||    
T  12092460 gttgggacacgaggggggccaaggggaccacccacatccaggccagagcaacctcacaagtgagagagacaccacagtcttactcaaaaccttaaggcaa 12092559  T
Q  428 taggtgtatgggtcctctcacatataaagggcttaacccccactt 472  Q
    |  || ||||| ||||||||| ||||||| ||| |||| ||||||    
T  12092560 tgagtttatggatcctctcacttataaagtgctcaacctccactt 12092604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 454
Target Start/End: Original strand, 2579818 - 2579976
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    ||||||||||||||||| | || ||||||||||||||||| |||||||||| |  |||||||  ||||||| |||||||| ||||   ||||||  ||||    
T  2579818 tacccttcgtggaaccggggctctgataccactgttgggtaatgaggggag-cttggggaccttccacatcgaggctagaacaaccgcacaagcaagaga 2579916  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||  |||| ||||||||||||| ||| |||  | ||| |||||||||||| || |||||    
T  2579917 gacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataa 2579976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 454
Target Start/End: Original strand, 10074341 - 10074467
Alignment:
Q  328 gttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaa 427  Q
    |||||||||  ||||||||| ||||||| | ||||||| |||||||| |||| | || || | |||| ||  |||||||||||||||||| ||| |||||    
T  10074341 gttgggtcacaaggggagcctgggggactatccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaa 10074440  T
Q  428 taggtgtatgggtcctctcacatataa 454  Q
    |  || |||||||||||| || |||||    
T  10074441 tgagtttatgggtcctcttacttataa 10074467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 454
Target Start/End: Complemental strand, 32741361 - 32741233
Alignment:
Q  326 ctgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggc 425  Q
    ||||||||| ||||| |||||  ||||||||  ||||||| |||||||| ||||   ||||||  |||| ||  |||||||||||||||||| ||| ||     
T  32741361 ctgttgggttatgagaggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggt 32741262  T
Q  426 aataggtgtatgggtcctctcacatataa 454  Q
    ||| ||| |||||||||||| || |||||    
T  32741261 aatgggtttatgggtcctcttacttataa 32741233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 454
Target Start/End: Complemental strand, 29519101 - 29518974
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||| ||||| |||||  ||||||||  ||||||| |||||||| ||||   ||||||  |||| ||  |||||||||||||||||| ||| || |    
T  29519101 tgttgggttatgagaggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggta 29519002  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    || ||| |||||||||||| || |||||    
T  29519001 atgggtttatgggtcctcttacttataa 29518974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 454
Target Start/End: Complemental strand, 2377966 - 2377808
Alignment:
Q  297 acccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    ||||||||| |||||| | || |||||||||||||||||||   ||| |||  ||||||||  ||||||| ||||||||  ||| |  |||||  || |     
T  2377966 acccttcgtcgaaccggggctctgataccactgttgggtcactggggaagctcgggggaccttccacatcgaggctagaaaaaccactcaagcaagaaag 2377867  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||  |||||||||||||||||| ||| |||||| ||| |||||||||||| || |||||    
T  2377866 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataa 2377808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 417
Target Start/End: Original strand, 2578780 - 2578902
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    |||||||||| |||||| | || ||||||||||||||  |||||||||||||| ||||||||  ||||||| |||  ||| |||| | ||||||   |||    
T  2578780 tacccttcgtcgaaccggggctctgataccactgttgattcatgaggggagcctgggggaccgtccacatcgaggtcagaacaaccacacaagcaaaaga 2578879  T
Q  395 aacgtcacactcttacccaaaac 417  Q
     ||  ||||||||||||||||||    
T  2578880 gacaccacactcttacccaaaac 2578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 6071158 - 6071058
Alignment:
Q  102 atgtggaacatataagacacacttgcacacaacactc---ccctcaagtgtgagtccatcatttcataattctatcccctcaaaccgaagttctttcatc 198  Q
    |||||| ||||||||  ||||||||||||||||| ||   ||||||| ||||||||||||| ||||| || ||  ||||| |||| |||| |||||||||    
T  6071158 atgtgggacatataactcacacttgcacacaacaatcttcccctcaaatgtgagtccatcaattcatcatgctcaccccttaaacggaagctctttcatc 6071059  T
Q  199 c 199  Q
    |    
T  6071058 c 6071058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 322 - 379
Target Start/End: Original strand, 30618590 - 30618646
Alignment:
