View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11909_low_26 (Length: 238)

Name: NF11909_low_26
Description: NF11909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11909_low_26
NF11909_low_26
[»] chr5 (34 HSPs)
chr5 (47-225)||(27179101-27179279)
chr5 (1-59)||(38637899-38637957)
chr5 (131-191)||(23074812-23074872)
chr5 (150-206)||(43230072-43230128)
chr5 (1-48)||(24253517-24253564)
chr5 (1-50)||(29789293-29789342)
chr5 (1-49)||(35626173-35626221)
chr5 (1-49)||(43262182-43262230)
chr5 (131-202)||(2414355-2414426)
chr5 (1-48)||(12648932-12648979)
chr5 (1-48)||(27501055-27501102)
chr5 (1-48)||(31939032-31939079)
chr5 (1-48)||(34451385-34451432)
chr5 (1-48)||(43326379-43326426)
chr5 (140-206)||(26303557-26303622)
chr5 (1-47)||(27278474-27278520)
chr5 (4-54)||(40886022-40886072)
chr5 (1-50)||(1402503-1402552)
chr5 (5-46)||(6901938-6901979)
chr5 (4-49)||(7722187-7722232)
chr5 (1-50)||(28424793-28424842)
chr5 (1-50)||(33617709-33617758)
chr5 (1-49)||(739703-739751)
chr5 (1-49)||(3466680-3466728)
chr5 (1-49)||(27390721-27390769)
chr5 (1-48)||(27939032-27939080)
chr5 (1-48)||(2484292-2484339)
chr5 (1-48)||(5185107-5185154)
chr5 (1-48)||(31293989-31294036)
chr5 (1-47)||(15398483-15398529)
chr5 (1-50)||(40687022-40687071)
chr5 (6-50)||(612755-612799)
chr5 (1-49)||(25831655-25831703)
chr5 (5-49)||(39932718-39932762)
[»] chr1 (63 HSPs)
chr1 (106-206)||(14938998-14939098)
chr1 (106-206)||(14944242-14944342)
chr1 (106-205)||(14949015-14949114)
chr1 (111-206)||(18527044-18527139)
chr1 (1-50)||(6327546-6327595)
chr1 (135-206)||(49251281-49251352)
chr1 (4-53)||(23932504-23932553)
chr1 (1-50)||(23984890-23984939)
chr1 (1-50)||(26524887-26524936)
chr1 (1-50)||(31308136-31308185)
chr1 (1-50)||(33073335-33073384)
chr1 (1-50)||(44662105-44662154)
chr1 (140-204)||(50616279-50616343)
chr1 (140-204)||(50624107-50624171)
chr1 (1-48)||(3611271-3611318)
chr1 (1-48)||(25058823-25058870)
chr1 (1-48)||(27983603-27983650)
chr1 (1-48)||(33187458-33187505)
chr1 (1-52)||(42313357-42313408)
chr1 (1-48)||(45538288-45538335)
chr1 (1-48)||(49398988-49399035)
chr1 (1-50)||(2954979-2955028)
chr1 (1-50)||(4808780-4808829)
chr1 (1-50)||(17994949-17994998)
chr1 (1-54)||(38331853-38331906)
chr1 (1-46)||(43251846-43251891)
chr1 (4-48)||(36566468-36566512)
chr1 (1-49)||(38790196-38790244)
chr1 (1-49)||(39646703-39646751)
chr1 (1-49)||(41999950-41999998)
chr1 (1-48)||(13312531-13312578)
chr1 (1-48)||(21139412-21139459)
chr1 (1-48)||(25678259-25678306)
chr1 (1-48)||(26085398-26085445)
chr1 (1-48)||(26277312-26277359)
chr1 (1-48)||(37620192-37620239)
chr1 (1-48)||(47671721-47671768)
chr1 (1-52)||(48373630-48373681)
chr1 (131-177)||(42105672-42105718)
chr1 (1-42)||(4068689-4068730)
chr1 (1-50)||(5981305-5981354)
chr1 (1-50)||(10928191-10928240)
chr1 (5-50)||(26685984-26686029)
chr1 (5-50)||(31040848-31040893)
chr1 (5-54)||(35273735-35273784)
chr1 (1-49)||(33884223-33884271)
chr1 (1-49)||(33959981-33960029)
chr1 (1-49)||(50774352-50774400)
chr1 (5-48)||(1388601-1388644)
chr1 (140-206)||(1547703-1547772)
chr1 (4-47)||(3285539-3285582)
chr1 (1-48)||(24245025-24245072)
chr1 (1-44)||(26794439-26794482)
chr1 (11-50)||(31844818-31844857)
chr1 (1-48)||(38716247-38716294)
chr1 (1-48)||(48683330-48683377)
chr1 (5-48)||(51057210-51057253)
chr1 (1-48)||(52324063-52324110)
chr1 (4-50)||(24885639-24885685)
chr1 (1-50)||(49253973-49254022)
chr1 (1-49)||(4156529-4156577)
chr1 (5-49)||(5961266-5961310)
chr1 (1-49)||(46616684-46616732)
[»] chr7 (42 HSPs)
chr7 (115-206)||(36718967-36719057)
chr7 (116-206)||(3868180-3868270)
chr7 (1-51)||(36389492-36389542)
chr7 (1-50)||(17855564-17855613)
chr7 (1-50)||(46913247-46913296)
chr7 (1-48)||(25893917-25893964)
chr7 (1-52)||(26579713-26579764)
chr7 (1-47)||(33393453-33393499)
chr7 (1-47)||(33423276-33423322)
chr7 (115-193)||(36718244-36718322)
chr7 (1-51)||(47066974-47067024)
chr7 (1-50)||(35767610-35767659)
chr7 (1-50)||(40670699-40670748)
chr7 (5-54)||(45482798-45482847)
chr7 (1-50)||(46898014-46898063)
chr7 (1-53)||(33839710-33839762)
chr7 (1-49)||(35328068-35328116)
chr7 (1-49)||(35356024-35356072)
chr7 (1-49)||(37846015-37846063)
chr7 (1-49)||(44003369-44003417)
chr7 (1-48)||(22979647-22979694)
chr7 (1-48)||(23393051-23393098)
chr7 (1-48)||(33695821-33695868)
chr7 (3-50)||(35757018-35757065)
chr7 (1-48)||(45690097-45690144)
chr7 (1-48)||(47740331-47740378)
chr7 (1-50)||(2341659-2341709)
chr7 (4-50)||(49171360-49171406)
chr7 (5-50)||(33332928-33332973)
chr7 (1-49)||(10618427-10618475)
chr7 (1-48)||(7257506-7257553)
chr7 (4-48)||(10028627-10028673)
chr7 (5-48)||(20165814-20165857)
chr7 (1-48)||(27018252-27018299)
chr7 (9-48)||(29446981-29447020)
chr7 (1-48)||(43499621-43499668)
chr7 (1-48)||(48609677-48609724)
chr7 (1-51)||(35752031-35752081)
chr7 (5-50)||(5183823-5183868)
chr7 (1-50)||(31586984-31587033)
chr7 (1-50)||(37443600-37443649)
chr7 (1-49)||(30076526-30076574)
[»] chr2 (38 HSPs)
chr2 (113-205)||(35413577-35413669)
chr2 (1-50)||(34518501-34518550)
chr2 (1-50)||(4034726-4034775)
chr2 (1-50)||(17600970-17601019)
chr2 (1-50)||(27024549-27024598)
chr2 (1-48)||(746600-746647)
chr2 (1-56)||(1091943-1091998)
chr2 (1-48)||(11185106-11185153)
chr2 (1-48)||(45371124-45371171)
chr2 (1-47)||(39103170-39103216)
chr2 (1-50)||(6594456-6594505)
chr2 (5-49)||(27651033-27651077)
chr2 (1-49)||(40635352-40635400)
chr2 (1-48)||(10244582-10244629)
chr2 (1-48)||(23901913-23901960)
chr2 (1-48)||(26710479-26710526)
chr2 (1-48)||(27400537-27400584)
chr2 (1-48)||(38997235-38997282)
chr2 (1-55)||(6430607-6430661)
chr2 (2-48)||(11159756-11159802)
chr2 (3-48)||(14697537-14697582)
chr2 (5-50)||(21734898-21734943)
chr2 (5-50)||(32856434-32856479)
chr2 (1-50)||(44481951-44482000)
chr2 (4-48)||(5726266-5726310)
chr2 (5-45)||(10424733-10424773)
chr2 (1-49)||(14660580-14660628)
chr2 (1-49)||(37255336-37255384)
chr2 (1-48)||(447633-447680)
chr2 (1-48)||(4609760-4609807)
chr2 (1-48)||(13815218-13815265)
chr2 (1-52)||(25294969-25295020)
chr2 (1-48)||(28641292-28641339)
chr2 (4-50)||(7892686-7892732)
chr2 (1-50)||(2324887-2324936)
chr2 (1-49)||(9444824-9444875)
chr2 (1-50)||(33427645-33427694)
chr2 (149-193)||(16215994-16216038)
[»] chr4 (74 HSPs)
chr4 (114-199)||(28910934-28911019)
chr4 (115-206)||(46258542-46258633)
chr4 (116-206)||(46029738-46029828)
chr4 (1-50)||(19387686-19387735)
chr4 (1-50)||(34276682-34276731)
chr4 (1-52)||(237612-237663)
chr4 (116-191)||(7982763-7982838)
chr4 (1-48)||(9997931-9997978)
chr4 (1-48)||(54086543-54086590)
chr4 (1-48)||(54574940-54574987)
chr4 (4-50)||(3692208-3692254)
chr4 (1-47)||(6020063-6020109)
chr4 (1-47)||(33049016-33049062)
chr4 (5-50)||(22618512-22618557)
chr4 (5-50)||(31070072-31070117)
chr4 (1-50)||(34835301-34835350)
chr4 (5-50)||(38591803-38591848)
chr4 (1-50)||(42765840-42765889)
chr4 (1-50)||(47662100-47662149)
chr4 (1-50)||(48657953-48658002)
chr4 (1-50)||(53461814-53461863)
chr4 (1-45)||(6285442-6285486)
chr4 (4-48)||(9798603-9798647)
chr4 (1-53)||(23437727-23437779)
chr4 (1-49)||(31914332-31914380)
chr4 (1-49)||(39077680-39077728)
chr4 (1-49)||(42085342-42085390)
chr4 (1-49)||(43471694-43471742)
chr4 (1-48)||(21366609-21366656)
chr4 (1-48)||(26091258-26091305)
chr4 (1-48)||(29478495-29478542)
chr4 (1-48)||(35595822-35595869)
chr4 (1-48)||(41560463-41560510)
chr4 (1-48)||(44984896-44984943)
chr4 (5-47)||(32366661-32366703)
chr4 (1-55)||(48654955-48655009)
chr4 (5-55)||(54715163-54715213)
chr4 (1-46)||(397537-397582)
chr4 (1-50)||(2243593-2243642)
chr4 (1-50)||(29777255-29777304)
chr4 (5-50)||(36532828-36532873)
chr4 (1-46)||(41702461-41702506)
chr4 (7-48)||(42033316-42033357)
chr4 (1-50)||(43891052-43891101)
chr4 (1-50)||(48259702-48259750)
chr4 (1-50)||(50234135-50234184)
chr4 (1-49)||(2826681-2826728)
chr4 (1-49)||(3170761-3170809)
chr4 (4-48)||(31532135-31532179)
chr4 (1-49)||(38547600-38547648)
chr4 (4-48)||(48313693-48313737)
chr4 (1-49)||(55056258-55056306)
chr4 (1-48)||(573927-573974)
chr4 (1-48)||(27872703-27872750)
chr4 (1-48)||(31972336-31972383)
chr4 (1-44)||(35446640-35446683)
chr4 (1-48)||(41949519-41949566)
chr4 (1-48)||(47344791-47344838)
chr4 (1-44)||(50534766-50534809)
chr4 (1-44)||(50536628-50536671)
chr4 (5-48)||(55519966-55520009)
chr4 (1-50)||(1662259-1662308)
chr4 (1-50)||(6371247-6371296)
chr4 (5-50)||(14017374-14017419)
chr4 (1-50)||(45797614-45797663)
chr4 (5-50)||(46720156-46720201)
chr4 (1-50)||(47812030-47812079)
chr4 (7-48)||(49881059-49881100)
chr4 (6-47)||(53834055-53834096)
chr4 (1-50)||(55776179-55776228)
chr4 (1-50)||(55840357-55840406)
chr4 (5-49)||(14335100-14335144)
chr4 (133-201)||(42733609-42733677)
chr4 (131-199)||(47806536-47806603)
[»] chr8 (34 HSPs)
chr8 (1-51)||(32984074-32984124)
chr8 (1-50)||(12033065-12033114)
chr8 (1-49)||(4447294-4447342)
chr8 (3-51)||(9303571-9303619)
chr8 (1-48)||(10646258-10646305)
chr8 (103-193)||(16939095-16939185)
chr8 (5-50)||(9013822-9013867)
chr8 (1-50)||(31336229-31336278)
chr8 (1-50)||(33730639-33730688)
chr8 (1-50)||(33981661-33981710)
chr8 (1-50)||(41232081-41232130)
chr8 (114-206)||(8790539-8790631)
chr8 (1-53)||(41654030-41654082)
chr8 (1-48)||(24079901-24079948)
chr8 (1-48)||(40435153-40435200)
chr8 (1-48)||(41981603-41981650)
chr8 (1-47)||(37301326-37301372)
chr8 (1-50)||(3211329-3211378)
chr8 (1-54)||(13356114-13356167)
chr8 (1-50)||(17718720-17718769)
chr8 (4-49)||(43328845-43328890)
chr8 (4-48)||(3904214-3904258)
chr8 (1-50)||(13760644-13760695)
chr8 (9-48)||(9734396-9734435)
chr8 (5-48)||(10378437-10378480)
chr8 (5-48)||(37420079-37420122)
chr8 (1-47)||(22878526-22878572)
chr8 (5-46)||(32114388-32114429)
chr8 (1-50)||(33896841-33896890)
chr8 (1-50)||(37956556-37956605)
chr8 (1-49)||(5946182-5946230)
chr8 (1-49)||(6366121-6366169)
chr8 (1-49)||(25186034-25186082)
chr8 (4-44)||(31830959-31830999)
[»] chr3 (54 HSPs)
chr3 (4-50)||(32234396-32234442)
chr3 (1-50)||(38416722-38416771)
chr3 (1-50)||(39634570-39634619)
chr3 (1-50)||(47257928-47257977)
chr3 (1-49)||(25353678-25353726)
chr3 (1-49)||(48739232-48739280)
chr3 (113-188)||(13618707-13618782)
chr3 (1-48)||(22399231-22399278)
chr3 (1-52)||(40130955-40131006)
chr3 (1-48)||(40643935-40643982)
chr3 (1-48)||(44222964-44223011)
chr3 (3-50)||(47809594-47809641)
chr3 (1-50)||(7855112-7855161)
chr3 (1-50)||(42291977-42292026)
chr3 (1-50)||(43612045-43612094)
chr3 (4-48)||(28048392-28048436)
chr3 (1-57)||(49330172-49330228)
chr3 (6-50)||(52864629-52864673)
chr3 (1-53)||(55380109-55380161)
chr3 (5-48)||(24100421-24100464)
chr3 (1-48)||(37324676-37324723)
chr3 (1-51)||(30251498-30251548)
chr3 (1-51)||(35594256-35594306)
chr3 (4-46)||(48609861-48609903)
chr3 (4-49)||(40804509-40804554)
chr3 (1-50)||(41216590-41216639)
chr3 (1-50)||(46126122-46126170)
chr3 (1-50)||(49130702-49130751)
chr3 (5-49)||(2666139-2666183)
chr3 (1-49)||(40419970-40420018)
chr3 (1-48)||(5560025-5560072)
chr3 (1-48)||(37313534-37313581)
chr3 (1-48)||(50731914-50731961)
chr3 (1-48)||(50780895-50780942)
chr3 (1-48)||(51102378-51102425)
chr3 (4-50)||(41293317-41293363)
chr3 (1-47)||(43021850-43021896)
chr3 (1-47)||(51170034-51170080)
chr3 (5-47)||(55453245-55453287)
chr3 (1-50)||(7755305-7755354)
chr3 (8-49)||(18947045-18947086)
chr3 (1-50)||(20754391-20754440)
chr3 (5-50)||(33550465-33550510)
chr3 (5-46)||(43260841-43260882)
chr3 (1-46)||(48546842-48546887)
chr3 (5-50)||(52638981-52639026)
chr3 (1-50)||(53115571-53115620)
chr3 (1-46)||(53832486-53832531)
chr3 (1-50)||(53943586-53943634)
chr3 (1-50)||(55000176-55000225)
chr3 (1-49)||(27066977-27067025)
chr3 (1-49)||(29625826-29625874)
chr3 (1-49)||(35748310-35748358)
chr3 (6-50)||(44806824-44806868)
[»] chr6 (27 HSPs)
chr6 (114-199)||(4171173-4171258)
chr6 (1-50)||(5882641-5882690)
chr6 (1-50)||(26377202-26377251)
chr6 (1-50)||(34527860-34527909)
chr6 (4-48)||(8615378-8615422)
chr6 (1-49)||(11988973-11989021)
chr6 (1-49)||(24168226-24168274)
chr6 (1-48)||(22551061-22551108)
chr6 (134-199)||(4226789-4226854)
chr6 (1-50)||(22341786-22341835)
chr6 (1-48)||(959904-959951)
chr6 (1-48)||(7167706-7167753)
chr6 (1-44)||(14891383-14891426)
chr6 (5-48)||(28947226-28947269)
chr6 (1-50)||(7393584-7393633)
chr6 (1-50)||(19415531-19415580)
chr6 (1-49)||(1970846-1970894)
chr6 (1-48)||(18101495-18101542)
chr6 (1-48)||(33452572-33452619)
chr6 (7-50)||(34262360-34262403)
chr6 (1-51)||(2593849-2593899)
chr6 (1-46)||(2892323-2892368)
chr6 (5-50)||(5294799-5294844)
chr6 (5-50)||(5299351-5299396)
chr6 (1-49)||(10507907-10507955)
chr6 (1-49)||(15965557-15965605)
chr6 (142-206)||(16914291-16914355)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-52)||(39552-39603)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-51)||(278143-278193)
scaffold0007 (1-49)||(176789-176837)
[»] scaffold0076 (1 HSPs)
scaffold0076 (5-50)||(13760-13805)
[»] scaffold0949 (1 HSPs)
scaffold0949 (1-48)||(2004-2051)
[»] scaffold0429 (1 HSPs)
