View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11909_low_28 (Length: 205)

Name: NF11909_low_28
Description: NF11909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11909_low_28
NF11909_low_28
[»] chr2 (32 HSPs)
chr2 (1-205)||(9296247-9296451)
chr2 (1-205)||(14291535-14291740)
chr2 (1-205)||(11098772-11098977)
chr2 (1-205)||(3491797-3491999)
chr2 (36-205)||(25398542-25398710)
chr2 (36-205)||(25403680-25403848)
chr2 (36-205)||(25407669-25407837)
chr2 (1-205)||(40738889-40739081)
chr2 (1-205)||(28259027-28259227)
chr2 (1-202)||(36757612-36757809)
chr2 (1-199)||(23078321-23078514)
chr2 (1-205)||(8389999-8390200)
chr2 (73-205)||(42039588-42039719)
chr2 (1-205)||(8040107-8040311)
chr2 (71-205)||(39811894-39812026)
chr2 (72-205)||(32246835-32246966)
chr2 (1-199)||(10707102-10707296)
chr2 (1-205)||(13569375-13569576)
chr2 (109-205)||(44312567-44312662)
chr2 (107-205)||(10445397-10445494)
chr2 (1-201)||(34388909-34389098)
chr2 (1-205)||(21629990-21630192)
chr2 (107-205)||(34682287-34682384)
chr2 (107-205)||(14698961-14699057)
chr2 (154-197)||(20522275-20522319)
chr2 (107-205)||(31056091-31056188)
chr2 (107-197)||(39482986-39483075)
chr2 (124-197)||(17865258-17865330)
chr2 (164-205)||(27149303-27149344)
chr2 (154-201)||(2869691-2869739)
chr2 (107-205)||(33118183-33118280)
chr2 (154-197)||(33528619-33528663)
[»] chr8 (25 HSPs)
chr8 (1-205)||(4759920-4760125)
chr8 (1-205)||(36979424-36979629)
chr8 (1-205)||(30655693-30655898)
chr8 (1-205)||(33037653-33037856)
chr8 (1-205)||(1261802-1262004)
chr8 (1-205)||(10688985-10689193)
chr8 (1-205)||(18870406-18870612)
chr8 (2-205)||(18853013-18853218)
chr8 (1-205)||(31071077-31071279)
chr8 (1-205)||(6311344-6311550)
chr8 (1-205)||(26287948-26288139)
chr8 (1-205)||(26301205-26301396)
chr8 (1-205)||(26313199-26313390)
chr8 (1-205)||(7412388-7412587)
chr8 (1-205)||(4456075-4456275)
chr8 (1-205)||(19175604-19175804)
chr8 (71-205)||(7289831-7289964)
chr8 (71-205)||(25328184-25328316)
chr8 (107-205)||(19752347-19752444)
chr8 (1-205)||(23799426-23799627)
chr8 (1-205)||(26403079-26403280)
chr8 (107-205)||(6127268-6127365)
chr8 (154-205)||(6813730-6813782)
chr8 (156-205)||(39784813-39784860)
chr8 (154-205)||(9054835-9054887)
[»] chr6 (21 HSPs)
chr6 (1-205)||(5674615-5674820)
chr6 (1-205)||(22709065-22709257)
chr6 (1-205)||(21356083-21356284)
chr6 (1-205)||(5757328-5757528)
chr6 (71-205)||(11857021-11857154)
chr6 (71-205)||(22010602-22010735)
chr6 (71-205)||(14737482-14737614)
chr6 (71-205)||(14742342-14742474)
chr6 (72-205)||(28155477-28155607)
chr6 (71-205)||(28184552-28184684)
chr6 (107-205)||(31086426-31086523)
chr6 (1-197)||(18232900-18233093)
chr6 (119-205)||(5572206-5572291)
chr6 (1-205)||(31979560-31979759)
chr6 (107-205)||(10077118-10077215)
chr6 (154-205)||(22963746-22963798)
chr6 (154-205)||(23824595-23824647)
chr6 (167-205)||(4630001-4630039)
chr6 (156-205)||(6438548-6438595)
chr6 (72-205)||(16838791-16838923)
chr6 (154-205)||(21801342-21801394)
[»] chr7 (33 HSPs)
chr7 (1-205)||(1533289-1533494)
chr7 (1-205)||(2058012-2058220)
chr7 (1-205)||(20357392-20357597)
chr7 (1-205)||(21639855-21640057)
chr7 (1-205)||(21646053-21646255)
chr7 (4-205)||(18413686-18413884)
chr7 (1-205)||(18408810-18409011)
chr7 (1-205)||(2479383-2479583)
chr7 (1-205)||(21983331-21983533)
chr7 (70-201)||(12406382-12406512)
chr7 (35-205)||(44848567-44848734)
chr7 (1-205)||(29159850-29160052)
chr7 (71-202)||(12396961-12397091)
chr7 (107-205)||(2580437-2580533)
chr7 (107-205)||(9189961-9190058)
chr7 (71-205)||(24024232-24024364)
chr7 (71-205)||(31109489-31109621)
chr7 (1-152)||(47263764-47263913)
chr7 (1-205)||(21988953-21989155)
chr7 (107-205)||(55994-56091)
chr7 (107-205)||(2647649-2647746)
chr7 (156-205)||(19992360-19992408)
chr7 (107-205)||(46516263-46516360)
chr7 (107-205)||(49091708-49091805)
chr7 (109-205)||(20284136-20284230)
chr7 (161-205)||(4866777-4866820)
chr7 (107-205)||(23402967-23403063)
chr7 (107-169)||(9185128-9185189)
chr7 (155-205)||(16880120-16880169)
chr7 (155-205)||(16884976-16885025)
chr7 (154-205)||(5817268-5817320)
chr7 (154-205)||(28617223-28617275)
chr7 (154-205)||(33332448-33332500)
[»] chr3 (36 HSPs)
chr3 (1-205)||(2671431-2671636)
chr3 (1-205)||(40372641-40372845)
chr3 (1-205)||(7167291-7167496)
chr3 (1-205)||(8738908-8739113)
chr3 (1-205)||(9091146-9091351)
chr3 (1-205)||(8477409-8477616)
chr3 (1-205)||(26928438-26928641)
chr3 (1-205)||(32143368-32143570)
chr3 (1-205)||(28501542-28501747)
chr3 (2-205)||(28503710-28503914)
chr3 (1-205)||(27453005-27453207)
chr3 (1-204)||(1305996-1306197)
chr3 (1-205)||(27974791-27974992)
chr3 (1-205)||(16264397-16264596)
chr3 (1-205)||(6794554-6794753)
chr3 (1-205)||(27986295-27986486)
chr3 (1-205)||(33386514-33386706)
chr3 (1-205)||(8370328-8370526)
chr3 (71-205)||(22173100-22173233)
chr3 (1-203)||(35925529-35925725)
chr3 (1-204)||(36029141-36029340)
chr3 (1-205)||(21711270-21711469)
chr3 (1-201)||(40592621-40592818)
chr3 (1-205)||(3715841-3716042)
chr3 (107-205)||(18552826-18552923)
chr3 (75-205)||(18656482-18656609)
chr3 (107-205)||(1736248-1736345)
chr3 (1-95)||(39032393-39032485)
chr3 (107-205)||(40844698-40844795)
chr3 (107-205)||(48438261-48438358)
chr3 (154-205)||(4386915-4386967)
chr3 (107-205)||(25795828-25795925)
chr3 (107-205)||(30709733-30709830)
chr3 (107-205)||(3328300-3328396)
chr3 (154-202)||(3323679-3323727)
chr3 (154-205)||(26299035-26299087)
[»] chr4 (31 HSPs)
chr4 (1-205)||(24741987-24742192)
chr4 (1-205)||(29760688-29760892)
chr4 (1-205)||(31985483-31985684)
chr4 (2-205)||(28468387-28468579)
chr4 (1-205)||(5396521-5396721)
chr4 (71-205)||(51520504-51520637)
chr4 (1-205)||(16623143-16623343)
chr4 (71-205)||(9224312-9224445)
chr4 (71-205)||(9229099-9229232)
chr4 (72-205)||(45357203-45357334)
chr4 (30-205)||(5147724-5147897)
chr4 (1-201)||(3777600-3777796)
chr4 (72-205)||(45347723-45347855)
chr4 (71-205)||(3814071-3814202)
chr4 (107-205)||(36315183-36315279)
chr4 (107-205)||(36329392-36329488)
chr4 (3-205)||(5143306-5143505)
chr4 (75-205)||(5732712-5732839)
chr4 (1-169)||(8689346-8689509)
chr4 (1-97)||(16628722-16628815)
chr4 (107-205)||(10047426-10047523)
chr4 (1-205)||(24333856-24334058)
chr4 (155-205)||(56146700-56146749)
chr4 (107-205)||(3796472-3796569)
chr4 (124-202)||(16630650-16630727)
chr4 (110-205)||(38152395-38152489)
chr4 (154-205)||(5112284-5112336)
chr4 (154-205)||(39246041-39246093)
chr4 (167-205)||(6743427-6743465)
chr4 (168-205)||(5269204-5269241)
chr4 (156-205)||(18855774-18855821)
[»] chr1 (26 HSPs)
chr1 (1-205)||(24202617-24202819)
chr1 (1-205)||(19358691-19358893)
chr1 (1-205)||(19361280-19361482)
chr1 (1-205)||(19379920-19380122)
chr1 (1-205)||(24787209-24787414)
chr1 (2-143)||(19366157-19366297)
chr1 (1-205)||(13604472-13604673)
chr1 (1-205)||(3281755-3281954)
chr1 (1-205)||(26644748-26644947)
chr1 (1-205)||(21536420-21536619)
chr1 (71-205)||(41390628-41390760)
chr1 (71-205)||(41398283-41398415)
chr1 (107-205)||(32889486-32889583)
chr1 (1-205)||(37069817-37070014)
chr1 (1-205)||(47703785-47703986)
chr1 (72-205)||(25444996-25445127)
chr1 (119-205)||(9476308-9476393)
chr1 (107-205)||(16124469-16124566)
chr1 (154-205)||(27104370-27104422)
chr1 (107-205)||(47098778-47098874)
chr1 (154-205)||(19072975-19073027)
chr1 (154-205)||(19120865-19120917)
chr1 (107-205)||(29651858-29651955)
chr1 (156-205)||(39445547-39445594)
chr1 (156-205)||(44023864-44023911)
chr1 (154-198)||(48382479-48382524)
[»] chr5 (30 HSPs)
chr5 (1-205)||(24135895-24136098)
chr5 (1-205)||(38219445-38219647)
chr5 (1-205)||(35387709-35387911)
chr5 (1-205)||(31180261-31180465)
chr5 (55-205)||(38192220-38192369)
chr5 (1-205)||(30631453-30631658)
chr5 (5-205)||(15464579-15464777)
chr5 (1-205)||(36932198-36932400)
chr5 (1-205)||(9353182-9353382)
chr5 (1-205)||(14520277-14520477)
chr5 (71-205)||(1457067-1457200)
chr5 (71-205)||(27445017-27445150)
chr5 (71-205)||(27449861-27449994)
chr5 (71-205)||(43592326-43592459)
chr5 (71-205)||(43598771-43598904)
chr5 (71-205)||(43604263-43604396)
chr5 (71-205)||(43609755-43609888)
chr5 (71-205)||(15044733-15044865)
chr5 (1-205)||(10281798-10281999)
chr5 (1-205)||(11916822-11917022)
chr5 (73-205)||(12084096-12084225)
chr5 (74-205)||(3880346-3880476)
chr5 (76-205)||(28807485-28807610)
chr5 (1-205)||(17003809-17004010)
chr5 (107-199)||(31300549-31300640)
chr5 (157-205)||(37556613-37556660)
chr5 (157-205)||(37561435-37561482)
chr5 (109-205)||(19588793-19588888)
chr5 (154-205)||(28832306-28832357)
chr5 (107-205)||(42127364-42127460)
[»] scaffold0188 (2 HSPs)
scaffold0188 (1-205)||(17800-18002)
scaffold0188 (1-205)||(23893-24095)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-205)||(8267-8469)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-205)||(133129-133330)
scaffold0006 (167-204)||(2540-2577)
[»] scaffold0087 (2 HSPs)
scaffold0087 (1-205)||(43811-44011)
scaffold0087 (1-205)||(36682-36882)
[»] scaffold0135 (1 HSPs)
scaffold0135 (71-205)||(34967-35100)
[»] scaffold0355 (1 HSPs)
scaffold0355 (71-205)||(9549-9680)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-205)||(85730-85930)
[»] scaffold0148 (1 HSPs)
scaffold0148 (119-205)||(10776-10861)
[»] scaffold0098 (2 HSPs)
scaffold0098 (1-73)||(45374-45445)
scaffold0098 (168-205)||(45300-45337)
[»] scaffold0176 (1 HSPs)
scaffold0176 (110-197)||(17318-17404)
[»] scaffold0464 (1 HSPs)
scaffold0464 (156-205)||(410-457)