Q  322 accactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaac 379  Q
    ||||||||||||||| ||||||||||  ||||||||||||||| ||||| ||||||||    
T  30618590 accactgttgggtcacgaggggagccttggggaccacccacat-taggcaagagcaac 30618646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 323 - 447
Target Start/End: Complemental strand, 31714854 - 31714730
Alignment:
Q  323 ccactgttgggtcat-gaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaacttta 421  Q
    |||| |||||||||| |||||||| | ||| ||||  ||||||| ||||||||||||| | |||||||  | ||||| ||||||||||| |||||| |||    
T  31714854 ccacagttgggtcattgaggggagtctgggagaccgtccacatcgaggctagagcaaccacacaagcgaaa-aaacgccacactcttactcaaaacctta 31714756  T
Q  422 tggcaataggtgtatgggtcctctca 447  Q
     ||||||  ||  |||||||||||||    
T  31714755 aggcaatgagttaatgggtcctctca 31714730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 1127518 - 1127414
Alignment:
Q  350 ggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcaca 449  Q
    |||||||||||||||| ||| ||||||||| | | |||   |||| ||| |||||||||||||||||| ||| || ||| ||| |||| ||||||| ||     
T  1127518 ggggaccacccacatcgaggttagagcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttact 1127419  T
Q  450 tataa 454  Q
    |||||    
T  1127418 tataa 1127414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 22525921 - 22525849
Alignment:
Q  15 ctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaa 87  Q
    ||||||||||| ||||||||| ||  ||||||||| |||||||||||||||   ||| |||||| ||||||||    
T  22525921 ctaactccaagagaaatcaaatagattgcatttaaggttcaggactgtgactctatttgtcacttagtaacaa 22525849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 10074512 - 10074559
Alignment:
Q  119 cacacttgcacacaacact-cccctcaagtgtgagtccatcatttcat 165  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  10074512 cacacttgcacacaacactcccccttaagtgtgagtccatcaattcat 10074559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 16108091 - 16108022
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaaca---ctcccc-tcaagtgtgagtccatcatttcat 165  Q
    |||||||||||||||||  |||||||| ||||||||   |||||| |||||||||||||||||| |||||    
T  16108091 tgatgtggaacatataactcacacttgtacacaacaacactccccctcaagtgtgagtccatcaattcat 16108022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 28588341 - 28588295
Alignment:
Q  46 ttaaagttcaggactgtgacatgattcgtcactaagtaacaagaaag 92  Q
    |||| ||||| |||||||||||||||||||||| |||||||| ||||    
T  28588341 ttaaggttcaagactgtgacatgattcgtcacttagtaacaacaaag 28588295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 29518947 - 29518881
Alignment:
Q  101 gatgtggaacatataagacacacttgcacac-aacactcccc-tcaagtgtgagtccatcatttcat 165  Q
    ||||||| ||||||||  |||||||||| || |||||||||| |||||||||||||||||| |||||    
T  29518947 gatgtgggacatataactcacacttgcaaaccaacactccccctcaagtgtgagtccatcaattcat 29518881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 377
Target Start/End: Complemental strand, 33605829 - 33605771
Alignment:
Q  320 ataccactgttgggtcat-gaggggagccagggggaccacccacatctaggctagagca 377  Q
    |||||||||||| ||||| |||||||||||||| ||| ||||||||  |||||||||||    
T  33605829 ataccactgttgtgtcattgaggggagccagggtgacaacccacattgaggctagagca 33605771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 3409688 - 3409627
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacac-aacactcccc-tcaagtgtgagtccatca 159  Q
    |||||||| ||||||||  |||||||||| || |||||||||| ||||||||||||||||||    
T  3409688 tgatgtggtacatataactcacacttgcaaaccaacactccccctcaagtgtgagtccatca 3409627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 8481954 - 8481888
Alignment:
Q  100 tgatgtggaacatataagacacacttgcacacaacactc---ccctcaagtgtgagtccatcatttca 164  Q
    ||||||||| |||||||  ||||||||||||||||| ||   ||||||||||||||||||||| ||||    
T  8481954 tgatgtgga-catataactcacacttgcacacaacaatctccccctcaagtgtgagtccatcaattca 8481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 10073745 - 10073810
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaacactccc-ctcaagtgtgagtccatcatttcat 165  Q
    ||||||| ||||||||   ||||||||||||||||| ||| || |||||||||||||||| |||||    
T  10073745 gatgtgggacatataactaacacttgcacacaacaccccctcttaagtgtgagtccatcaattcat 10073810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 21844968 - 21844923
Alignment:
Q  7 atacatatctaactccaagtgaaatcaaacagggtgcatttaaagt 52  Q
    |||| |||||||||| ||||||||||||||||||| ||| ||||||    