scaffold0429 (1-48)||(4596-4643)
[»] scaffold0372 (1 HSPs)
scaffold0372 (1-48)||(11133-11180)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-48)||(20477-20524)
[»] scaffold0198 (1 HSPs)
scaffold0198 (7-50)||(18852-18895)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-48)||(14868-14915)


Alignment Details
Target: chr5 (Bit Score: 159; Significance: 8e-85; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 47 - 225
Target Start/End: Complemental strand, 27179279 - 27179101
Alignment:
Q  47 ccttgtttctattacgataaaacaatttatatttcaatgttacttaactaattaattatttaaattatgagattaatcagaacggactgacaatgtaaaa 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  27179279 ccttgtttctattacgataaaacaatttatatttcaatgttacttaactaattaattatttaaatcatgagattaatcaaaacggactgacaatgtaaaa 27179180  T
Q  147 caattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaatattcacctgttttatctg 225  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  27179179 taattttacactatcaactaattaaaatcattcaattagatacatcaacttaagtgttaatattcacctattttatctg 27179101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38637957 - 38637899
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgtttctatt 59  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||| ||||||||    
T  38637957 ttggggtaaattacccacaatttttccatgggtaccctagttgtcaccttttttctatt 38637899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 23074812 - 23074872
Alignment:
Q  131 gactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacat 191  Q
    |||||| ||||||||||||||||||| ||||||| |||||||||||  |||||||||||||    
T  23074812 gactgagaatgtaaaacaattttacattatcaaccaattaaaatcacccaattagacacat 23074872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 43230072 - 43230128
Alignment:
Q  150 ttttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    |||||||||||||||||||||||||||||   | |||||||||||||||||||||||    
T  43230072 ttttacactatcaactaattaaaatcattttttaagacacatcaacttaagtgttaa 43230128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24253517 - 24253564
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  24253517 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 24253564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29789342 - 29789293
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  29789342 ttgggataaattacccaccattcttccatgggtaccctagttgtcacctt 29789293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35626173 - 35626221
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||    
T  35626173 ttggggtaaattacccaccattcttccatgggtactctagttgtcacct 35626221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43262230 - 43262182
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||  |||||||||||||| |||||||||||||||    
T  43262230 ttggggtaaattacccatcattcttccatgggtaccctagttgtcacct 43262182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 2414426 - 2414355
Alignment:
Q  131 gactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtg 202  Q
    |||||||| ||||||| || |||||| | ||||| ||||||||||||||||||| |||| ||| ||||||||    
T  2414426 gactgacagtgtaaaataagtttacattgtcaaccaattaaaatcattcaattaaacacctcatcttaagtg 2414355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12648932 - 12648979
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||    
T  12648932 ttggggtaaattacccaccattcttccatggataccctagttgtcacc 12648979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27501102 - 27501055
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||    
T  27501102 ttggggtaaattacccatcattcttccatgggtaccctagttgtcacc 27501055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31939032 - 31939079
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  31939032 ttggggtaaattacccaccattcttccatgggtaccctaattgtcacc 31939079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34451385 - 34451432
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||    
T  34451385 ttggggtaaattacccaccattcttccatggataccctagttgtcacc 34451432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43326426 - 43326379
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  43326426 ttggggtaaattacccaccattcttccatgggtaccctagttggcacc 43326379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 26303622 - 26303557
Alignment:
Q  140 tgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    |||||||||| ||||||| |||||||| ||||| |||||||||||||||| || | |||||||||||    
T  26303622 tgtaaaacaactttacaccatcaactagttaaattcattcaattagacacgtc-atttaagtgttaa 26303557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27278520 - 27278474
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||    
T  27278520 ttggggtaaattacccaccattcttccataggtaccctagttgtcac 27278474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 40886072 - 40886022
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcaccttgttt 54  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||| |||||    
T  40886072 gggtaaattacccaccattcttccatgggtaccctagttttcaccatgttt 40886022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1402552 - 1402503
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||| |||||||||| |||||||| |||||||    
T  1402552 ttggggtaaattacccaccatttttccatgggtaccctagttatcacctt 1402503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 6901938 - 6901979
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  6901938 ggtaaattacccaccattcttccatgggtaccctagttgtca 6901979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 7722187 - 7722232
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  7722187 gggtaaattacccaccattcttccatgggtaccctaattgtcacct 7722232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28424842 - 28424793
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||| | | ||||||||||||||    
T  28424842 ttggggtaaattacccaccattcttccatggatactctagttgtcacctt 28424793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33617709 - 33617758
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||| ||||||||||| || ||||||||||||||||    
T  33617709 ttggggtaaattactcaccattcttccatgagtaccctagttgtcacctt 33617758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 739751 - 739703
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||| |||||||||||| ||||||| |||||| |||||||||||||||    
T  739751 ttgggataaattacccaccattcttctatgggtaccctagttgtcacct 739703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3466728 - 3466680
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| ||||||  |||||| |||||||||||||||    
T  3466728 ttggggtaaattacccaccattcttttatgggtaccctagttgtcacct 3466680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27390721 - 27390769
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||||| |||| ||||||||||| || |||||||||||||||    
T  27390721 ttggggtaaattatccaccattcttccatgagtaccctagttgtcacct 27390769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27939032 - 27939080
Alignment:
Q  1 ttggggtaaattacccactattcttccatggg-tcccctagttgtcacc 48  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  27939032 ttggggtaaattacccaccattcttccatgggttaccctagttgtcacc 27939080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2484339 - 2484292
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||| ||||||||||||| ||||||||||||||  |||||||||||||    
T  2484339 ttggagtaaattacccaccattcttccatgggtatcctagttgtcacc 2484292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5185107 - 5185154
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||| ||| ||||||||||||||  |||||||||||||    
T  5185107 ttggggtaaattactcaccattcttccatgggtatcctagttgtcacc 5185154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31294036 - 31293989
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||| ||||||||||||| |||||| ||||||| ||||||||||||||    
T  31294036 ttggagtaaattacccaccattcttacatgggtaccctagttgtcacc 31293989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15398529 - 15398483
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||||||| |||||||||| ||| | |||||||||||    
T  15398529 ttggggtaaattacccaccattcttccataggtactctagttgtcac 15398483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40687022 - 40687071
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||| |||||| ||| ||||| ||||||||||    
T  40687022 ttggggtaaattacccaccatttttccataggtaccctaattgtcacctt 40687071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 612799 - 612755
Alignment:
Q  6 gtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||| || |||||||||||||||  |||||||||||||||    
T  612799 gtaaattactcagtattcttccatgggtatcctagttgtcacctt 612755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25831655 - 25831703
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||| ||||||| || || |||||||||    
T  25831655 ttggggtaaattacccaccattctttcatgggtaccttatttgtcacct 25831703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 39932718 - 39932762
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||| || |||||||||||||| | |||||||||||||    
T  39932718 ggtaaattaccaaccattcttccatgggtactctagttgtcacct 39932762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 14938998 - 14939098
Alignment:
Q  106 ttaaattatgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgtta 205  Q
    |||||| | ||||||||| ||||  ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  14938998 ttaaataaagagattaattagaatagatcgacaatgtaaaacaattttacactatcaactaattaaaatcatacaattagacacattatcttaagtgtta 14939097  T
Q  206 a 206  Q
    |    
T  14939098 a 14939098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 14944242 - 14944342
Alignment:
Q  106 ttaaattatgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgtta 205  Q
    |||||| | ||||||||| ||||  ||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||    
T  14944242 ttaaataaagagattaattagaatagatcgacaatgtaaaacaattttacactatcaactaattaaaatcatacaattagacacattatcttaagtgtta 14944341  T
Q  206 a 206  Q
    |    
T  14944342 a 14944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 14949015 - 14949114
Alignment:
Q  106 ttaaattatgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgtta 205  Q
    |||||| | ||||||||| | ||  ||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  14949015 ttaaataaagagattaattaaaatagaccgacaaagtaaaacaattttacattatcaactaattaaaatcatacaattagacacatcatcttaagtgtta 14949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 18527044 - 18527139
Alignment:
Q  111 ttatgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    ||||||||||||| ||||  |||| ||| ||  |||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  18527044 ttatgagattaattagaatagactaacagtgcgaaacaactttacactatcaaccaattaaaatcattcaattagacacatcatcttaagtgttaa 18527139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6327595 - 6327546
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6327595 ttggggtaaattacccactattcttccatgggtaccctagttgtcacctt 6327546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 49251352 - 49251281
Alignment:
Q  135 gacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    |||||| |||||||| |||||||||||||| |||||| ||| | ||||||||||||||| ||||||||||||    
T  49251352 gacaatataaaacaactttacactatcaaccaattaacatcgtccaattagacacatcatcttaagtgttaa 49251281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 23932553 - 23932504
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcaccttgtt 53  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  23932553 gggtaaattacccaccattcttccatgggtaccctagttgtcaccttgtt 23932504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23984890 - 23984939
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  23984890 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 23984939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26524936 - 26524887
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  26524936 ttggggtaaattacccactattcttccatggataccctagttgtcacctt 26524887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31308136 - 31308185
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  31308136 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 31308185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33073335 - 33073384
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  33073335 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 33073384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44662105 - 44662154
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  44662105 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 44662154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 50616343 - 50616279
Alignment:
Q  140 tgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgtt 204  Q
    |||||||||| |||||||||||||| ||||||||||||  |||||||||||||  ||||||||||    
T  50616343 tgtaaaacaactttacactatcaaccaattaaaatcatcaaattagacacatcgtcttaagtgtt 50616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 50624171 - 50624107
Alignment:
Q  140 tgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgtt 204  Q
    |||||||||| |||||||||||||| ||||||||||||  |||||||||||||  ||||||||||    