Alignment Details
Target: chr2 (Bit Score: 181; Significance: 5e-98; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 5e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 9296247 - 9296451
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9296247 cattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 9296346  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    |||| |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9296347 acacatatgggtagaatctagggcttgttcttgtataagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 9296446  T
Q  201 tgctc 205  Q
    |||||    
T  9296447 tgctc 9296451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 14291740 - 14291535
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14291740 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 14291641  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14291640 aacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 14291541  T
Q  200 ctgctc 205  Q
    ||||||    
T  14291540 ctgctc 14291535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 11098772 - 11098977
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    ||||||||||||||||||||||||||||  ||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11098772 cattgtaatcaccttgggtagtgaggagtacattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 11098871  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  | ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11098872 aacaccaaagggtagaatctagggtttgttcttgtgtaagcttgcaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 11098971  T
Q  200 ctgctc 205  Q
    ||||||    
T  11098972 ctgctc 11098977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 3491999 - 3491797
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| ||||||||||||||||   | |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3491999 cattgtaaacaccttgggtagtgagattc-caccattggaaggatcttaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggggaa 3491901  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  3491900 acacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 3491802  T
Q  201 tgctc 205  Q
    |||||    
T  3491801 tgctc 3491797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 25398710 - 25398542
Alignment:
Q  36 ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtg 135  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||| |||||| |||||    
T  25398710 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtg 25398611  T
Q  136 taagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25398610 taagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagctgctc 25398542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 25403848 - 25403680
Alignment:
Q  36 ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtg 135  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||| |||||| |||||    
T  25403848 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtg 25403749  T
Q  136 taagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25403748 taagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagctgctc 25403680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 25407837 - 25407669
Alignment:
Q  36 ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtg 135  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||| |||||| |||||    
T  25407837 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtg 25407738  T
Q  136 taagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25407737 taagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagctgctc 25407669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 40739081 - 40738889
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| ||||||||||| |||| |  ||||||||||||| ||| ||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  40739081 cattgtaaacaccttgggtaatgag-atttcaccattggaaggatcaaaagcttactattgtgtcttctcttttagggttcatattgtgagagtggggaa 40738983  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||| | |||||| ||||||||||||| |||||||| ||||          ||||||||||||||||||| |||||||||||||    
T  40738982 acacaaatgggtagaaactaagacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttcatcatagtggattggagagc 40738894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 28259027 - 28259227
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| || ||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| |||| |||| |||| ||||||||| |    
T  28259027 cattgtaaacatcttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt-aggggtcattattgagagagtggg-a 28259123  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||  |||||| ||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||    
T  28259124 aacacaaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacactttcatcatagtggattggagag 28259221  T
Q  200 ctgctc 205  Q
    ||||||    
T  28259222 ctgctc 28259227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 36757612 - 36757809
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| ||||||||| |||| ||||||||| |    
T  36757612 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt-agggttcatcattgagagagtgggta 36757709  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    | |||  ||||||||||  ||||  ||||| ||||||||||||||||||| ||  ||||| |||| ||||| ||||||||||||||| ||||||||||||    
T  36757710 a-cacaaatgggtagaaattaggttttgttcttgtgtaagcttgaaagctttt--ttcttataactctttgaaacactttcatcatactggattggagag 36757806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23078321 - 23078514
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtg-ggga 99  Q
    |||||||| |||||||||||||||| |  ||| ||||||||| ||| |||||||||| | ||||||||||||  |||||||||  | |||||||| |||     
T  23078321 cattgtaaacaccttgggtagtgag-atttcatcattggaaggatcaaaagcttccttttgtgtcttctctt--agggttcatcat-tgagagtgtgggt 23078416  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  || | |||||| ||||||||||||| ||||||||  |||||||||| |||| |||||||||||||||| ||||||||||||    
T  23078417 aacacaaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttctaacactttcatcatagtggattggagag 23078514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 8389999 - 8390200
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| |||||||| ||||||| |  | ||||||||||||||| ||| ||||||||| |||| |||||||  ||| ||||||||||||||||||| |    
T  8389999 cattgtaaacaccttggatagtgag-attttaccattggaagaatcaaaaagcttcctcttgtgttttctctt--aggattcatattgtgagagtgggtg 8390095  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgt-aacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  |||| |||||| ||||| ||||||| |||||| |  |||||||||| |||| | ||||||||||||||| ||||||||||    
T  8390096 acacaaa-atgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaat--ttcttgtaactcttttttaacactttcatcatagtggattggag 8390192  T
Q  198 agctgctc 205  Q
    ||||||||    
T  8390193 agctgctc 8390200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 42039588 - 42039719
Alignment:
Q  73 ttagggttcatattgtgagagtggg-gaaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgt 171  Q
    ||||| ||||||||||||||||||| || |||   ||||||||||  |||| |||||||||||||||||||| |||||| | ||||||||||| ||| ||    
T  42039588 ttaggattcatattgtgagagtgggtgacacaaa-atgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaat-tttcttgtaactcttcgt 42039685  T
Q  172 aacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||||||| |||||| |||||||||||    
T  42039686 aacactttcatcatagtggattagagagctgctc 42039719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 8040311 - 8040107
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| ||| ||||||| |  ||| || ||| ||||| ||||||||||||||||||| |    
T  8040311 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaaagcttccttttatgtttt-tctcttaggattcatattgtgagagtgggtg 8040214  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccct---ttgtaacactttcatcatattggattgg 195  Q
    | |||   ||||||||||  |||| |||||| ||||||||||||| |||||| |  |||||||||| ||   ||||||||||||||||||| ||||||||    
T  8040213 acacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactctcttttgtaacactttcatcatagtggattgg 8040117  T
Q  196 agagctgctc 205  Q
    ||||||||||    
T  8040116 agagctgctc 8040107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 39811894 - 39812026
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  |  |||||||||| |||    
T  39811894 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggcta--gagtcttgtaacctttt 39811991  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39811992 gtaacactttc-tcatattggattggagagctgctc 39812026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 32246966 - 32246835
Alignment:
Q  72 tttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctttg 170  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||| ||||||||| |||||  ||||| ||||||||||||||  |  |||||||||| ||||    
T  32246966 tttagggttcatagtgtgagagtgggaaaataccaaagggtataatctagggtttgttcatgtgtaaagcttgaaagcta--gagtcttgtaaccttttg 32246869  T
Q  171 taacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| ||||||||||||||||||||||||    
T  32246868 taacactttc-tcatattggattggagagctgctc 32246835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 10707102 - 10707296
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||| ||||||||||||| || |  |||||||| |||| ||| ||| ||||||| | |||| |||||||  ||| |||||||||||||||||||      
T  10707102 cattgtaaacaccttgggtagttag-atttcaccattagaaggatcaaaaagcttccttttgtgttttctctt--aggattcatattgtgagagtgggtg 10707198  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggaga 198  Q
    | |||  ||||||||||  |||| |||||| ||||||||||||| |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||||    
T  10707199 a-cacagatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggaga 10707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 13569576 - 13569375
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||| ||| |||||||| ||||||| |  ||||||||||||| ||| ||| ||||||| | |||| |||||||  ||| ||||||||||||||||||| |    
T  13569576 cattataaacaccttggatagtgag-atttcaccattggaaggatcaaaaagcttccttttgtgttttctctt--aggattcatattgtgagagtgggtg 13569480  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    | | ||  | ||||||||  |||| |||||| |||||||| |||  |||||| |  |||||||||| |||| ||||||||||||||||| ||||||||||    
T  13569479 acaaacaaa-gggtagaaattaggtcttgttcttgtgtaaacttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggag 13569383  T
Q  198 agctgctc 205  Q
    ||||||||    
T  13569382 agctgctc 13569375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 44312567 - 44312662
Alignment:
Q  109 gggtagaatctagggcttgtttttgtgtaa-gcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||||||| |||||  ||||||| ||||||| ||||  ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  44312567 gggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgtaacactttc-tcatattggattggagagctgctc 44312662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 10445397 - 10445494
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||| ||| |||||| |  |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||    
T  10445397 atgggtagaaattaggtcttgttcttgtgtaagattgtaagctaat--ttcttgtaactcttttgtaacactttcataatagtggattggagagctgctc 10445494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 34389098 - 34388909
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| ||| ||||||| | |||| |||||||  ||| ||||||||||||||||||| |    
T  34389098 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaaagcttccttttgtgttttctctt--aggattcatattgtgagagtgggtg 34389002  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  |||| |||||| |||||||||||  ||        ||||||||||| | |||||||||||||||||||| ||||||||||    
T  34389001 acaca-aaatgggtagaaattaggtcttgttcttgtgtaagct--aa--------tttcttgtaactcttttgtaacactttcatcatagtggattggag 34388913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21630192 - 21629990
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcat-attgtgagagtggg- 97  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| ||| ||||||| | |||| |||||||  ||| ||||| |||| ||| |||||     
T  21630192 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaaagcttccttttgtgttttctctt--aggattcattattgagagtgtgggt 21630096  T
Q  98 gaaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattgga 196  Q
    || |||   ||||||||||  || | |||||| ||||||||||||  || |||   ||||||||||| | |||||||||||||||||||| |||||||||    
T  21630095 gacacaaa-atgggtagaaattaagtcttgttcttgtgtaagcttataaacta--atttcttgtaactcttttgtaacactttcatcatagtggattgga 21629999  T
Q  197 gagctgctc 205  Q
    |||||||||    
T  21629998 gagctgctc 21629990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 34682287 - 34682384
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  || | |||||| |||||||||| || |||||| |  |||||||||| |||| ||||||||||||| ||| ||||||||||||||||||    
T  34682287 atgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaat--ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctc 34682384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 14698961 - 14699057
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||| ||||||||||| |||||||||| |||||||    
T  14698961 atgggtagaaattaggtcttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctc 14699057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 20522319 - 20522275
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||    
T  20522319 tttcttgtaacccttttgtaacactttcatcatagtggattggag 20522275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 31056188 - 31056091
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| || |||||||||  |||||| |  || ||||||| |||| |||||||||||||| || ||||||||||||||||||    
T  31056188 atgggtagaaattaggtcttgttcttttgtaagcttataagctaat--ttattgtaactcttttgtaacactttcatcttagtggattggagagctgctc 31056091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 39483075 - 39482986
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggag 197  Q
    ||||||||||  |||| |||||| ||||||||||||  ||||||   ||||||||||| | ||||||||| |||||||||| ||||||||||    
T  39483075 atgggtagaaattaggtcttgttcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacattttcatcatagtggattggag 39482986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 197
Target Start/End: Complemental strand, 17865330 - 17865258
Alignment:
Q  124 cttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| ||||||||||    
T  17865330 cttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggag 17865258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 27149303 - 27149344
Alignment:
Q  164 ccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||    
T  27149303 ccctttgtatcactttcattatagtggattggagagctgctc 27149344  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 2869691 - 2869739
Alignment:
Q  154 tttcttgtaac-cctttgtaacactttcatcatattggattggagagct 201  Q
    ||||||||||| |||||||| |||||||||| || ||||||||||||||    
T  2869691 tttcttgtaactcctttgtatcactttcatcttagtggattggagagct 2869739  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 33118280 - 33118183
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  || | |||||| ||||||||||||  |||||| |  ||||||||||  ||| ||||| ||||||||||| |||||||||| |||||||    
T  33118280 atgggtagaaattaagtcttgttcttgtgtaagcttataagctaat--ttcttgtaactattttgtaactctttcatcatagtggattggagggctgctc 33118183  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 33528619 - 33528663
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||    
T  33528619 tttcttgtaactcttttgtaacactttcatcatagtggattggag 33528663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 4759920 - 4760125
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4759920 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 4760019  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4760020 aacacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 4760119  T
Q  200 ctgctc 205  Q
    ||||||    
T  4760120 ctgctc 4760125  T

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Target: chr8; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 36979629 - 36979424
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979629 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 36979530  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  | ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979529 aacaccaaagggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 36979430  T
Q  200 ctgctc 205  Q
    ||||||    
T  36979429 ctgctc 36979424  T