T  21844968 atacctatctaactctaagtgaaatcaaacagggttcatgtaaagt 21844923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 2579460 - 2579596
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    ||||||||||||||  || ||||||||||| | || |||| ||||||| ||| |||| |||| | ||||||  |||| ||  || ||| |||||||||||    
T  2579460 tgataccactgttgattcgtgaggggagcctgtggaaccatccacatcgaggttagaacaaccacacaagcaagagagacaccatacttttacccaaaac 2579559  T
Q  418 tttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||| ||||||  || |||||| ||||| || |||||    
T  2579560 cttaaggcaatgagtttatgggccctcttacttataa 2579596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 454
Target Start/End: Original strand, 10073991 - 10074095
Alignment:
Q  350 ggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcaca 449  Q
    |||||||  |||| || |||||||| |||| | | ||||| |||| ||  |||||| ||||||||||| ||| |||||| ||| |||||||||||| ||     
T  10073991 ggggaccgtccacgtcgaggctagaacaaccaaataagcgagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttact 10074090  T
Q  450 tataa 454  Q
    |||||    
T  10074091 tataa 10074095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 454
Target Start/End: Original strand, 32460628 - 32460684
Alignment:
Q  398 gtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||||||||||||||||||| ||| |||||| ||| |||| ||||||| || |||||    
T  32460628 gtcacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataa 32460684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 33606002 - 33605938
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaacactcccc-tcaagtgtgagtccatcatttca 164  Q
    ||||||| ||||||||   ||| ||||||||| |||||||| |||||||||||||||||| ||||    
T  33606002 gatgtgggacatataacttacatttgcacacatcactccccctcaagtgtgagtccatcaattca 33605938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18828208 - 18828287
Alignment:
Q  1 ataataatacatatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaa 80  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||    
T  18828208 ataataatacctatctaactccaagtgaaatcaaagagggtgcatttaaagtgtaggattgtgacatgattcgtcactaa 18828287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 296 - 454
Target Start/End: Original strand, 31767107 - 31767265
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    |||||||||| |||| | ||| ||||||||||||||||||||||||| |||  ||||||||  ||||||| || ||||| |||| | ||||||  || |     
T  31767107 tacccttcgtcgaacggggctctgataccactgttgggtcatgagggaagcttgggggaccgtccacatcgagtctagaacaaccacacaagcaagatag 31767206  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||||||||||||||||||||| ||| |||| |||||  ||||||||||| || |||||    
T  31767207 acgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataa 31767265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 296 - 454
Target Start/End: Complemental strand, 9956122 - 9955962
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    |||||||||| |||||||| || ||||||||||||||||||| |||| |||||  ||||||| | |||||| |||||||||||||   ||||||  ||||    
T  9956122 tacccttcgtcgaaccgaggctctgataccactgttgggtcacgaggagagcctaggggaccgctcacatcgaggctagagcaaccgcacaagcaagaga 9956023  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgt-atgggtcctctcacatataa 454  Q
     || ||||||||||||||||||| ||| |||||| ||| | ||||||||||| || |||||    
T  9956022 gacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataa 9955962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 428
Target Start/End: Original strand, 47380134 - 47380245
Alignment:
Q  318 tgataccactgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaa 416  Q
    |||||||| |||||||||| | ||||||| |  |||||||||||||||||||||| ||||||| | ||||| | |||| | |||||||||||||||||||    
T  47380134 tgataccattgttgggtcaattaggggagtctaggggaccacccacatctaggcttgagcaaccagacaagtgagagagatgtcacactcttacccaaaa 47380233  T
Q  417 ctttatggcaat 428  Q
    ||||| ||||||    
T  47380234 ctttaaggcaat 47380245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 456
Target Start/End: Complemental strand, 17294768 - 17294629
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaac-tatacaagcgcgagaaacgtcacactcttacccaaaa 416  Q
    |||| |||||||| ||||| |||||||||  ||| ||||  ||||||| ||||||||||||| |  | ||||| |||| ||  |||||||||||||||||    
T  17294768 tgatgccactgttaggtcacgaggggagctcgggcgaccgtccacatcgaggctagagcaacctgcataagcgagagagacaccacactcttacccaaaa 17294669  T