T  50624171 tgtaaaacaactttacactatcaaccaattaaaatcatcaaattagacacatcgtcttaagtgtt 50624107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3611271 - 3611318
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  3611271 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 3611318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25058823 - 25058870
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  25058823 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 25058870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27983650 - 27983603
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  27983650 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 27983603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33187458 - 33187505
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  33187458 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 33187505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 42313408 - 42313357
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgt 52  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  42313408 ttggggtaaattacccaccattcttccatgagtaccctagttgtcaccttgt 42313357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45538288 - 45538335
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  45538288 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 45538335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49399035 - 49398988
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||    
T  49399035 ttggggtaaattacccactattcttccatgggtatcctagttgtcacc 49398988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2954979 - 2955028
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  2954979 ttggggtaaattacccaccatttttccatgggtaccctagttgtcacctt 2955028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4808780 - 4808829
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  4808780 ttggggtaaattacccaccattcttccatggataccctagttgtcacctt 4808829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17994998 - 17994949
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  17994998 ttggggtaaattacccaccattcttccatgggtaccctagttggcacctt 17994949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38331906 - 38331853
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgttt 54  Q
    ||||| |||||||||||| |||||||||||||| | ||||||||||||||||||    
T  38331906 ttgggataaattacccaccattcttccatgggtactctagttgtcaccttgttt 38331853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43251846 - 43251891
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  43251846 ttggggtaaattacccaccattcttccatgggtaccctagttgtca 43251891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 36566468 - 36566512
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||    
T  36566468 gggtaaattacccaccattcttccatgggtaccctagttgtcacc 36566512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38790244 - 38790196
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  38790244 ttgggataaattacccaccattcttccatgggtaccctagttgtcacct 38790196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39646703 - 39646751
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  39646703 ttggggtaaattatccaccattcttccatgggtaccctagttgtcacct 39646751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41999950 - 41999998
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  41999950 ttggggtaaattacccaccattcttccatgggtaccctagttatcacct 41999998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13312578 - 13312531
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  13312578 ttggggtaaattacccaccattcttctatgggtaccctagttgtcacc 13312531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21139459 - 21139412
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  21139459 ttggggtaaattacccaccattcttccataggtaccctagttgtcacc 21139412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25678306 - 25678259
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| || |||||||||||    
T  25678306 ttggggtaaattacccaccattcttccatgggtaccatagttgtcacc 25678259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26085445 - 26085398
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  26085445 ttgggataaattacccaccattcttccatgggtaccctagttgtcacc 26085398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26277312 - 26277359
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  26277312 ttgggataaattacccaccattcttccatgggtaccctagttgtcacc 26277359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37620239 - 37620192
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||||    
T  37620239 ttggggtaaattacccaccattcttccatgtgtaccctagttgtcacc 37620192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 47671721 - 47671768
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||    
T  47671721 ttggggtaaattacccatcattcttccatgggtaccctagttgtcacc 47671768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 48373630 - 48373681
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgt 52  Q
    |||||||||||||||||| |||||||||||| | || |||||||||||||||    
T  48373630 ttggggtaaattacccaccattcttccatggataccttagttgtcaccttgt 48373681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 42105672 - 42105718
Alignment:
Q  131 gactgacaatgtaaaacaattttacactatcaactaattaaaatcat 177  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  42105672 gactgacaatgtaaaacaagtttacactgtcaaccaattaaaatcat 42105718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4068730 - 4068689
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagtt 42  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  4068730 ttggggtaaattacccaccattcttccatgggtaccctagtt 4068689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5981305 - 5981354
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||| |||||||| |||| |||||||||||||| ||||||||||||||||    
T  5981305 ttggagtaaattatccaccattcttccatgggtaccctagttgtcacctt 5981354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10928191 - 10928240
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||  | ||||||||||||||||    
T  10928191 ttggggtaaattacccaccattcttccatgaataccctagttgtcacctt 10928240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 26685984 - 26686029
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  26685984 ggtaaattacccaccatttttccatgggtaccctagttgtcacctt 26686029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 31040848 - 31040893
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  31040848 ggtaaattacccaccattattccatgggtaccctagttgtcacctt 31040893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 35273735 - 35273784
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcaccttgttt 54  Q
    |||||||||| ||| |||||||||||||| |||||||||||||| |||||    
T  35273735 ggtaaattacacaccattcttccatgggtaccctagttgtcaccatgttt 35273784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33884223 - 33884271
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| ||| |||||||||| ||||| |||||||||    
T  33884223 ttggggtaaattacccaccatttttccatgggtaccctaattgtcacct 33884271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33960029 - 33959981
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| ||| |||||||||| ||||| |||||||||    
T  33960029 ttggggtaaattacccaccatttttccatgggtaccctaattgtcacct 33959981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50774352 - 50774400
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||| ||||||||||||  ||||||||||||| |||||||||||||||    
T  50774352 ttgggataaattacccacctttcttccatgggtaccctagttgtcacct 50774400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 1388601 - 1388644
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||    
T  1388601 ggtaaattacccaccatttttccatgggtaccctagttgtcacc 1388644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 1547703 - 1547772
Alignment:
Q  140 tgtaaaacaattttacactatcaactaattaaaatcattca---attagacacatcaacttaagtgttaa 206  Q
    |||||||||| |||||||||||||  ||||||||||| |||   ||||| ||| ||||||||||||||||    
T  1547703 tgtaaaacaactttacactatcaatcaattaaaatcactcaattattagccacttcaacttaagtgttaa 1547772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 3285539 - 3285582
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||    
T  3285539 gggtaaattacccaccattcttccatgggtaccctaattgtcac 3285582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24245072 - 24245025
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||| |||| |||||||||||||| |||||||| |||||    
T  24245072 ttggggtaaattatccaccattcttccatgggtaccctagttatcacc 24245025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26794439 - 26794482
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgt 44  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||    
T  26794439 ttggggtaaattactcaccattcttccatgggtaccctagttgt 26794482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 31844818 - 31844857
Alignment:
Q  11 ttacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  31844818 ttacccaccattcttccatgggtaccctagttgtcacctt 31844857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38716294 - 38716247
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| ||| |||||||||| |||| |||||||||    
T  38716294 ttggggtaaattacccaccatttttccatgggtacccttgttgtcacc 38716247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48683377 - 48683330
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||| |||||||||||| ||| |||||||||| ||||||||||||||    
T  48683377 ttgggataaattacccaccatttttccatgggtaccctagttgtcacc 48683330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 51057210 - 51057253
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||| |||| |||||||||||||| ||||||||||||||    
T  51057210 ggtaaattatccaccattcttccatgggtaccctagttgtcacc 51057253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 52324063 - 52324110
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||| ||||||||||||| | |||||||||||| ||||||||||||||    
T  52324063 ttggagtaaattacccaccaatcttccatgggtaccctagttgtcacc 52324110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 24885639 - 24885685
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||| |||||||||||  | ||||||||||||||||    
T  24885639 gggtaaattacccaccattcttccatgaataccctagttgtcacctt 24885685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49254022 - 49253973
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||| | ||||| || |||||||    
T  49254022 ttggggtaaattacccaccattcttccatggataccctaattatcacctt 49253973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4156529 - 4156577
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||  ||| |||||||||| | |||||||||||||    
T  4156529 ttggggtaaattacccatcatttttccatgggtactctagttgtcacct 4156577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 5961310 - 5961266
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||  ||| |||||||||| |||||||||||||||    
T  5961310 ggtaaattacccatcatttttccatgggtaccctagttgtcacct 5961266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46616684 - 46616732
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||||| |||| |||||||||||||| | |||| ||||||||    
T  46616684 ttggggtaaattatccaccattcttccatgggtactctaggtgtcacct 46616732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 36719057 - 36718967
Alignment:
Q  115 gagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    ||||||||| ||||  |||||||| |||||||||||||||||| |||||| ||||||| |||| ||||||||||||||| ||||||||||||    
T  36719057 gagattaattagaatagactgaca-tgtaaaacaattttacaccatcaaccaattaaattcatccaattagacacatcatcttaagtgttaa 36718967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 3868180 - 3868270
Alignment:
Q  116 agattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    |||||||| ||||  |||||||| |||||||||||||| |||||||||| |||||||||||   ||||| |||||||| ||||||| ||||    
T  3868180 agattaattagaatagactgacagtgtaaaacaattttgcactatcaaccaattaaaatcaccaaattaaacacatcatcttaagtattaa 3868270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36389492 - 36389542
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttg 51  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  36389492 ttggggtaaattacccaccattcttccatgggtaccctagttgtcaccttg 36389542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17855564 - 17855613
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  17855564 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 17855613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46913247 - 46913296
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  46913247 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 46913296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25893964 - 25893917
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  25893964 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 25893917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26579764 - 26579713