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Target: chr8; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 30655898 - 30655693
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30655898 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 30655799  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  | ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30655798 aacaccaaagggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattagattggagag 30655699  T
Q  200 ctgctc 205  Q
    ||||||    
T  30655698 ctgctc 30655693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 33037653 - 33037856
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33037653 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttt-agggttcatattgtgagagtgggga 33037751  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33037752 aacacatatgggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttc-tcatattggattggagag 33037850  T
Q  200 ctgctc 205  Q
    ||||||    
T  33037851 ctgctc 33037856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 1261802 - 1262004
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    ||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1261802 cattgtaatcaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 1261900  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||  ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  1261901 acacaaatgggtagaatctaggtcttgtacttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 1261999  T
Q  201 tgctc 205  Q
    |||||    
T  1262000 tgctc 1262004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 10688985 - 10689193
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccatt---ggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg 97  Q
    |||||||||||||||||||||||||||| |||  | |   || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10688985 cattgtaatcaccttgggtagtgaggagttcattagttgggggaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg 10689084  T
Q  98 gaaaca-cgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattgga 196  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10689085 gaaacaacatatgggtagaatctagggcttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctctgtaacactttcatcatattggattgga 10689184  T
Q  197 gagctgctc 205  Q
    |||||||||    
T  10689185 gagctgctc 10689193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 18870406 - 18870612
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18870406 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 18870505  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccc-tttgtaacactttcatcatattggattggaga 198  Q
    || ||  | ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  18870506 aataccaaagggtagaatctagggtttgttcttgtgtaagcttgaatgctattgtttcttgtaacccttttgtaacactttcattatattggattggaga 18870605  T
Q  199 gctgctc 205  Q
    |||||||    
T  18870606 gctgctc 18870612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 18853013 - 18853218
Alignment:
Q  2 attgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    ||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18853013 attgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 18853112  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccc-tttgtaacactttcatcatattggattggagag 199  Q
    | ||  | ||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  18853113 ataccaaagggtaaaatctagggtttgttcttgtgtaagcttgaatgctattgtttcttgtaacccttttgtaacactttcattatattggattggagag 18853212  T
Q  200 ctgctc 205  Q
    ||||||    
T  18853213 ctgctc 18853218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 31071077 - 31071279
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31071077 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcttaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggggaa 31071175  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31071176 acacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 31071274  T
Q  201 tgctc 205  Q
    |||||    
T  31071275 tgctc 31071279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 6311550 - 6311344
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctctttt--agggttcatattgtgagagtggg 97  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||| |||||||||||||||| ||||||||||  ||||||||| |||||||||||||    
T  6311550 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatcaaaagcttcctctagtgacttctcttttttagggttcatcttgtgagagtggg 6311451  T
Q  98 gaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattgga 196  Q
    |||||||  | ||||||||||||||| ||| | |||||| ||||||||| ||||  ||||||||||||| |||||||||||||| |||||||||||||||    
T  6311450 gaaacaccaaagggtagaatctagggtttg-tcttgtgtaaagcttgaaggctagagtttcttgtaaccttttgtaacactttc-tcatattggattgga 6311353  T
Q  197 gagctgctc 205  Q
    |||||||||    
T  6311352 gagctgctc 6311344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 26288139 - 26287948
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  26288139 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtgggg-a 26288042  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||||| |||||| ||||||||||||| |||||||| ||||          ||||||||||||||||||| |||||||||||||    
T  26288041 acacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttcatcatagtggattggagagc 26287953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 26301396 - 26301205
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  26301396 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtgggg-a 26301299  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||||| |||||| ||||||||||||| |||||||| ||||          ||||||||||||||||||| |||||||||||||    
T  26301298 acacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttcatcatagtggattggagagc 26301210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 26313390 - 26313199
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  26313390 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtgggg-a 26313293  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||||| |||||| ||||||||||||| |||||||| ||||          ||||||||||||||||||| |||||||||||||    
T  26313292 acacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttcatcatagtggattggagagc 26313204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 7412587 - 7412388
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||| ||| ||| |||||||||| |  |||||||||||  ||||||||| |||| ||||||||| |    
T  7412587 cattgtaaacaccttgggtagtgag-atttcaccattgaaaggatcaaaagcttccttttatgtcttctctt--agggttcattattgagagagtggg-a 7412492  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||||| ||||||||||||| ||| ||||  |||||||||| ||||||||||||||||||||| ||||||||||||    
T  7412491 aacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttatt--ttcttgtaactctttgtaacactttcatcatagtggattggagag 7412394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 4456275 - 4456075
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  |||||||| |||| ||| |||||||||| | ||||||||||||| ||||||||| |||| ||||||||| |    
T  4456275 cattgtaaacaccttgggtagtgag-atttcaccattagaaggatcaaaagcttccttttgtgtcttctcttt-agggttcatcattgagagagtgggta 4456178  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    | |||  ||||||||||  || | |||||| |||||||||||||  |||||||  |||||||||| ||||||||||||||||||||| ||||||||||||    
T  4456177 a-cacaaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctatt--ttcttgtaactctttgtaacactttcatcatagtggattggagag 4456081  T
Q  200 ctgctc 205  Q
    ||||||    
T  4456080 ctgctc 4456075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19175604 - 19175804
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  |||| |||||||| ||| |||| ||||| | ||||||||||||  ||||||||| |||| ||||||||| |    
T  19175604 cattgtaaacaccttgggtagtgag-atttcactattggaaggatcaaaagtttccttttgtgtcttctctt--agggttcatcattgagagagtggg-a 19175699  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||| ||||||  |||| |||||| ||||||||||||| | |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  19175700 aacacaaatgtgtagaagttaggtcttgttcttgtgtaagcttgcaggctatt-tttcttgtaactctttgtaacactttcatcatagtggattggagag 19175798  T
Q  200 ctgctc 205  Q
     |||||    
T  19175799 ttgctc 19175804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 7289831 - 7289964
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||| ||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  7289831 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatatagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 7289929  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7289930 gtaacactttc-tcatattggattggagagctgctc 7289964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 25328184 - 25328316
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  |  |||||||||| |||    
T  25328184 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggcta--gagtcttgtaacctttt 25328281  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25328282 gtaacactttc-tcatattggattggagagctgctc 25328316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 19752347 - 19752444
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||| |||||||| ||||||||||| | |||||||||||||||| || ||||||||||||||||||    
T  19752347 atgggtagaaattaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaactcattgtaacactttcatcttagtggattggagagctgctc 19752444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23799426 - 23799627
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| ||||||| |||| ||| |  ||||||||||||| ||| ||| ||||||| | |||| ||| |||  ||| |||||||||||| |||||| |    
T  23799426 cattgtaaacaccttgagtagggag-atttcaccattggaaggatcaaaaagcttccttttgtgttttccctt--aggattcatattgtgacagtgggtg 23799522  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  |||| |||||| ||||||||||||| |||||| |  |||||||||| |||| ||||||||||||||||| ||||||||||    
T  23799523 acacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggag 23799619  T
Q  198 agctgctc 205  Q
     |||||||    
T  23799620 ggctgctc 23799627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 26403079 - 26403280
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| ||| ||||||| | |||| ||||||| |  | ||||||||||||||||| | |    
T  26403079 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaaagcttccttttgtgttttctcttat--gattcatattgtgagagtgagtg 26403175  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  |||| |||||| ||||| ||||||| |||||| |  ||| | |||| |||| ||||||||||||||||| ||||||||||    
T  26403176 acacaaa-atgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaat--ttcctataactcttttgtaacactttcatcatagtggattggag 26403272  T
Q  198 agctgctc 205  Q
    ||||||||    
T  26403273 agctgctc 26403280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 6127365 - 6127268
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| || |||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| ||||||||||||||||||    
T  6127365 atgggtagaaattaggtcttgttcttttgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctc 6127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 6813782 - 6813730
Alignment:
Q  154 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||||| |||||  |||||||||| |||||||||||||||||||||    
T  6813782 tttcttgtaacccctttgtgtcactttcatcttattggattggagagctgctc 6813730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 39784813 - 39784860
Alignment:
Q  156 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||    
T  39784813 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctc 39784860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 9054835 - 9054887
Alignment:
Q  154 tttcttgtaacc-ctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||||| ||||||| |||||||||| || |||||| |||||||||||    
T  9054835 tttcttgtaaccactttgtatcactttcatcttagtggattagagagctgctc 9054887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 5674615 - 5674820
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5674615 cattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 5674714  T
Q  101 acacgtatgggtagaatctagggcttgttt-ttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||  | |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5674715 acaccaaagggtagaatctaggtcttgtttcttgtgtaagcttgcaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 5674814  T
Q  200 ctgctc 205  Q
    ||||||    
T  5674815 ctgctc 5674820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22709257 - 22709065
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||| ||||||| |  ||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22709257 cattgtaaacaccttggatagtgag-atttcaccattggaaggatcaaaaacttcctcttgtgtcttctcttttagggttcatattgtgagagtggggaa 22709159  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||||| |||||| ||||||||||||| |||||||| ||||          ||||||||||||||||||| |||||||||||||    
T  22709158 acacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttc----------ttgtaacactttcatcatagtggattggagagc 22709070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21356284 - 21356083
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||| ||||||||||||| |||||||||| | ||||||| ||||| ||||||||| |||| ||||||| | |    
T  21356284 cattgtaaacaccttgggtagtgag-atttcatcattggaagaatcaaaagcttccttttgtgtcttttcttt-agggttcattattgagagagtgag-a 21356188  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||||| ||||||||||||| ||| |||| ||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  21356187 aacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttatt-tttcttgtaactcttagtaacactttcatcatagtggattggagag 21356089  T
Q  200 ctgctc 205  Q
    ||||||    
T  21356088 ctgctc 21356083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 5757328 - 5757528
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| ||||||||||   ||||||||||||| ||||||||| |||| ||||| | |||    
T  5757328 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttccgtgtcttctcttt-agggttcattattgagagagagtgga 5757425  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    | |||  ||||||||||  |||| |||||| |||| |||||||| ||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||    
T  5757426 a-cacaaatgggtagaaattaggtcttgttcttgtataagcttgcaagctatt--ttcttgtaactctttgtaacactttcatcatagtggattggagag 5757522  T
Q  200 ctgctc 205  Q
    ||||||    
T  5757523 ctgctc 5757528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 11857154 - 11857021
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  11857154 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 11857056  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11857055 gtaacactttc-tcatattggattggagagctgctc 11857021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 22010602 - 22010735
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||||||||||||||||| |   | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  22010602 ttttagggttcatattgtgagagtggggaaatatcaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 22010700  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  22010701 gtaacactttc-tcatattggattggagagctgctc 22010735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 14737482 - 14737614
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||  | ||| ||||||||| ||||  |  |||||||||| |||    
T  14737482 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggcta--gagtcttgtaacctttt 14737579  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14737580 gtaacactttc-tcatattggattggagagctgctc 14737614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 14742342 - 14742474
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||  | ||| ||||||||| ||||  |  |||||||||| |||    
T  14742342 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggcta--gagtcttgtaacctttt 14742439  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14742440 gtaacactttc-tcatattggattggagagctgctc 14742474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 28155477 - 28155607
Alignment:
Q  72 tttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaa-gcttgaaagctattgtttcttgtaaccctttg 170  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||||| ||||||| |||||  ||||||| ||||||||||||    ||||||||||| ||||    
T  28155477 tttagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctaaa--ttcttgtaaccttttg 28155573  T
Q  171 taacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| ||||||||||||||||||||||||    
T  28155574 taacactttc-tcatattggattggagagctgctc 28155607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 28184684 - 28184552
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  |  | |||||||| |||    
T  28184684 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggcta--gagtgttgtaacctttt 28184587  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||| ||||||||||||||||    
T  28184586 gtaacactttc-tcatattagattggagagctgctc 28184552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 31086426 - 31086523
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||| | ||||||||||||  |||||| |  |||||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  31086426 atgggtagaaattaggtcttgctcttgtgtaagcttataagctaat--ttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctc 31086523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 18233093 - 18232900
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttca-tattgtgagagtggg-g 98  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | |||| |||||  ||||| |||| ||||| ||| ||||| |    
T  18233093 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttctc--ttaggattcattattgagagtgtgggtg 18232997  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  |||| |||||| ||||||||||||  ||||  |  ||||||||||| | |||||||||||||||||||| || |||||||    
T  18232996 acaca-aaatgggtagaaattaggtcttgttcttgtgtaagcttataagc--tgatttcttgtaactcttttgtaacactttcatcatagtgaattggag 18232900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 5572206 - 5572291
Alignment:
Q  119 tagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    |||| |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  5572206 taggtcttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 5572291  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 31979759 - 31979560
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-ga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | |||| |||||  ||||| |||  |||| ||| ||||| ||    
T  31979759 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttctc--ttaggattc--attgagagtgtgggtga 31979665  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggaga 198  Q
     |||   ||||||||||  |||| |||||| || |||||||||  ||| ||   ||||||||||| | |||| |||||||||||| || ||||||||||     
T  31979664 cacaaaaatgggtagaaattaggtcttgttcttttgtaagcttataagtta--atttcttgtaactcttttgcaacactttcatcttagtggattggagg 31979567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 10077118 - 10077215
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| || |||||||||  |||||| |  ||||||||||  ||| ||||||||||||||||| |||||||||| |||||||    
T  10077118 atgggtagaaattaggtcttgttcttttgtaagcttataagctaat--ttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctc 10077215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 22963798 - 22963746
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  22963798 tttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 22963746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 23824595 - 23824647
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  23824595 tttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 23824647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 4630039 - 4630001
Alignment:
Q  167 tttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  4630039 tttgtaacactttcatcttagtggattggagagctgctc 4630001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 6438595 - 6438548
Alignment:
Q  156 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||    
T  6438595 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctc 6438548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 16838923 - 16838791
Alignment:
Q  72 tttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaa-gcttgaa-agctattgtttcttgtaacccttt 169  Q
    ||||||||||||| ||||||  |||| ||| ||  | ||||||| ||||||| |||||  ||||||| ||||||| |||||  | |||||||||| ||||    
T  16838923 tttagggttcatagtgtgaggatgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatagcta--gattcttgtaactcttt 16838827  T
Q  170 -gtaacactttcatcatattggattggagagctgctc 205  Q
     ||||||| |||| |||||||||||||||||||||||    
T  16838826 tgtaacacattca-catattggattggagagctgctc 16838791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 21801342 - 21801394
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||| |||||||||| ||| || ||||||||||||||||||    
T  21801342 tttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctc 21801394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 1533289 - 1533494
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1533289 cattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggaaa 1533388  T
Q  101 acacgtatgggtagaatctagggcttgttt-ttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||  | |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1533389 acaccaaagggtagaatctaggtcttgtttcttgtgtaagcttgcaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 1533488  T
Q  200 ctgctc 205  Q
     |||||    
T  1533489 atgctc 1533494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 2058220 - 2058012
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccatt---ggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg 97  Q
    |||||||||||||||||||||||||||| |||  | |   || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058220 cattgtaatcaccttgggtagtgaggagttcattagttgggggaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg 2058121  T
Q  98 gaaaca-cgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattgga 196  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058120 gaaacaacatatgggtagaatctagggcttgttcttgtgtaagcttgaatgctattgtttcttgtaaccctttgtaacactttcatcatattggattgga 2058021  T
Q  197 gagctgctc 205  Q
    |||||||||    
T  2058020 gagctgctc 2058012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 20357392 - 20357597
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20357392 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 20357491  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggaga 198  Q
    ||||| ||||||||||||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20357492 aacacatatgggtagaatctagggcatgttcttgtgtaaagcttgaaggctattgtttcttgtaaccctttgtaacactttc-tcatattggattggaga 20357590  T
Q  199 gctgctc 205  Q
    |||||||    
T  20357591 gctgctc 20357597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21640057 - 21639855
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21640057 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 21639959  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  21639958 acacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcattatagtggattggagagc 21639860  T
Q  201 tgctc 205  Q
    |||||    
T  21639859 tgctc 21639855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21646255 - 21646053
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21646255 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaatcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 21646157  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  21646156 acacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttttaacactttcatcatagtggattggagagc 21646058  T
Q  201 tgctc 205  Q
    |||||    
T  21646057 tgctc 21646053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 18413884 - 18413686
Alignment:
Q  4 tgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaaaca 103  Q
    ||||| |||||||||||||||| |  ||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  18413884 tgtaaacaccttgggtagtgag-atttcaccattggaaggatcttaagcttcctcttgtgtcttc-cttttagggttcatattgtgagagtggggaaaca 18413787  T
Q  104 cgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgc 203  Q
    |  |||||||||| ||||| |||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18413786 caaatgggtagaaactaggacttgttcttgtgtaagcttgcaatctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagctgc 18413688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 18409011 - 18408810
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||  ||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  18409011 cattgtaaacaccttgggtagtgag-atttcaccattaaaaggatcttaagcttcctcttgtgtcttc-cttttagggttcatattgtgagagtggggaa 18408914  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||||| |||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  18408913 acacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagttatt-tttcttgtaaccctttgtaacactttcatcatactggattggagagc 18408815  T
Q  201 tgctc 205  Q
    |||||    
T  18408814 tgctc 18408810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 2479583 - 2479383
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| |  | |||||||||| ||||||||| |||| ||||||||| |    
T  2479583 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttatatcttctcttt-agggttcattattgagagagtggg-a 2479487  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||||| ||||||||||||| ||||||||  ||||| |||| ||||||||||||||||||||| |||||| |||||    
T  2479486 aacacacatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttataactctttgtaacactttcatcatagtggatttgagag 2479389  T
Q  200 ctgctc 205  Q
    ||||||    
T  2479388 ctgctc 2479383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21983533 - 21983331
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-ga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||  ||||||||| | |||| |||||||| |||||||||||| |||||||||| ||    
T  21983533 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcataagcttccttttgtgttttctcttt-agggttcatattttgagagtgggtga 21983436  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt--gtaacactttcatcatattggattggag 197  Q
     |||   |||||||||| ||||| |||||| ||||||||||||| ||||||||  |||||||||| ||||  ||||||||||||||||| ||||||||||    
T  21983435 cacaaa-atgggtagaaactaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttttgtaacactttcatcatagtggattggag 21983339  T
Q  198 agctgctc 205  Q
    ||||||||    
T  21983338 agctgctc 21983331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 201
Target Start/End: Complemental strand, 12406512 - 12406382
Alignment:
Q  70 cttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctt 168  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| ||    
T  12406512 cttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaaccttt 12406414  T
Q  169 tgtaacactttcatcatattggattggagagct 201  Q
    |||||||||||| ||||||||||||||||||||    
T  12406413 tgtaacactttc-tcatattggattggagagct 12406382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 44848567 - 44848734
Alignment:
Q  35 attggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttg 133  Q
    |||||||| ||| |||||||||| | ||||||||||||| || |||||| |||| ||||||||| ||||||  ||||||||||  |||| ||| || |||    
T  44848567 attggaaggatcaaaagcttccttttgtgtcttctcttt-agagttcattattgagagagtggg-aaacacaaatgggtagaaattaggtcttattcttg 44848664  T
Q  134 tgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| ||||| ||  |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  44848665 tgtaagcttgcaagctttt--ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctc 44848734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 29160052 - 29159850
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| |||||||||||||||| |  ||| ||||||||| ||| ||| ||||||| | |||| |||||||  ||| ||||||||||||||||||| |    
T  29160052 cattgtaaacaccttgggtagtgag-atttcaacattggaaggatcaaaaagcttccttttgtgttttctctt--aggattcatattgtgagagtgggtg 29159956  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  |||| |||||| ||||||||||||| |||||| |  |||||||||| |||| ||||||||||||||||| ||||||||||    
T  29159955 acacaaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggag 29159858  T
Q  198 agctgctc 205  Q
    ||||||||    
T  29159857 agctgctc 29159850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 71 - 202
Target Start/End: Complemental strand, 12397091 - 12396961
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||||||||| |||||||||||||  | ||||||||||||||| |||||  ||||| ||| || || ||||  | ||||||||||| |||    
T  12397091 ttttagggttcatattgtgatagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagattaaaggctagag-ttcttgtaacctttt 12396993  T
Q  170 gtaacactttcatcatattggattggagagctg 202  Q
    ||||||||||| |||||||||||||||||||||    
T  12396992 gtaacactttc-tcatattggattggagagctg 12396961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 2580533 - 2580437
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| ||||| |||||| ||||||||||||| ||||||||  |||||||||| | |||||||||||||||| || ||||||||||||||||||    
T  2580533 atgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt--ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctc 2580437  T