Q  417 ctttatggcaataggtgtatgggtcctctcacatataaag 456  Q
    | ||| |||||| ||| |||||||||||| || |||||||    
T  17294668 ccttaaggcaatgggtttatgggtcctcttacttataaag 17294629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 329 - 472
Target Start/End: Original strand, 19283434 - 19283577
Alignment:
Q  329 ttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaat 428  Q
    ||||||||||||||||| || ||||||| |||||||| |||||||||||||   ||||| | |||| ||| |||||||||| ||||||| ||| ||| ||    
T  19283434 ttgggtcatgaggggagtcaaggggacctcccacatccaggctagagcaaccgcacaagtgagagagacgccacactcttatccaaaaccttaaggcgat 19283533  T
Q  429 aggtgtatgggtcctctcacatataaagggcttaacccccactt 472  Q
      || |||| |||||||||  || |||| ||| |||| ||||||    
T  19283534 gagtttatgtgtcctctcatttacaaagtgctcaacctccactt 19283577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 296 - 454
Target Start/End: Original strand, 26661843 - 26662002
Alignment:
Q  296 tacccttcgtggaaccgagctt-tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    |||||||||| ||| |||| || | |||||||| |||||||| ||||||||| |||| ||||| || |||| ||| | || |||| | ||||||  ||||    
T  26661843 tacccttcgtcgaatcgaggttctaataccacttttgggtcacgaggggagctagggagaccatccgcatcaaggattgaacaaccacacaagcaagaga 26661942  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||  |||||||||||||||||| ||| |||||| ||| |||||||| |||||| |||||    
T  26661943 gacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataa 26662002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 454
Target Start/End: Original strand, 44290769 - 44290929
Alignment:
Q  297 acccttcgtggaaccgag-ctttgataccactgttgggtca-tgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    ||||||||| |||||| | || ||||||||||||||||||| || |||||||  ||||||||  ||||||| |||||||| ||||   ||||||  ||||    
T  44290769 acccttcgtcgaaccggggctctgataccactgttgggtcagtggggggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagaga 44290868  T
Q  395 aacgtcacactctt-acccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
     ||  ||||||||| ||||||||| ||| |||||| ||| |||||||||||| || |||||    
T  44290869 tacaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataa 44290929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 26661499 - 26661626
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    |||||||||| |||| |||  |||||||||  ||| ||| ||||| || |||| | ||||||| |||| ||  |||||||||||||||||| ||| ||||    
T  26661499 tgttgggtcacgaggagagttagggggaccgtccatatcgaggcttgaacaaccacacaagcgagagagacaccacactcttacccaaaaccttaaggca 26661598  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    ||  || ||||||||||||||| |||||    
T  26661599 atgagtttatgggtcctctcacttataa 26661626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 454
Target Start/End: Complemental strand, 34364720 - 34364561
Alignment:
Q  296 tacccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    |||||||||| |||||| | || |||||||||||||||||||   |||||||   ||| |||| ||||||| |||||||||||||   | ||||| ||||    
T  34364720 tacccttcgtcgaaccggggctctgataccactgttgggtcactgggggagctcagggaaccatccacatcgaggctagagcaaccgcataagcgagaga 34364621  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
     || ||||||||||||||||||| ||| ||| || ||| || || |||||| || |||||    
T  34364620 gacatcacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttataa 34364561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 296 - 440
Target Start/End: Complemental strand, 34649651 - 34649506
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtcatgaggggagc-cagggggaccacccacatctaggctagagcaactatacaagcgcgaga 394  Q
    |||||||| | |||| | ||| |||||||||||||||||||  |||| ||| | ||||||||  ||||||| |||||||| |||| | || |||  ||||    
T  34649651 tacccttcatcgaacggggctctgataccactgttgggtcactagggaagctccgggggaccgtccacatcgaggctagaacaaccacactagcaagaga 34649552  T
Q  395 aacgtcacactcttacccaaaactttatggcaataggtgtatgggt 440  Q
     ||| | |||||||||||||||| ||| |||| ||||| |||||||    
T  34649551 gacgcctcactcttacccaaaaccttaaggcattaggtttatgggt 34649506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 50051992 - 50052127
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaac 417  Q
    ||||||||||||||||||| |||||||||  |||||||   ||||||| ||| |||| |||| | | || |  |||| ||  ||||||||||||||||||    