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgt 52  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  26579764 ttggggtaaattacccaccattcttccatggataccctagttgtcaccttgt 26579713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33393453 - 33393499
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  33393453 ttggggtaaattacccaccattcttccatgggtaccctagttgtcac 33393499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33423322 - 33423276
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  33423322 ttggggtaaattacccaccattcttccatgggtaccctagttgtcac 33423276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 36718244 - 36718322
Alignment:
Q  115 gagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatca 193  Q
    ||||||||| ||||  |||||||| |||||||||||||||||| |||||| ||| |||  ||||||||||||| |||||    
T  36718244 gagattaattagaatagactgacattgtaaaacaattttacaccatcaaccaataaaatccattcaattagacgcatca 36718322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47067024 - 47066974
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttg 51  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  47067024 ttggggtaaattacccaccattctttcatgggtaccctagttgtcaccttg 47066974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35767610 - 35767659
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  35767610 ttggggtaaattacccaccattcttccatggataccctagttgtcacctt 35767659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40670699 - 40670748
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| || |||||||||||||    
T  40670699 ttggggtaaattacccaccattcttccatgggtaccttagttgtcacctt 40670748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 45482798 - 45482847
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcaccttgttt 54  Q
    |||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  45482798 ggtaaattacccaccattcttccatgagtaccctagttgtcaccttgttt 45482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46898063 - 46898014
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  46898063 ttggggtaaattacccaccattcttccatggataccctagttgtcacctt 46898014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33839762 - 33839710
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgtt 53  Q
    ||||||||||||| |||| |||||||||||||| || ||||||||||||||||    
T  33839762 ttggggtaaattatccaccattcttccatgggtaccttagttgtcaccttgtt 33839710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35328116 - 35328068
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  35328116 ttggggtaaattacccaccattctttcatgggtaccctagttgtcacct 35328068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35356024 - 35356072
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  35356024 ttggggtaaattacccaccattcttccatgggtatcctagttgtcacct 35356072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37846063 - 37846015
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  37846063 ttgggataaattacccaccattcttccatgggtaccctagttgtcacct 37846015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44003417 - 44003369
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  44003417 ttggggtaaattacccaccatttttccatgggtaccctagttgtcacct 44003369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22979694 - 22979647
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  22979694 ttggggtaaattacccaccattctttcatgggtaccctagttgtcacc 22979647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23393098 - 23393051
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  23393098 ttggggtaaattatccaccattcttccatgggtaccctagttgtcacc 23393051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33695868 - 33695821
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||    
T  33695868 ttggggtaaattacccaccattcttccatggataccctagttgtcacc 33695821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 35757065 - 35757018
Alignment:
Q  3 ggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  35757065 ggggtaaattactcaccattcttccatgggtaccctagttgtcacctt 35757018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 45690144 - 45690097
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  45690144 ttggggtaaattatccaccattcttccatgggtaccctagttgtcacc 45690097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47740378 - 47740331
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||    
T  47740378 ttggggtaaattacccaccattcttccatggataccctagttgtcacc 47740331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2341709 - 2341659
Alignment:
Q  1 ttggggtaaattacccactattcttccat-gggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  2341709 ttggggtaaattacccaccattcttccatggggtaccctagttgtcacctt 2341659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 49171406 - 49171360
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||| ||||||||||| || ||||||||||||||||    
T  49171406 gggtaaattacccaccattcttccatgagtaccctagttgtcacctt 49171360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 33332928 - 33332973
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||    
T  33332928 ggtaaattacccaccattctttcatgggtaccctagttgtcacctt 33332973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10618427 - 10618475
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||| |||||||||||| |||||||||||||| |||||||| ||||||    
T  10618427 ttgggataaattacccaccattcttccatgggtaccctagttatcacct 10618475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7257506 - 7257553
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  7257506 ttggggtaaattacccaccatttttctatgggtaccctagttgtcacc 7257553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 10028627 - 10028673
Alignment:
Q  4 gggtaaattacccactattcttccatggg--tcccctagttgtcacc 48  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||    
T  10028627 gggtaaattacccactattcttccatgggtataccctagttgtcacc 10028673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 20165857 - 20165814
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||| ||| |||||||||||||| ||||||||||||||    
T  20165857 ggtaaattactcaccattcttccatgggtaccctagttgtcacc 20165814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27018252 - 27018299
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||| ||||||||||||| ||||||||||||||  |||||||||||||    
T  27018252 ttggagtaaattacccaccattcttccatgggtatcctagttgtcacc 27018299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 29446981 - 29447020
Alignment:
Q  9 aattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  29446981 aattacccaccattcttccatgggtaccctagttgtcacc 29447020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43499621 - 43499668
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||| | |||||||| |||||    
T  43499621 ttggggtaaattacccaccattcttccatggataccctagttctcacc 43499668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48609724 - 48609677
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||    
T  48609724 ttggggtaaattatacaccattcttccatgggtaccctagttgtcacc 48609677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35752081 - 35752031
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttg 51  Q
    |||||||||||||||||  |||||| |||||||  ||||||||||||||||    
T  35752081 ttggggtaaattacccatcattctttcatgggtagcctagttgtcaccttg 35752031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 5183868 - 5183823
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||||||||||| || |||||||| |||||||    
T  5183868 ggtaaattacccaccattcttccatgagtaccctagttatcacctt 5183823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31586984 - 31587033
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||||||||||  || |||||||| |||||||    
T  31586984 ttggggtaaattacccaccattcttccataagtaccctagttctcacctt 31587033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37443649 - 37443600
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||| ||  |||||| ||||||||||||||||    
T  37443649 ttggggtaaattacccaccatttttttatgggtaccctagttgtcacctt 37443600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30076574 - 30076526
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||| ||||||||||||  |||||||||||| | |||||||||||||||    
T  30076574 ttggcgtaaattacccatcattcttccatggataccctagttgtcacct 30076526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 205
Target Start/End: Original strand, 35413577 - 35413669
Alignment:
Q  113 atgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgtta 205  Q
    ||||||||||| ||||  |||| ||| |||||||||| |||||||||||||| ||||||| |||| |||||| |||||||| |||||||||||    
T  35413577 atgagattaattagaatagactaacagtgtaaaacaactttacactatcaaccaattaaattcatccaattaaacacatcatcttaagtgtta 35413669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34518501 - 34518550
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34518501 ttggggtaaattacccactattcttccatgggtaccctagttgtcacctt 34518550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4034726 - 4034775
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  4034726 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 4034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17600970 - 17601019
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  17600970 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 17601019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27024549 - 27024598
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  27024549 ttggggtaaattacccattattcttccatgggtaccctagttgtcacctt 27024598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 746600 - 746647
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  746600 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 746647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1091998 - 1091943
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgtttct 56  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||| |||||    
T  1091998 ttggggtaaattacccaccatttttccatgggtaccctagttgtcaccttttttct 1091943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11185106 - 11185153
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  11185106 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 11185153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45371124 - 45371171
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  45371124 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 45371171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 39103170 - 39103216
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  39103170 ttggggtaaattacccaccattcttccatgggtaccctagttgtcac 39103216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6594505 - 6594456
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  6594505 ttggggtaaattacccaccatttttccatgggtaccctagttgtcacctt 6594456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 27651077 - 27651033
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||| |||||||||||||| |||||||||||||||    
T  27651077 ggtaaattacccaccattcttccatgggtaccctagttgtcacct 27651033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40635352 - 40635400
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  40635352 ttggggtaaattacccaccattctttcatgggtaccctagttgtcacct 40635400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10244629 - 10244582
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  10244629 ttggggtaaattacccaccattcttccataggtaccctagttgtcacc 10244582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 23901913 - 23901960
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  23901913 ttggggtaaattatccaccattcttccatgggtaccctagttgtcacc 23901960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26710479 - 26710526
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  26710479 ttggggtaaattacccaccattctttcatgggtaccctagttgtcacc 26710526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27400537 - 27400584
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  27400537 ttggggtaaattacccaccattctttcatgggtaccctagttgtcacc 27400584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 38997235 - 38997282
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||    
T  38997235 ttggggtaaattacccaccattcttccatggataccctagttgtcacc 38997282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6430607 - 6430661
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgtttc 55  Q
    |||||||||||||||||| |||||||||||||| |||||||| | ||||| ||||    
T  6430607 ttggggtaaattacccaccattcttccatgggtaccctagttattaccttatttc 6430661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 11159756 - 11159802
Alignment:
Q  2 tggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  11159756 tggggtaaattacccaccattcttctatgggtaccctagttgtcacc 11159802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 14697582 - 14697537
Alignment:
Q  3 ggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||    
T  14697582 ggggtaaattacccaccattcttctatgggtaccctagttgtcacc 14697537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 21734943 - 21734898
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||||||||||| || ||||||||||||||||    