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Target: chr7; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 9189961 - 9190058
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||| |||||||| ||||||||||| | |||||||||||||||| || ||||||||||||||||||    
T  9189961 atgggtagaaattaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaactcattgtaacactttcatcttagtggattggagagctgctc 9190058  T

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Target: chr7; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 24024232 - 24024364
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||  |||||||||||| ||| ||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  |  |||||||||  |||    
T  24024232 ttttagggttcatcgtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggcta--gagtcttgtaacatttt 24024329  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  24024330 gtaacactttc-tcatattggattggagagctgctc 24024364  T

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Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 31109489 - 31109621
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtg-taagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| |   | ||||||||||||||| |||||  ||||  ||||||||| ||||  |  |||||||||| |||    
T  31109489 ttttagggttcatagtgtgagagtgggaaaatatcaaagggtagaatctagggtttgttcatgtgcaaagcttgaaggcta--gagtcttgtaacctttt 31109586  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31109587 gtaacactttc-tcatattggattggagagctgctc 31109621  T

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Target: chr7; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 47263913 - 47263764
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    ||||||||  ||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||| ||| ||||||||| |||| ||||||||| |    
T  47263913 cattgtaaataccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctattt-agggttcattattgagagagtggg-a 47263817  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctatt 152  Q
    |||||  |||| |||||  |||| |||||| ||||||||||||| ||||||||    
T  47263816 aacacaaatggatagaaattaggtcttgttcttgtgtaagcttgcaagctatt 47263764  T

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Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21989155 - 21988953
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-ga 99  Q
    |||||||| ||||||||||||||| ||  | ||||||||||| |||  ||||||||| || ||| ||||| ||||||||||||||| | |||||||| ||    
T  21989155 cattgtaaacaccttgggtagtga-gattttaccattggaaggatcataagcttcctttattgttttctc-tttagggttcatatttttagagtgggtga 21989058  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccc--tttgtaacactttcatcatattggattggag 197  Q
     |||   |||||||||| |||||  || || |||| |||||||| || ||||  ||||||||||| |  |||||||||||||||||| | ||||||||||    
T  21989057 caca-aaatgggtagaaactaggttttattcttgtataagcttgcaatctat--tttcttgtaactctttttgtaacactttcatcaaagtggattggag 21988961  T
Q  198 agctgctc 205  Q
    || |||||    
T  21988960 agttgctc 21988953  T

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Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 56091 - 55994
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  56091 atgggtagaaattaggtcttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 55994  T

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Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 2647649 - 2647746
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  2647649 atgggtagaaattaggtcttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 2647746  T

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Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 19992408 - 19992360
Alignment:
Q  156 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19992408 tcttgtaaccttttgtaacactttca-catattggattggagagctgctc 19992360  T