T  50051992 tgataccactgttgggtcacgaggggagctcgggggactgtccacatcgaggttagaacaac-acataaacaagagagacaccacactcttacccaaaac 50052090  T
Q  418 tttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||| |  ||||||| |||||||||||| || |||||    
T  50052091 tttaagaaaataggtttatgggtcctcttacttataa 50052127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 22077253 - 22077311
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaacact-cccctcaagtgtgagtccatc 158  Q
    ||||||| ||||||||  ||||||||||||||||||| ||||||||||||| |||||||    
T  22077253 gatgtgggacatataactcacacttgcacacaacactccccctcaagtgtgtgtccatc 22077311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 22077634 - 22077683
Alignment:
Q  109 acatataagacacacttgcacacaacact-cccctcaagtgtgagtccat 157  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  22077634 acatataactcacacttgcacacaacactccccctcaagtgtgagtccat 22077683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 30630777 - 30630834
Alignment:
Q  109 acatataagacacacttgcacacaacactccc-ctcaagtgtgagtccatcatttcat 165  Q
    ||||||||  |||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  30630777 acatataaatcacacttgcacataacactccctctcaagtgtgagtccatcaattcat 30630834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 454
Target Start/End: Complemental strand, 41157206 - 41157045
Alignment:
Q  296 tacccttcgtggaaccgagctttgataccactgttgggtca-tga-ggggagcca-gggggaccacccacatctaggctagagcaactatacaagcgcga 392  Q
    ||||||| || |||| | ||| |||||||| |||||||||| ||| ||||||||  |||||||| |||||||| |||||||| |||| | ||||||   |    
T  41157206 taccctttgtcgaacggggctctgataccattgttgggtcactgaaggggagccttgggggaccgcccacatcgaggctagaacaaccacacaagcaata 41157107  T
Q  393 gaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    || ||  |||||||||||||||||| |||  |||||  || |||||||||||| || |||||    
T  41157106 gagacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataa 41157045  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 66238 - 66278
Alignment:
Q  119 cacacttgcacacaacact-cccctcaagtgtgagtccatc 158  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  66238 cacacttgcacacaacacttcccctcaagtgtgagtccatc 66278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 34365079 - 34364979
Alignment:
Q  354 accacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatata 453  Q
    |||| ||||||| ||| ||||||||||  | ||||| |||| ||  |||||||||||||||||| ||| ||| || ||| |||||||||||| || ||||    
T  34365079 accatccacatcgaggttagagcaactgcataagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttata 34364980  T
Q  454 a 454  Q
    |    
T  34364979 a 34364979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 16115649 - 16115724
Alignment:
Q  12 tatctaactccaagtgaaatcaaacagggtgcatttaaagttcaggactgtgacatgattcgtcactaagtaacaa 87  Q
    |||||||||||| | |||||||||||   ||||||||| |||||||  ||||||||||||| ||||| | ||||||    
T  16115649 tatctaactccatgagaaatcaaacaaattgcatttaaggttcagggttgtgacatgattcttcacttaataacaa 16115724  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 454
Target Start/End: Original strand, 44290435 - 44290562
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggca 426  Q
    ||||||||||   |||||||  ||||||||  ||||||| |||||||| ||||  |||||||  || | ||  || ||||||||||||||| ||| ||||    
T  44290435 tgttgggtcactgggggagctcgggggaccgtccacatcgaggctagaacaaccgtacaagcaagaaagacaccatactcttacccaaaaccttaaggca 44290534  T
Q  427 ataggtgtatgggtcctctcacatataa 454  Q
    || ||| |||||||||||| || |||||    
T  44290535 atgggtttatgggtcctcttacttataa 44290562  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 66137 - 66191
Alignment:
Q  400 cacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||||||||||||||||| ||| ||| |||||| |||||||||||| || |||||    
T  66137 cacactcttacccaaaaccttaaggccataggtttatgggtcctcttacttataa 66191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 3537278 - 3537344
Alignment:
Q  101 gatgtggaacatataagacacacttgcacac-aacactcccc-tcaagtgtgagtccatcatttcat 165  Q
    ||||||| ||||||||  |||||||||| || |||||||||| |||||||||||||||||| |||||    
T  3537278 gatgtgggacatataactcacacttgcaaaccaacactccccctcaagtgtgagtccatcaattcat 3537344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 445
Target Start/End: Original strand, 3537589 - 3537694
Alignment:
Q  339 aggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgg 438  Q
    |||||||||||||| |||  ||||||| |||||||| ||||   ||||||  |||| ||| |||||||||||||||||| ||| | |||| ||| ||| |    