T  21734943 ggtaaattacccaccattcttccatgagtaccctagttgtcacctt 21734898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 32856479 - 32856434
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  32856479 ggtaaattacccaccattcttccataggtaccctagttgtcacctt 32856434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44481951 - 44482000
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||| |||||||||| |||| |||||||||||    
T  44481951 ttggggtaaattacccaccatttttccatgggtaccctggttgtcacctt 44482000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 5726266 - 5726310
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||    
T  5726266 gggtaaattacccaccattcttccatggataccctagttgtcacc 5726310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 10424733 - 10424773
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtc 45  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  10424733 ggtaaattacccaccattcttccatgggtaccctagttgtc 10424773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14660580 - 14660628
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||| ||||||||||||| ||||||||||| || |||||||||||||||    
T  14660580 ttggtgtaaattacccaccattcttccatgagtaccctagttgtcacct 14660628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37255384 - 37255336
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||| |||||||||||| ||||||| |||||| |||||||||||||||    
T  37255384 ttgggataaattacccaccattcttctatgggtaccctagttgtcacct 37255336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 447680 - 447633
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||| |||||||||||| |||| ||||||||| ||||||||||||||    
T  447680 ttgggataaattacccaccattcatccatgggtaccctagttgtcacc 447633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4609760 - 4609807
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||| |||  |||||||||||||| ||||||||||||||    
T  4609760 ttggggtaaattatccaacattcttccatgggtaccctagttgtcacc 4609807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13815265 - 13815218
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||||||  ||||| ||||||| ||||||||||||||    
T  13815265 ttggggtaaattacccacctttctttcatgggtaccctagttgtcacc 13815218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25294969 - 25295020
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgt 52  Q
    |||||||||||||||||  ||||||||||| || ||||||||||| ||||||    
T  25294969 ttggggtaaattacccatcattcttccatgagtaccctagttgtccccttgt 25295020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28641339 - 28641292
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||||| ||||||| |||||||  |||||||||||||    
T  28641339 ttggggtaaattacccattattctttcatgggtagcctagttgtcacc 28641292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 7892732 - 7892686
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||| |||||||||| | | ||||||||||||||||    
T  7892732 gggtaaattacccaccattcttccatagataccctagttgtcacctt 7892686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2324936 - 2324887
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||| |||||||||||| |||||||||||  | ||||||||||||||||    
T  2324936 ttgggataaattacccaccattcttccatgaataccctagttgtcacctt 2324887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9444824 - 9444875
Alignment:
Q  1 ttggggtaaattacccac---tattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||||||||||   ||||||||||||| | |||||||||||||||    
T  9444824 ttggggtaaattacccaccattattcttccatggataccctagttgtcacct 9444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33427694 - 33427645
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||| |||||| ||||||| |||||||| |||||||    
T  33427694 ttggggtaaattacacaccattctttcatgggtaccctagttatcacctt 33427645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 16215994 - 16216038
Alignment:
Q  149 attttacactatcaactaattaaaatcattcaattagacacatca 193  Q
    |||||||| ||||||  |||||||| |||||||||||||||||||    
T  16215994 attttacattatcaatcaattaaaaccattcaattagacacatca 16216038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 28911019 - 28910934
Alignment:
Q  114 tgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaa 199  Q
    |||||||||| ||||  |||||||| |||||||||| ||||||||||||||  ||||||||||| |||||| |||||||| |||||    
T  28911019 tgagattaattagaatagactgacagtgtaaaacaaatttacactatcaaccgattaaaatcatccaattaaacacatcatcttaa 28910934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 46258633 - 46258542
Alignment:
Q  115 gagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    ||||||||| ||||  |||||||||||||||| || |||||||||||||| ||||| ||| ||   ||||||||||||| ||||||||||||    
T  46258633 gagattaattagaatagactgacaatgtaaaataactttacactatcaaccaattataattatctcattagacacatcatcttaagtgttaa 46258542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 46029738 - 46029828
Alignment:
Q  116 agattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    |||||||| ||||  ||||||| ||||||||||| |||||||||||||| ||||| ||| ||   ||||||||||||| ||||||||||||    
T  46029738 agattaattagaatagactgacgatgtaaaacaactttacactatcaaccaattataattatctcattagacacatcatcttaagtgttaa 46029828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19387735 - 19387686
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  19387735 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 19387686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34276682 - 34276731
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  34276682 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 34276731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 237612 - 237663
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgt 52  Q
    |||||||||||||||||| |||||||||||||| |||||||| |||||||||    
T  237612 ttggggtaaattacccaccattcttccatgggtaccctagttatcaccttgt 237663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 191
Target Start/End: Complemental strand, 7982838 - 7982763
Alignment:
Q  116 agattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacat 191  Q
    |||||||| ||||  ||||||||||||||||||| |||||| ||||||  |||||||||||  |||||||||||||    
T  7982838 agattaattagaatagactgacaatgtaaaacaactttacattatcaatcaattaaaatcacccaattagacacat 7982763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9997978 - 9997931
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  9997978 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 9997931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 54086543 - 54086590
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  54086543 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 54086590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 54574987 - 54574940
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  54574987 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 54574940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 3692254 - 3692208
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  3692254 gggtaaattacccaccattcttccatgggtaccctagttgtcacctt 3692208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6020063 - 6020109
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  6020063 ttggggtaaattacccaccattcttccatgggtaccctagttgtcac 6020109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33049016 - 33049062
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||    
T  33049016 ttggggtaaattacccaccattcttccatgggtaccctagttgtcac 33049062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 22618557 - 22618512
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  22618557 ggtaaattacccaccattcttccatgggtaccctagttgtcacctt 22618512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 31070117 - 31070072
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  31070117 ggtaaattacccaccattcttccatgggtaccctagttgtcacctt 31070072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34835301 - 34835350
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  34835301 ttggggtaaattacccaccatttttccatgggtaccctagttgtcacctt 34835350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 38591803 - 38591848
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  38591803 ggtaaattacccaccattcttccatgggtaccctagttgtcacctt 38591848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42765889 - 42765840
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| || |||||||||||||    
T  42765889 ttggggtaaattacccaccattcttccatgggtaccttagttgtcacctt 42765840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47662149 - 47662100
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  47662149 ttggggtaaattacccaccattcttctatgggtaccctagttgtcacctt 47662100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48657953 - 48658002
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  48657953 ttggggtaaattatccaccattcttccatgggtaccctagttgtcacctt 48658002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 53461863 - 53461814
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  53461863 ttggggtaaattacccaccattctttcatgggtaccctagttgtcacctt 53461814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6285442 - 6285486
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtc 45  Q
    |||||||||||||||||| |||||||||||||| |||||||||||    
T  6285442 ttggggtaaattacccaccattcttccatgggtaccctagttgtc 6285486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 9798603 - 9798647
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||    
T  9798603 gggtaaattacccaccattcttccatgggtaccctagttgtcacc 9798647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23437727 - 23437779
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgtt 53  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||||| ||||    
T  23437727 ttggggtaaattactcaccattcttccatgggtaccctagttgtcaccatgtt 23437779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31914332 - 31914380
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||  |||||||||||||| |||||||||||||||    
T  31914332 ttggggtaaattacccatcattcttccatgggtaccctagttgtcacct 31914380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39077680 - 39077728
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||  |||||||||||||| |||||||||||||||    
T  39077680 ttggggtaaattacccaacattcttccatgggtaccctagttgtcacct 39077728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42085342 - 42085390
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||    
T  42085342 ttggggtaaattacccaccattcttccatgggtaccatagttgtcacct 42085390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43471742 - 43471694
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||| | |||||||||||||||    
T  43471742 ttggggtaaattacccaccattcttccatggataccctagttgtcacct 43471694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21366656 - 21366609
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  21366656 ttggggtaaattatccaccattcttccatgggtaccctagttgtcacc 21366609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26091305 - 26091258
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  26091305 ttggagtaaattacccaccattcttccatgggtaccctagttgtcacc 26091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29478495 - 29478542
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  29478495 ttggggtaaattacccaccattcttccataggtaccctagttgtcacc 29478542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35595822 - 35595869
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||    
T  35595822 ttggggtaaattacccaccattcttccataggtaccctagttgtcacc 35595869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41560463 - 41560510
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||    
T  41560463 ttggggtaaattacccaccattcttccatgggtaccctagctgtcacc 41560510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44984896 - 44984943
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  44984896 ttgggataaattacccaccattcttccatgggtaccctagttgtcacc 44984943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 32366703 - 32366661
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  32366703 ggtaaattacccaccattcttccatgggtaccctagttgtcac 32366661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48654955 - 48655009
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgtttc 55  Q
    ||||||||||||||| || |||||||||||| | ||||| |||||||||||||||    
T  48654955 ttggggtaaattacctaccattcttccatggctaccctaattgtcaccttgtttc 48655009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 54715163 - 54715213
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcaccttgtttc 55  Q
    |||||||||||||| |||||||||||||| |||||||| ||||||| ||||    
T  54715163 ggtaaattacccaccattcttccatgggtaccctagttatcaccttctttc 54715213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 397537 - 397582
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||    
T  397537 ttggggtaaattacccaccattcttccatggataccctagttgtca 397582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2243593 - 2243642
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||| ||||||||||||| ||||||| |||||| ||||||||||||||||    