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Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 46516263 - 46516360
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  || | |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  46516263 atgggtagaaattatgtcttgttcttgtgtaagcttttaagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 46516360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 49091805 - 49091708
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  ||| ||   ||||||||||| | |||||||||||||||||||| |||||||||||| |||||    
T  49091805 atgggtagaaattaggtcttgttcttgtgtaagcttataaggta--atttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctc 49091708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 20284230 - 20284136
Alignment:
Q  109 gggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||  |||| |||||| || |||||||||  |||||| |  |||||||||| | |||||||||||||||| || |||||||||| |||||||    
T  20284230 gggtagaaattaggacttgttcttttgtaagcttataagctaat--ttcttgtaacgcattgtaacactttcatcttagtggattggagggctgctc 20284136  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 4866820 - 4866777
Alignment:
Q  161 taaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||    
T  4866820 taaccttttgtaacactttc-tcatattggattggagagctgctc 4866777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 23402967 - 23403063
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| || |||||||||  |||||| |  |||||||||| | |||||||||||||||| || | |||||||| |||||||    
T  23402967 atgggtagaaattaggacttgttcttttgtaagcttataagctaat--ttcttgtaactcattgtaacactttcatcttagtagattggagggctgctc 23403063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 9185128 - 9185189
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||  |||| |||||| ||||||||||||| |||||||| ||||||||||| ||||    
T  9185128 atgggtagaaattaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaacacttt 9185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 16880169 - 16880120
Alignment:
Q  155 ttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| |||||||| || |||| |||||||||||||||||||||||    
T  16880169 ttcttgtaactctttgtaaaacattca-catattggattggagagctgctc 16880120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 16885025 - 16884976
Alignment:
Q  155 ttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| |||||||| || |||| |||||||||||||||||||||||    
T  16885025 ttcttgtaactctttgtaaaacattca-catattggattggagagctgctc 16884976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 5817268 - 5817320
Alignment:
Q  154 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||||| |||||| |||||||||  || ||||||||||||||||||    
T  5817268 tttcttgtaacccctttgtatcactttcatattagtggattggagagctgctc 5817320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 28617223 - 28617275
Alignment:
Q  154 tttcttgtaaccct-ttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||||||  ||||| |||||||||| || ||||||||||||||||||    
T  28617223 tttcttgtaaccccattgtatcactttcatcttagtggattggagagctgctc 28617275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 33332448 - 33332500
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||| |||||||||||||| || |||||||||| |||||||    
T  33332448 tttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctc 33332500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 2671431 - 2671636
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2671431 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 2671530  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||| |||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2671531 aacacatatgggtagaatctagggcttggtcttgtgtaagcttgcaatctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 2671630  T
Q  200 ctgctc 205  Q
    ||||||    
T  2671631 ctgctc 2671636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 40372641 - 40372845
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40372641 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattatgagagtgggga 40372740  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40372741 aacacatatgggtagaatctagggcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatattggattggagag 40372839  T
Q  200 ctgctc 205  Q
    ||||||    
T  40372840 ctgctc 40372845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 7167496 - 7167291
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7167496 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 7167397  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    || ||  | ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7167396 aataccaaagggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 7167297  T
Q  200 ctgctc 205  Q
    ||||||    
T  7167296 ctgctc 7167291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 8738908 - 8739113
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8738908 cattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtcttctcttctagggttcatattgtgagagtgggga 8739007  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    || || |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8739008 aatacatatgggtagaatctagggattgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 8739107  T
Q  200 ctgctc 205  Q
    ||||||    
T  8739108 ctgctc 8739113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 9091146 - 9091351
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9091146 cattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtcttctcttctagggttcatattgtgagagtgggga 9091245  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    || || |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9091246 aatacatatgggtagaatctagggattgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 9091345  T
Q  200 ctgctc 205  Q
    ||||||    
T  9091346 ctgctc 9091351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 8477616 - 8477409
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggg- 98  Q
    |||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8477616 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggg 8477517  T
Q  99 aaacacgtatgggtagaatctagggcttgttt-ttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggag 197  Q
    ||||||  | |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8477516 aaacaccaaagggtagaatctaggtcttgtttattgtgtaagcttgcaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggag 8477417  T
Q  198 agctgctc 205  Q
    ||||||||    
T  8477416 agctgctc 8477409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 26928438 - 26928641
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| ||||||||||| |||| |  ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26928438 cattgtaaacaccttgggtaatgag-atttcaccattggaaggatcaaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggggaa 26928536  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||     
T  26928537 acacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctattttttcttgtaaccctttgtaacactttcatcatagtggattggagagt 26928636  T
Q  201 tgctc 205  Q
    |||||    
T  26928637 tgctc 26928641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 32143570 - 32143368
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  32143570 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttcctcttgtgtcttctcttttagggttcatattgagagagtggggaa 32143472  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32143471 acacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 32143373  T
Q  201 tgctc 205  Q
    |||||    
T  32143372 tgctc 32143368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 28501542 - 28501747
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28501542 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctcttttagggttcatattgtgagagtgggga 28501641  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggaga 198  Q
    |||||  | ||||||||||||||| || || |||||| ||||||||| ||||  ||||||||||||| |||||||||||||| |||||||||||||||||    
T  28501642 aacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaaccttttgtaacactttc-tcatattggattggaga 28501740  T
Q  199 gctgctc 205  Q
    |||||||    
T  28501741 gctgctc 28501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 28503710 - 28503914
Alignment:
Q  2 attgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    ||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28503710 attgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctcttttagggttcatattgtgagagtggggaa 28503809  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||  | ||||||||||||||| || || |||||| ||||||||| ||||  ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  28503810 acaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaaccttttgtaacactttc-tcatattggattggagag 28503908  T
Q  200 ctgctc 205  Q
    ||||||    
T  28503909 ctgctc 28503914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 27453207 - 27453005
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||| ||||||||||||    
T  27453207 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttttagggttcatattgagagagtggggaa 27453109  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  ||||||||||  ||||  ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  27453108 acacaaatgggtagaaaataggaattgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 27453010  T
Q  201 tgctc 205  Q
    |||||    
T  27453009 tgctc 27453005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 1306197 - 1305996
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  1306197 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcttaagcttcctcttgtgtcttctcttttagggttcatattgagagagtggggaa 1306099  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||| | |||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  1306098 acacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaaactatt-tttcttgtaaccctttgtaacactttcatcgtagtggattggagagc 1306000  T
Q  201 tgct 204  Q
    ||||    
T  1305999 tgct 1305996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 27974791 - 27974992
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| ||||||||| |||| |||| |||| |    
T  27974791 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt-agggttcattattgagagaatggg-a 27974887  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  27974888 aacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaactctttgtaacactttcatcatagtggattggagag 27974986  T
Q  200 ctgctc 205  Q
    ||||||    
T  27974987 ctgctc 27974992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 16264596 - 16264397
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||  ||||||||| |||| ||||||||| |    
T  16264596 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctctt--agggttcatcattgagagagtgggta 16264500  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    | |||  ||| ||||||  |||| |||||| ||||| ||||||| ||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||    
T  16264499 a-cacaaatgtgtagaaattaggtcttgttcttgtggaagcttgcaagctatt--ttcttgtaactctttgtaacactttcatcatagtggattggagag 16264403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 6794554 - 6794753
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||  | | |||||||||| | || | |||||||  |||||||||||||||||||||||  |    
T  6794554 cattgtaaacaccttgggtagtgag-atttcaccattggaatgaacaaaagcttccttttgtattttctctt--agggttcatattgtgagagtgggtga 6794650  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
     |||  ||||||||||  |||| |||||| ||||||||||||| |||||| | ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  6794651 -cacaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctaat-tttcttgtaactctttgtaacactttcatcatagtggattggagagc 6794748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 27986295 - 27986486
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | |||||||||||||||||||| |||||| |||||| |||||    
T  27986295 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttttagggttgatattgagagagt-gggaa 27986392  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  ||||||||||  |||| |||||| ||||||||||||| ||||| || ||||          ||||||||||||||||||| |||||||||||||    
T  27986393 acacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagct-ttttttc----------ttgtaacactttcatcatagtggattggagagc 27986481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 33386514 - 33386706
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttca-tattgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | |||||||||||||||||||||| ||||| |||||| ||||    
T  33386514 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttttagggttcattattgagagagt-ggga 33386611  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||||| ||||||||||||| || ||||| ||||          ||||||||||||||||||| ||||||||||||    
T  33386612 aacacaaatgggtagaaattaggacttgttcttgtgtaagcttgcaaactatt-tttc----------ttgtaacactttcatcatagtggattggagag 33386700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 8370328 - 8370526
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| || ||||||||||||| |  ||||||||||||| ||| |||| ||||| | |||| |||||||  ||| |||||||||||||||||||  |    
T  8370328 cattgtaaacatcttgggtagtgag-atttcaccattggaaggatcaaaagtttccttttgtgttttctctt--aggattcatattgtgagagtgggtga 8370424  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
     |||  ||||||||||  || | |||||| ||||||||||||  |||||| |  |||||||||| ||||||||||||||||||||| |||||||||||||    
T  8370425 -cacaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaat--ttcttgtaactctttgtaacactttcatcatagtggattggagagc 8370521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 22173100 - 22173233
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  22173100 ttttagggttcatattaggagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 22173198  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  22173199 gtaacactttc-tcatattggattggagagctgctc 22173233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 35925725 - 35925529
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | |||| |||||  ||||| |||||||||||||||| |||      
T  35925725 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttctc--ttaggattcatattgtgagagt-gggtg 35925630  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  ||||||||||  ||||  ||||| | ||||||||||  || |||   ||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  35925629 acacaaatgggtagaaattaggttttgttctagtgtaagcttataaacta--atttcttgtaactctttgtaacactttcatcatagtggattggagaac 35925532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 36029340 - 36029141
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-ga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | |||| |||||||  ||| |||||||| |||||||| | ||    
T  36029340 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttctctt--aggattcatattttgagagtgagtga 36029244  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggaga 198  Q
     |||   ||||||||||  |||| |||||| ||||||||| ||| |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||||    
T  36029243 cacaaa-atgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggaga 36029147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 21711469 - 21711270
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtg-ggga 99  Q
    |||||||| ||||||| |||||||| |  ||||||||||||| ||| |||||||||| | |||| |||||||  ||| |||||  | |||||||| |||     
T  21711469 cattgtaaacaccttgagtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttctctt--aggattcattat-tgagagtgtgggt 21711374  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||| | ||||||||||||  |||||| |  |||||||||| ||||||||||||||||||||| |||||| |||||    
T  21711373 aacacaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaat--ttcttgtaactctttgtaacactttcatcatagtggatttgagag 21711276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 40592621 - 40592818
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatc-taaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| ||||||||||||||| ||  ||||||||||||| |||  |||||||||| | |||| |||||  ||||| ||||||||||||||||||| |    
T  40592621 cattgtaaacaccttgggtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctc--ttaggattcatattgtgagagtgggtg 40592717  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  |||   ||||| ||||||||||||| ||||||   ||||||||||| | |||||||||||||||||||| | ||||||||    
T  40592718 acaca-aaatgggtagaaattagattttgttcttgtgtaagcttgtaagcta--atttcttgtaactcttttgtaacactttcatcatagtcgattggag 40592814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 3715841 - 3716042
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| ||| |||| || | |||| |||||||  ||| |||||||||||| |||||| |    
T  3715841 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaaagctttcttttgtgttttctctt--aggattcatattgtgaaagtgggtg 3715937  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  || | |||||| ||||||||| ||| |||||| |  |||||||||| |||| ||||||||||||||||| | ||||||||    
T  3715938 acacaaa-atgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaat--ttcttgtaactcttttgtaacactttcatcatagtagattggag 3716034  T
Q  198 agctgctc 205  Q
    ||||||||    
T  3716035 agctgctc 3716042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 18552826 - 18552923
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  18552826 atgggtagaaattaggtcttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 18552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 18656609 - 18656482
Alignment:
Q  75 agggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaa-gcttgaaagctattgtttcttgtaaccctttgtaa 173  Q
    |||||| ||| |||||||||||| ||| ||  | ||||||| ||||||| |||||  ||||||| ||||||| ||||  ||  ||||||||| |||||||    
T  18656609 agggtttatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaatgctagagt--cttgtaaccttttgtaa 18656513  T
Q  174 cactttcatcatattggattggagagctgctc 205  Q
    ||||||| ||||||||||||||||||||||||    
T  18656512 cactttc-tcatattggattggagagctgctc 18656482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 1736248 - 1736345
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  ||| ||   ||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  1736248 atgggtagaaattaggtcttgttcttgtgtaagcttataagtta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 1736345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 39032393 - 39032485
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtg 95  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||  ||||||||||| |||| |||||||    
T  39032393 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctc--ttagggttcatcattgagagagtg 39032485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 40844795 - 40844698
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| |||||| ||| |||||||    
T  40844795 atgggtagaaattaggtcttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctc 40844698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 48438358 - 48438261
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  | ||||   ||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  48438358 atgggtagaaattaggtcttgttcttgtgtaagcttatatgcta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 48438261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 4386915 - 4386967
Alignment:
Q  154 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||||| |||||| |||||| ||| |||||||||||||||||||||    
T  4386915 tttcttgtaacccatttgtatcacttttatcttattggattggagagctgctc 4386967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 25795925 - 25795828
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| || |||||||||  |||||| |  |||||||||| |||| |||||||||||||| || | ||||||||||||||||    
T  25795925 atgggtagaaattaggtcttgttcttttgtaagcttataagctaat--ttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctc 25795828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 30709733 - 30709830
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||| | ||||||||||||  ||||||   ||||||||||| | ||||||||| |||||||||| |||||||||| |||||||    
T  30709733 atgggtagaaattaggtcttgctcttgtgtaagcttataagcta--atttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctc 30709830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 3328300 - 3328396
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| || |||||||||  |||||| |  |||||||||| | |||||||||||||||| || ||||||| || |||||||    
T  3328300 atgggtagaaattaggacttgttcttttgtaagcttataagctaat--ttcttgtaactcattgtaacactttcatcttagtggattgaagggctgctc 3328396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 202
Target Start/End: Original strand, 3323679 - 3323727
Alignment:
Q  154 tttcttgtaaccctttgtaacactttcatcatattggattggagagctg 202  Q
    ||||||||||| | |||||||||||||||| || |||||||||| ||||    
T  3323679 tttcttgtaactcattgtaacactttcatcttagtggattggagggctg 3323727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 26299087 - 26299035
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||| ||||||||||||||||| | |||||||| |||||||    
T  26299087 tttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctc 26299035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 3e-84; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 24742192 - 24741987
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742192 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 24742093  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  | ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742092 aacaccaaagggtagaatctagggtttgttcttgtgtaagcttgaaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 24741993  T
Q  200 ctgctc 205  Q
    ||||||    
T  24741992 ctgctc 24741987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 29760892 - 29760688
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  29760892 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctctt--agggttcatagtgtgagagtgggga 29760795  T
Q  100 aacacgtatgggtagaatctagggcttgttt-ttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggaga 198  Q
    |||||  | |||||||||||||| ||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29760794 aacaccaaagggtagaatctaggtcttgtttcttgtgtaagcttgcaggctattgtttcttgtaaccctttgtaacactttcatcatattggattggaga 29760695  T
Q  199 gctgctc 205  Q
    |||||||    
T  29760694 gctgctc 29760688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 31985483 - 31985684
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||  |  ||||||| ||||| ||| |||||||||| | |||||||||||||||||||||| |||||||||||||| ||    
T  31985483 cattgtaaacaccttgggtagtgaa-atttcaccatgggaaggatcaaaagcttccttttgtgtcttctcttttagggttcacattgtgagagtggg-aa 31985580  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  ||||||||||  |||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31985581 acacaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 31985679  T
Q  201 tgctc 205  Q
    |||||    
T  31985680 tgctc 31985684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 28468387 - 28468579
Alignment:
Q  2 attgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaaa 101  Q
    ||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  28468387 attgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgagagagtggggaaa 28468485  T
Q  102 cacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagct 201  Q
    |||  |||||||||||||||| |||||| ||||||||||||| || ||||| ||||          ||||||||||||||||||| ||||||||||||||    
T  28468486 cacaaatgggtagaatctaggtcttgttattgtgtaagcttgcaaactattttttc----------ttgtaacactttcatcatagtggattggagagct 28468575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 5396521 - 5396721
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||||||| ||||||| || | ||||||||||||| ||||||||| |||| ||||||| | |    
T  5396521 cattgtaaacaccttgggtagtgag-atttcaccattggaagaatcaaaagctttcttttgtgtcttctcttt-agggttcatcattgagagagtgagta 5396618  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    | |||  ||||||||||  |||| |||||| ||||||||||||| ||||||||  |||||||||| ||||| ||||||||||||||| ||||||||||||    
T  5396619 a-cacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgcaacactttcatcatagtggattggagag 5396715  T
Q  200 ctgctc 205  Q
    ||||||    
T  5396716 ctgctc 5396721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 51520637 - 51520504
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  51520637 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 51520539  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  51520538 gtaacactttc-tcatattggattggagagctgctc 51520504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 16623143 - 16623343
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-ga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | |||| ||||  |||||| ||||||||||||||||||| ||    
T  16623143 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttct--tttaggattcatattgtgagagtgggtga 16623239  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggaga 198  Q
     |||   ||||||||||  |||| |||||| || |||||||||   |||||   ||||||||||| | |||||||||||||||||||| |||||||||||    
T  16623240 caca-aaatgggtagaaattaggtcttgttcttctgtaagcttattagcta--atttcttgtaactcttttgtaacactttcatcatagtggattggaga 16623336  T
Q  199 gctgctc 205  Q
    |||||||    
T  16623337 gctgctc 16623343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 9224312 - 9224445
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||||||||||  | ||||||| ||||||| |||||  ||||| ||||||||| ||||  | ||||| ||||| |||    
T  9224312 ttttagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttctaacctttt 9224410  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9224411 gtaacactttc-tcatattggattggagagctgctc 9224445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 9229099 - 9229232
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||||||||||  | ||||||| ||||||| |||||  ||||| ||||||||| ||||  | ||||| ||||| |||    
T  9229099 ttttagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttctaacctttt 9229197  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9229198 gtaacactttc-tcatattggattggagagctgctc 9229232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 45357203 - 45357334
Alignment:
Q  72 tttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctttg 170  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||  ||||| ||||||||||||||  |  |||||||||| ||||    
T  45357203 tttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta--gagtcttgtaaccttttg 45357300  T
Q  171 taacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| ||||||||||||||||||||||||    
T  45357301 taacactttc-tcatattggattggagagctgctc 45357334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 30 - 205
Target Start/End: Complemental strand, 5147897 - 5147724
Alignment:
Q  30 tcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-gaaacacgtatgggtagaatctagggcttgt 128  Q
    ||||||||||||| |||  ||||||||| | |||| |||||||| |||||||||||||||||| |||| || |||   ||||||||||  |||| |||||    
T  5147897 tcaccattggaaggatcataagcttccttttgtgttttctcttt-agggttcatattgtgagaatgggtgacacaaa-atgggtagaaattaggccttgt 5147800  T
Q  129 ttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    | ||||||||||||| ||||||||  ||||||||||  ||| ||||||||||||||||| |||| |||||||||||||    
T  5147799 tcttgtgtaagcttgcaagctatt--ttcttgtaactattttgtaacactttcatcataatggactggagagctgctc 5147724  T