T  3537589 aggggagccagggg-accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttatag 3537687  T
Q  439 gtcctct 445  Q
    |||||||    
T  3537688 gtcctct 3537694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 3550828 - 3550774
Alignment:
Q  400 cacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||||||||||||||||||||| |||||| ||| |||| ||||||| || |||||    
T  3550828 cacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataa 3550774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 445
Target Start/End: Original strand, 32168707 - 32168793
Alignment:
Q  359 ccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggcaataggtgtatgggtcctct 445  Q
    ||||||| |||||||| ||||   ||||||  |||| ||| |||||||||||||||||| | | |||||| ||| ||||||||||||    
T  32168707 ccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctcaaggcaatgggtttatgggtcctct 32168793  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 454
Target Start/End: Original strand, 3875307 - 3875435
Alignment:
Q  326 ctgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaaacgtcacactcttacccaaaactttatggc 425  Q
    ||||| |||||||||||||||  || |||||  ||||||| |||||||| |||| | || || | |||| ||  |||| ||||||| ||||| ||| |||    
T  3875307 ctgttaggtcatgaggggagctcggaggaccgtccacatcgaggctagaacaaccacactagtgagagagactccacattcttacctaaaaccttaaggc 3875406  T
Q  426 aataggtgtatgggtcctctcacatataa 454  Q
    ||| ||| |||| ||||||| || |||||    
T  3875407 aatgggtttatgagtcctcttacttataa 3875435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 5996814 - 5996866
Alignment:
Q  327 tgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaac 379  Q
    |||||||||| |||||||||  ||||||||  |||||||||||| ||||||||    
T  5996814 tgttgggtcacgaggggagcttgggggaccgtccacatctaggccagagcaac 5996866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 1651 - 1712
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaac 379  Q
    ||||||||||||||||||| ||||||||| ||||||||  |||||||| |||||||| ||||    
T  1651 tgataccactgttgggtcacgaggggagctagggggactgcccacatcgaggctagaacaac 1712  T

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Target: scaffold0391; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 1741 - 1795
Alignment:
Q  400 cacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    |||||||||||| ||||| ||| |||||| ||| ||||||||||||||| |||||    
T  1741 cacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttataa 1795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 454
Target Start/End: Original strand, 460 - 618
Alignment:
Q  297 acccttcgtggaaccgag-ctttgataccactgttgggtcatgaggggagccagggggaccacccacatctaggctagagcaactatacaagcgcgagaa 395  Q
    ||||||||| |||||| | || |||||||||||||||||||   ||| |||  ||||||||  ||||||| ||||||||  ||| |  |||||  || |     
T  460 acccttcgtcgaaccggggctctgataccactgttgggtcactggggaagctcgggggaccttccacatcgaggctagaaaaaccactcaagcaagaaag 559  T
Q  396 acgtcacactcttacccaaaactttatggcaataggtgtatgggtcctctcacatataa 454  Q
    ||  |||||||||||||||||| ||| |||||| ||| |||||||||||| || |||||    
T  560 acaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataa 618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 5384 - 5316
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaac---actc-ccctcaagtgtgagtccatcatttcat 165  Q
    ||||||||||||||||  ||||||||||||||||   |||| ||||||||||||||||||||| |||||    
T  5384 gatgtggaacatataactcacacttgcacacaacaaaactctccctcaagtgtgagtccatcagttcat 5316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 39865 - 39766
Alignment:
Q  101 gatgtggaacatataagacacacttgcacacaacact--cccctcaagtgtgagtccatcatttcataattctatcccctcaaaccgaagttctttcatc 198  Q
    ||||||| ||||||||  |||||||| |||||||| |  |||||||||||||||| ||||| ||||| || ||  |||||||| | |||| |||||||||    
T  39865 gatgtgggacatataactcacacttgaacacaacaattccccctcaagtgtgagttcatcaattcatcatgctcacccctcaagcggaagctctttcatc 39766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 365
Target Start/End: Complemental strand, 39644 - 39597
Alignment:
Q  318 tgataccactgttgggtcatgaggggagccagggggaccacccacatc 365  Q
    |||||||||||||||||||  |||||||||||||| || |||||||||    
T  39644 tgataccactgttgggtcactaggggagccaggggaactacccacatc 39597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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