T  2243593 ttggagtaaattacccaccattcttctatgggtaccctagttgtcacctt 2243642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29777304 - 29777255
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||| | ||||| ||||||||||    
T  29777304 ttggggtaaattacccaccattcttccatggataccctaattgtcacctt 29777255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 36532873 - 36532828
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||    
T  36532873 ggtaaattacccaccattcttccatgggtatcctagttgtcacctt 36532828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41702506 - 41702461
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||    
T  41702506 ttggggtaaattacccaccattcttccatggataccctagttgtca 41702461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 42033316 - 42033357
Alignment:
Q  7 taaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  42033316 taaattacccaccattcttccatgggtaccctagttgtcacc 42033357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43891052 - 43891101
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||| | || |||||||||||||    
T  43891052 ttggggtaaattacccaccattcttccatggataccatagttgtcacctt 43891101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 48259750 - 48259702
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  48259750 ttggggtaaattacccaccattcttccat-ggtaccctagttgtcacctt 48259702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50234135 - 50234184
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||||||| |||| | ||||||||||||||||    
T  50234135 ttggggtaaattacccaccattcttctatggataccctagttgtcacctt 50234184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2826728 - 2826681
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  2826728 ttggggtaaattacccaccattcttccat-ggtaccctagttgtcacct 2826681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3170761 - 3170809
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||| | | |||||||||||||    
T  3170761 ttggggtaaattacccaccattcttccatggatactctagttgtcacct 3170809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 31532179 - 31532135
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||    
T  31532179 gggtaaattacccatcattcttccatgggtaccctagttgtcacc 31532135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38547648 - 38547600
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| ||| ||| |||||| |||||||||||||||    
T  38547648 ttggggtaaattacccaccatttttctatgggtaccctagttgtcacct 38547600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 48313693 - 48313737
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||    
T  48313693 gggtaaattacccaccatttttccatgggtaccctagttgtcacc 48313737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 55056306 - 55056258
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||| ||||||| |||| ||||||||||    
T  55056306 ttggggtaaattacccaccattctttcatgggtacccttgttgtcacct 55056258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 573927 - 573974
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||||||| ||||||| || | ||||||||||||    
T  573927 ttggggtaaattacccactatttttccatgagtacactagttgtcacc 573974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27872703 - 27872750
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| ||| |||||||||| || |||||||||||    
T  27872703 ttggggtaaattacccaccatttttccatgggtaccgtagttgtcacc 27872750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31972383 - 31972336
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||| ||||||| ||||| ||||||||    
T  31972383 ttggggtaaattacccaccattctttcatgggtaccctaattgtcacc 31972336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35446640 - 35446683
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgt 44  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||    
T  35446640 ttggggtaaattatccaccattcttccatgggtaccctagttgt 35446683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41949519 - 41949566
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||| ||| ||| ||||||||||||||    
T  41949519 ttggggtaaattacccaccattctttcataggtaccctagttgtcacc 41949566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 47344791 - 47344838
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||    
T  47344791 ttggggtaaattattcaccattcttccatgggtaccctagttgtcacc 47344838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50534766 - 50534809
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgt 44  Q
    |||||||||||||||||| |||||||||||||| || |||||||    
T  50534766 ttggggtaaattacccaccattcttccatgggtaccttagttgt 50534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50536671 - 50536628
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgt 44  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||    
T  50536671 ttggggtaaattacccaccattcttctatgggtaccctagttgt 50536628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 55519966 - 55520009
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||| ||||||||||||||  |||||||||||||    
T  55519966 ggtaaattacccaccattcttccatgggtatcctagttgtcacc 55520009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1662308 - 1662259
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||  |||||||||| ||| ||||||||||||||||    
T  1662308 ttggggtaaattactcatcattcttccataggtaccctagttgtcacctt 1662259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6371296 - 6371247
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||| || ||| ||| ||||||||||||||||    
T  6371296 ttggggtaaattacccaccattttttcataggtaccctagttgtcacctt 6371247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 14017419 - 14017374
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||  | |||||||||||||| ||||||||||||||||    
T  14017419 ggtaaattacctgccattcttccatgggtaccctagttgtcacctt 14017374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45797614 - 45797663
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||| ||||||||| || |||||||||| ||| ||||||||||||||||    
T  45797614 ttgggataaattacctaccattcttccataggtaccctagttgtcacctt 45797663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 46720156 - 46720201
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||| |||||||||| |||||||||| |||||    
T  46720156 ggtaaattacccaccatttttccatgggtaccctagttgttacctt 46720201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47812030 - 47812079
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||||||| |||| | ||||| ||||||||||    
T  47812030 ttggggtaaattacccaccattcttctatggataccctaattgtcacctt 47812079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 49881100 - 49881059
Alignment:
Q  7 taaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||| |||||||||||||| | ||||||||||||    
T  49881100 taaattacccaccattcttccatgggtactctagttgtcacc 49881059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 53834096 - 53834055
Alignment:
Q  6 gtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    ||||||||||||| |||||||||||| | |||||||||||||    
T  53834096 gtaaattacccaccattcttccatggataccctagttgtcac 53834055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 55776179 - 55776228
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||| |||  || ||||||||||||||||    
T  55776179 ttggggtaaattacccaccattctttcataagtaccctagttgtcacctt 55776228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 55840357 - 55840406
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||| |||  || ||||||||||||||||    
T  55840357 ttggggtaaattacccaccattctttcataagtaccctagttgtcacctt 55840406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 14335144 - 14335100
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||| |||||| ||||||| | |||||||||||||    
T  14335144 ggtaaattacccaccattctttcatgggtactctagttgtcacct 14335100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 42733609 - 42733677
Alignment:
Q  133 ctgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagt 201  Q
    |||||| |||||||  |||||||||| ||||| |||||||||||||   | |||||||||||| |||||    
T  42733609 ctgacattgtaaaattattttacactgtcaaccaattaaaatcattatttaagacacatcaacctaagt 42733677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 47806536 - 47806603
Alignment:
Q  131 gactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaa 199  Q
    ||||||||  |||||||||||| ||||  ||||| ||||||||||| ||||||| ||| ||||||||||    
T  47806536 gactgacagcgtaaaacaattt-acaccgtcaaccaattaaaatcactcaattaaacatatcaacttaa 47806603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32984124 - 32984074
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttg 51  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  32984124 ttggggtaaattacccaccattcttccatgggtaccctagttgtcaccttg 32984074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12033065 - 12033114
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  12033065 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 12033114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4447342 - 4447294
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  4447342 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacct 4447294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 9303619 - 9303571
Alignment:
Q  3 ggggtaaattacccactattcttccatgggtcccctagttgtcaccttg 51  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  9303619 ggggtaaattacccaccattcttccatgggtaccctagttgtcaccttg 9303571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10646258 - 10646305
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  10646258 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 10646305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 16939185 - 16939095
Alignment:
Q  103 tatttaaattatgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatca 193  Q
    |||||||| | |||||||||| ||||  ||  || | ||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||    
T  16939185 tatttaaactttgagattaattagaatagatcgatagtgtaaaacaattttacactgtcaaccaattaaaatcactaaattagacacatca 16939095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 9013822 - 9013867
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  9013822 ggtaaattacccaccattcttccatgggtaccctagttgtcacctt 9013867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31336229 - 31336278
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  31336229 ttggggcaaattacccaccattcttccatgggtaccctagttgtcacctt 31336278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33730688 - 33730639
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  33730688 ttggggtaaattacccaccattcttccatggataccctagttgtcacctt 33730639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33981710 - 33981661
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  33981710 ttggggtaaattacccaccattcttccataggtaccctagttgtcacctt 33981661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41232081 - 41232130
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  41232081 ttggggtaaattacccactattcctccatggataccctagttgtcacctt 41232130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 206
Target Start/End: Original strand, 8790539 - 8790631
Alignment:
Q  114 tgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    |||||||||| ||||   ||||| ||||||||| || |||||||||||||   |||| |||||  ||||||||||||||| ||||||||||||    
T  8790539 tgagattaattagaatatactgataatgtaaaataactttacactatcaatcgattagaatcacccaattagacacatcatcttaagtgttaa 8790631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41654030 - 41654082
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgtt 53  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||| ||||    
T  41654030 ttggggtaaattacccaccattctttcatgggtaccctagttgtcaccatgtt 41654082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24079948 - 24079901
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  24079948 ttggggtaaattacccaccattctttcatgggtaccctagttgtcacc 24079901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40435200 - 40435153
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||||    
T  40435200 ttggggtaaattacccaccattcttccatgagtaccctagttgtcacc 40435153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41981603 - 41981650
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||||    
T  41981603 ttggggtaaattacccaccattcttccatggataccctagttgtcacc 41981650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37301372 - 37301326
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||    
T  37301372 ttggggtaaattacccaccattctttcatgggtaccctagttgtcac 37301326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3211329 - 3211378
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||| ||||||||||||| |||||||||||||| || |||||||||||||    
T  3211329 ttggagtaaattacccaccattcttccatgggtaccatagttgtcacctt 3211378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13356167 - 13356114
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgttt 54  Q
    ||||||||||||| |||  |||||||||||||| | ||||||||||||||||||    
T  13356167 ttggggtaaattatccatcattcttccatgggtactctagttgtcaccttgttt 13356114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17718769 - 17718720