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Target: chr4; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 3777796 - 3777600
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| |||||||||||||||| |  ||||||||||||  ||| ||| ||||||| | || | |||||||  ||| ||||||||||||||||||| |    
T  3777796 cattgtaaacaccttgggtagtgag-atttcaccattggaatgatcaaaaagcttccttttgtattttctctt--aggattcatattgtgagagtgggtg 3777700  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggaga 198  Q
    | |||   ||||||||||  |||  |||||| ||||||||| ||| ||||||||  |||||||||| ||||||||||||||||||||| |||||||||||    
T  3777699 acacaaa-atgggtagaaattagatcttgttcttgtgtaagtttgcaagctatt--ttcttgtaactctttgtaacactttcatcatagtggattggaga 3777603  T

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Target: chr4; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 45347723 - 45347855
Alignment:
Q  72 tttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctttg 170  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  |  |||||||||| ||||    
T  45347723 tttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-gtcttgtaaccttttg 45347821  T
Q  171 taacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| ||||||||||||||||||||||||    
T  45347822 taacactttc-tcatattggattggagagctgctc 45347855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 3814202 - 3814071
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaa-gcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||| ||||||| |||||  ||||||| ||||||||||||  ||  ||||||||| |||    
T  3814202 ttttagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 3814106  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||||| |||||||||||||||||||||||    
T  3814105 gtaacactttca-catattggattggagagctgctc 3814071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 36315183 - 36315279
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||| | ||||||||||||  |||||| |  |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  36315183 atgggtagaaattaggtcttgctcttgtgtaagcttctaagctaat--ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctc 36315279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 36329392 - 36329488
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||| | ||||||||||||  |||||| |  |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  36329392 atgggtagaaattaggtcttgctcttgtgtaagcttctaagctaat--ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctc 36329488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 205
Target Start/End: Complemental strand, 5143505 - 5143306
Alignment:
Q  3 ttgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgg-ggaaa 101  Q
    |||||| |||||| ||||||||| |  ||||||||||||| |||  ||||||||| | |||| |||||||| |||||||||||| |||||||||  || |    
T  5143505 ttgtaaacaccttaggtagtgag-atttcaccattggaaggatcataagcttccttttgtgttttctcttt-agggttcatattctgagagtggctgaca 5143408  T
Q  102 cacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgt-aaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||   ||| ||||||  |||| |||||| ||||||| ||||| |||||||  |||||||| ||   |||||||||||||||||||| ||| |||||||||    
T  5143407 ca-aaatgagtagaaattaggtcttgttcttgtgtatgcttgcaagctat--tttcttgtaaattttttgtaacactttcatcatagtgggttggagagc 5143311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 75 - 205
Target Start/End: Complemental strand, 5732839 - 5732712
Alignment:
Q  75 agggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaa-gcttgaaagctattgtttcttgtaaccctttgtaa 173  Q
    |||||| ||| |||||||||||| ||| ||  | ||||||| ||||||| |||||  ||||||| ||||||||||||  ||  ||||||||| |||||||    
T  5732839 agggtttatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttttgtaa 5732743  T
Q  174 cactttcatcatattggattggagagctgctc 205  Q
    ||||||| ||||||||||||||||||||||||    
T  5732742 cactttc-tcatattggattggagagctgctc 5732712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 8689346 - 8689509
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||| ||| |||||||| ||||||| |  ||||||||||||| ||| |||| ||||| | ||||||||||||  ||||||||| |||| ||||||||| |    
T  8689346 cattttaaacaccttggatagtgag-atttcaccattggaaggatcaaaagtttccttttgtgtcttctctt--agggttcatcattgagagagtggg-a 8689441  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||  || |||||||  |||| |||||| ||||||||||||| |||||||  ||||||||||| ||||    
T  8689442 aacacaaattggtagaaattaggtcttgttcttgtgtaagcttgcaagctat--tttcttgtaacacttt 8689509  T

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Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 16628722 - 16628815
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg 97  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | |||| ||||  |||||| |||||||||||||||||||    
T  16628722 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgttttct--tttaggattcatattgtgagagtggg 16628815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 10047523 - 10047426
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  10047523 atgggtagaaattaggtcttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 10047426  T