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||| ||||||||||||| |||||||||||||| |||||| |||||||||    
T  17718769 ttggagtaaattacccaccattcttccatgggtaccctagctgtcacctt 17718720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 43328845 - 43328890
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  43328845 gggtaaattacccaccattcttccatgggtaccctaattgtcacct 43328890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 3904214 - 3904258
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||    
T  3904214 gggtaaattacccaccattcttccatgggtaccctagttatcacc 3904258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13760695 - 13760644
Alignment:
Q  1 ttggggtaaattacccactattcttccatgg--gtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||||||||||||  || ||||||||||||||||    
T  13760695 ttggggtaaattacccaccattcttccatgggtgtaccctagttgtcacctt 13760644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 9734396 - 9734435
Alignment:
Q  9 aattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  9734396 aattacccaccattcttccatgggtaccctagttgtcacc 9734435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 10378437 - 10378480
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||| ||||||||||||||  |||||||||||||    
T  10378437 ggtaaattacccaccattcttccatgggtatcctagttgtcacc 10378480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 37420079 - 37420122
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||    
T  37420079 ggtaaattacccaccattcttccataggtaccctagttgtcacc 37420122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22878526 - 22878572
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    ||||||||||||| |||| ||||||| |||||| |||||||||||||    
T  22878526 ttggggtaaattatccacaattcttctatgggtaccctagttgtcac 22878572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 32114388 - 32114429
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    |||||||||||||| ||||||||||||||  |||||||||||    
T  32114388 ggtaaattacccaccattcttccatgggtatcctagttgtca 32114429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33896890 - 33896841
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||| ||||||||||||| ||| || ||||||| ||||||||||||||||    
T  33896890 ttggagtaaattacccaccattttttcatgggtaccctagttgtcacctt 33896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37956556 - 37956605
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||| || ||||| | ||||||||||||||||    
T  37956556 ttggggtaaattacccaccattatttcatggataccctagttgtcacctt 37956605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5946182 - 5946230
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||||| |||| |||||| ||| ||| |||||||||||||||    
T  5946182 ttggggtaaattatccaccattctttcataggtaccctagttgtcacct 5946230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6366121 - 6366169
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||| |||||||||||| |||||| ||||| | |||||||||||||||    
T  6366121 ttgggataaattacccaccattctttcatggataccctagttgtcacct 6366169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25186034 - 25186082
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||| ||| ||||| | |||||||    
T  25186034 ttggggtaaattacccaccattcttccataggtaccctaatcgtcacct 25186082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 31830999 - 31830959
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgt 44  Q
    |||||||||||| || |||||||||||||| ||||||||||    
T  31830999 gggtaaattacctaccattcttccatgggtaccctagttgt 31830959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 32234442 - 32234396
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  32234442 gggtaaattacccactattcttccatgggtaccctagttgtcacctt 32234396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38416771 - 38416722
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  38416771 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 38416722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39634619 - 39634570
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  39634619 ttggggtaaattacccacaattcttccatgggtaccctagttgtcacctt 39634570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47257928 - 47257977
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  47257928 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 47257977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25353678 - 25353726
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  25353678 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacct 25353726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48739280 - 48739232
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  48739280 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacct 48739232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 188
Target Start/End: Complemental strand, 13618782 - 13618707
Alignment:
Q  113 atgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagaca 188  Q
    ||||||||||| ||||  || ||||| |||||||||| ||||||| |||||||| ||||| |||||||||||||||    
T  13618782 atgagattaattagaatagattgacagtgtaaaacaactttacaccatcaactagttaaactcattcaattagaca 13618707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22399231 - 22399278
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  22399231 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 22399278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 40131006 - 40130955
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgt 52  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  40131006 ttggggtaaattacccaccattcttccataggtaccctagttgtcaccttgt 40130955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40643935 - 40643982
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  40643935 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 40643982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44222964 - 44223011
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  44222964 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 44223011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 47809641 - 47809594
Alignment:
Q  3 ggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  47809641 ggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 47809594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7855161 - 7855112
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  7855161 ttgggataaattacccaccattcttccatgggtaccctagttgtcacctt 7855112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42291977 - 42292026
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  42291977 ttggggtaaattacccaccattcttccataggtaccctagttgtcacctt 42292026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43612094 - 43612045
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  43612094 ttggggtaaattacccatcattcttccatgggtaccctagttgtcacctt 43612045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 28048436 - 28048392
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||    
T  28048436 gggtaaattacccaccattcttccatgggtaccctagttgtcacc 28048392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49330172 - 49330228
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgtttcta 57  Q
    |||||||||||||| ||  |||||||||||||| |||||||||||||||| ||||||    
T  49330172 ttggggtaaattactcatcattcttccatgggtaccctagttgtcaccttatttcta 49330228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 52864629 - 52864673
Alignment:
Q  6 gtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  52864629 gtaaattacccaccattcttccatgggtaccctagttgtcacctt 52864673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 55380109 - 55380161
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgtt 53  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||| ||||    
T  55380109 ttggggtaaattacccaccatttttccatgggtaccctagttgtcaccatgtt 55380161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 24100421 - 24100464
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||| |||||||||||||| ||||||||||||||    
T  24100421 ggtaaattacccaccattcttccatgggtaccctagttgtcacc 24100464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37324676 - 37324723
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  37324676 ttgggataaattacccaccattcttccatgggtaccctagttgtcacc 37324723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30251548 - 30251498
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttg 51  Q
    ||||| |||||||||||| |||||||||||| | |||||||||||||||||    
T  30251548 ttgggctaaattacccaccattcttccatggataccctagttgtcaccttg 30251498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35594256 - 35594306
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttg 51  Q
    ||||| |||||||||||| |||||||||||||| |||||||||| ||||||    
T  35594256 ttgggataaattacccaccattcttccatgggtaccctagttgttaccttg 35594306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 48609861 - 48609903
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  48609861 gggtaaattacccaccattcttccatgggtaccctagttgtca 48609903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 40804554 - 40804509
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||    
T  40804554 gggtaaattacccaccatttttccatgggtaccctagttgtcacct 40804509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41216590 - 41216639
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||| ||||||||||||||||||||||| ||| | ||||||||||||||    
T  41216590 ttgggataaattacccactattcttccataggtactctagttgtcacctt 41216639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46126122 - 46126170
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  46126122 ttggggtaaattacccaccattcttccat-ggtaccctagttgtcacctt 46126170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 49130702 - 49130751
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||| ||||    
T  49130702 ttggggtaaattacccaccattcttctatgggtaccctagttgtctcctt 49130751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 2666139 - 2666183
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||    
T  2666139 ggtaaattacccactattctttcatgggtactctagttgtcacct 2666183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40419970 - 40420018
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||| ||| |||||| ||||||| |||||||||||||||    
T  40419970 ttggggtaaattactcaccattctttcatgggtaccctagttgtcacct 40420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5560072 - 5560025
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||| |||| ||||||||||| || ||||||||||||||    
T  5560072 ttggggtaaattatccaccattcttccatgagtaccctagttgtcacc 5560025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37313534 - 37313581
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| | |||| |||||||    
T  37313534 ttggggtaaattacccaccattcttccatgggtactctaggtgtcacc 37313581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 50731961 - 50731914
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||| ||||||| ||||| |||||||||||||| ||||||||||||||    
T  50731961 ttggagtaaatttcccaccattcttccatgggtaccctagttgtcacc 50731914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50780895 - 50780942
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||| ||||||| ||||| |||||||||||||| ||||||||||||||    
T  50780895 ttggagtaaatttcccaccattcttccatgggtaccctagttgtcacc 50780942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 51102425 - 51102378
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||| | ||| ||||||||||||||    
T  51102425 ttggggtaaattacccaccattcttccgttggtaccctagttgtcacc 51102378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 41293363 - 41293317
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||||| ||||||| |||||| ||||| ||||||||||    
T  41293363 gggtaaattacccaccattcttctatgggtaccctaattgtcacctt 41293317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43021850 - 43021896
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||||||| |||||| ||| ||| |||||||||||||    
T  43021850 ttggggtaaattacccaccattctttcataggtaccctagttgtcac 43021896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51170080 - 51170034
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||| ||||||||||||| |||||||||||||| || ||||||||||    
T  51170080 ttggagtaaattacccaccattcttccatgggtaccatagttgtcac 51170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 55453287 - 55453245
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcac 47  Q
    |||||||||||||| |||||||||| ||| |||||||||||||    
T  55453287 ggtaaattacccaccattcttccataggtaccctagttgtcac 55453245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7755354 - 7755305
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||| |||||  |||||||||||||| ||||| ||||||||||    
T  7755354 ttggggtaaataacccatcattcttccatgggtaccctacttgtcacctt 7755305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 18947045 - 18947086
Alignment:
Q  8 aaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||||||||| |||||||||||||| ||||| |||||||||    
T  18947045 aaattacccaccattcttccatgggtaccctacttgtcacct 18947086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20754440 - 20754391
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||| |||||||||||| ||| ||||||| || ||||||||||||||||    
T  20754440 ttgggataaattacccaccattattccatgagtaccctagttgtcacctt 20754391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 33550510 - 33550465
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| |||||||||||  | ||||||||||||||||    
T  33550510 ggtaaattacccaccattcttccatgaataccctagttgtcacctt 33550465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 43260882 - 43260841
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    |||||||||||||||||| |||||||| | ||||||||||||    
T  43260882 ggtaaattacccactatttttccatggataccctagttgtca 43260841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48546887 - 48546842
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    ||||||||||||| |||| |||||||||||| | ||||||||||||    
T  48546887 ttggggtaaattatccaccattcttccatggataccctagttgtca 48546842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 52638981 - 52639026
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| ||| ||| |||||| ||||||||||||||||    
T  52638981 ggtaaattacccaccattattctatgggtaccctagttgtcacctt 52639026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 53115571 - 53115620
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||||||||| |||| ||| |||||| ||| ||||||||||||||||    
T  53115571 ttggggtaaattatccaccatttttccataggtaccctagttgtcacctt 53115620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 53832531 - 53832486
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    ||||||||||||| |||| ||||||||||| || ||||||||||||    
T  53832531 ttggggtaaattatccaccattcttccatgtgttccctagttgtca 53832486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 53943634 - 53943586
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||| ||| | ||||||||||||||    
T  53943634 ttggggtaaattacccaccattcttccat-ggtactctagttgtcacctt 53943586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 55000225 - 55000176
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||  |||||| |||||||  |||||||||||||||    
T  55000225 ttggggtaaattacccatcattctttcatgggtagcctagttgtcacctt 55000176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27067025 - 27066977
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||| |||||||||||  |||||||||||| | |||||||||||||||    
T  27067025 ttgggataaattacccatcattcttccatggataccctagttgtcacct 27066977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29625874 - 29625826
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| ||||||| |||||| ||||| || ||||||    
T  29625874 ttggggtaaattacccaccattcttctatgggtaccctaattatcacct 29625826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35748358 - 35748310
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    ||||| |||||||||||  |||||||||||| | |||||||||||||||    
T  35748358 ttgggataaattacccatcattcttccatggataccctagttgtcacct 35748310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 44806824 - 44806868
Alignment:
Q  6 gtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||| |||| |||||| ||||||| ||||||||||||||||    
T  44806824 gtaaattatccacaattctttcatgggtaccctagttgtcacctt 44806868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 4171173 - 4171258
Alignment:
Q  114 tgagattaatcagaacggactgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaa 199  Q
    |||||||||| | || ||||||||||||||||  || |||||||||||| | |||||||||| || |||||||||||||| |||||    
T  4171173 tgagattaattataatggactgacaatgtaaacaaactttacactatcatccaattaaaatcgtttaattagacacatcagcttaa 4171258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5882641 - 5882690
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  5882641 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 5882690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26377251 - 26377202
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  26377251 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 26377202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34527909 - 34527860
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  34527909 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacctt 34527860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 8615378 - 8615422
Alignment:
Q  4 gggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  8615378 gggtaaattacccactattcttccatgggtaccctagttgtcacc 8615422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11989021 - 11988973
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  11989021 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacct 11988973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24168226 - 24168274
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  24168226 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacct 24168274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22551108 - 22551061
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  22551108 ttggggtaaattacccaccattcttccatgggtaccctagttgtcacc 22551061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 4226789 - 4226854
Alignment:
Q  134 tgacaatgtaaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaa 199  Q
    |||||||||||| ||| |||||||||||| | |||||||||| || |||||||||||||| |||||    
T  4226789 tgacaatgtaaaccaactttacactatcatccaattaaaatcgtttaattagacacatcagcttaa 4226854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22341835 - 22341786
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| || |||||||||||||    
T  22341835 ttggggtaaattacccaccattcttccatgggtaccttagttgtcacctt 22341786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 959951 - 959904
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  959951 ttggggtaaattacccaccattctttcatgggtaccctagttgtcacc 959904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7167706 - 7167753
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  7167706 ttggggtaaattacccaccatttttccatgggtaccctagttgtcacc 7167753  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14891426 - 14891383
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgt 44  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  14891426 ttggggtaaattacccaccattcttccatgggtaccctagttgt 14891383  T

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Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 28947226 - 28947269
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||| |||||||||||||| ||||||||||||||    
T  28947226 ggtaaattacccaccattcttccatgggtaccctagttgtcacc 28947269  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7393633 - 7393584
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||||||| |||||||||||||| || || ||||||||||    
T  7393633 ttggggtaaattacccaccattcttccatgggtaccataattgtcacctt 7393584  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19415580 - 19415531
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||| ||||||||||||  |||||||||||||| ||||||||||||||||    
T  19415580 ttggagtaaattacccatcattcttccatgggtaccctagttgtcacctt 19415531  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1970846 - 1970894
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||||||    
T  1970846 ttggggtaaattacccaccattcttccatgggtactttagttgtcacct 1970894  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18101542 - 18101495
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||  ||||||||||||||  |||||||||||||    
T  18101542 ttggggtaaattacccatcattcttccatgggtatcctagttgtcacc 18101495  T

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Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33452619 - 33452572
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||| ||| ||||||||||||||  |||||||||||||    
T  33452619 ttggggtaaattactcaccattcttccatgggtatcctagttgtcacc 33452572  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 34262360 - 34262403
Alignment:
Q  7 taaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||| ||| |||||||||| ||||||||||||||||    
T  34262360 taaattacccaccatttttccatgggtaccctagttgtcacctt 34262403  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2593899 - 2593849
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttg 51  Q
    ||||| ||||||| |||| |||||||||| ||| |||||||||||||||||    
T  2593899 ttgggataaattatccaccattcttccataggtaccctagttgtcaccttg 2593849  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2892323 - 2892368
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtca 46  Q
    ||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  2892323 ttggggtaaattatccaccattcttctatgggtaccctagttgtca 2892368  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 5294844 - 5294799
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||| ||| ||||||||||| || ||||||||||||||||    
T  5294844 ggtaaattactcaccattcttccatgagtaccctagttgtcacctt 5294799  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 5299396 - 5299351
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||| ||| ||||||||||| || ||||||||||||||||    
T  5299396 ggtaaattactcaccattcttccatgagtaccctagttgtcacctt 5299351  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10507955 - 10507907
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||| ||||||| ||||||| |||| | |||||||||||||||    
T  10507955 ttggggtaaactacccaccattcttcgatggctaccctagttgtcacct 10507907  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15965557 - 15965605
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||  |||||| |||||||  ||||||||||||||    
T  15965557 ttggggtaaattacccatcattctttcatgggtagcctagttgtcacct 15965605  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 16914355 - 16914291
Alignment:
Q  142 taaaacaattttacactatcaactaattaaaatcattcaattagacacatcaacttaagtgttaa 206  Q
    |||||||| |||||||||||||| ||| ||||| || |||||| |||| ||  ||||||||||||    
T  16914355 taaaacaagtttacactatcaaccaataaaaattatccaattaaacacctcctcttaagtgttaa 16914291  T

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Target: scaffold0092 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39603 - 39552
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttgt 52  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  39603 ttggggtaaattacccatcattcttccatgggtaccctagttgtcaccttgt 39552  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 278143 - 278193
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcaccttg 51  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  278143 ttgggataaattacccaccattcttccatgggtaccctagttgtcaccttg 278193  T

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Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 176789 - 176837
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacct 49  Q
    |||||||||||||||||| ||||||| ||||||  ||||||||||||||    
T  176789 ttggggtaaattacccaccattcttctatgggtatcctagttgtcacct 176837  T

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Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 13805 - 13760
Alignment:
Q  5 ggtaaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  13805 ggtaaattacccaccattcttccatgggtaccctagttgtcacctt 13760  T

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Target: scaffold0949 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0949
Description:

Target: scaffold0949; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2004 - 2051
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  2004 ttggagtaaattacccaccattcttccatgggtaccctagttgtcacc 2051  T

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Target: scaffold0429 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4643 - 4596
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  4643 ttgggataaattacccaccattcttccatgggtaccctagttgtcacc 4596  T

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Target: scaffold0372 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11180 - 11133
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  11180 ttggggtaaattatccaccattcttccatgggtaccctagttgtcacc 11133  T

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Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20524 - 20477
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  20524 ttggggtaaattacccaccatttttccatgggtaccctagttgtcacc 20477  T

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Target: scaffold0198 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 18895 - 18852
Alignment:
Q  7 taaattacccactattcttccatgggtcccctagttgtcacctt 50  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||    
T  18895 taaattatccacaattcttccatgggtaccctagttgtcacctt 18852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14868 - 14915
Alignment:
Q  1 ttggggtaaattacccactattcttccatgggtcccctagttgtcacc 48  Q
    ||||||||||||||| || ||| |||||||||| ||||||||||||||    
T  14868 ttggggtaaattacctaccatttttccatgggtaccctagttgtcacc 14915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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