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Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 24334058 - 24333856
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatc-taaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgg-gg 98  Q
    |||||||| ||||||||||||||| ||  ||||||||||||| |||  |||||||||| | |||| |||||  ||||| ||||||||||||||||||  |    
T  24334058 cattgtaaacaccttgggtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctc--ttaggattcatattgtgagagtggctg 24333962  T
Q  99 aaacacgtatgggtagaatctagggcttgttt-ttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattgga 196  Q
    | |||   ||||||||||  ||||  || ||| ||||||||||||| ||||||   ||| || |||| | |||||||||| ||||||||| |||||||||    
T  24333961 acaca-aaatgggtagaaattaggttttttttcttgtgtaagcttgtaagcta--attttttataactcttttgtaacacgttcatcatagtggattgga 24333865  T
Q  197 gagctgctc 205  Q
    |||||||||    
T  24333864 gagctgctc 24333856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 56146700 - 56146749
Alignment:
Q  155 ttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  56146700 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctc 56146749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 3796472 - 3796569
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||| ||||||| |||||| |  |||||||||| |||| ||||||||||||||||| |||||| ||||| |||||    
T  3796472 atgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctc 3796569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 16630650 - 16630727
Alignment:
Q  124 cttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctg 202  Q
    |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||||||||    
T  16630650 cttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagagctg 16630727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 38152395 - 38152489
Alignment:
Q  110 ggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||  |||| |||||| ||||||||||||  |||||| |  ||||| |||| |||| |||||||||||| |||| ||||||||||||||||||    
T  38152395 ggtagaaattaggtcttgttcttgtgtaagcttataagctaat--ttcttataactcttttgtaacactttcaccatagtggattggagagctgctc 38152489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 5112336 - 5112284
Alignment:
Q  154 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||||| ||||||||||||||||  || ||||||||||||||||||    
T  5112336 tttcttgtaacccatttgtaacactttcatattagtggattggagagctgctc 5112284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 39246093 - 39246041
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  39246093 tttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 39246041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 6743427 - 6743465
Alignment:
Q  167 tttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  6743427 tttgtaacactttcatcatagtggattggagggctgctc 6743465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 5269204 - 5269241
Alignment:
Q  168 ttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctc 5269241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 18855821 - 18855774
Alignment:
Q  156 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||    
T  18855821 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctc 18855774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 24202617 - 24202819
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    ||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24202617 cattgtaatcaccttgggtagtgag-atctcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 24202715  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24202716 acacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 24202814  T
Q  201 tgctc 205  Q
    |||||    
T  24202815 tgctc 24202819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19358691 - 19358893
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  19358691 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgagagagtggggaa 19358789  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  19358790 acacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 19358888  T
Q  201 tgctc 205  Q
    |||||    
T  19358889 tgctc 19358893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19361280 - 19361482
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  19361280 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgagagagtggggaa 19361378  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  19361379 acacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaaactatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 19361477  T
Q  201 tgctc 205  Q
    |||||    
T  19361478 tgctc 19361482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 19379920 - 19380122
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  19379920 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgagagagtggggaa 19380018  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||||||||| |||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  19380019 acacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaaactatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 19380117  T
Q  201 tgctc 205  Q
    |||||    
T  19380118 tgctc 19380122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 24787209 - 24787414
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||| ||||||||||||| ||||||||| |||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24787209 cattataatcaccttgggcagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagttggga 24787308  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaa-gcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggaga 198  Q
    |||||  | ||||||||||||||  ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24787309 aacaccaaagggtagaatctaggatttgttcttgtgtaatgcttgaaggctattgtttcttgtaaccctttgtaacactttc-tcatattggattggaga 24787407  T
Q  199 gctgctc 205  Q
    |||||||    
T  24787408 gctgctc 24787414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 19366157 - 19366297
Alignment:
Q  2 attgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaaa 101  Q
    ||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  19366157 attgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgagagagtggggaaa 19366255  T
Q  102 cacgtatgggtagaatctagggcttgtttttgtgtaagcttg 143  Q
    |||  |||||||||||||||| |||||| |||||||||||||    
T  19366256 cacaaatgggtagaatctaggtcttgttcttgtgtaagcttg 19366297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 13604472 - 13604673
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| ||||||||| |||| ||||||||| |    
T  13604472 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt-agggttcattattgagagagtggg-a 13604568  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||||| ||||||||| ||| |||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||    
T  13604569 aacacaaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatt-tttcttgtaactctttgtaacattttcatcatagtggattggagag 13604667  T
Q  200 ctgctc 205  Q
    ||||||    
T  13604668 ctgctc 13604673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 3281954 - 3281755
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||  ||||||||| |||| ||||||||| |    
T  3281954 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctctt--agggttcatcattgagagagtggg-a 3281859  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||||| ||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||  ||||||||||||    
T  3281858 aacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacactttcatcatcgtggattggagag 3281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 26644748 - 26644947
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| ||||||| |||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||  ||||||||| |||| ||||||| | |    
T  26644748 cattgtaaacaccttgagtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctctt--agggttcatcattgagagagtgag-a 26644843  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||||| ||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||    
T  26644844 aacacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacactttcatcataatggattggagag 26644941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 21536420 - 21536619
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| ||||||||||||| || |  ||||||||||||| ||| |||||||||| | ||||||||||||  ||||||||| |||| ||||||||| |    
T  21536420 cattgtaaacaccttgggtagtaag-atttcaccattggaaggatcgaaagcttccttttgtgtcttctctt--agggttcatcattgagagagtgggta 21536516  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    | |||  | ||||||||  || |  ||||| ||||||||||||| ||||||||  |||||||||| ||||||||||||||||| ||| ||||||||||||    
T  21536517 a-cacaaacgggtagaaattaagtattgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacactttcattatagtggattggagag 21536613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 41390760 - 41390628
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  |  |||||||||| |||    
T  41390760 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggcta--gagtcttgtaacctttt 41390663  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  41390662 gtaacactttc-tcatattggattggagagctgctc 41390628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 41398415 - 41398283
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  |  |||||||||| |||    
T  41398415 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggcta--gagtcttgtaacctttt 41398318  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  41398317 gtaacactttc-tcatattggattggagagctgctc 41398283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 32889583 - 32889486
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||| |||||||| ||||||||||| | |||||||||||||||| || ||||||||||||||||||    
T  32889583 atgggtagaaattaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaactcattgtaacactttcatcttagtggattggagagctgctc 32889486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 37070014 - 37069817
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||| || |||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| | ||||||| |||| | ||||||| |    
T  37070014 cattgtaaacaccttggataatgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt-atggttcattattgagtgagtgggta 37069917  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    | |||  ||||||||||  |||| |||||| ||||||||||||| || |||||     ||||||| ||||||||||||||||||||| ||||| ||||||    
T  37069916 a-cacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactatt-----ttgtaactctttgtaacactttcatcatagtggatcggagag 37069823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 47703785 - 47703986
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaag-cttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| |||||||||||||||| |  ||||||||||||  ||  |||  |||||| | |||| |||||||  ||| ||||||||||||||||||| |    
T  47703785 cattgtaaacaccttgggtagtgag-atttcaccattggaatgataaaaaaacttccttttgtgttttctctt--aggattcatattgtgagagtgggtg 47703881  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  |||| |||||| ||||||||||||| |||||| |  |||||||||  |||| ||||||||||||||||| ||||||||||    
T  47703882 acacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaattcttttgtaacactttcatcatagtggattggag 47703978  T
Q  198 agctgctc 205  Q
    ||||||||    
T  47703979 agctgctc 47703986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 25444996 - 25445127
Alignment:
Q  72 tttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaa-gcttga-aagctattgtttcttgtaacccttt 169  Q
    ||||||||||||| |||||||||||| ||| ||  | ||||||  ||||||| |||||  ||||||| |||||| ||||||  ||  ||||||||| |||    
T  25444996 tttagggttcatagtgtgagagtgggaaaataccaaagggtagc-tctagggtttgttcatgtgtaaagcttgataagctagagt--cttgtaacctttt 25445092  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25445093 gtaacactttc-tcatattggattggagagctgctc 25445127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 9476393 - 9476308
Alignment:
Q  119 tagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    |||| |||||| ||||||||||||| |||||| |  ||||| |||| |||| |||| |||||||||||| ||||||||||||||||||    
T  9476393 taggtcttgttcttgtgtaagcttgtaagctaat--ttcttataactcttttgtaatactttcatcatagtggattggagagctgctc 9476308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 16124469 - 16124566
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| || |||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| |||||||||| |||||||    
T  16124469 atgggtagaaattaggtcttgttcttatgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 16124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 27104370 - 27104422
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||||||||||||    
T  27104370 tttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctc 27104422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 47098778 - 47098874
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| || |||||||||  |||||| |  |||||||||| | |||||||||||||||| || |||||||||| |||||||    
T  47098778 atgggtagaaattaggacttgttcttttgtaagcttataagctaat--ttcttgtaactcattgtaacactttcatcttagtggattggagggctgctc 47098874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 19073027 - 19072975
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||| |||||||||||||| || ||||||||||||||||||    
T  19073027 tttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctc 19072975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 19120917 - 19120865
Alignment:
Q  154 tttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| |||| |||||||||||||| || ||||||||||||||||||    
T  19120917 tttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctc 19120865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 29651955 - 29651858
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaa-ccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| ||||||||||||  ||| ||   ||||||||||  | |||||||||||||||||||| |||||||||| |||||||    
T  29651955 atgggtagaaattaggtcttgttcttgtgtaagcttataagtta--atttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgctc 29651858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 39445594 - 39445547
Alignment:
Q  156 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||    
T  39445594 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctc 39445547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 44023864 - 44023911
Alignment:
Q  156 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||    
T  44023864 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctc 44023911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 48382479 - 48382524
Alignment:
Q  154 tttcttgtaaccc-tttgtaacactttcatcatattggattggaga 198  Q
    ||||||||||||  |||||| |||||||||||||||||||||||||    
T  48382479 tttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 24136098 - 24135895
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24136098 cattgtaatcaccttgggtagtgaggagttcaccattggaaggatctaaagcttcctctagtgtcttctcttttagggttcacattgtgagagtggggaa 24135999  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  | |||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| || || |||||| |||    
T  24135998 acaccaaagggtagaatctaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcttagtgcattggatagc 24135900  T
Q  201 tgctc 205  Q
    |||||    
T  24135899 tgctc 24135895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 38219647 - 38219445
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| |||||||||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38219647 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggggaa 38219549  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  38219548 acacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 38219450  T
Q  201 tgctc 205  Q
    |||||    
T  38219449 tgctc 38219445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 35387911 - 35387709
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    ||||||||||||||||||||||||| |  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35387911 cattgtaatcaccttgggtagtgag-atttcaccattggaaggatctaaaacttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 35387813  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||||| ||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||    
T  35387812 acacaaatgggtagaaactaggacttattcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtagattggagagc 35387714  T
Q  201 tgctc 205  Q
    |||||    
T  35387713 tgctc 35387709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 31180465 - 31180261
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||||||||||||||||||||||| |||  | ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31180465 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttatggttcatattgtgagagtgggga 31180366  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggaga 198  Q
    |||||  | ||||||||||||||| ||| | |||||| ||||||||| ||||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  31180365 aacaccaaagggtagaatctagggtttg-tcttgtgtaaagcttgaaggctagagtttcttgtaaccctttgtaacactttc-tcatattggattggaga 31180268  T
Q  199 gctgctc 205  Q
    |||||||    
T  31180267 gctgctc 31180261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 55 - 205
Target Start/End: Complemental strand, 38192369 - 38192220
Alignment:
Q  55 cctctagtgtcttctcttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgt 154  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| |||||| ||||||||||||| |||||||| |    
T  38192369 cctcttgtgtcttctcttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctatt-t 38192271  T
Q  155 ttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38192270 ttcttgtaaccctttgtaacactttcatcatagtggattggagagctgctc 38192220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 30631658 - 30631453
Alignment:
Q  1 cattgtaatcaccttgggtagtg-aggagctcacca-ttggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggg 98  Q
    ||||||||||||||||||||||| ||||| |||  | ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30631658 cattgtaatcaccttgggtagtggaggagttcattagttggaaggatctaaagcttcctctagtgacttctcttt-agggttcatattgtgagagtgggg 30631560  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggag 197  Q
    ||||||  | |||||||||||| || |||||  ||||| ||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  30631559 aaacaccaaagggtagaatctatggtttgttcatgtgtaaagcttgaaggctagagtttcttgtaaccctttgtaacactttc-tcatattggattggag 30631461  T
Q  198 agctgctc 205  Q
    ||||||||    
T  30631460 agctgctc 30631453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 15464777 - 15464579
Alignment:
Q  5 gtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtggggaaaca 103  Q
    |||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||||||||||||| |||||||||||||| |||||    
T  15464777 gtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttttagggttcattattgtgagagtggg-aaaca 15464680  T
Q  104 cgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgc 203  Q
    |  ||||||||||  |||| |||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  15464679 caaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaactctttgtaacactttcatcatagtggattggagagctgc 15464581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 36932198 - 36932400
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||||| ||||||||| ||||||||||||| |||| ||||||||| |    
T  36932198 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttcctcttgtgtcttctgttttagggttcattattgagagagtggg-a 36932295  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  || | |||||| || ||||| |||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  36932296 aacacaaatgggtagaaattaagtcttgttcttatgtaaacttgcaagctatt-tttcttgtaactctttgtaacactttcatcatagtggattggagag 36932394  T
Q  200 ctgctc 205  Q
    ||||||    
T  36932395 ctgctc 36932400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 9353182 - 9353382
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| ||| ||||| |||| ||||||||| |    
T  9353182 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctctttaagg-ttcattattgagagagtggg-a 9353278  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||  |||||| ||||||||||||| ||||| ||  |||||||||| ||||||||||||||||||||| ||||||||||||    
T  9353279 aacacaaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctttt--ttcttgtaactctttgtaacactttcatcatagtggattggagag 9353376  T
Q  200 ctgctc 205  Q
    ||||||    
T  9353377 ctgctc 9353382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 14520477 - 14520277
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcata-ttgtgagagtgggga 99  Q
    |||||||| |||||||| ||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| |||||||||| ||| ||||||||| |    
T  14520477 cattgtaaacaccttggatagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt-agggttcataattgagagagtgggta 14520380  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    | |||  ||||||||||  |||| |||||| ||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||| ||||||| ||||    
T  14520379 a-cacaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacactttcatcatagtggattgaagag 14520283  T
Q  200 ctgctc 205  Q
    ||||||    
T  14520282 ctgctc 14520277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 1457067 - 1457200
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  1457067 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 1457165  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1457166 gtaacactttc-tcatattggattggagagctgctc 1457200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 27445150 - 27445017
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  27445150 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 27445052  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27445051 gtaacactttc-tcatattggattggagagctgctc 27445017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 27449994 - 27449861
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  27449994 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 27449896  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27449895 gtaacactttc-tcatattggattggagagctgctc 27449861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 43592459 - 43592326
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  43592459 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 43592361  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43592360 gtaacactttc-tcatattggattggagagctgctc 43592326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 43598904 - 43598771
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  43598904 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 43598806  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43598805 gtaacactttc-tcatattggattggagagctgctc 43598771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 43604396 - 43604263
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  43604396 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 43604298  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43604297 gtaacactttc-tcatattggattggagagctgctc 43604263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 43609888 - 43609755
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    ||||||||||||||||  ||||||||||||||||  | ||||||||||||||| |||||  ||||| ||||||||| ||||  | ||||||||||| |||    
T  43609888 ttttagggttcatattaagagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 43609790  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43609789 gtaacactttc-tcatattggattggagagctgctc 43609755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 15044865 - 15044733
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||  ||||| ||||||||||||||  |  |||||||||| |||    
T  15044865 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta--gagtcttgtaacctttt 15044768  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15044767 gtaacactttc-tcatattggattggagagctgctc 15044733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 10281999 - 10281798
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaa-gcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-g 98  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| ||| |||| || | |||| |||||||  ||| ||||||||||||| ||||| |    
T  10281999 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaaagctttcttttgtgttttctctt--aggattcatattgtgagtgtgggtg 10281903  T
Q  99 aaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    | |||   ||||||||||  |||| |||||| ||||||||||||| |||||| |  |||||||||| |||| ||||||||||||||||| ||||||||||    
T  10281902 acacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaat--ttcttgtaactcttttgtaacactttcatcatagtggattggag 10281806  T
Q  198 agctgctc 205  Q
    ||||||||    
T  10281805 agctgctc 10281798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 11916822 - 11917022
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggg-ga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| ||| |||||| | |||| |||||||  |||||||||  | |||||||||| ||    
T  11916822 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaaacttccttttgtgttttctctt--agggttcatcgtttgagagtgggtga 11916918  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggaga 198  Q
     |||   ||||||||||  |||| |||||| ||||||||||||| || |||||  |||||||||| |||| ||||||||||||| ||| |||||||||||    
T  11916919 cacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgcaaactatt--ttcttgtaactcttttgtaacactttcattatagtggattggaga 11917015  T
Q  199 gctgctc 205  Q
    |||||||    
T  11917016 gctgctc 11917022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 12084096 - 12084225
Alignment:
Q  73 ttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgta 172  Q
    ||||| |||||||||||||||| |||  ||||  ||||||||||  |||| |||||| ||||||||||||  ||| ||   ||||||||||| |||||||    
T  12084096 ttaggattcatattgtgagagt-gggtgacacaaatgggtagaaattaggtcttgttcttgtgtaagcttttaagtta--atttcttgtaactctttgta 12084192  T
Q  173 acactttcatcatattggattggagagctgctc 205  Q
    |||||||||||||| ||||||||||||||||||    
T  12084193 acactttcatcatagtggattggagagctgctc 12084225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 3880476 - 3880346
Alignment:
Q  74 tagggttcatattgtgagagtggg-gaaacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gt 171  Q
    |||| ||||||||||||||||||| || |||   ||||||||||  |||| |||||| ||||||||||||| || ||| |  |||||||||| |||| ||    
T  3880476 taggattcatattgtgagagtgggtgacacaaa-atgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaat--ttcttgtaactcttttgt 3880380  T
Q  172 aacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||||||| ||||||||||||||||||    
T  3880379 aacactttcatcatagtggattggagagctgctc 3880346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 205
Target Start/End: Original strand, 28807485 - 28807610
Alignment:
Q  76 gggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaa-gcttgaaagctattgtttcttgtaaccctttgtaac 174  Q
    ||||||||| |||||||||||| ||| ||  | ||||||| ||||||| |||||  ||||||| ||||||||||||  | ||||||||||| ||||||||    
T  28807485 gggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagcta--gattcttgtaaccttttgtaac 28807581  T
Q  175 actttcatcatattggattggagagctgctc 205  Q
    |||| || |||||||||||||||||||||||    
T  28807582 actt-ca-catattggattggagagctgctc 28807610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 17003809 - 17004010
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatc-taaagcttcctctagtgtcttctcttttagggttcatattgtgagagtgggga 99  Q
    |||||||| ||||||||||||||| ||  ||||||||||||| |||  |||||||||| | |||| |||||  ||||| ||||||||||||||||| |      
T  17003809 cattgtaaacaccttgggtagtga-gatttcaccattggaaggatcaaaaagcttccttttgtgttttctc--ttaggattcatattgtgagagtgagtg 17003905  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggaga 198  Q
    ||     ||||||||||  |||| |||||| ||||||||||||| ||| ||   ||| ||||||| | |||| || |||||||||||| ||||||| |||    
T  17003906 aaattaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagtta--attttttgtaactcttttgaaatactttcatcatagtggattgaaga 17004003  T
Q  199 gctgctc 205  Q
    |||||||    
T  17004004 gctgctc 17004010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 31300549 - 31300640
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||||||||  |||| |||||| ||||||||||||| || ||||| ||||||| ||| | || ||||||||||||| || ||||||||||||    
T  31300549 atgggtagaaattaggacttgttcttgtgtaagcttgcaaactatt-tttcttgcaactcattataacactttcatcttagtggattggagag 31300640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 37556613 - 37556660
Alignment:
Q  157 cttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  37556613 cttgtaaccttttgtaacactttca-catattggattggagagctgctc 37556660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 37561435 - 37561482
Alignment:
Q  157 cttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  37561435 cttgtaaccttttgtaacactttca-catattggattggagagctgctc 37561482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 19588888 - 19588793
Alignment:
Q  109 gggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaac-cctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||  |||| |||||| ||||||||||||  ||| ||   ||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  19588888 gggtagaaattaggtcttgttcttgtgtaagcttataaggta--atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctc 19588793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 28832357 - 28832306
Alignment:
Q  154 tttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| | |||||||||||||||| || |||||||||| |||||||    
T  28832357 tttcttgtaactcattgtaacactttcatcttagtggattggagggctgctc 28832306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 42127364 - 42127460
Alignment:
Q  107 atgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||  |||| |||||| || |||||||||  |||||| |  |||||||||| | |||||||||||||||| || |||||||| | |||||||    
T  42127364 atgggtagaaagtaggacttgttcttttgtaagcttataagctaat--ttcttgtaactcattgtaacactttcatcttagtggattggggggctgctc 42127460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 141; Significance: 4e-74; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 17800 - 18002
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    ||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17800 cattgtaatcaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggggaa 17898  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||| | |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  17899 acacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 17997  T
Q  201 tgctc 205  Q
    |||||    
T  17998 tgctc 18002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 23893 - 24095
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    ||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23893 cattgtaatcaccttgggtagtgag-atttcaccattggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatattgtgagagtggggaa 23991  T
Q  101 acacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagagc 200  Q
    ||||  |||||||||| ||| | |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  23992 acacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaagctatt-tttcttgtaaccctttgtaacactttcatcatagtggattggagagc 24090  T
Q  201 tgctc 205  Q
    |||||    
T  24091 tgctc 24095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 8267 - 8469
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||  |||||||||| | ||||||||||||||||||||||| |||| ||||||||| |    
T  8267 cattgtaaacaccttgggtagtgag-atttcaccattggaaggattaaaagcttccttttgtgtcttctcttttagggttcattattgagagagtggg-a 8364  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||  ||||||  |||| |||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  8365 aacacaaatacgtagaaattaggtcttgttcttgtgtaagcttgcaagctatt-tttcttgtaactctttgtaacactttcatcatagtggattggagag 8463  T
Q  200 ctgctc 205  Q
    ||||||    
T  8464 ctgctc 8469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 133129 - 133330
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| ||||||||| |||| ||||||||| |    
T  133129 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt-agggttcattattgagagagtggg-a 133225  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||  |||| |||||| ||||||||| ||| |||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||    
T  133226 aacacaaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatt-tttcttgtaactctttgtaacattttcatcatagtggattggagag 133324  T
Q  200 ctgctc 205  Q
    ||||||    
T  133325 ctgctc 133330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 2577 - 2540
Alignment:
Q  167 tttgtaacactttcatcatattggattggagagctgct 204  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  2577 tttgtaacactttcatcatagtggattggagggctgct 2540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 43811 - 44011
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| ||||||||| |||| ||||| | |||    
T  43811 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt-agggttcattattgagagagagtgga 43908  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    | |||  ||||||||||  |||| |||||| |||| |||||||| ||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||    
T  43909 a-cacaaatgggtagaaattaggtcttgttcttgtataagcttgcaagctatt--ttcttgtaactctttgtaacactttcatcatagtggattggagag 44005  T
Q  200 ctgctc 205  Q
    ||||||    
T  44006 ctgctc 44011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 36682 - 36882
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcat-attgtgagagtgggga 99  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | ||||||||||||| ||||||||| |||| ||||||||| |    
T  36682 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt-agggttcattattgagagagtggg-a 36778  T
Q  100 aacacgtatgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    |||||  ||||||||||   | | |||||| ||||||||||||| ||||||||  |||||||||| ||||||||||||||||||||| ||| |||| |||    
T  36779 aacacaaatgggtagaaatcatgtcttgttcttgtgtaagcttgcaagctatt--ttcttgtaactctttgtaacactttcatcatagtgggttggcgag 36876  T
Q  200 ctgctc 205  Q
    ||||||    
T  36877 ctgctc 36882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 34967 - 35100
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgt-aagcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||||||||||  | ||||||| ||||||| |||||  ||||| ||||||||| ||||  | ||||| ||||| |||    
T  34967 ttttagggttcatagtgtgagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttctaacctttt 35065  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35066 gtaacactttc-tcatattggattggagagctgctc 35100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 71 - 205
Target Start/End: Original strand, 9549 - 9680
Alignment:
Q  71 ttttagggttcatattgtgagagtggggaaacacgtatgggtagaatctagggcttgtttttgtgtaa-gcttgaaagctattgtttcttgtaacccttt 169  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||| ||||||| |||||  ||||||| ||||||| ||||  ||  ||||||||| |||    
T  9549 ttttagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaggctagagt--cttgtaacctttt 9645  T
Q  170 gtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9646 gtaacactttc-tcatattggattggagagctgctc 9680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 85930 - 85730
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttttagggttcatattgtgagagtggggaa 100  Q
    |||||||| ||| |||||||||||| |  ||||||||||||| ||| ||| |||||| | |||| || ||| ||||  ||||||||||| ||||||| |     
T  85930 cattgtaaacactttgggtagtgag-atttcaccattggaaggatcaaaaacttccttttgtgtttt-tctcttagaattcatattgtgggagtggg-ag 85834  T
Q  101 acacgta-tgggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaaccctttgtaacactttcatcatattggattggagag 199  Q
    ||||  | |||||||||  |||| |||| | ||||||||||||  |||||| |  |||||||||| ||||||||||||||||||||  ||||||||||||    
T  85833 acacaaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaat--ttcttgtaactctttgtaacactttcatcatggtggattggagag 85736  T
Q  200 ctgctc 205  Q
    | ||||    
T  85735 ccgctc 85730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 10861 - 10776
Alignment:
Q  119 tagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggagagctgctc 205  Q
    |||| |||||| ||||||||||||| || ||| |  |||||||||| |||| |||||||||||||| || ||||||||||||||||||    
T  10861 taggtcttgttcttgtgtaagcttgtaaactaat--ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctc 10776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45445 - 45374
Alignment:
Q  1 cattgtaatcaccttgggtagtgaggagctcaccattggaagaatctaaagcttcctctagtgtcttctcttt 73  Q
    |||||||| |||||||||||||||| |  ||||||||||||| ||| |||||||||| | |||||||||||||    
T  45445 cattgtaaacaccttgggtagtgag-atttcaccattggaaggatcaaaagcttccttttgtgtcttctcttt 45374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 45337 - 45300
Alignment:
Q  168 ttgtaacactttcatcatattggattggagagctgctc 205  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  45337 ttgtaacgctttcatcatagtggattggagagctgctc 45300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 17404 - 17318
Alignment:
Q  110 ggtagaatctagggcttgtttttgtgtaagcttgaaagctattgtttcttgtaacccttt-gtaacactttcatcatattggattggag 197  Q
    |||||||  |||| |||||| ||||||||||||  |||||| |  |||||||||| |||| ||||||||||||||||| ||||||||||    
T  17404 ggtagaaattaggtcttgttcttgtgtaagcttataagctaat--ttcttgtaactcttttgtaacactttcatcataatggattggag 17318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 457 - 410
Alignment:
Q  156 tcttgtaaccctttgtaacactttcatcatattggattggagagctgctc 205  Q
    |||||||||| |||||||||||| || |||||||||||||||||||||||    
T  457 tcttgtaaccttttgtaacactt-ca-catattggattggagagctgctc 410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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